####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 52 ( 395), selected 34 , name T0630TS296_1-D1 # Molecule2: number of CA atoms 99 ( 813), selected 34 , name T0630-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0630TS296_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 34 7 - 58 4.16 4.16 LCS_AVERAGE: 34.34 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 32 7 - 38 2.00 4.77 LCS_AVERAGE: 30.42 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 22 - 38 0.86 4.89 LCS_AVERAGE: 12.66 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 34 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT E 7 E 7 11 32 34 3 17 21 27 28 28 31 32 32 32 32 32 32 32 33 33 33 33 33 33 LCS_GDT P 8 P 8 11 32 34 17 22 25 27 28 28 31 32 32 32 32 32 32 32 33 33 33 33 33 33 LCS_GDT K 9 K 9 11 32 34 17 22 25 27 28 28 31 32 32 32 32 32 32 32 33 33 33 33 33 33 LCS_GDT P 10 P 10 11 32 34 9 22 25 27 28 28 31 32 32 32 32 32 32 32 33 33 33 33 33 33 LCS_GDT G 11 G 11 11 32 34 13 22 25 27 28 28 31 32 32 32 32 32 32 32 33 33 33 33 33 33 LCS_GDT D 12 D 12 11 32 34 17 22 25 27 28 28 31 32 32 32 32 32 32 32 33 33 33 33 33 33 LCS_GDT L 13 L 13 11 32 34 7 22 25 27 28 28 31 32 32 32 32 32 32 32 33 33 33 33 33 33 LCS_GDT I 14 I 14 11 32 34 7 20 25 27 28 28 31 32 32 32 32 32 32 32 33 33 33 33 33 33 LCS_GDT E 15 E 15 11 32 34 7 20 25 27 28 28 31 32 32 32 32 32 32 32 33 33 33 33 33 33 LCS_GDT I 16 I 16 11 32 34 6 22 25 27 28 28 31 32 32 32 32 32 32 32 33 33 33 33 33 33 LCS_GDT F 17 F 17 11 32 34 6 22 25 27 28 28 28 32 32 32 32 32 32 32 33 33 33 33 33 33 LCS_GDT R 18 R 18 4 32 34 4 4 11 16 23 28 31 32 32 32 32 32 32 32 33 33 33 33 33 33 LCS_GDT P 19 P 19 4 32 34 4 5 11 15 23 28 31 32 32 32 32 32 32 32 33 33 33 33 33 33 LCS_GDT F 20 F 20 4 32 34 4 4 5 12 23 28 31 32 32 32 32 32 32 32 33 33 33 33 33 33 LCS_GDT Y 21 Y 21 4 32 34 4 4 5 5 9 17 31 32 32 32 32 32 32 32 33 33 33 33 33 33 LCS_GDT R 22 R 22 17 32 34 11 21 25 27 28 28 31 32 32 32 32 32 32 32 33 33 33 33 33 33 LCS_GDT H 23 H 23 17 32 34 17 22 25 27 28 28 31 32 32 32 32 32 32 32 33 33 33 33 33 33 LCS_GDT W 24 W 24 17 32 34 17 22 25 27 28 28 31 32 32 32 32 32 32 32 33 33 33 33 33 33 LCS_GDT A 25 A 25 17 32 34 17 22 25 27 28 28 31 32 32 32 32 32 32 32 33 33 33 33 33 33 LCS_GDT I 26 I 26 17 32 34 17 22 25 27 28 28 31 32 32 32 32 32 32 32 33 33 33 33 33 33 LCS_GDT Y 27 Y 27 17 32 34 17 22 25 27 28 28 31 32 32 32 32 32 32 32 33 33 33 33 33 33 LCS_GDT V 28 V 28 17 32 34 17 22 25 27 28 28 31 32 32 32 32 32 32 32 33 33 33 33 33 33 LCS_GDT G 29 G 29 17 32 34 17 22 25 27 28 28 31 32 32 32 32 32 32 32 33 33 33 33 33 33 LCS_GDT D 30 D 30 17 32 34 17 22 25 27 28 28 31 32 32 32 32 32 32 32 33 33 33 33 33 33 LCS_GDT G 31 G 31 17 32 34 17 22 25 27 28 28 31 32 32 32 32 32 32 32 33 33 33 33 33 33 LCS_GDT Y 32 Y 32 17 32 34 17 22 25 27 28 28 31 32 32 32 32 32 32 32 33 33 33 33 33 33 LCS_GDT V 33 V 33 17 32 34 17 22 25 27 28 28 31 32 32 32 32 32 32 32 33 33 33 33 33 33 LCS_GDT V 34 V 34 17 32 34 17 22 25 27 28 28 31 32 32 32 32 32 32 32 33 33 33 33 33 33 LCS_GDT H 35 H 35 17 32 34 17 22 25 27 28 28 31 32 32 32 32 32 32 32 33 33 33 33 33 33 LCS_GDT L 36 L 36 17 32 34 17 22 25 27 28 28 31 32 32 32 32 32 32 32 33 33 33 33 33 33 LCS_GDT A 37 A 37 17 32 34 6 19 22 27 28 28 31 32 32 32 32 32 32 32 33 33 33 33 33 33 LCS_GDT P 38 P 38 17 32 34 6 13 21 25 28 28 31 32 32 32 32 32 32 32 33 33 33 33 33 33 LCS_GDT K 57 K 57 0 0 34 0 0 0 0 4 5 12 13 14 15 16 17 17 17 27 31 31 31 31 33 LCS_GDT A 58 A 58 0 0 34 0 1 4 4 9 11 13 15 22 25 27 28 30 32 33 33 33 33 33 33 LCS_AVERAGE LCS_A: 25.81 ( 12.66 30.42 34.34 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 17 22 25 27 28 28 31 32 32 32 32 32 32 32 33 33 33 33 33 33 GDT PERCENT_AT 17.17 22.22 25.25 27.27 28.28 28.28 31.31 32.32 32.32 32.32 32.32 32.32 32.32 32.32 33.33 33.33 33.33 33.33 33.33 33.33 GDT RMS_LOCAL 0.30 0.56 0.67 0.90 1.07 1.07 1.90 2.00 2.00 2.00 2.00 2.00 2.00 2.00 3.01 