####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 51 ( 390), selected 33 , name T0630TS471_1-D1 # Molecule2: number of CA atoms 99 ( 813), selected 33 , name T0630-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0630TS471_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 32 7 - 38 2.59 5.54 LCS_AVERAGE: 31.34 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 21 - 38 1.25 5.65 LCS_AVERAGE: 14.69 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 22 - 38 0.79 5.88 LCS_AVERAGE: 12.61 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 33 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT E 7 E 7 7 12 32 3 4 8 15 20 26 27 30 30 30 31 31 31 32 32 32 32 32 32 32 LCS_GDT P 8 P 8 10 12 32 4 17 26 27 27 28 28 30 30 30 31 31 31 32 32 32 32 32 32 32 LCS_GDT K 9 K 9 10 12 32 4 24 26 27 27 28 28 30 30 30 31 31 31 32 32 32 32 32 32 32 LCS_GDT P 10 P 10 10 12 32 14 24 26 27 27 28 28 30 30 30 31 31 31 32 32 32 32 32 32 32 LCS_GDT G 11 G 11 10 12 32 14 24 26 27 27 28 28 30 30 30 31 31 31 32 32 32 32 32 32 32 LCS_GDT D 12 D 12 10 12 32 14 24 26 27 27 28 28 30 30 30 31 31 31 32 32 32 32 32 32 32 LCS_GDT L 13 L 13 10 12 32 5 24 26 27 27 28 28 30 30 30 31 31 31 32 32 32 32 32 32 32 LCS_GDT I 14 I 14 10 12 32 13 24 26 27 27 28 28 30 30 30 31 31 31 32 32 32 32 32 32 32 LCS_GDT E 15 E 15 10 12 32 4 24 26 27 27 28 28 30 30 30 31 31 31 32 32 32 32 32 32 32 LCS_GDT I 16 I 16 10 12 32 5 24 26 27 27 28 28 30 30 30 31 31 31 32 32 32 32 32 32 32 LCS_GDT F 17 F 17 10 12 32 5 24 26 27 27 28 28 30 30 30 31 31 31 32 32 32 32 32 32 32 LCS_GDT R 18 R 18 4 12 32 3 4 10 12 21 26 28 30 30 30 31 31 31 32 32 32 32 32 32 32 LCS_GDT P 19 P 19 4 6 32 3 4 5 6 8 10 18 26 28 30 31 31 31 32 32 32 32 32 32 32 LCS_GDT F 20 F 20 4 6 32 3 4 5 6 6 6 6 8 10 11 15 23 31 32 32 32 32 32 32 32 LCS_GDT Y 21 Y 21 4 18 32 3 4 15 23 25 28 28 30 30 30 31 31 31 32 32 32 32 32 32 32 LCS_GDT R 22 R 22 17 18 32 8 21 26 27 27 28 28 30 30 30 31 31 31 32 32 32 32 32 32 32 LCS_GDT H 23 H 23 17 18 32 14 24 26 27 27 28 28 30 30 30 31 31 31 32 32 32 32 32 32 32 LCS_GDT W 24 W 24 17 18 32 14 24 26 27 27 28 28 30 30 30 31 31 31 32 32 32 32 32 32 32 LCS_GDT A 25 A 25 17 18 32 14 24 26 27 27 28 28 30 30 30 31 31 31 32 32 32 32 32 32 32 LCS_GDT I 26 I 26 17 18 32 14 24 26 27 27 28 28 30 30 30 31 31 31 32 32 32 32 32 32 32 LCS_GDT Y 27 Y 27 17 18 32 14 24 26 27 27 28 28 30 30 30 31 31 31 32 32 32 32 32 32 32 LCS_GDT V 28 V 28 17 18 32 14 24 26 27 27 28 28 30 30 30 31 31 31 32 32 32 32 32 32 32 LCS_GDT G 29 G 29 17 18 32 8 24 26 27 27 28 28 30 30 30 31 31 31 32 32 32 32 32 32 32 LCS_GDT D 30 D 30 17 18 32 14 24 26 27 27 28 28 30 30 30 31 31 31 32 32 32 32 32 32 32 LCS_GDT G 31 G 31 17 18 32 14 24 26 27 27 28 28 30 30 30 31 31 31 32 32 32 32 32 32 32 LCS_GDT Y 32 Y 32 17 18 32 14 24 26 27 27 28 28 30 30 30 31 31 31 32 32 32 32 32 32 32 LCS_GDT V 33 V 33 17 18 32 14 24 26 27 27 28 28 30 30 30 31 31 31 32 32 32 32 32 32 32 LCS_GDT V 34 V 34 17 18 32 14 24 26 27 27 28 28 30 30 30 31 31 31 32 32 32 32 32 32 32 LCS_GDT H 35 H 35 17 18 32 6 24 26 27 27 28 28 30 30 30 31 31 31 32 32 32 32 32 32 32 LCS_GDT L 36 L 36 17 18 32 8 24 26 27 27 28 28 30 30 30 31 31 31 32 32 32 32 32 32 32 LCS_GDT A 37 A 37 17 18 32 5 24 26 27 27 28 28 30 30 30 31 31 31 32 32 32 32 32 32 32 LCS_GDT P 38 P 38 17 18 32 0 13 24 27 27 28 28 30 30 30 31 31 31 32 32 32 32 32 32 32 LCS_GDT K 57 K 57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 13 15 15 16 16 16 17 19 LCS_AVERAGE LCS_A: 19.55 ( 12.61 14.69 31.34 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 14 24 26 27 27 28 28 30 30 30 31 31 31 32 32 32 32 32 32 32 GDT PERCENT_AT 14.14 24.24 26.26 27.27 27.27 28.28 28.28 30.30 30.30 30.30 31.31 31.31 31.31 32.32 32.32 32.32 32.32 32.32 32.32 32.32 GDT RMS_LOCAL 0.27 0.61 0.74 0.84 0.84 1.13 1.13 1.69 1.69 1.69 2.20 2.20 2.20 2.59 2.59 2.59 2.59 2.59 2.59 2.59 GDT RMS_ALL_AT 5.62 