####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 57 ( 440), selected 57 , name T0629TS484_1-D1 # Molecule2: number of CA atoms 57 ( 436), selected 57 , name T0629-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0629TS484_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 27 13 - 39 4.97 14.48 LCS_AVERAGE: 37.21 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 32 - 42 1.80 23.94 LCS_AVERAGE: 12.93 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 27 - 34 0.97 15.16 LONGEST_CONTINUOUS_SEGMENT: 8 33 - 40 0.61 21.72 LCS_AVERAGE: 9.36 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 57 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 0 3 15 0 0 3 3 3 3 4 4 7 15 18 20 22 27 29 30 31 33 33 34 LCS_GDT S 2 S 2 5 5 15 3 5 5 6 6 7 9 12 15 18 22 24 26 28 29 30 32 33 34 36 LCS_GDT Y 3 Y 3 5 5 15 4 5 5 6 6 6 7 10 11 12 13 14 19 22 28 30 32 33 34 36 LCS_GDT P 4 P 4 5 5 18 4 5 5 6 6 7 8 10 11 12 13 14 16 17 18 26 28 30 34 36 LCS_GDT I 5 I 5 5 9 18 4 5 5 6 8 9 10 11 12 13 14 16 17 19 20 22 24 27 31 33 LCS_GDT G 6 G 6 5 9 18 4 5 8 8 8 10 11 11 13 14 14 15 17 18 20 22 24 26 29 31 LCS_GDT A 7 A 7 5 9 18 3 4 8 8 8 10 11 11 13 14 14 16 18 19 20 22 24 26 29 31 LCS_GDT P 8 P 8 5 9 18 4 5 8 8 8 9 11 11 13 14 14 16 17 18 20 22 24 26 29 31 LCS_GDT I 9 I 9 5 9 18 4 5 8 8 8 10 11 11 13 14 15 16 18 19 20 28 29 31 33 36 LCS_GDT P 10 P 10 5 9 18 4 5 8 8 8 10 11 11 13 15 19 22 24 26 27 28 30 33 34 36 LCS_GDT W 11 W 11 5 9 18 4 5 8 8 8 11 14 16 17 18 21 23 25 27 29 30 32 33 34 36 LCS_GDT P 12 P 12 5 9 25 3 5 8 9 10 12 14 16 17 18 22 23 25 28 29 30 32 33 34 36 LCS_GDT S 13 S 13 5 9 27 3 5 8 8 10 12 14 16 17 18 22 24 26 28 29 30 32 33 34 36 LCS_GDT D 14 D 14 5 6 27 3 5 6 8 10 12 14 16 17 18 22 24 26 28 29 30 32 33 34 36 LCS_GDT S 15 S 15 5 6 27 3 5 6 8 10 12 14 16 17 18 22 24 26 28 29 30 32 33 34 36 LCS_GDT V 16 V 16 5 7 27 3 4 5 5 9 12 14 16 17 18 21 24 26 28 29 30 32 33 34 36 LCS_GDT P 17 P 17 5 7 27 3 4 5 7 10 12 14 16 17 18 21 24 26 28 29 30 32 33 34 36 LCS_GDT A 18 A 18 4 7 27 3 4 4 5 6 7 9 11 15 17 21 24 26 28 29 30 32 33 34 36 LCS_GDT G 19 G 19 7 7 27 3 4 7 7 7 8 9 10 13 17 19 20 23 25 29 30 32 33 34 36 LCS_GDT F 20 F 20 7 7 27 3 5 7 7 7 8 10 12 15 18 22 24 26 28 29 30 32 33 34 36 LCS_GDT A 21 A 21 7 7 27 3 5 7 7 10 12 14 16 17 18 22 24 26 28 29 30 32 33 34 36 LCS_GDT L 22 L 22 7 7 27 3 5 7 7 7 10 12 14 17 18 22 24 26 28 29 30 32 33 34 