3.01 3.01 3.01 3.01 3.01 GDT RMS_ALL_AT 5.04 5.23 5.28 5.14 5.07 5.07 4.74 4.77 4.77 4.77 4.77 4.77 4.77 4.77 4.36 4.36 4.36 4.36 4.36 4.36 # Checking swapping # possible swapping detected: E 7 E 7 # possible swapping detected: E 15 E 15 # possible swapping detected: F 20 F 20 # possible swapping detected: Y 21 Y 21 # possible swapping detected: Y 32 Y 32 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA E 7 E 7 1.841 0 0.205 1.011 9.755 70.833 39.630 LGA P 8 P 8 0.658 0 0.048 0.050 1.186 90.476 87.891 LGA K 9 K 9 0.948 0 0.076 0.910 3.448 90.476 76.561 LGA P 10 P 10 1.324 0 0.041 0.371 2.513 79.286 75.510 LGA G 11 G 11 1.432 0 0.083 0.083 1.513 79.286 79.286 LGA D 12 D 12 1.037 0 0.104 0.198 1.046 83.690 88.274 LGA L 13 L 13 1.750 0 0.084 0.116 2.341 70.833 68.810 LGA I 14 I 14 2.043 0 0.105 0.129 2.301 68.810 69.821 LGA E 15 E 15 2.947 0 0.135 1.195 4.586 50.357 47.566 LGA I 16 I 16 2.970 0 0.162 1.110 4.898 61.071 50.952 LGA F 17 F 17 3.837 0 0.052 1.271 13.764 56.310 22.338 LGA R 18 R 18 3.528 0 0.600 0.943 12.129 52.857 23.030 LGA P 19 P 19 4.391 0 0.612 0.609 6.814 29.762 32.993 LGA F 20 F 20 3.722 0 0.551 0.454 5.637 43.452 34.069 LGA Y 21 Y 21 4.020 0 0.082 1.335 13.047 47.262 18.135 LGA R 22 R 22 2.552 0 0.629 1.206 13.629 64.881 28.874 LGA H 23 H 23 1.365 0 0.055 0.958 2.518 79.286 74.762 LGA W 24 W 24 0.837 0 0.111 1.273 8.799 90.476 50.272 LGA A 25 A 25 0.486 0 0.055 0.062 0.819 95.238 94.286 LGA I 26 I 26 0.493 0 0.055 1.044 2.650 97.619 83.512 LGA Y 27 Y 27 0.267 0 0.091 0.211 0.786 97.619 96.032 LGA V 28 V 28 0.445 0 0.167 0.475 2.352 86.548 83.265 LGA G 29 G 29 0.895 0 0.080 0.080 0.895 90.476 90.476 LGA D 30 D 30 0.421 0 0.041 0.082 1.002 97.619 92.917 LGA G 31 G 31 0.467 0 0.080 0.080 0.757 95.238 95.238 LGA Y 32 Y 32 0.716 0 0.055 0.127 1.701 92.857 85.357 LGA V 33 V 33 0.599 0 0.040 0.049 0.905 95.238 93.197 LGA V 34 V 34 0.381 0 0.046 1.200 2.701 100.000 87.755 LGA H 35 H 35 0.790 0 0.048 0.956 2.562 90.476 83.619 LGA L 36 L 36 1.171 0 0.095 0.173 2.906 83.690 74.286 LGA A 37 A 37 0.906 0 0.047 0.055 1.649 92.857 88.857 LGA P 38 P 38 1.396 0 0.188 0.399 3.106 71.190 64.150 LGA K 57 K 57 21.021 0 0.073 0.812 27.830 0.000 0.000 LGA A 58 A 58 14.245 0 0.126 0.171 17.032 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 34 136 136 100.00 282 282 100.00 99 SUMMARY(RMSD_GDC): 4.155 4.064 5.404 25.213 22.038 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 52 99 4.0 32 2.00 28.788 29.664 1.526 LGA_LOCAL RMSD: 1.997 Number of atoms: 32 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 4.766 Number of assigned atoms: 34 Std_ASGN_ATOMS RMSD: 4.155 Standard rmsd on all 34 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.687429 * X + -0.205744 * Y + 0.696499 * Z + 27.563116 Y_new = 0.684067 * X + 0.138658 * Y + 0.716118 * Z + -0.340242 Z_new = -0.243912 * X + 0.968733 * Y + 0.045425 * Z + 12.681273 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.358645 0.246398 1.523939 [DEG: 135.1404 14.1176 87.3153 ] ZXZ: 2.370082 1.525356 -0.246658 [DEG: 135.7957 87.3964 -14.1325 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0630TS296_1-D1 REMARK 2: T0630-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0630TS296_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 52 99 4.0 32 2.00 29.664 4.16 REMARK ---------------------------------------------------------- MOLECULE T0630TS296_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0630 REMARK MODEL 1 REMARK PARENT N/A ATOM 26 N GLU 7 -7.644 23.665 10.270 1.00 1.00 N ATOM 27 CA GLU 7 -8.903 24.090 9.727 1.00 1.00 C ATOM 28 C GLU 7 -9.180 25.521 10.036 1.00 1.00 C ATOM 29 O GLU 7 -9.846 25.848 11.017 1.00 1.00 O ATOM 31 CB GLU 7 -10.040 23.215 10.260 1.00 1.00 C ATOM 32 CD GLU 7 -11.095 20.924 10.382 1.00 1.00 C ATOM 33 CG GLU 7 -9.956 21.760 9.833 1.00 1.00 C ATOM 34 OE1 GLU 7 -11.921 21.472 11.143 1.00 1.00 O ATOM 35 OE2 GLU 7 -11.164 19.722 10.051 1.00 