5.75 5.79 5.78 5.78 5.68 5.68 5.63 5.63 5.63 5.57 5.57 5.57 5.54 5.54 5.54 5.54 5.54 5.54 5.54 # Checking swapping # possible swapping detected: E 7 E 7 # possible swapping detected: F 17 F 17 # possible swapping detected: Y 21 Y 21 # possible swapping detected: Y 32 Y 32 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA E 7 E 7 4.131 0 0.651 1.278 11.923 54.048 26.402 LGA P 8 P 8 1.202 0 0.157 0.248 3.041 81.786 74.762 LGA K 9 K 9 0.847 0 0.095 1.275 7.271 90.476 65.661 LGA P 10 P 10 0.381 0 0.035 0.108 1.071 100.000 94.626 LGA G 11 G 11 0.288 0 0.049 0.049 0.488 100.000 100.000 LGA D 12 D 12 0.414 0 0.097 0.225 0.623 97.619 97.619 LGA L 13 L 13 1.110 0 0.063 0.161 1.499 81.429 81.429 LGA I 14 I 14 1.042 0 0.092 0.666 3.408 88.214 82.024 LGA E 15 E 15 1.575 0 0.168 0.968 4.422 72.976 62.222 LGA I 16 I 16 1.258 0 0.113 1.131 3.192 83.690 75.595 LGA F 17 F 17 1.793 0 0.408 0.774 11.711 71.071 32.121 LGA R 18 R 18 4.987 0 0.123 1.217 13.101 39.524 16.494 LGA P 19 P 19 8.556 0 0.265 0.271 10.933 4.048 2.517 LGA F 20 F 20 8.924 0 0.112 1.394 15.432 5.595 2.035 LGA Y 21 Y 21 3.265 0 0.620 0.770 8.664 51.071 33.492 LGA R 22 R 22 2.373 0 0.571 1.354 16.299 75.119 30.649 LGA H 23 H 23 0.370 0 0.083 0.281 2.323 100.000 85.571 LGA W 24 W 24 0.244 0 0.087 1.209 7.854 100.000 55.442 LGA A 25 A 25 0.580 0 0.035 0.063 0.919 97.619 96.190 LGA I 26 I 26 0.153 0 0.049 0.128 1.307 97.619 92.917 LGA Y 27 Y 27 0.314 0 0.086 0.298 0.713 97.619 96.032 LGA V 28 V 28 0.349 0 0.121 0.473 1.488 95.238 90.612 LGA G 29 G 29 0.794 0 0.074 0.074 0.794 92.857 92.857 LGA D 30 D 30 0.655 0 0.060 0.659 2.623 90.595 81.964 LGA G 31 G 31 0.885 0 0.210 0.210 1.767 83.810 83.810 LGA Y 32 Y 32 0.834 0 0.095 0.339 2.951 90.476 79.127 LGA V 33 V 33 0.574 0 0.042 1.284 3.537 90.476 80.068 LGA V 34 V 34 0.578 0 0.038 1.281 3.845 90.476 79.932 LGA H 35 H 35 0.885 0 0.026 0.472 3.118 95.238 78.000 LGA L 36 L 36 0.589 0 0.103 0.953 2.917 88.214 81.012 LGA A 37 A 37 1.171 0 0.162 0.178 1.502 85.952 83.333 LGA P 38 P 38 3.050 0 0.591 0.601 4.457 50.476 46.599 LGA K 57 K 57 28.398 0 0.096 0.735 29.627 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 33 132 132 100.00 277 277 100.00 99 SUMMARY(RMSD_GDC): 5.331 5.315 6.793 25.690 22.031 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 51 99 4.0 30 1.69 28.535 25.262 1.672 LGA_LOCAL RMSD: 1.695 Number of atoms: 30 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 5.628 Number of assigned atoms: 33 Std_ASGN_ATOMS RMSD: 5.331 Standard rmsd on all 33 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.837200 * X + 0.497668 * Y + 0.226765 * Z + -27.196880 Y_new = 0.389599 * X + -0.251731 * Y + -0.885914 * Z + 77.658882 Z_new = -0.383808 * X + 0.830035 * Y + -0.404640 * Z + 2.934150 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.435553 0.393916 2.024392 [DEG: 24.9554 22.5697 115.9891 ] ZXZ: 0.250587 1.987381 -0.433117 [DEG: 14.3576 113.8686 -24.8158 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0630TS471_1-D1 REMARK 2: T0630-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0630TS471_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 51 99 4.0 30 1.69 25.262 5.33 REMARK ---------------------------------------------------------- MOLECULE T0630TS471_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0630 REMARK MODEL 1 REMARK PARENT 3gt2_A ATOM 39 N GLU 7 -10.357 23.273 10.521 1.00 0.00 N ATOM 40 CA GLU 7 -11.590 23.995 10.637 1.00 0.00 C ATOM 41 CB GLU 7 -11.942 24.283 12.108 1.00 0.00 C ATOM 42 CG GLU 7 -13.419 24.617 12.337 1.00 0.00 C ATOM 43 CD GLU 7 -14.162 23.296 12.525 1.00 0.00 C ATOM 44 OE1 GLU 7 -13.770 22.528 13.443 1.00 0.00 O ATOM 45 OE2 GLU 7 -15.129 23.032 11.760 1.00 0.00 O ATOM 46 C GLU 7 -11.614 25.316 9.897 1.00 0.00 C ATOM 47 O GLU 7 -12.695 25.715 9.465 1.00 0.00 O ATOM 48 N PRO 8 -10.539 26.048 9.700 1.00 0.00 N ATOM 49 CA PRO 8 -10.716 27.380 