36 LCS_GDT M 23 M 23 7 7 27 3 4 7 7 7 10 12 14 15 18 22 24 26 28 29 30 32 33 34 36 LCS_GDT E 24 E 24 7 7 27 3 5 7 7 7 8 9 12 15 18 22 24 26 28 29 30 32 33 34 36 LCS_GDT G 25 G 25 7 7 27 3 5 7 7 7 10 12 14 15 18 21 24 26 28 29 30 32 33 34 36 LCS_GDT Q 26 Q 26 3 9 27 3 3 3 5 7 10 12 14 15 18 22 24 26 28 29 30 32 33 34 36 LCS_GDT T 27 T 27 8 10 27 3 6 7 9 9 11 12 14 15 18 21 24 26 28 29 30 32 33 34 36 LCS_GDT F 28 F 28 8 10 27 3 7 7 9 9 11 12 14 15 18 22 24 26 28 29 30 32 33 34 36 LCS_GDT D 29 D 29 8 10 27 4 7 7 9 9 11 12 14 15 18 22 24 26 28 29 30 32 33 34 36 LCS_GDT K 30 K 30 8 10 27 3 7 7 9 9 11 12 14 15 18 22 24 26 28 29 30 32 33 34 36 LCS_GDT S 31 S 31 8 10 27 4 7 7 9 9 12 14 16 17 18 22 24 26 28 29 30 32 33 34 36 LCS_GDT A 32 A 32 8 11 27 4 7 7 9 9 11 14 16 17 18 22 24 26 28 29 30 32 33 34 36 LCS_GDT Y 33 Y 33 8 11 27 5 8 9 9 10 12 14 16 17 18 22 24 26 28 29 30 32 33 34 36 LCS_GDT P 34 P 34 8 11 27 5 8 9 9 10 11 12 14 17 18 21 24 26 28 29 30 32 33 34 36 LCS_GDT K 35 K 35 8 11 27 5 8 9 9 10 11 12 14 16 18 22 24 26 28 29 30 32 33 34 36 LCS_GDT L 36 L 36 8 11 27 5 8 9 9 10 12 14 16 17 18 22 24 26 28 29 30 32 33 34 36 LCS_GDT A 37 A 37 8 11 27 5 8 9 9 10 11 13 16 17 18 22 24 26 28 29 30 32 33 34 36 LCS_GDT V 38 V 38 8 11 27 5 8 9 9 10 11 12 14 16 18 22 24 26 28 29 30 32 33 34 36 LCS_GDT A 39 A 39 8 11 27 4 8 9 9 10 11 13 16 17 18 22 23 25 28 29 30 32 33 34 36 LCS_GDT Y 40 Y 40 8 11 20 4 8 9 9 10 10 14 16 17 18 21 22 24 26 28 30 32 33 34 36 LCS_GDT P 41 P 41 4 11 19 4 4 5 7 10 10 11 12 13 15 15 16 17 22 25 28 29 31 34 36 LCS_GDT S 42 S 42 4 11 18 4 4 9 9 10 10 11 11 12 14 15 16 17 17 19 19 20 23 28 32 LCS_GDT G 43 G 43 4 7 18 3 3 5 7 7 7 8 9 11 13 14 15 17 17 19 22 24 26 29 33 LCS_GDT V 44 V 44 4 7 18 3 3 5 7 7 7 8 11 12 15 16 16 19 20 26 28 29 31 33 36 LCS_GDT I 45 I 45 4 7 17 3 3 5 7 7 8 10 11 12 18 20 22 24 26 27 28 29 31 34 36 LCS_GDT P 46 P 46 3 5 17 3 4 5 7 10 12 14 16 17 18 21 22 24 26 27 28 29 31 33 35 LCS_GDT D 47 D 47 3 3 17 3 3 3 4 5 10 11 11 13 18 21 22 24 26 27 28 29 31 33 34 LCS_GDT M 48 M 48 3 3 17 3 4 5 7 10 12 14 16 17 18 21 22 24 26 27 28 29 31 33 35 LCS_GDT R 49 R 49 3 3 17 3 3 3 3 3 4 5 8 13 18 21 22 24 26 27 28 29 31 33 34 LCS_GDT F 209 F 209 3 3 11 3 3 3 3 4 4 6 9 11 12 16 16 19 20 21 22 23 25 28 34 LCS_GDT N 210 N 210 3 3 11 3 3 3 3 4 5 8 11 12 15 16 16 19 20 21 22 23 23 25 27 LCS_GDT Y 211 Y 211 3 3 11 3 3 3 4 5 5 6 9 9 12 