1.00 O ATOM 36 N PRO 8 -8.686 26.395 9.211 1.00 1.00 N ATOM 37 CA PRO 8 -9.037 27.775 9.397 1.00 1.00 C ATOM 38 C PRO 8 -10.291 28.046 8.632 1.00 1.00 C ATOM 39 O PRO 8 -10.582 27.313 7.691 1.00 1.00 O ATOM 40 CB PRO 8 -7.832 28.540 8.847 1.00 1.00 C ATOM 41 CD PRO 8 -7.345 26.212 8.590 1.00 1.00 C ATOM 42 CG PRO 8 -6.717 27.548 8.868 1.00 1.00 C ATOM 43 N LYS 9 -11.029 29.101 9.017 1.00 1.00 N ATOM 44 CA LYS 9 -12.183 29.515 8.273 1.00 1.00 C ATOM 45 C LYS 9 -11.950 30.959 7.963 1.00 1.00 C ATOM 46 O LYS 9 -11.062 31.569 8.557 1.00 1.00 O ATOM 48 CB LYS 9 -13.458 29.271 9.082 1.00 1.00 C ATOM 49 CD LYS 9 -15.048 27.629 10.120 1.00 1.00 C ATOM 50 CE LYS 9 -15.316 26.166 10.431 1.00 1.00 C ATOM 51 CG LYS 9 -13.739 27.804 9.369 1.00 1.00 C ATOM 55 NZ LYS 9 -16.608 25.976 11.146 1.00 1.00 N ATOM 56 N PRO 10 -12.674 31.543 7.047 1.00 1.00 N ATOM 57 CA PRO 10 -12.430 32.926 6.760 1.00 1.00 C ATOM 58 C PRO 10 -12.855 33.764 7.911 1.00 1.00 C ATOM 59 O PRO 10 -13.845 33.428 8.564 1.00 1.00 O ATOM 60 CB PRO 10 -13.268 33.200 5.511 1.00 1.00 C ATOM 61 CD PRO 10 -13.780 30.965 6.201 1.00 1.00 C ATOM 62 CG PRO 10 -14.372 32.197 5.575 1.00 1.00 C ATOM 63 N GLY 11 -12.123 34.861 8.171 1.00 1.00 N ATOM 64 CA GLY 11 -12.482 35.750 9.230 1.00 1.00 C ATOM 65 C GLY 11 -11.841 35.268 10.488 1.00 1.00 C ATOM 66 O GLY 11 -11.956 35.897 11.538 1.00 1.00 O ATOM 68 N ASP 12 -11.154 34.120 10.403 1.00 1.00 N ATOM 69 CA ASP 12 -10.493 33.562 11.536 1.00 1.00 C ATOM 70 C ASP 12 -9.175 34.271 11.654 1.00 1.00 C ATOM 71 O ASP 12 -8.704 34.888 10.699 1.00 1.00 O ATOM 73 CB ASP 12 -10.332 32.050 11.370 1.00 1.00 C ATOM 74 CG ASP 12 -11.651 31.309 11.466 1.00 1.00 C ATOM 75 OD1 ASP 12 -12.648 31.924 11.899 1.00 1.00 O ATOM 76 OD2 ASP 12 -11.689 30.114 11.105 1.00 1.00 O ATOM 77 N LEU 13 -8.541 34.211 12.843 1.00 1.00 N ATOM 78 CA LEU 13 -7.296 34.901 13.000 1.00 1.00 C ATOM 79 C LEU 13 -6.192 33.890 12.986 1.00 1.00 C ATOM 80 O LEU 13 -6.368 32.750 13.412 1.00 1.00 O ATOM 82 CB LEU 13 -7.295 35.717 14.294 1.00 1.00 C ATOM 83 CG LEU 13 -8.394 36.773 14.431 1.00 1.00 C ATOM 84 CD1 LEU 13 -8.329 37.442 15.795 1.00 1.00 C ATOM 85 CD2 LEU 13 -8.282 37.812 13.326 1.00 1.00 C ATOM 86 N ILE 14 -5.019 34.303 12.462 1.00 1.00 N ATOM 87 CA ILE 14 -3.858 33.462 12.393 1.00 1.00 C ATOM 88 C ILE 14 -2.857 34.068 13.322 1.00 1.00 C ATOM 89 O ILE 14 -2.747 35.290 13.397 1.00 1.00 O ATOM 91 CB ILE 14 -3.333 33.344 10.950 1.00 1.00 C ATOM 92 CD1 ILE 14 -4.939 31.442 10.401 1.00 1.00 C ATOM 93 CG1 ILE 14 -4.431 32.817 10.024 1.00 1.00 C ATOM 94 CG2 ILE 14 -2.087 32.471 10.907 1.00 1.00 C ATOM 95 N GLU 15 -2.107 33.221 14.061 1.00 1.00 N ATOM 96 CA GLU 15 -1.197 33.730 15.055 1.00 1.00 C ATOM 97 C GLU 15 0.221 33.362 14.716 1.00 1.00 C ATOM 98 O GLU 15 0.491 32.334 14.099 1.00 1.00 O ATOM 100 CB GLU 15 -1.566 33.200 16.442 1.00 1.00 C ATOM 101 CD GLU 15 -3.044 35.088 17.236 1.00 1.00 C ATOM 102 CG GLU 15 -2.952 33.610 16.915 1.00 1.00 C ATOM 103 OE1 GLU 15 -1.990 35.708 17.487 1.00 1.00 O ATOM 104 OE2 GLU 15 -4.171 35.627 17.238 1.00 1.00 O ATOM 105 N ILE 16 1.166 34.228 15.129 1.00 1.00 N ATOM 106 CA ILE 16 2.572 34.025 14.923 1.00 1.00 C ATOM 107 C ILE 16 3.216 34.281 16.257 1.00 1.00 C ATOM 108 O ILE 16 2.609 34.943 17.100 1.00 1.00 O ATOM 110 CB ILE 16 3.117 34.939 13.810 1.00 1.00 C ATOM 111 CD1 ILE 16 5.064 35.173 12.180 1.00 1.00 C ATOM 112 CG1 ILE 16 4.562 34.565 13.472 1.00 1.00 C ATOM 113 CG2 ILE 16 2.989 36.401 14.211 1.00 1.00 C ATOM 114 N PHE 17 4.459 33.782 16.476 1.00 1.00 N ATOM 115 CA PHE 17 5.128 33.938 17.739 1.00 1.00 C ATOM 116 C PHE 17 4.212 33.545 18.851 1.00 1.00 C ATOM 117 O PHE 17 3.769 34.371 19.639 1.00 1.00 O ATOM 119 CB PHE 17 5.610 35.379 17.916 1.00 1.00 C ATOM 120 CG PHE 17 6.599 35.820 16.875 1.00 1.00 C ATOM 121 CZ PHE 17 8.433 36.634 14.953 1.00 1.00 C ATOM 122 CD1 PHE 17 6.187 36.553 15.776 1.00 1.00 C ATOM 123 CE1 PHE 17 7.097 36.959 14.817 1.00 1.00 C