9.204 1.00 0.00 C ATOM 50 CD PRO 8 -9.422 26.025 10.615 1.00 0.00 C ATOM 51 CB PRO 8 -9.408 28.130 9.426 1.00 0.00 C ATOM 52 CG PRO 8 -8.844 27.449 10.673 1.00 0.00 C ATOM 53 C PRO 8 -11.283 27.618 7.866 1.00 0.00 C ATOM 54 O PRO 8 -10.989 26.904 6.908 1.00 0.00 O ATOM 55 N LYS 9 -12.110 28.671 7.830 1.00 0.00 N ATOM 56 CA LYS 9 -12.715 29.183 6.653 1.00 0.00 C ATOM 57 CB LYS 9 -14.244 29.042 6.647 1.00 0.00 C ATOM 58 CG LYS 9 -14.953 29.731 7.809 1.00 0.00 C ATOM 59 CD LYS 9 -16.475 29.806 7.637 1.00 0.00 C ATOM 60 CE LYS 9 -17.179 30.486 8.820 1.00 0.00 C ATOM 61 NZ LYS 9 -18.656 30.492 8.659 1.00 0.00 N ATOM 62 C LYS 9 -12.319 30.623 6.635 1.00 0.00 C ATOM 63 O LYS 9 -11.761 31.123 7.610 1.00 0.00 O ATOM 64 N PRO 10 -12.556 31.319 5.566 1.00 0.00 N ATOM 65 CA PRO 10 -12.078 32.674 5.488 1.00 0.00 C ATOM 66 CD PRO 10 -12.637 30.697 4.255 1.00 0.00 C ATOM 67 CB PRO 10 -12.264 33.094 4.032 1.00 0.00 C ATOM 68 CG PRO 10 -12.143 31.763 3.265 1.00 0.00 C ATOM 69 C PRO 10 -12.743 33.565 6.482 1.00 0.00 C ATOM 70 O PRO 10 -13.928 33.373 6.756 1.00 0.00 O ATOM 71 N GLY 11 -11.998 34.547 7.032 1.00 0.00 N ATOM 72 CA GLY 11 -12.563 35.442 7.997 1.00 0.00 C ATOM 73 C GLY 11 -12.130 35.031 9.371 1.00 0.00 C ATOM 74 O GLY 11 -12.285 35.795 10.322 1.00 0.00 O ATOM 75 N ASP 12 -11.575 33.809 9.520 1.00 0.00 N ATOM 76 CA ASP 12 -11.125 33.384 10.818 1.00 0.00 C ATOM 77 CB ASP 12 -10.856 31.881 10.940 1.00 0.00 C ATOM 78 CG ASP 12 -12.210 31.212 11.080 1.00 0.00 C ATOM 79 OD1 ASP 12 -13.233 31.945 11.130 1.00 0.00 O ATOM 80 OD2 ASP 12 -12.239 29.954 11.157 1.00 0.00 O ATOM 81 C ASP 12 -9.844 34.076 11.121 1.00 0.00 C ATOM 82 O ASP 12 -9.178 34.597 10.227 1.00 0.00 O ATOM 83 N LEU 13 -9.463 34.089 12.414 1.00 0.00 N ATOM 84 CA LEU 13 -8.267 34.779 12.781 1.00 0.00 C ATOM 85 CB LEU 13 -8.480 35.740 13.956 1.00 0.00 C ATOM 86 CG LEU 13 -9.661 36.689 13.669 1.00 0.00 C ATOM 87 CD1 LEU 13 -9.754 37.830 14.690 1.00 0.00 C ATOM 88 CD2 LEU 13 -9.630 37.205 12.223 1.00 0.00 C ATOM 89 C LEU 13 -7.208 33.780 13.121 1.00 0.00 C ATOM 90 O LEU 13 -7.477 32.720 13.685 1.00 0.00 O ATOM 91 N ILE 14 -5.956 34.126 12.753 1.00 0.00 N ATOM 92 CA ILE 14 -4.794 33.300 12.917 1.00 0.00 C ATOM 93 CB ILE 14 -3.986 33.181 11.652 1.00 0.00 C ATOM 94 CG2 ILE 14 -2.655 32.470 11.982 1.00 0.00 C ATOM 95 CG1 ILE 14 -4.804 32.507 10.535 1.00 0.00 C ATOM 96 CD1 ILE 14 -4.192 32.682 9.146 1.00 0.00 C ATOM 97 C ILE 14 -3.897 34.007 13.885 1.00 0.00 C ATOM 98 O ILE 14 -3.763 35.230 13.842 1.00 0.00 O ATOM 99 N GLU 15 -3.259 33.253 14.803 1.00 0.00 N ATOM 100 CA GLU 15 -2.385 33.915 15.728 1.00 0.00 C ATOM 101 CB GLU 15 -2.923 33.952 17.170 1.00 0.00 C ATOM 102 CG GLU 15 -4.102 34.905 17.376 1.00 0.00 C ATOM 103 CD GLU 15 -5.415 34.143 17.303 1.00 0.00 C ATOM 104 OE1 GLU 15 -5.911 33.829 16.191 1.00 0.00 O ATOM 105 OE2 GLU 15 -5.945 33.879 18.418 1.00 0.00 O ATOM 106 C GLU 15 -1.058 33.211 15.744 1.00 0.00 C ATOM 107 O GLU 15 -0.958 32.038 15.389 1.00 0.00 O ATOM 108 N ILE 16 0.018 33.937 16.127 1.00 0.00 N ATOM 109 CA ILE 16 1.298 33.282 16.193 1.00 0.00 C ATOM 110 CB ILE 16 2.211 33.486 15.013 1.00 0.00 C ATOM 111 CG2 ILE 16 1.580 32.754 13.822 1.00 0.00 C ATOM 112 CG1 ILE 16 2.518 34.968 14.753 1.00 0.00 C ATOM 113 CD1 ILE 16 1.293 35.750 14.279 1.00 0.00 C ATOM 114 C ILE 16 2.047 33.619 17.446 1.00 0.00 C ATOM 115 O ILE 16 1.853 34.669 18.056 1.00 0.00 O ATOM 116 N PHE 17 2.913 32.671 17.867 1.00 0.00 N ATOM 117 CA PHE 17 3.731 32.774 19.041 1.00 0.00 C ATOM 118 CB PHE 17 4.282 34.165 19.398 1.00 0.00 C ATOM 119 CG PHE 17 5.701 34.193 18.943 1.00 0.00 C ATOM 120 CD1 PHE 17 6.053 34.138 17.613 1.00 0.00 C ATOM 121 CD2 PHE 17 6.705 34.293 19.883 1.00 0.00 C ATOM 122 CE1 PHE 17 7.378 34.172 17.246 1.00 0.00 C ATOM 123 CE2 PHE 17 8.029 34.329 19.518 1.00 0.00 C ATOM 124 CZ PHE 17 8.368 34.268 18.192 1.00 0.00 C ATOM 125 C PHE 17 3.063 32.178 20.214 1.00 