14 15 19 20 21 22 23 23 25 27 LCS_GDT I 212 I 212 3 3 11 3 3 3 4 5 5 7 9 13 13 14 15 18 19 21 22 23 25 31 34 LCS_GDT V 213 V 213 3 3 11 3 3 5 6 6 6 10 11 13 14 14 15 17 18 18 20 23 26 29 31 LCS_GDT R 214 R 214 3 3 11 3 3 3 4 5 5 10 11 13 14 14 15 17 18 18 20 23 25 29 31 LCS_GDT L 215 L 215 3 3 11 3 3 3 3 5 10 11 11 13 14 14 15 17 18 18 21 23 26 29 31 LCS_GDT A 216 A 216 3 3 11 3 3 3 3 3 3 4 4 6 8 8 15 16 17 20 21 23 26 29 31 LCS_AVERAGE LCS_A: 19.83 ( 9.36 12.93 37.21 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 5 8 9 9 10 12 14 16 17 18 22 24 26 28 29 30 32 33 34 36 GDT PERCENT_AT 8.77 14.04 15.79 15.79 17.54 21.05 24.56 28.07 29.82 31.58 38.60 42.11 45.61 49.12 50.88 52.63 56.14 57.89 59.65 63.16 GDT RMS_LOCAL 0.24 0.61 0.93 0.93 1.27 2.17 2.41 2.77 2.88 3.04 4.37 4.54 4.72 4.93 5.07 5.20 5.65 5.76 6.17 6.68 GDT RMS_ALL_AT 20.71 21.72 23.35 23.35 23.90 12.80 12.61 12.43 12.46 12.45 13.13 14.06 14.30 13.69 13.39 13.54 12.85 13.02 12.37 11.99 # Checking swapping # possible swapping detected: Y 3 Y 3 # possible swapping detected: D 14 D 14 # possible swapping detected: F 20 F 20 # possible swapping detected: D 29 D 29 # possible swapping detected: D 47 D 47 # possible swapping detected: F 209 F 209 # possible swapping detected: Y 211 Y 211 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA S 1 S 1 26.546 0 0.031 0.703 26.853 0.000 0.000 LGA S 2 S 2 22.618 0 0.682 0.820 24.533 0.000 0.000 LGA Y 3 Y 3 19.157 0 0.261 1.355 20.149 0.000 0.000 LGA P 4 P 4 19.304 0 0.042 0.198 20.475 0.000 0.000 LGA I 5 I 5 18.055 0 0.040 0.643 19.963 0.000 0.000 LGA G 6 G 6 19.085 0 0.160 0.160 19.085 0.000 0.000 LGA A 7 A 7 15.230 0 0.095 0.173 16.304 0.000 0.000 LGA P 8 P 8 14.696 0 0.147 0.173 16.226 0.000 0.000 LGA I 9 I 9 11.241 0 0.119 1.111 12.402 0.476 0.238 LGA P 10 P 10 7.032 0 0.120 0.145 9.775 17.619 11.565 LGA W 11 W 11 3.374 0 0.080 1.132 11.629 58.214 22.891 LGA P 12 P 12 0.707 0 0.627 0.650 3.801 74.167 76.122 LGA S 13 S 13 1.691 0 0.078 0.462 5.073 77.738 62.381 LGA D 14 D 14 1.985 0 0.274 0.910 4.550 60.714 61.786 LGA S 15 S 15 1.574 0 0.312 0.563 3.572 77.143 70.794 LGA V 16 V 16 2.953 0 0.595 0.624 7.310 69.048 48.367 LGA P 17 P 17 2.883 0 0.595 0.554 3.745 56.310 55.646 LGA A 18 A 18 7.737 0 0.089 0.104 9.904 8.810 7.333 LGA G 19 G 19 11.651 0 0.241 0.241 11.651 0.000 0.000 LGA F 20 F 20 6.821 0 0.138 1.216 10.178 13.214 6.883 LGA A 