ATOM 124 CD2 PHE 17 7.941 35.503 16.996 1.00 1.00 C ATOM 125 CE2 PHE 17 8.850 35.909 16.038 1.00 1.00 C ATOM 126 N ARG 18 3.928 32.231 18.931 1.00 1.00 N ATOM 127 CA ARG 18 2.960 31.600 19.788 1.00 1.00 C ATOM 128 C ARG 18 3.123 31.877 21.260 1.00 1.00 C ATOM 129 O ARG 18 2.090 32.135 21.877 1.00 1.00 O ATOM 131 CB ARG 18 2.981 30.083 19.593 1.00 1.00 C ATOM 132 CD ARG 18 2.176 28.117 18.258 1.00 1.00 C ATOM 134 NE ARG 18 3.423 27.371 18.404 1.00 1.00 N ATOM 135 CG ARG 18 2.406 29.619 18.265 1.00 1.00 C ATOM 136 CZ ARG 18 4.202 27.011 17.389 1.00 1.00 C ATOM 139 NH1 ARG 18 5.320 26.334 17.618 1.00 1.00 H ATOM 142 NH2 ARG 18 3.863 27.330 16.148 1.00 1.00 H ATOM 143 N PRO 19 4.268 31.845 21.901 1.00 1.00 N ATOM 144 CA PRO 19 4.301 32.010 23.332 1.00 1.00 C ATOM 145 C PRO 19 3.687 33.300 23.757 1.00 1.00 C ATOM 146 O PRO 19 2.890 33.312 24.693 1.00 1.00 O ATOM 147 CB PRO 19 5.792 31.969 23.674 1.00 1.00 C ATOM 148 CD PRO 19 5.679 31.479 21.334 1.00 1.00 C ATOM 149 CG PRO 19 6.397 31.123 22.605 1.00 1.00 C ATOM 150 N PHE 20 4.043 34.390 23.064 1.00 1.00 N ATOM 151 CA PHE 20 3.397 35.642 23.276 1.00 1.00 C ATOM 152 C PHE 20 3.031 36.073 21.894 1.00 1.00 C ATOM 153 O PHE 20 3.912 36.417 21.106 1.00 1.00 O ATOM 155 CB PHE 20 4.329 36.609 24.010 1.00 1.00 C ATOM 156 CG PHE 20 4.746 36.132 25.371 1.00 1.00 C ATOM 157 CZ PHE 20 5.514 35.253 27.894 1.00 1.00 C ATOM 158 CD1 PHE 20 5.838 35.295 25.523 1.00 1.00 C ATOM 159 CE1 PHE 20 6.223 34.857 26.776 1.00 1.00 C ATOM 160 CD2 PHE 20 4.047 36.519 26.501 1.00 1.00 C ATOM 161 CE2 PHE 20 4.432 36.081 27.753 1.00 1.00 C ATOM 162 N TYR 21 1.718 36.073 21.571 1.00 1.00 N ATOM 163 CA TYR 21 1.326 36.355 20.221 1.00 1.00 C ATOM 164 C TYR 21 1.820 37.726 19.923 1.00 1.00 C ATOM 165 O TYR 21 1.548 38.663 20.673 1.00 1.00 O ATOM 167 CB TYR 21 -0.191 36.227 20.067 1.00 1.00 C ATOM 168 CG TYR 21 -0.697 34.804 20.136 1.00 1.00 C ATOM 170 OH TYR 21 -2.101 30.895 20.338 1.00 1.00 H ATOM 171 CZ TYR 21 -1.634 32.188 20.270 1.00 1.00 C ATOM 172 CD1 TYR 21 -1.870 34.499 20.814 1.00 1.00 C ATOM 173 CE1 TYR 21 -2.340 33.201 20.884 1.00 1.00 C ATOM 174 CD2 TYR 21 0.001 33.770 19.524 1.00 1.00 C ATOM 175 CE2 TYR 21 -0.454 32.467 19.583 1.00 1.00 C ATOM 176 N ARG 22 2.602 37.883 18.841 1.00 1.00 N ATOM 177 CA ARG 22 3.065 39.206 18.576 1.00 1.00 C ATOM 178 C ARG 22 2.723 39.555 17.166 1.00 1.00 C ATOM 179 O ARG 22 3.085 40.629 16.691 1.00 1.00 O ATOM 181 CB ARG 22 4.571 39.306 18.828 1.00 1.00 C ATOM 182 CD ARG 22 6.477 39.240 20.460 1.00 1.00 C ATOM 184 NE ARG 22 6.946 40.602 20.215 1.00 1.00 N ATOM 185 CG ARG 22 4.972 39.116 20.281 1.00 1.00 C ATOM 186 CZ ARG 22 8.226 40.943 20.114 1.00 1.00 C ATOM 189 NH1 ARG 22 8.559 42.207 19.889 1.00 1.00 H ATOM 192 NH2 ARG 22 9.171 40.021 20.238 1.00 1.00 H ATOM 193 N HIS 23 2.017 38.662 16.447 1.00 1.00 N ATOM 194 CA HIS 23 1.624 39.023 15.118 1.00 1.00 C ATOM 195 C HIS 23 0.365 38.283 14.829 1.00 1.00 C ATOM 196 O HIS 23 0.181 37.155 15.289 1.00 1.00 O ATOM 198 CB HIS 23 2.738 38.692 14.121 1.00 1.00 C ATOM 199 CG HIS 23 2.478 39.195 12.736 1.00 1.00 C ATOM 200 ND1 HIS 23 1.641 38.549 11.854 1.00 1.00 N ATOM 201 CE1 HIS 23 1.609 39.234 10.697 1.00 1.00 C ATOM 202 CD2 HIS 23 2.921 40.335 11.945 1.00 1.00 C ATOM 204 NE2 HIS 23 2.375 40.307 10.745 1.00 1.00 N ATOM 205 N TRP 24 -0.549 38.925 14.073 1.00 1.00 N ATOM 206 CA TRP 24 -1.807 38.312 13.762 1.00 1.00 C ATOM 207 C TRP 24 -2.086 38.589 12.327 1.00 1.00 C ATOM 208 O TRP 24 -1.440 39.425 11.696 1.00 1.00 O ATOM 210 CB TRP 24 -2.907 38.851 14.679 1.00 1.00 C ATOM 213 CG TRP 24 -3.153 40.320 14.521 1.00 1.00 C ATOM 214 CD1 TRP 24 -2.497 41.333 15.157 1.00 1.00 C ATOM 216 NE1 TRP 24 -2.999 42.549 14.757 1.00 1.00 N ATOM 217 CD2 TRP 24 -4.127 40.941 13.672 1.00 1.00 C ATOM 218 CE2 TRP 24 -4.003 42.331 13.844 1.00 1.00 C ATOM 219 CH2 TRP 24 -5.740 42.741 12.300 1.00 1.00 H ATOM 220 CZ2 TRP 24 -4.806 43.242 13.161 1.00 1.00 C ATOM 221 CE3 