0.00 C ATOM 126 O PHE 17 1.929 31.699 20.126 1.00 0.00 O ATOM 127 N ARG 18 3.800 32.183 21.343 1.00 0.00 N ATOM 128 CA ARG 18 3.317 31.666 22.585 1.00 0.00 C ATOM 129 CB ARG 18 4.285 31.926 23.749 1.00 0.00 C ATOM 130 CG ARG 18 5.632 31.210 23.575 1.00 0.00 C ATOM 131 CD ARG 18 6.391 31.627 22.311 1.00 0.00 C ATOM 132 NE ARG 18 7.799 31.906 22.703 1.00 0.00 N ATOM 133 CZ ARG 18 8.760 30.942 22.598 1.00 0.00 C ATOM 134 NH1 ARG 18 8.464 29.706 22.095 1.00 0.00 N ATOM 135 NH2 ARG 18 10.041 31.235 22.959 1.00 0.00 N ATOM 136 C ARG 18 2.067 32.426 22.750 1.00 0.00 C ATOM 137 O ARG 18 2.031 33.585 22.345 1.00 0.00 O ATOM 138 N PRO 19 1.116 31.814 23.407 1.00 0.00 N ATOM 139 CA PRO 19 -0.287 32.134 23.281 1.00 0.00 C ATOM 140 CD PRO 19 1.431 31.224 24.699 1.00 0.00 C ATOM 141 CB PRO 19 -0.887 31.932 24.676 1.00 0.00 C ATOM 142 CG PRO 19 0.080 30.949 25.367 1.00 0.00 C ATOM 143 C PRO 19 -0.644 33.447 22.649 1.00 0.00 C ATOM 144 O PRO 19 -0.918 34.433 23.327 1.00 0.00 O ATOM 145 N PHE 20 -0.589 33.415 21.294 1.00 0.00 N ATOM 146 CA PHE 20 -0.954 34.412 20.321 1.00 0.00 C ATOM 147 CB PHE 20 -2.483 34.591 20.151 1.00 0.00 C ATOM 148 CG PHE 20 -3.127 35.118 21.388 1.00 0.00 C ATOM 149 CD1 PHE 20 -3.565 34.272 22.379 1.00 0.00 C ATOM 150 CD2 PHE 20 -3.304 36.472 21.544 1.00 0.00 C ATOM 151 CE1 PHE 20 -4.161 34.775 23.513 1.00 0.00 C ATOM 152 CE2 PHE 20 -3.900 36.980 22.672 1.00 0.00 C ATOM 153 CZ PHE 20 -4.324 36.131 23.665 1.00 0.00 C ATOM 154 C PHE 20 -0.291 35.734 20.582 1.00 0.00 C ATOM 155 O PHE 20 -0.808 36.776 20.200 1.00 0.00 O ATOM 156 N TYR 21 0.897 35.722 21.220 1.00 0.00 N ATOM 157 CA TYR 21 1.585 36.936 21.570 1.00 0.00 C ATOM 158 CB TYR 21 2.774 36.679 22.510 1.00 0.00 C ATOM 159 CG TYR 21 3.392 38.003 22.791 1.00 0.00 C ATOM 160 CD1 TYR 21 2.858 38.822 23.760 1.00 0.00 C ATOM 161 CD2 TYR 21 4.496 38.434 22.092 1.00 0.00 C ATOM 162 CE1 TYR 21 3.416 40.047 24.038 1.00 0.00 C ATOM 163 CE2 TYR 21 5.061 39.658 22.364 1.00 0.00 C ATOM 164 CZ TYR 21 4.521 40.466 23.338 1.00 0.00 C ATOM 165 OH TYR 21 5.098 41.722 23.615 1.00 0.00 O ATOM 166 C TYR 21 2.153 37.649 20.378 1.00 0.00 C ATOM 167 O TYR 21 2.017 38.867 20.249 1.00 0.00 O ATOM 168 N ARG 22 2.817 36.902 19.473 1.00 0.00 N ATOM 169 CA ARG 22 3.565 37.519 18.417 1.00 0.00 C ATOM 170 CB ARG 22 4.359 36.538 17.551 1.00 0.00 C ATOM 171 CG ARG 22 5.253 37.263 16.544 1.00 0.00 C ATOM 172 CD ARG 22 6.125 36.367 15.668 1.00 0.00 C ATOM 173 NE ARG 22 6.888 37.281 14.771 1.00 0.00 N ATOM 174 CZ ARG 22 8.174 36.968 14.435 1.00 0.00 C ATOM 175 NH1 ARG 22 8.710 35.800 14.892 1.00 0.00 N ATOM 176 NH2 ARG 22 8.919 37.806 13.652 1.00 0.00 N ATOM 177 C ARG 22 2.716 38.286 17.473 1.00 0.00 C ATOM 178 O ARG 22 3.011 39.449 17.202 1.00 0.00 O ATOM 179 N HIS 23 1.633 37.693 16.945 1.00 0.00 N ATOM 180 CA HIS 23 0.964 38.507 15.981 1.00 0.00 C ATOM 181 ND1 HIS 23 1.608 41.141 14.072 1.00 0.00 N ATOM 182 CG HIS 23 1.382 39.803 13.819 1.00 0.00 C ATOM 183 CB HIS 23 1.829 38.688 14.717 1.00 0.00 C ATOM 184 NE2 HIS 23 0.515 41.041 12.139 1.00 0.00 N ATOM 185 CD2 HIS 23 0.715 39.762 12.634 1.00 0.00 C ATOM 186 CE1 HIS 23 1.069 41.833 13.039 1.00 0.00 C ATOM 187 C HIS 23 -0.352 37.877 15.639 1.00 0.00 C ATOM 188 O HIS 23 -0.697 36.810 16.144 1.00 0.00 O ATOM 189 N TRP 24 -1.138 38.554 14.782 1.00 0.00 N ATOM 190 CA TRP 24 -2.455 38.107 14.429 1.00 0.00 C ATOM 191 CB TRP 24 -3.489 38.829 15.283 1.00 0.00 C ATOM 192 CG TRP 24 -3.182 40.301 15.403 1.00 0.00 C ATOM 193 CD2 TRP 24 -2.253 40.828 16.365 1.00 0.00 C ATOM 194 CD1 TRP 24 -3.654 41.365 14.694 1.00 0.00 C ATOM 195 NE1 TRP 24 -3.090 42.528 15.163 1.00 0.00 N ATOM 196 CE2 TRP 24 -2.224 42.207 16.192 1.00 0.00 C ATOM 197 CE3 TRP 24 -1.493 40.202 17.315 1.00 0.00 C ATOM 198 CZ2 TRP 24 -1.419 42.993 16.972 1.00 0.00 C ATOM 199 CZ3 TRP 24 -0.689 41.001 18.101 1.00 0.00 C ATOM 200 CH2 TRP 24 -0.654 42.371 17.935 1.00 0.00 C ATOM 201 C