21 A 21 2.422 0 0.099 0.130 3.919 70.000 64.667 LGA L 22 L 22 4.478 0 0.053 0.185 8.778 39.405 26.250 LGA M 23 M 23 9.858 0 0.094 1.035 13.630 1.905 0.952 LGA E 24 E 24 13.128 0 0.109 0.778 16.179 0.000 0.370 LGA G 25 G 25 17.717 0 0.593 0.593 17.717 0.000 0.000 LGA Q 26 Q 26 17.116 0 0.154 1.155 19.547 0.000 0.000 LGA T 27 T 27 17.651 0 0.641 1.163 19.686 0.000 0.000 LGA F 28 F 28 13.039 0 0.068 0.970 14.525 0.000 0.000 LGA D 29 D 29 10.330 0 0.121 0.824 11.241 5.476 3.571 LGA K 30 K 30 8.414 0 0.091 1.082 16.177 11.190 4.974 LGA S 31 S 31 2.844 0 0.060 0.605 5.199 59.405 56.270 LGA A 32 A 32 4.018 0 0.063 0.066 6.530 45.357 38.952 LGA Y 33 Y 33 1.147 0 0.560 1.354 3.815 69.286 68.730 LGA P 34 P 34 6.322 0 0.034 0.333 8.232 17.976 15.374 LGA K 35 K 35 7.171 0 0.058 1.315 12.103 15.476 7.778 LGA L 36 L 36 2.593 0 0.087 1.226 6.015 61.548 50.952 LGA A 37 A 37 5.043 0 0.116 0.136 7.355 25.833 24.095 LGA V 38 V 38 8.607 0 0.075 0.103 12.145 7.500 4.286 LGA A 39 A 39 4.448 0 0.020 0.032 5.619 47.024 43.905 LGA Y 40 Y 40 3.582 0 0.161 1.221 6.335 36.667 43.333 LGA P 41 P 41 10.285 0 0.281 0.468 13.196 1.190 1.088 LGA S 42 S 42 14.317 0 0.104 0.114 15.722 0.000 0.000 LGA G 43 G 43 12.645 0 0.174 0.174 13.388 0.000 0.000 LGA V 44 V 44 9.394 0 0.310 0.479 11.143 3.333 2.313 LGA I 45 I 45 6.060 0 0.665 1.743 11.081 20.833 16.012 LGA P 46 P 46 2.172 0 0.659 0.613 5.669 46.667 60.476 LGA D 47 D 47 6.717 0 0.598 0.961 13.121 21.905 11.310 LGA M 48 M 48 2.960 0 0.057 1.208 4.746 45.238 47.679 LGA R 49 R 49 6.853 0 0.160 1.258 11.331 14.167 5.411 LGA F 209 F 209 14.464 0 0.596 1.342 15.232 0.000 0.000 LGA N 210 N 210 17.857 0 0.612 1.061 23.889 0.000 0.000 LGA Y 211 Y 211 14.996 0 0.596 1.498 17.173 0.000 0.000 LGA I 212 I 212 13.690 0 0.582 1.190 14.354 0.000 0.000 LGA V 213 V 213 17.122 0 0.635 0.901 21.210 0.000 0.000 LGA R 214 R 214 20.129 0 0.627 1.301 22.118 0.000 0.000 LGA L 215 L 215 22.540 0 0.034 0.108 24.899 0.000 0.000 LGA A 216 A 216 24.444 1 0.052 0.053 26.061 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 57 228 228 100.00 436 435 99.77 57 SUMMARY(RMSD_GDC): 10.493 10.467 10.927 20.716 17.943 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 57 57 4.0 16 2.77 27.632 24.015 0.558 LGA_LOCAL RMSD: 2.766 Number of atoms: 16 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 12.434 Number of assigned atoms: 57 Std_ASGN_ATOMS RMSD: 10.493 