TRP 24 -5.090 40.455 12.784 1.00 1.00 C ATOM 222 CZ3 TRP 24 -5.885 41.363 12.109 1.00 1.00 C ATOM 223 N ALA 25 -3.078 37.866 11.776 1.00 1.00 N ATOM 224 CA ALA 25 -3.443 38.041 10.405 1.00 1.00 C ATOM 225 C ALA 25 -4.848 37.522 10.253 1.00 1.00 C ATOM 226 O ALA 25 -5.344 36.801 11.116 1.00 1.00 O ATOM 228 CB ALA 25 -2.460 37.317 9.498 1.00 1.00 C ATOM 229 N ILE 26 -5.533 37.892 9.148 1.00 1.00 N ATOM 230 CA ILE 26 -6.904 37.507 8.940 1.00 1.00 C ATOM 231 C ILE 26 -6.951 36.526 7.804 1.00 1.00 C ATOM 232 O ILE 26 -6.541 36.839 6.688 1.00 1.00 O ATOM 234 CB ILE 26 -7.798 38.730 8.663 1.00 1.00 C ATOM 235 CD1 ILE 26 -8.430 41.026 9.573 1.00 1.00 C ATOM 236 CG1 ILE 26 -7.761 39.697 9.848 1.00 1.00 C ATOM 237 CG2 ILE 26 -9.216 38.290 8.335 1.00 1.00 C ATOM 238 N TYR 27 -7.496 35.317 8.058 1.00 1.00 N ATOM 239 CA TYR 27 -7.486 34.227 7.113 1.00 1.00 C ATOM 240 C TYR 27 -8.593 34.400 6.107 1.00 1.00 C ATOM 241 O TYR 27 -9.763 34.502 6.467 1.00 1.00 O ATOM 243 CB TYR 27 -7.623 32.887 7.838 1.00 1.00 C ATOM 244 CG TYR 27 -7.590 31.686 6.920 1.00 1.00 C ATOM 246 OH TYR 27 -7.483 28.388 4.390 1.00 1.00 H ATOM 247 CZ TYR 27 -7.520 29.480 5.227 1.00 1.00 C ATOM 248 CD1 TYR 27 -6.406 31.290 6.311 1.00 1.00 C ATOM 249 CE1 TYR 27 -6.367 30.193 5.470 1.00 1.00 C ATOM 250 CD2 TYR 27 -8.742 30.955 6.663 1.00 1.00 C ATOM 251 CE2 TYR 27 -8.721 29.857 5.826 1.00 1.00 C ATOM 252 N VAL 28 -8.215 34.527 4.811 1.00 1.00 N ATOM 253 CA VAL 28 -9.120 34.647 3.694 1.00 1.00 C ATOM 254 C VAL 28 -9.664 33.327 3.236 1.00 1.00 C ATOM 255 O VAL 28 -10.825 33.223 2.845 1.00 1.00 O ATOM 257 CB VAL 28 -8.450 35.347 2.497 1.00 1.00 C ATOM 258 CG1 VAL 28 -9.363 35.317 1.282 1.00 1.00 C ATOM 259 CG2 VAL 28 -8.081 36.778 2.856 1.00 1.00 C ATOM 260 N GLY 29 -8.810 32.283 3.241 1.00 1.00 N ATOM 261 CA GLY 29 -9.160 30.991 2.724 1.00 1.00 C ATOM 262 C GLY 29 -8.058 30.629 1.770 1.00 1.00 C ATOM 263 O GLY 29 -7.226 31.467 1.437 1.00 1.00 O ATOM 265 N ASP 30 -8.022 29.359 1.319 1.00 1.00 N ATOM 266 CA ASP 30 -7.050 28.833 0.391 1.00 1.00 C ATOM 267 C ASP 30 -5.652 29.117 0.847 1.00 1.00 C ATOM 268 O ASP 30 -4.751 29.307 0.031 1.00 1.00 O ATOM 270 CB ASP 30 -7.273 29.415 -1.006 1.00 1.00 C ATOM 271 CG ASP 30 -8.597 28.991 -1.609 1.00 1.00 C ATOM 272 OD1 ASP 30 -9.087 27.896 -1.258 1.00 1.00 O ATOM 273 OD2 ASP 30 -9.146 29.753 -2.434 1.00 1.00 O ATOM 274 N GLY 31 -5.431 29.138 2.174 1.00 1.00 N ATOM 275 CA GLY 31 -4.099 29.279 2.694 1.00 1.00 C ATOM 276 C GLY 31 -3.689 30.721 2.738 1.00 1.00 C ATOM 277 O GLY 31 -2.653 31.046 3.317 1.00 1.00 O ATOM 279 N TYR 32 -4.492 31.633 2.152 1.00 1.00 N ATOM 280 CA TYR 32 -4.160 33.038 2.101 1.00 1.00 C ATOM 281 C TYR 32 -4.675 33.780 3.295 1.00 1.00 C ATOM 282 O TYR 32 -5.728 33.471 3.848 1.00 1.00 O ATOM 284 CB TYR 32 -4.713 33.673 0.824 1.00 1.00 C ATOM 285 CG TYR 32 -4.036 33.195 -0.440 1.00 1.00 C ATOM 287 OH TYR 32 -2.184 31.870 -3.919 1.00 1.00 H ATOM 288 CZ TYR 32 -2.796 32.310 -2.768 1.00 1.00 C ATOM 289 CD1 TYR 32 -4.520 32.093 -1.134 1.00 1.00 C ATOM 290 CE1 TYR 32 -3.907 31.649 -2.290 1.00 1.00 C ATOM 291 CD2 TYR 32 -2.914 33.848 -0.937 1.00 1.00 C ATOM 292 CE2 TYR 32 -2.289 33.418 -2.093 1.00 1.00 C ATOM 293 N VAL 33 -3.882 34.773 3.751 1.00 1.00 N ATOM 294 CA VAL 33 -4.244 35.582 4.876 1.00 1.00 C ATOM 295 C VAL 33 -3.788 36.984 4.584 1.00 1.00 C ATOM 296 O VAL 33 -2.828 37.184 3.840 1.00 1.00 O ATOM 298 CB VAL 33 -3.632 35.040 6.181 1.00 1.00 C ATOM 299 CG1 VAL 33 -4.164 33.647 6.481 1.00 1.00 C ATOM 300 CG2 VAL 33 -2.113 35.027 6.093 1.00 1.00 C ATOM 301 N VAL 34 -4.474 37.994 5.163 1.00 1.00 N ATOM 302 CA VAL 34 -4.109 39.366 4.949 1.00 1.00 C ATOM 303 C VAL 34 -3.561 39.860 6.251 1.00 1.00 C ATOM 304 O VAL 34 -3.989 39.420 7.317 1.00 1.00 O ATOM 306 CB VAL 34 -5.309 40.199 4.460 1.00 1.00 C ATOM 307 CG1 VAL 34 -5.810 39.678 3.122 1.00 1.00 C ATOM 308 CG2 VAL 34 -6.424 40.183 5.494 1.00 1.00 C ATOM 309 N HIS 35 -2.566 40.767 6.211 1.00 