TRP 24 -2.707 38.468 12.998 1.00 0.00 C ATOM 202 O TRP 24 -2.037 39.354 12.471 1.00 0.00 O ATOM 203 N ALA 25 -3.658 37.775 12.324 1.00 0.00 N ATOM 204 CA ALA 25 -3.965 38.109 10.954 1.00 0.00 C ATOM 205 CB ALA 25 -2.935 37.618 9.935 1.00 0.00 C ATOM 206 C ALA 25 -5.269 37.481 10.575 1.00 0.00 C ATOM 207 O ALA 25 -5.849 36.717 11.344 1.00 0.00 O ATOM 208 N ILE 26 -5.779 37.796 9.363 1.00 0.00 N ATOM 209 CA ILE 26 -7.021 37.179 8.997 1.00 0.00 C ATOM 210 CB ILE 26 -8.096 38.095 8.498 1.00 0.00 C ATOM 211 CG2 ILE 26 -7.725 38.539 7.070 1.00 0.00 C ATOM 212 CG1 ILE 26 -9.447 37.355 8.593 1.00 0.00 C ATOM 213 CD1 ILE 26 -10.693 38.225 8.395 1.00 0.00 C ATOM 214 C ILE 26 -6.769 36.201 7.895 1.00 0.00 C ATOM 215 O ILE 26 -5.961 36.443 6.999 1.00 0.00 O ATOM 216 N TYR 27 -7.457 35.045 7.946 1.00 0.00 N ATOM 217 CA TYR 27 -7.259 34.033 6.947 1.00 0.00 C ATOM 218 CB TYR 27 -7.449 32.625 7.547 1.00 0.00 C ATOM 219 CG TYR 27 -7.395 31.552 6.521 1.00 0.00 C ATOM 220 CD1 TYR 27 -6.217 31.192 5.906 1.00 0.00 C ATOM 221 CD2 TYR 27 -8.548 30.871 6.211 1.00 0.00 C ATOM 222 CE1 TYR 27 -6.194 30.177 4.975 1.00 0.00 C ATOM 223 CE2 TYR 27 -8.529 29.857 5.283 1.00 0.00 C ATOM 224 CZ TYR 27 -7.358 29.511 4.658 1.00 0.00 C ATOM 225 OH TYR 27 -7.345 28.468 3.705 1.00 0.00 O ATOM 226 C TYR 27 -8.238 34.278 5.835 1.00 0.00 C ATOM 227 O TYR 27 -9.446 34.294 6.048 1.00 0.00 O ATOM 228 N VAL 28 -7.705 34.553 4.622 1.00 0.00 N ATOM 229 CA VAL 28 -8.429 34.823 3.401 1.00 0.00 C ATOM 230 CB VAL 28 -7.571 35.442 2.341 1.00 0.00 C ATOM 231 CG1 VAL 28 -8.336 35.446 1.007 1.00 0.00 C ATOM 232 CG2 VAL 28 -7.177 36.843 2.835 1.00 0.00 C ATOM 233 C VAL 28 -8.988 33.566 2.836 1.00 0.00 C ATOM 234 O VAL 28 -10.002 33.569 2.137 1.00 0.00 O ATOM 235 N GLY 29 -8.286 32.455 3.103 1.00 0.00 N ATOM 236 CA GLY 29 -8.639 31.190 2.542 1.00 0.00 C ATOM 237 C GLY 29 -7.657 30.958 1.444 1.00 0.00 C ATOM 238 O GLY 29 -7.005 31.892 0.979 1.00 0.00 O ATOM 239 N ASP 30 -7.528 29.695 1.004 1.00 0.00 N ATOM 240 CA ASP 30 -6.657 29.405 -0.087 1.00 0.00 C ATOM 241 CB ASP 30 -7.050 30.224 -1.322 1.00 0.00 C ATOM 242 CG ASP 30 -6.664 29.453 -2.571 1.00 0.00 C ATOM 243 OD1 ASP 30 -6.271 28.260 -2.465 1.00 0.00 O ATOM 244 OD2 ASP 30 -6.780 30.063 -3.665 1.00 0.00 O ATOM 245 C ASP 30 -5.255 29.762 0.319 1.00 0.00 C ATOM 246 O ASP 30 -4.450 30.203 -0.501 1.00 0.00 O ATOM 247 N GLY 31 -4.946 29.588 1.623 1.00 0.00 N ATOM 248 CA GLY 31 -3.619 29.755 2.150 1.00 0.00 C ATOM 249 C GLY 31 -3.191 31.183 2.092 1.00 0.00 C ATOM 250 O GLY 31 -2.002 31.455 1.930 1.00 0.00 O ATOM 251 N TYR 32 -4.142 32.127 2.231 1.00 0.00 N ATOM 252 CA TYR 32 -3.823 33.526 2.181 1.00 0.00 C ATOM 253 CB TYR 32 -4.591 34.300 1.103 1.00 0.00 C ATOM 254 CG TYR 32 -3.823 34.228 -0.164 1.00 0.00 C ATOM 255 CD1 TYR 32 -3.844 33.121 -0.974 1.00 0.00 C ATOM 256 CD2 TYR 32 -3.068 35.316 -0.534 1.00 0.00 C ATOM 257 CE1 TYR 32 -3.110 33.121 -2.139 1.00 0.00 C ATOM 258 CE2 TYR 32 -2.338 35.317 -1.694 1.00 0.00 C ATOM 259 CZ TYR 32 -2.360 34.216 -2.507 1.00 0.00 C ATOM 260 OH TYR 32 -1.610 34.215 -3.704 1.00 0.00 O ATOM 261 C TYR 32 -4.162 34.153 3.487 1.00 0.00 C ATOM 262 O TYR 32 -5.059 33.708 4.200 1.00 0.00 O ATOM 263 N VAL 33 -3.406 35.206 3.847 1.00 0.00 N ATOM 264 CA VAL 33 -3.683 35.863 5.086 1.00 0.00 C ATOM 265 CB VAL 33 -2.731 35.459 6.170 1.00 0.00 C ATOM 266 CG1 VAL 33 -1.374 36.137 5.891 1.00 0.00 C ATOM 267 CG2 VAL 33 -3.344 35.834 7.525 1.00 0.00 C ATOM 268 C VAL 33 -3.453 37.327 4.882 1.00 0.00 C ATOM 269 O VAL 33 -2.644 37.726 4.046 1.00 0.00 O ATOM 270 N VAL 34 -4.175 38.193 5.621 1.00 0.00 N ATOM 271 CA VAL 34 -3.801 39.574 5.511 1.00 0.00 C ATOM 272 CB VAL 34 -4.924 40.587 5.432 1.00 0.00 C ATOM 273 CG1 VAL 34 -5.824 40.264 4.227 1.00 0.00 C ATOM 274 CG2 VAL 34 -5.652 40.693 6.782 1.00 0.00 C ATOM 275 C VAL 34 -3.020 39.850 6.758 1.00 0.00 C ATOM 276 O VAL 34 -3.437 39.489 7.857 1.00 0.00 O