Standard rmsd on all 57 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.837159 * X + 0.513382 * Y + 0.188689 * Z + 63.540592 Y_new = 0.504713 * X + 0.592130 * Y + 0.628209 * Z + -29.748743 Z_new = 0.210783 * X + 0.621145 * Y + -0.754817 * Z + -25.362631 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.599052 -0.212376 2.453039 [DEG: 148.9147 -12.1683 140.5488 ] ZXZ: 2.849805 2.426172 0.327152 [DEG: 163.2818 139.0094 18.7444 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0629TS484_1-D1 REMARK 2: T0629-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0629TS484_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 57 57 4.0 16 2.77 24.015 10.49 REMARK ---------------------------------------------------------- MOLECULE T0629TS484_1-D1 USER MOD reduce.3.15.091106 removed 1457 hydrogens (0 hets) REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFR REMARK TARGET T0629 REMARK MODEL 1 REMARK PARENT N/A ATOM 1 CAY SER 1 41.968 7.871 -5.202 1.00 0.00 C ATOM 5 CY SER 1 41.070 7.219 -4.223 1.00 0.00 C ATOM 6 OY SER 1 41.422 6.182 -3.669 1.00 0.00 O ATOM 7 N SER 1 39.901 7.836 -4.013 1.00 0.00 N ATOM 9 CA SER 1 38.845 7.385 -3.113 1.00 0.00 C ATOM 11 CB SER 1 38.235 8.538 -2.270 1.00 0.00 C ATOM 14 OG SER 1 39.241 9.163 -1.475 1.00 0.00 O ATOM 16 C SER 1 37.699 6.784 -3.901 1.00 0.00 C ATOM 17 O SER 1 37.490 7.129 -5.062 1.00 0.00 O ATOM 18 N SER 2 36.909 5.890 -3.280 1.00 0.00 N ATOM 20 CA SER 2 35.757 5.260 -3.907 1.00 0.00 C ATOM 22 CB SER 2 36.134 4.103 -4.881 1.00 0.00 C ATOM 25 OG SER 2 35.024 3.672 -5.671 1.00 0.00 O ATOM 27 C SER 2 34.866 4.741 -2.798 1.00 0.00 C ATOM 28 O SER 2 35.221 4.833 -1.623 1.00 0.00 O ATOM 29 N TYR 3 33.678 4.213 -3.137 1.00 0.00 N ATOM 31 CA TYR 3 32.658 3.800 -2.191 1.00 0.00 C ATOM 33 CB TYR 3 31.441 4.765 -2.238 1.00 0.00 C ATOM 36 CG TYR 3 31.801 6.054 -1.557 1.00 0.00 C ATOM 37 CD1 TYR 3 32.196 7.180 -2.299 1.00 0.00 C ATOM 39 CE1 TYR 3 32.569 8.365 -1.648 1.00 0.00 C ATOM 41 CZ TYR 3 32.545 8.433 -0.252 1.00 0.00 C ATOM 42 OH TYR 3 32.928 9.624 0.393 1.00 0.00 H ATOM 44 CD2 TYR 3 31.775 6.137 -0.154 1.00 0.00 C ATOM 46 CE2 TYR 3 32.145 7.322 0.498 1.00 0.00 C ATOM 48 C TYR 3 32.204 2.387 -2.546 1.00 0.00 C ATOM 49 O TYR 3 32.421 1.950 -3.677 1.00 0.00 O ATOM 50 N PRO 4 31.611 1.598 -1.657 1.00 0.00 N ATOM 51 CD PRO 4 31.472 1.890 -0.227 1.00 0.00 C ATOM 54 CA PRO 4 31.118 0.270 -2.000 1.00 