1.00 N ATOM 310 CA HIS 35 -2.024 41.233 7.453 1.00 1.00 C ATOM 311 C HIS 35 -1.213 42.453 7.183 1.00 1.00 C ATOM 312 O HIS 35 -0.784 42.702 6.058 1.00 1.00 O ATOM 314 CB HIS 35 -1.187 40.136 8.117 1.00 1.00 C ATOM 315 CG HIS 35 0.020 39.738 7.328 1.00 1.00 C ATOM 317 ND1 HIS 35 1.158 40.512 7.265 1.00 1.00 N ATOM 318 CE1 HIS 35 2.065 39.897 6.485 1.00 1.00 C ATOM 319 CD2 HIS 35 0.385 38.604 6.490 1.00 1.00 C ATOM 320 NE2 HIS 35 1.608 38.752 6.017 1.00 1.00 N ATOM 321 N LEU 36 -1.017 43.261 8.238 1.00 1.00 N ATOM 322 CA LEU 36 -0.166 44.410 8.186 1.00 1.00 C ATOM 323 C LEU 36 1.106 43.951 8.805 1.00 1.00 C ATOM 324 O LEU 36 1.084 43.257 9.819 1.00 1.00 O ATOM 326 CB LEU 36 -0.814 45.590 8.912 1.00 1.00 C ATOM 327 CG LEU 36 -2.168 46.057 8.375 1.00 1.00 C ATOM 328 CD1 LEU 36 -2.731 47.178 9.237 1.00 1.00 C ATOM 329 CD2 LEU 36 -2.045 46.513 6.929 1.00 1.00 C ATOM 330 N ALA 37 2.264 44.296 8.213 1.00 1.00 N ATOM 331 CA ALA 37 3.438 43.776 8.843 1.00 1.00 C ATOM 332 C ALA 37 4.579 44.741 8.737 1.00 1.00 C ATOM 333 O ALA 37 4.626 45.655 7.914 1.00 1.00 O ATOM 335 CB ALA 37 3.824 42.440 8.225 1.00 1.00 C ATOM 336 N PRO 38 5.476 44.502 9.654 1.00 1.00 N ATOM 337 CA PRO 38 6.641 45.326 9.862 1.00 1.00 C ATOM 338 C PRO 38 7.735 45.177 8.861 1.00 1.00 C ATOM 339 O PRO 38 7.661 44.349 7.954 1.00 1.00 O ATOM 340 CB PRO 38 7.153 44.901 11.240 1.00 1.00 C ATOM 341 CD PRO 38 5.453 43.316 10.666 1.00 1.00 C ATOM 342 CG PRO 38 6.787 43.458 11.345 1.00 1.00 C ATOM 343 N PRO 39 8.700 46.036 9.023 1.00 1.00 N ATOM 344 CA PRO 39 9.878 46.011 8.205 1.00 1.00 C ATOM 345 C PRO 39 10.770 44.921 8.700 1.00 1.00 C ATOM 346 O PRO 39 10.513 44.380 9.773 1.00 1.00 O ATOM 347 CB PRO 39 10.487 47.403 8.390 1.00 1.00 C ATOM 348 CD PRO 39 8.737 47.244 10.015 1.00 1.00 C ATOM 349 CG PRO 39 10.118 47.790 9.783 1.00 1.00 C ATOM 350 N SER 40 11.786 44.564 7.893 1.00 1.00 N ATOM 351 CA SER 40 12.836 43.629 8.188 1.00 1.00 C ATOM 352 C SER 40 12.299 42.253 8.345 1.00 1.00 C ATOM 353 O SER 40 13.053 41.307 8.567 1.00 1.00 O ATOM 355 CB SER 40 13.586 44.048 9.454 1.00 1.00 C ATOM 357 OG SER 40 14.162 45.335 9.304 1.00 1.00 O ATOM 358 N GLU 41 10.981 42.075 8.199 1.00 1.00 N ATOM 359 CA GLU 41 10.477 40.746 8.328 1.00 1.00 C ATOM 360 C GLU 41 9.342 40.641 7.379 1.00 1.00 C ATOM 361 O GLU 41 9.042 39.562 6.871 1.00 1.00 O ATOM 363 CB GLU 41 10.066 40.467 9.775 1.00 1.00 C ATOM 364 CD GLU 41 10.776 40.198 12.184 1.00 1.00 C ATOM 365 CG GLU 41 11.225 40.450 10.758 1.00 1.00 C ATOM 366 OE1 GLU 41 9.551 40.107 12.414 1.00 1.00 O ATOM 367 OE2 GLU 41 11.649 40.090 13.071 1.00 1.00 O ATOM 368 N VAL 42 8.679 41.781 7.091 1.00 1.00 N ATOM 369 CA VAL 42 7.542 41.644 6.234 1.00 1.00 C ATOM 370 C VAL 42 7.495 42.837 5.311 1.00 1.00 C ATOM 371 O VAL 42 8.530 43.406 4.966 1.00 1.00 O ATOM 373 CB VAL 42 6.238 41.512 7.043 1.00 1.00 C ATOM 374 CG1 VAL 42 5.037 41.454 6.112 1.00 1.00 C ATOM 375 CG2 VAL 42 6.286 40.281 7.934 1.00 1.00 C ATOM 376 N ALA 43 6.286 43.164 4.825 1.00 1.00 N ATOM 377 CA ALA 43 5.914 44.139 3.836 1.00 1.00 C ATOM 378 C ALA 43 6.111 45.567 4.235 1.00 1.00 C ATOM 379 O ALA 43 6.388 46.393 3.369 1.00 1.00 O ATOM 381 CB ALA 43 4.456 43.964 3.442 1.00 1.00 C ATOM 382 N GLY 44 5.917 45.933 5.518 1.00 1.00 N ATOM 383 CA GLY 44 6.004 47.327 5.850 1.00 1.00 C ATOM 384 C GLY 44 4.671 47.931 5.521 1.00 1.00 C ATOM 385 O GLY 44 4.540 49.144 5.354 1.00 1.00 O ATOM 387 N ALA 45 3.644 47.065 5.396 1.00 1.00 N ATOM 388 CA ALA 45 2.316 47.507 5.090 1.00 1.00 C ATOM 389 C ALA 45 1.452 46.295 4.978 1.00 1.00 C ATOM 390 O ALA 45 1.877 45.177 5.260 1.00 1.00 O ATOM 392 CB ALA 45 2.313 48.330 3.811 1.00 1.00 C ATOM 393 N GLY 46 0.179 46.513 4.596 1.00 1.00 N ATOM 394 CA GLY 46 -0.742 45.422 4.446 1.00 1.00 C ATOM 395 C GLY 46 -0.393 44.671 3.201 1.00 1.00 C ATOM 396 O GLY 46 -0.093 45.266 2.166 1.00 1.00 O ATOM 398 N ALA 47 -0.472 43.325 3.273 1.00 1.00 N ATOM 399 CA ALA 47 -0.145 42.493 2.153 