ATOM 277 N HIS 35 -1.841 40.480 6.624 1.00 0.00 N ATOM 278 CA HIS 35 -1.038 40.655 7.799 1.00 0.00 C ATOM 279 ND1 HIS 35 1.035 39.328 5.453 1.00 0.00 N ATOM 280 CG HIS 35 1.082 39.999 6.664 1.00 0.00 C ATOM 281 CB HIS 35 0.176 39.724 7.825 1.00 0.00 C ATOM 282 NE2 HIS 35 2.626 40.872 5.270 1.00 0.00 N ATOM 283 CD2 HIS 35 2.058 40.931 6.529 1.00 0.00 C ATOM 284 CE1 HIS 35 1.976 39.892 4.660 1.00 0.00 C ATOM 285 C HIS 35 -0.465 42.025 7.798 1.00 0.00 C ATOM 286 O HIS 35 -0.600 42.774 6.832 1.00 0.00 O ATOM 287 N LEU 36 0.198 42.384 8.914 1.00 0.00 N ATOM 288 CA LEU 36 0.797 43.676 8.949 1.00 0.00 C ATOM 289 CB LEU 36 0.710 44.402 10.301 1.00 0.00 C ATOM 290 CG LEU 36 -0.720 44.750 10.749 1.00 0.00 C ATOM 291 CD1 LEU 36 -1.499 43.503 11.187 1.00 0.00 C ATOM 292 CD2 LEU 36 -0.704 45.832 11.837 1.00 0.00 C ATOM 293 C LEU 36 2.254 43.526 8.694 1.00 0.00 C ATOM 294 O LEU 36 3.005 43.031 9.536 1.00 0.00 O ATOM 295 N ALA 37 2.650 43.932 7.481 1.00 0.00 N ATOM 296 CA ALA 37 4.004 44.105 7.053 1.00 0.00 C ATOM 297 CB ALA 37 4.204 43.932 5.540 1.00 0.00 C ATOM 298 C ALA 37 4.197 45.551 7.355 1.00 0.00 C ATOM 299 O ALA 37 3.437 46.077 8.170 1.00 0.00 O ATOM 300 N PRO 38 5.173 46.236 6.832 1.00 0.00 N ATOM 301 CA PRO 38 5.195 47.641 7.104 1.00 0.00 C ATOM 302 CD PRO 38 6.497 45.697 6.565 1.00 0.00 C ATOM 303 CB PRO 38 6.534 48.142 6.569 1.00 0.00 C ATOM 304 CG PRO 38 7.449 46.901 6.703 1.00 0.00 C ATOM 305 C PRO 38 3.922 48.228 6.554 1.00 0.00 C ATOM 306 O PRO 38 3.304 49.040 7.243 1.00 0.00 O ATOM 307 N PRO 39 3.533 47.868 5.354 1.00 0.00 N ATOM 308 CA PRO 39 2.202 48.200 4.928 1.00 0.00 C ATOM 309 CD PRO 39 4.473 48.012 4.249 1.00 0.00 C ATOM 310 CB PRO 39 2.291 48.658 3.478 1.00 0.00 C ATOM 311 CG PRO 39 3.618 48.081 2.980 1.00 0.00 C ATOM 312 C PRO 39 1.370 46.967 5.092 1.00 0.00 C ATOM 313 O PRO 39 1.927 45.903 5.359 1.00 0.00 O ATOM 314 N SER 40 0.038 47.074 4.925 1.00 0.00 N ATOM 315 CA SER 40 -0.748 45.884 4.988 1.00 0.00 C ATOM 316 CB SER 40 -2.269 46.117 4.884 1.00 0.00 C ATOM 317 OG SER 40 -2.716 46.921 5.966 1.00 0.00 O ATOM 318 C SER 40 -0.361 45.097 3.787 1.00 0.00 C ATOM 319 O SER 40 -0.046 45.658 2.737 1.00 0.00 O ATOM 320 N GLU 41 -0.339 43.761 3.918 1.00 0.00 N ATOM 321 CA GLU 41 0.000 42.968 2.778 1.00 0.00 C ATOM 322 CB GLU 41 1.473 42.523 2.688 1.00 0.00 C ATOM 323 CG GLU 41 2.490 43.550 2.192 1.00 0.00 C ATOM 324 CD GLU 41 3.820 42.810 2.055 1.00 0.00 C ATOM 325 OE1 GLU 41 4.559 42.680 3.069 1.00 0.00 O ATOM 326 OE2 GLU 41 4.097 42.337 0.923 1.00 0.00 O ATOM 327 C GLU 41 -0.726 41.677 2.884 1.00 0.00 C ATOM 328 O GLU 41 -0.991 41.181 3.977 1.00 0.00 O ATOM 329 N VAL 42 -1.088 41.097 1.728 1.00 0.00 N ATOM 330 CA VAL 42 -1.642 39.787 1.806 1.00 0.00 C ATOM 331 CB VAL 42 -2.712 39.482 0.798 1.00 0.00 C ATOM 332 CG1 VAL 42 -3.072 37.989 0.893 1.00 0.00 C ATOM 333 CG2 VAL 42 -3.909 40.403 1.075 1.00 0.00 C ATOM 334 C VAL 42 -0.485 38.889 1.548 1.00 0.00 C ATOM 335 O VAL 42 0.303 39.117 0.631 1.00 0.00 O ATOM 336 N ALA 43 -0.325 37.853 2.384 1.00 0.00 N ATOM 337 CA ALA 43 0.792 36.998 2.153 1.00 0.00 C ATOM 338 CB ALA 43 2.008 37.312 3.042 1.00 0.00 C ATOM 339 C ALA 43 0.348 35.603 2.415 1.00 0.00 C ATOM 340 O ALA 43 -0.704 35.369 3.007 1.00 0.00 O ATOM 341 N GLY 44 1.141 34.631 1.929 1.00 0.00 N ATOM 342 CA GLY 44 0.765 33.269 2.134 1.00 0.00 C ATOM 343 C GLY 44 0.867 33.064 3.600 1.00 0.00 C ATOM 344 O GLY 44 1.610 33.772 4.276 1.00 0.00 O ATOM 345 N ALA 45 0.117 32.089 4.137 1.00 0.00 N ATOM 346 CA ALA 45 0.172 31.894 5.551 1.00 0.00 C ATOM 347 CB ALA 45 -0.910 30.955 6.096 1.00 0.00 C ATOM 348 C ALA 45 1.501 31.314 5.896 1.00 0.00 C ATOM 349 O ALA 45 2.189 30.715 5.070 1.00 0.00 O ATOM 350 N GLY 46 1.922 31.543 7.149 1.00 0.00 N ATOM 351 CA GLY 46 3.132 30.959 7.627 1.00 0.00 C ATOM 352 C GLY 46 2.682 29.999 8.680 1.00 0.00 C ATOM 353 O GLY 46 2.120 30.407 9.697 1.00 0.00 O ATOM 354 N ALA 47 2.887 