0.00 C ATOM 56 CB PRO 4 30.922 -0.404 -0.631 1.00 0.00 C ATOM 59 CG PRO 4 30.596 0.758 0.312 1.00 0.00 C ATOM 62 C PRO 4 29.818 0.312 -2.789 1.00 0.00 C ATOM 63 O PRO 4 28.979 1.184 -2.574 1.00 0.00 O ATOM 64 N ILE 5 29.642 -0.632 -3.732 1.00 0.00 N ATOM 66 CA ILE 5 28.380 -0.885 -4.408 1.00 0.00 C ATOM 68 CB ILE 5 28.571 -1.861 -5.579 1.00 0.00 C ATOM 70 CG2 ILE 5 27.298 -1.952 -6.444 1.00 0.00 C ATOM 74 CG1 ILE 5 29.786 -1.497 -6.477 1.00 0.00 C ATOM 77 CD1 ILE 5 29.710 -0.114 -7.142 1.00 0.00 C ATOM 81 C ILE 5 27.331 -1.416 -3.424 1.00 0.00 C ATOM 82 O ILE 5 27.625 -2.240 -2.565 1.00 0.00 O ATOM 83 N GLY 6 26.064 -0.958 -3.522 1.00 0.00 N ATOM 85 CA GLY 6 24.968 -1.391 -2.645 1.00 0.00 C ATOM 88 C GLY 6 24.315 -2.692 -3.041 1.00 0.00 C ATOM 89 O GLY 6 23.361 -3.129 -2.410 1.00 0.00 O ATOM 90 N ALA 7 24.800 -3.324 -4.118 1.00 0.00 N ATOM 92 CA ALA 7 24.321 -4.594 -4.611 1.00 0.00 C ATOM 94 CB ALA 7 24.074 -4.524 -6.132 1.00 0.00 C ATOM 98 C ALA 7 25.386 -5.647 -4.329 1.00 0.00 C ATOM 99 O ALA 7 26.476 -5.547 -4.901 1.00 0.00 O ATOM 100 N PRO 8 25.168 -6.644 -3.478 1.00 0.00 N ATOM 101 CD PRO 8 24.048 -6.680 -2.530 1.00 0.00 C ATOM 104 CA PRO 8 26.249 -7.540 -3.097 1.00 0.00 C ATOM 106 CB PRO 8 25.898 -7.915 -1.643 1.00 0.00 C ATOM 109 CG PRO 8 24.370 -7.820 -1.566 1.00 0.00 C ATOM 112 C PRO 8 26.242 -8.744 -4.017 1.00 0.00 C ATOM 113 O PRO 8 25.391 -9.620 -3.879 1.00 0.00 O ATOM 114 N ILE 9 27.213 -8.828 -4.943 1.00 0.00 N ATOM 116 CA ILE 9 27.279 -9.882 -5.942 1.00 0.00 C ATOM 118 CB ILE 9 26.626 -9.505 -7.281 1.00 0.00 C ATOM 120 CG2 ILE 9 25.094 -9.484 -7.102 1.00 0.00 C ATOM 124 CG1 ILE 9 27.143 -8.158 -7.846 1.00 0.00 C ATOM 127 CD1 ILE 9 26.694 -7.898 -9.289 1.00 0.00 C ATOM 131 C ILE 9 28.739 -10.243 -6.194 1.00 0.00 C ATOM 132 O ILE 9 29.622 -9.386 -6.061 1.00 0.00 O ATOM 133 N PRO 10 29.081 -11.478 -6.556 1.00 0.00 N ATOM 134 CD PRO 10 28.233 -12.671 -6.446 1.00 0.00 C ATOM 137 CA PRO 10 30.287 -11.746 -7.308 1.00 0.00 C ATOM 139 CB PRO 10 30.462 -13.263 -7.146 1.00 0.00 C ATOM 142 CG PRO 10 29.027 -13.799 -7.114 1.00 0.00 C ATOM 145 C PRO 10 30.083 -11.347 -8.763 1.00 0.00 C ATOM 146 O PRO 10 29.005 -11.531 -9.327 1.00 0.00 O ATOM 147 N TRP 11 31.120 -10.796 -9.397 1.00 0.00 N ATOM 149 CA TRP 11 31.132 -10.526 -10.814 1.00 0.00 C ATOM 151 CB TRP 11 31.756 -9.138 -11.120 1.00 0.00 C ATOM 154 CG TRP 11 31.023 -7.959 -10.484 1.00 0.00 