1.00 1.00 C ATOM 400 C ALA 47 -0.729 41.135 2.383 1.00 1.00 C ATOM 401 O ALA 47 -1.353 40.868 3.410 1.00 1.00 O ATOM 403 CB ALA 47 1.363 42.427 1.965 1.00 1.00 C ATOM 404 N ALA 48 -0.546 40.239 1.390 1.00 1.00 N ATOM 405 CA ALA 48 -1.083 38.912 1.461 1.00 1.00 C ATOM 406 C ALA 48 0.041 37.929 1.584 1.00 1.00 C ATOM 407 O ALA 48 1.122 38.102 1.020 1.00 1.00 O ATOM 409 CB ALA 48 -1.935 38.619 0.236 1.00 1.00 C ATOM 410 N SER 49 -0.206 36.854 2.361 1.00 1.00 N ATOM 411 CA SER 49 0.768 35.819 2.555 1.00 1.00 C ATOM 412 C SER 49 0.036 34.522 2.466 1.00 1.00 C ATOM 413 O SER 49 -1.185 34.477 2.616 1.00 1.00 O ATOM 415 CB SER 49 1.480 35.999 3.897 1.00 1.00 C ATOM 417 OG SER 49 0.579 35.836 4.979 1.00 1.00 O ATOM 418 N VAL 50 0.781 33.428 2.208 1.00 1.00 N ATOM 419 CA VAL 50 0.195 32.123 2.146 1.00 1.00 C ATOM 420 C VAL 50 0.832 31.320 3.233 1.00 1.00 C ATOM 421 O VAL 50 1.990 31.540 3.586 1.00 1.00 O ATOM 423 CB VAL 50 0.388 31.483 0.758 1.00 1.00 C ATOM 424 CG1 VAL 50 -0.181 30.073 0.738 1.00 1.00 C ATOM 425 CG2 VAL 50 -0.262 32.340 -0.317 1.00 1.00 C ATOM 426 N MET 51 0.075 30.369 3.811 1.00 1.00 N ATOM 427 CA MET 51 0.630 29.591 4.876 1.00 1.00 C ATOM 428 C MET 51 1.250 28.376 4.273 1.00 1.00 C ATOM 429 O MET 51 0.658 27.298 4.226 1.00 1.00 O ATOM 431 CB MET 51 -0.450 29.233 5.898 1.00 1.00 C ATOM 432 SD MET 51 -2.360 29.979 7.762 1.00 1.00 S ATOM 433 CE MET 51 -1.455 29.128 9.053 1.00 1.00 C ATOM 434 CG MET 51 -1.018 30.429 6.645 1.00 1.00 C ATOM 435 N SER 52 2.497 28.545 3.798 1.00 1.00 N ATOM 436 CA SER 52 3.215 27.461 3.207 1.00 1.00 C ATOM 437 C SER 52 4.655 27.701 3.489 1.00 1.00 C ATOM 438 O SER 52 5.100 28.843 3.582 1.00 1.00 O ATOM 440 CB SER 52 2.919 27.376 1.709 1.00 1.00 C ATOM 442 OG SER 52 3.630 26.308 1.107 1.00 1.00 O ATOM 443 N ALA 53 5.407 26.604 3.661 1.00 1.00 N ATOM 444 CA ALA 53 6.830 26.658 3.783 1.00 1.00 C ATOM 445 C ALA 53 7.301 27.108 2.440 1.00 1.00 C ATOM 446 O ALA 53 8.307 27.802 2.305 1.00 1.00 O ATOM 448 CB ALA 53 7.377 25.302 4.199 1.00 1.00 C ATOM 449 N LEU 54 6.537 26.687 1.417 1.00 1.00 N ATOM 450 CA LEU 54 6.780 26.899 0.022 1.00 1.00 C ATOM 451 C LEU 54 6.770 28.367 -0.277 1.00 1.00 C ATOM 452 O LEU 54 7.539 28.840 -1.112 1.00 1.00 O ATOM 454 CB LEU 54 5.735 26.165 -0.821 1.00 1.00 C ATOM 455 CG LEU 54 5.808 24.638 -0.813 1.00 1.00 C ATOM 456 CD1 LEU 54 4.612 24.037 -1.536 1.00 1.00 C ATOM 457 CD2 LEU 54 7.105 24.158 -1.447 1.00 1.00 C ATOM 458 N THR 55 5.907 29.133 0.418 1.00 1.00 N ATOM 459 CA THR 55 5.720 30.532 0.142 1.00 1.00 C ATOM 460 C THR 55 7.026 31.260 0.167 1.00 1.00 C ATOM 461 O THR 55 8.055 30.745 0.603 1.00 1.00 O ATOM 463 CB THR 55 4.751 31.180 1.149 1.00 1.00 C ATOM 465 OG1 THR 55 3.472 30.539 1.067 1.00 1.00 O ATOM 466 CG2 THR 55 4.573 32.659 0.840 1.00 1.00 C ATOM 467 N ASP 56 6.992 32.507 -0.345 1.00 1.00 N ATOM 468 CA ASP 56 8.145 33.353 -0.421 1.00 1.00 C ATOM 469 C ASP 56 8.535 33.658 0.988 1.00 1.00 C ATOM 470 O ASP 56 7.682 33.704 1.871 1.00 1.00 O ATOM 472 CB ASP 56 7.833 34.613 -1.232 1.00 1.00 C ATOM 473 CG ASP 56 7.658 34.326 -2.710 1.00 1.00 C ATOM 474 OD1 ASP 56 8.013 33.211 -3.145 1.00 1.00 O ATOM 475 OD2 ASP 56 7.165 35.217 -3.434 1.00 1.00 O ATOM 476 N LYS 57 9.839 33.860 1.249 1.00 1.00 N ATOM 477 CA LYS 57 10.209 34.138 2.601 1.00 1.00 C ATOM 478 C LYS 57 9.632 35.478 2.917 1.00 1.00 C ATOM 479 O LYS 57 9.953 36.465 2.260 1.00 1.00 O ATOM 481 CB LYS 57 11.730 34.093 2.760 1.00 1.00 C ATOM 482 CD LYS 57 13.722 34.154 4.285 1.00 1.00 C ATOM 483 CE LYS 57 14.202 34.341 5.716 1.00 1.00 C ATOM 484 CG LYS 57 12.209 34.274 4.191 1.00 1.00 C ATOM 488 NZ LYS 57 15.684 34.243 5.820 1.00 1.00 N ATOM 489 N ALA 58 8.752 35.542 3.933 1.00 1.00 N ATOM 490 CA ALA 58 8.147 36.779 4.307 1.00 1.00 C ATOM 491 C ALA 58 7.485 36.538 5.656 1.00 1.00 C ATOM 492 O ALA 58 6.665 35.585 5.750 1.00 1.00 O ATOM 494 OXT ALA 58 7.792 37.305 6.609 1.00 1.00 O ATOM 495 CB ALA 58 7.160 37.230 3.241 1.00 1.00 C TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 282 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 53.65 74.6 63 32.6 193 ARMSMC SECONDARY STRUCTURE . . 