28.690 8.439 1.00 0.00 N ATOM 355 CA ALA 47 2.481 27.664 9.360 1.00 0.00 C ATOM 356 CB ALA 47 2.650 26.245 8.792 1.00 0.00 C ATOM 357 C ALA 47 3.298 27.755 10.602 1.00 0.00 C ATOM 358 O ALA 47 2.795 27.578 11.709 1.00 0.00 O ATOM 359 N ALA 48 4.597 28.058 10.435 1.00 0.00 N ATOM 360 CA ALA 48 5.513 28.042 11.537 1.00 0.00 C ATOM 361 CB ALA 48 6.950 28.394 11.121 1.00 0.00 C ATOM 362 C ALA 48 5.098 29.013 12.595 1.00 0.00 C ATOM 363 O ALA 48 4.662 30.131 12.314 1.00 0.00 O ATOM 364 N SER 49 5.240 28.567 13.858 1.00 0.00 N ATOM 365 CA SER 49 5.000 29.318 15.061 1.00 0.00 C ATOM 366 CB SER 49 5.889 30.569 15.204 1.00 0.00 C ATOM 367 OG SER 49 5.404 31.613 14.374 1.00 0.00 O ATOM 368 C SER 49 3.578 29.765 15.160 1.00 0.00 C ATOM 369 O SER 49 3.273 30.693 15.904 1.00 0.00 O ATOM 370 N VAL 50 2.652 29.107 14.441 1.00 0.00 N ATOM 371 CA VAL 50 1.295 29.545 14.552 1.00 0.00 C ATOM 372 CB VAL 50 0.409 29.155 13.409 1.00 0.00 C ATOM 373 CG1 VAL 50 0.430 27.626 13.245 1.00 0.00 C ATOM 374 CG2 VAL 50 -0.985 29.744 13.685 1.00 0.00 C ATOM 375 C VAL 50 0.737 28.978 15.811 1.00 0.00 C ATOM 376 O VAL 50 1.142 27.903 16.249 1.00 0.00 O ATOM 377 N MET 51 -0.192 29.719 16.443 1.00 0.00 N ATOM 378 CA MET 51 -0.778 29.313 17.685 1.00 0.00 C ATOM 379 CB MET 51 -1.550 30.473 18.358 1.00 0.00 C ATOM 380 CG MET 51 -1.901 30.276 19.836 1.00 0.00 C ATOM 381 SD MET 51 -3.393 29.286 20.147 1.00 0.00 S ATOM 382 CE MET 51 -3.371 29.465 21.956 1.00 0.00 C ATOM 383 C MET 51 -1.666 28.151 17.377 1.00 0.00 C ATOM 384 O MET 51 -2.102 27.982 16.241 1.00 0.00 O ATOM 385 N SER 52 -1.947 27.320 18.401 1.00 0.00 N ATOM 386 CA SER 52 -2.620 26.068 18.228 1.00 0.00 C ATOM 387 CB SER 52 -2.708 25.237 19.523 1.00 0.00 C ATOM 388 OG SER 52 -3.501 25.901 20.498 1.00 0.00 O ATOM 389 C SER 52 -4.000 26.250 17.714 1.00 0.00 C ATOM 390 O SER 52 -4.468 25.426 16.926 1.00 0.00 O ATOM 391 N ALA 53 -4.699 27.323 18.116 1.00 0.00 N ATOM 392 CA ALA 53 -6.049 27.346 17.658 1.00 0.00 C ATOM 393 CB ALA 53 -7.058 27.201 18.802 1.00 0.00 C ATOM 394 C ALA 53 -6.326 28.639 16.980 1.00 0.00 C ATOM 395 O ALA 53 -5.728 29.666 17.290 1.00 0.00 O ATOM 396 N LEU 54 -7.242 28.589 15.995 1.00 0.00 N ATOM 397 CA LEU 54 -7.642 29.758 15.271 1.00 0.00 C ATOM 398 CB LEU 54 -7.970 29.478 13.800 1.00 0.00 C ATOM 399 CG LEU 54 -6.782 28.856 13.051 1.00 0.00 C ATOM 400 CD1 LEU 54 -5.558 29.783 13.089 1.00 0.00 C ATOM 401 CD2 LEU 54 -6.501 27.423 13.540 1.00 0.00 C ATOM 402 C LEU 54 -8.901 30.217 15.920 1.00 0.00 C ATOM 403 O LEU 54 -9.570 29.429 16.584 1.00 0.00 O ATOM 404 N THR 55 -9.266 31.506 15.765 1.00 0.00 N ATOM 405 CA THR 55 -10.465 31.933 16.427 1.00 0.00 C ATOM 406 CB THR 55 -10.316 33.213 17.188 1.00 0.00 C ATOM 407 OG1 THR 55 -9.967 34.264 16.299 1.00 0.00 O ATOM 408 CG2 THR 55 -9.226 33.038 18.257 1.00 0.00 C ATOM 409 C THR 55 -11.520 32.198 15.410 1.00 0.00 C ATOM 410 O THR 55 -11.253 32.775 14.358 1.00 0.00 O ATOM 411 N ASP 56 -12.755 31.746 15.695 1.00 0.00 N ATOM 412 CA ASP 56 -13.842 32.023 14.804 1.00 0.00 C ATOM 413 CB ASP 56 -14.463 30.773 14.147 1.00 0.00 C ATOM 414 CG ASP 56 -15.168 29.939 15.211 1.00 0.00 C ATOM 415 OD1 ASP 56 -14.629 29.821 16.345 1.00 0.00 O ATOM 416 OD2 ASP 56 -16.263 29.402 14.906 1.00 0.00 O ATOM 417 C ASP 56 -14.919 32.668 15.615 1.00 0.00 C ATOM 418 O ASP 56 -15.188 32.258 16.744 1.00 0.00 O ATOM 419 N LYS 57 -15.545 33.731 15.070 1.00 0.00 N ATOM 420 CA LYS 57 -16.630 34.295 15.809 1.00 0.00 C ATOM 421 CB LYS 57 -16.922 35.776 15.510 1.00 0.00 C ATOM 422 CG LYS 57 -17.912 36.410 16.496 1.00 0.00 C ATOM 423 CD LYS 57 -17.957 37.936 16.403 1.00 0.00 C ATOM 424 CE LYS 57 -19.045 38.605 17.252 1.00 0.00 C ATOM 425 NZ LYS 57 -18.472 39.097 18.524 1.00 0.00 N ATOM 426 C LYS 57 -17.863 33.502 15.387 1.00 0.00 C ATOM 427 O LYS 57 -18.401 33.798 14.285 1.00 0.00 O ATOM 428 OXT LYS 57 -18.274 32.580 16.142 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 277 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 51.20 71.4 63 32.6 193 ARMSMC SECONDARY STRUCTURE . . 