46.80 73.8 42 38.9 108 ARMSMC SURFACE . . . . . . . . 81.28 60.0 25 20.7 121 ARMSMC BURIED . . . . . . . . 20.65 84.2 38 52.8 72 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 67.29 63.0 27 32.1 84 ARMSSC1 RELIABLE SIDE CHAINS . 64.49 66.7 24 32.0 75 ARMSSC1 SECONDARY STRUCTURE . . 76.54 61.1 18 36.0 50 ARMSSC1 SURFACE . . . . . . . . 57.23 66.7 12 21.8 55 ARMSSC1 BURIED . . . . . . . . 74.36 60.0 15 51.7 29 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 67.94 66.7 24 40.0 60 ARMSSC2 RELIABLE SIDE CHAINS . 62.23 70.0 20 43.5 46 ARMSSC2 SECONDARY STRUCTURE . . 72.07 66.7 15 40.5 37 ARMSSC2 SURFACE . . . . . . . . 54.26 66.7 12 29.3 41 ARMSSC2 BURIED . . . . . . . . 79.28 66.7 12 63.2 19 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 88.50 40.0 5 25.0 20 ARMSSC3 RELIABLE SIDE CHAINS . 88.50 40.0 5 27.8 18 ARMSSC3 SECONDARY STRUCTURE . . 114.20 0.0 3 25.0 12 ARMSSC3 SURFACE . . . . . . . . 95.33 50.0 4 25.0 16 ARMSSC3 BURIED . . . . . . . . 53.03 0.0 1 25.0 4 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 103.45 0.0 3 42.9 7 ARMSSC4 RELIABLE SIDE CHAINS . 103.45 0.0 3 42.9 7 ARMSSC4 SECONDARY STRUCTURE . . 97.95 0.0 2 40.0 5 ARMSSC4 SURFACE . . . . . . . . 103.45 0.0 3 50.0 6 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 1 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 4.16 (Number of atoms: 34) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 4.16 34 34.3 99 CRMSCA CRN = ALL/NP . . . . . 0.1222 CRMSCA SECONDARY STRUCTURE . . 2.83 21 38.9 54 CRMSCA SURFACE . . . . . . . . 5.18 14 22.2 63 CRMSCA BURIED . . . . . . . . 3.25 20 55.6 36 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 4.22 167 34.2 489 CRMSMC SECONDARY STRUCTURE . . 2.94 104 38.7 269 CRMSMC SURFACE . . . . . . . . 5.14 69 22.2 311 CRMSMC BURIED . . . . . . . . 3.43 98 55.1 178 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 6.44 146 35.0 417 CRMSSC RELIABLE SIDE CHAINS . 6.76 128 36.5 351 CRMSSC SECONDARY STRUCTURE . . 5.87 103 40.9 252 CRMSSC SURFACE . . . . . . . . 8.47 72 25.6 281 CRMSSC BURIED . . . . . . . . 3.46 74 54.4 136 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 5.43 282 34.7 813 CRMSALL SECONDARY STRUCTURE . . 4.73 187 40.0 468 CRMSALL SURFACE . . . . . . . . 7.12 128 24.0 533 CRMSALL BURIED . . . . . . . . 3.44 154 55.0 280 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.217 0.428 0.220 34 34.3 99 ERRCA SECONDARY STRUCTURE . . 1.588 0.386 0.203 21 38.9 54 ERRCA SURFACE . . . . . . . . 2.927 0.496 0.248 14 22.2 63 ERRCA BURIED . . . . . . . . 1.719 0.380 0.201 20 55.6 36 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.284 0.428 0.218 167 34.2 489 ERRMC SECONDARY STRUCTURE . . 1.636 0.382 0.198 104 38.7 269 ERRMC SURFACE . . . . . . . . 3.002 0.503 0.252 69 22.2 311 ERRMC BURIED . . . . . . . . 1.778 0.375 0.195 98 55.1 178 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.037 0.549 0.275 146 35.0 417 ERRSC RELIABLE SIDE CHAINS . 4.297 0.560 0.280 128 36.5 351 ERRSC SECONDARY STRUCTURE . . 3.854 0.549 0.275 103 40.9 252 ERRSC SURFACE . . . . . . . . 6.036 0.658 0.329 72 25.6 281 ERRSC BURIED . . . . . . . . 2.091 0.443 0.222 74 54.4 136 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.134 0.485 0.245 282 34.7 813 ERRALL SECONDARY STRUCTURE . . 2.797 0.467 0.238 187 40.0 468 ERRALL SURFACE . . . . . . . . 4.603 0.583 0.291 128 24.0 533 ERRALL BURIED . . . . . . . . 1.912 0.404 0.207 154 55.0 280 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 3 9 22 30 33 34 99 DISTCA CA (P) 3.03 9.09 22.22 30.30 33.33 99 DISTCA CA (RMS) 0.73 1.31 2.03 2.62 3.26 DISTCA ALL (N) 15 66 145 221 260 282 813 DISTALL ALL (P) 1.85 8.12 17.84 27.18 31.98 813 DISTALL ALL (RMS) 0.82 1.39 2.05 2.87 3.83 DISTALL END of the results output