54.55 69.0 42 38.9 108 ARMSMC SURFACE . . . . . . . . 75.84 60.0 25 20.7 121 ARMSMC BURIED . . . . . . . . 23.70 78.9 38 52.8 72 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 71.94 55.6 27 32.1 84 ARMSSC1 RELIABLE SIDE CHAINS . 63.63 62.5 24 32.0 75 ARMSSC1 SECONDARY STRUCTURE . . 75.63 50.0 18 36.0 50 ARMSSC1 SURFACE . . . . . . . . 70.21 50.0 12 21.8 55 ARMSSC1 BURIED . . . . . . . . 73.29 60.0 15 51.7 29 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 68.73 58.3 24 40.0 60 ARMSSC2 RELIABLE SIDE CHAINS . 69.32 60.0 20 43.5 46 ARMSSC2 SECONDARY STRUCTURE . . 69.75 53.3 15 40.5 37 ARMSSC2 SURFACE . . . . . . . . 71.14 58.3 12 29.3 41 ARMSSC2 BURIED . . . . . . . . 66.23 58.3 12 63.2 19 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 46.42 20.0 5 25.0 20 ARMSSC3 RELIABLE SIDE CHAINS . 46.42 20.0 5 27.8 18 ARMSSC3 SECONDARY STRUCTURE . . 51.27 0.0 3 25.0 12 ARMSSC3 SURFACE . . . . . . . . 38.52 25.0 4 25.0 16 ARMSSC3 BURIED . . . . . . . . 69.57 0.0 1 25.0 4 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 104.61 0.0 3 42.9 7 ARMSSC4 RELIABLE SIDE CHAINS . 104.61 0.0 3 42.9 7 ARMSSC4 SECONDARY STRUCTURE . . 100.68 0.0 2 40.0 5 ARMSSC4 SURFACE . . . . . . . . 104.61 0.0 3 50.0 6 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 1 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 5.33 (Number of atoms: 33) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 5.33 33 33.3 99 CRMSCA CRN = ALL/NP . . . . . 0.1616 CRMSCA SECONDARY STRUCTURE . . 2.42 21 38.9 54 CRMSCA SURFACE . . . . . . . . 7.80 14 22.2 63 CRMSCA BURIED . . . . . . . . 2.12 19 52.8 36 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 5.47 162 33.1 489 CRMSMC SECONDARY STRUCTURE . . 2.47 104 38.7 269 CRMSMC SURFACE . . . . . . . . 8.01 69 22.2 311 CRMSMC BURIED . . . . . . . . 2.13 93 52.2 178 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 7.93 145 34.8 417 CRMSSC RELIABLE SIDE CHAINS . 8.40 127 36.2 351 CRMSSC SECONDARY STRUCTURE . . 6.07 103 40.9 252 CRMSSC SURFACE . . . . . . . . 10.65 72 25.6 281 CRMSSC BURIED . . . . . . . . 3.63 73 53.7 136 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 6.81 277 34.1 813 CRMSALL SECONDARY STRUCTURE . . 4.75 187 40.0 468 CRMSALL SURFACE . . . . . . . . 9.50 128 24.0 533 CRMSALL BURIED . . . . . . . . 2.95 149 53.2 280 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.207 1.000 0.500 33 33.3 99 ERRCA SECONDARY STRUCTURE . . 2.206 1.000 0.500 21 38.9 54 ERRCA SURFACE . . . . . . . . 4.820 1.000 0.500 14 22.2 63 ERRCA BURIED . . . . . . . . 2.019 1.000 0.500 19 52.8 36 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.251 1.000 0.500 162 33.1 489 ERRMC SECONDARY STRUCTURE . . 2.221 1.000 0.500 104 38.7 269 ERRMC SURFACE . . . . . . . . 4.922 1.000 0.500 69 22.2 311 ERRMC BURIED . . . . . . . . 2.012 1.000 0.500 93 52.2 178 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 5.749 1.000 0.500 145 34.8 417 ERRSC RELIABLE SIDE CHAINS . 6.171 1.000 0.500 127 36.2 351 ERRSC SECONDARY STRUCTURE . . 4.594 1.000 0.500 103 40.9 252 ERRSC SURFACE . . . . . . . . 8.519 1.000 0.500 72 25.6 281 ERRSC BURIED . . . . . . . . 3.016 1.000 0.500 73 53.7 136 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.477 1.000 0.500 277 34.1 813 ERRALL SECONDARY STRUCTURE . . 3.471 1.000 0.500 187 40.0 468 ERRALL SURFACE . . . . . . . . 6.796 1.000 0.500 128 24.0 533 ERRALL BURIED . . . . . . . . 2.486 1.000 0.500 149 53.2 280 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 3 18 23 29 32 33 99 DISTCA CA (P) 3.03 18.18 23.23 29.29 32.32 99 DISTCA CA (RMS) 0.72 1.51 1.77 2.30 3.01 DISTCA ALL (N) 22 111 158 210 246 277 813 DISTALL ALL (P) 2.71 13.65 19.43 25.83 30.26 813 DISTALL ALL (RMS) 0.79 1.46 1.79 2.41 3.69 DISTALL END of the results output