C ATOM 155 CD1 TRP 11 30.919 -7.621 -9.160 1.00 0.00 C ATOM 157 NE1 TRP 11 30.178 -6.466 -9.013 1.00 0.00 N ATOM 159 CE2 TRP 11 29.762 -6.056 -10.259 1.00 0.00 C ATOM 160 CD2 TRP 11 30.268 -6.971 -11.209 1.00 0.00 C ATOM 161 CE3 TRP 11 29.995 -6.819 -12.566 1.00 0.00 C ATOM 163 CZ3 TRP 11 29.191 -5.740 -12.963 1.00 0.00 C ATOM 165 CZ2 TRP 11 28.980 -4.979 -10.654 1.00 0.00 C ATOM 167 CH2 TRP 11 28.690 -4.830 -12.020 1.00 0.00 H ATOM 169 C TRP 11 31.996 -11.640 -11.399 1.00 0.00 C ATOM 170 O TRP 11 33.175 -11.713 -11.036 1.00 0.00 O ATOM 171 N PRO 12 31.483 -12.569 -12.216 1.00 0.00 N ATOM 172 CD PRO 12 30.041 -12.795 -12.378 1.00 0.00 C ATOM 175 CA PRO 12 32.251 -13.681 -12.769 1.00 0.00 C ATOM 177 CB PRO 12 31.269 -14.343 -13.742 1.00 0.00 C ATOM 180 CG PRO 12 29.913 -14.164 -13.054 1.00 0.00 C ATOM 183 C PRO 12 33.592 -13.373 -13.405 1.00 0.00 C ATOM 184 O PRO 12 33.861 -12.249 -13.815 1.00 0.00 O ATOM 185 N SER 13 34.470 -14.381 -13.483 1.00 0.00 N ATOM 187 CA SER 13 35.821 -14.218 -13.972 1.00 0.00 C ATOM 189 CB SER 13 36.864 -14.024 -12.826 1.00 0.00 C ATOM 192 OG SER 13 37.101 -15.173 -12.001 1.00 0.00 O ATOM 194 C SER 13 36.173 -15.412 -14.807 1.00 0.00 C ATOM 195 O SER 13 35.404 -16.369 -14.888 1.00 0.00 O ATOM 196 N ASP 14 37.345 -15.373 -15.470 1.00 0.00 N ATOM 198 CA ASP 14 37.895 -16.517 -16.168 1.00 0.00 C ATOM 200 CB ASP 14 38.194 -17.706 -15.208 1.00 0.00 C ATOM 203 CG ASP 14 39.258 -17.310 -14.201 1.00 0.00 C ATOM 204 OD1 ASP 14 39.008 -16.481 -13.287 1.00 0.00 O ATOM 205 OD2 ASP 14 40.402 -17.816 -14.350 1.00 0.00 O ATOM 206 C ASP 14 37.117 -16.851 -17.443 1.00 0.00 C ATOM 207 O ASP 14 36.791 -17.996 -17.752 1.00 0.00 O ATOM 208 N SER 15 36.842 -15.789 -18.223 1.00 0.00 N ATOM 210 CA SER 15 36.366 -15.817 -19.593 1.00 0.00 C ATOM 212 CB SER 15 34.831 -16.009 -19.713 1.00 0.00 C ATOM 215 OG SER 15 34.474 -16.647 -20.941 1.00 0.00 O ATOM 217 C SER 15 36.843 -14.487 -20.147 1.00 0.00 C ATOM 218 O SER 15 37.195 -13.615 -19.356 1.00 0.00 O ATOM 219 N VAL 16 36.967 -14.311 -21.478 1.00 0.00 N ATOM 221 CA VAL 16 37.960 -13.405 -22.074 1.00 0.00 C ATOM 223 CB VAL 16 38.077 -13.652 -23.585 1.00 0.00 C ATOM 225 CG1 VAL 16 38.974 -12.604 -24.276 1.00 0.00 C ATOM 229 CG2 VAL 16 38.645 -15.068 -23.812 1.00 0.00 C ATOM 233 C VAL 16 37.866 -11.913 -21.702 1.00 0.00 C ATOM 234 O VAL 16 38.889 -11.396 -21.255 1.00 0.00 O ATOM 235 N PRO 17 36.745 -11.186 -21.758 1.00 0.00 N ATOM 236 CD PRO 17 35.704 -11.420 -22.768 1.00 0.00 C ATOM 239 CA PRO 17 36.707 -9.802 -21.288 1.00 0.00 C ATOM 241 CB PRO 17 36.101 -9.067 -22.490 1.00 0.00 C ATOM 244 CG PRO 17 35.054 -10.054 -23.016 1.00 0.00 C ATOM 247 C PRO 17 35.758 -9.762 -20.105 1.00 0.00 C ATOM 248 O PRO 17 35.347 -8.688 -19.677 1.00 0.00 O ATOM 249 N ALA 18 35.367 -10.930 -19.569 1.00 0.00 N ATOM 251 CA ALA 18 34.233 -11.037 -18.683 1.00 0.00 C ATOM 253 CB ALA 18 33.658 -12.466 -18.736 1.00 0.00 C ATOM 257 C ALA 18 34.551 -10.701 -17.233 1.00 0.00 C ATOM 258 O ALA 18 35.411 -11.309 -16.593 1.00 0.00 O ATOM 259 N GLY 19 33.814 -9.721 -16.685 1.00 0.00 N ATOM 261 CA GLY 19 33.790 -9.402 -15.269 1.00 0.00 C ATOM 264 C GLY 19 33.909 -7.929 -15.055 1.00 0.00 C ATOM 265 O GLY 19 33.080 -7.352 -14.363 1.00 0.00 O ATOM 266 N PHE 20 34.935 -7.341 -15.696 1.00 0.00 N ATOM 268 CA PHE 20 35.415 -5.963 -15.674 1.00 0.00 C ATOM 270 CB PHE 20 35.578 -5.315 -14.260 1.00 0.00 C ATOM 273 CG PHE 20 34.371 -4.518 -13.842 1.00 0.00 C ATOM 274 CD1 PHE 20 33.544 -4.952 -12.792 1.00 0.00 C ATOM 276 CE1 PHE 20 32.387 -4.241 -12.451 1.00 0.00 C ATOM 278 CZ PHE 20 32.071 -3.057 -13.127 1.00 0.00 C ATOM 280 CD2 PHE 20 34.058 -3.314 -14.493 1.00 0.00 C ATOM 282 CE2 PHE 20 32.921 -2.578 -14.130 1.00 0.00 C ATOM 284 C PHE 20 36.795 -6.044 -16.316 1.00 0.00 C ATOM 285 O PHE 20 37.630 -6.860 -15.917 1.00 0.00 O ATOM 286 N ALA 21 37.082 -5.242 -17.361 1.00 0.00 N ATOM 288 CA ALA 21 38.260 -5.526 -18.160 1.00 0.00 C ATOM 290 CB ALA 21 37.916 -6.626 -19.191 1.00 0.00 C ATOM 294 C ALA 21 38.862 -4.347 -18.908 1.00 0.00 C ATOM 295 O ALA 21 38.316 -3.249 -18.988 1.00 0.00 O ATOM 296 N LEU 22 40.057 -4.588 -19.479 1.00 0.00 N ATOM 298 CA LEU 22 40.696 -3.740 -20.461 1.00 0.00 C ATOM 300 CB LEU 22 42.162 -3.398 -20.082 1.00 0.00 C ATOM 303 CG LEU 22 42.320 -2.524 -18.822 1.00 0.00 C ATOM 305 CD1 LEU 22 43.798 -2.448 -18.408 1.00 0.00 C ATOM 309 CD2 LEU 22 41.757 -1.109 -19.028 1.00 0.00 C ATOM 313 C LEU 22 40.718 -4.507 -21.772 1.00 0.00 C ATOM 314 O LEU 22 41.085 -5.679 -21.813 1.00 0.00 O ATOM 315 N MET 23 40.319 -3.869 -22.887 1.00 0.00 N ATOM 317 CA MET 23 40.332 -4.500 -24.194 1.00 0.00 C ATOM 319 CB MET 23 38.963 -4.351 -24.911 1.00 0.00 C ATOM 322 CG MET 23 38.939 -4.770 -26.397 1.00 0.00 C ATOM 325 SD MET 23 37.281 -4.948 -27.135 1.00 0.00 S ATOM 326 CE MET 23 36.569 -3.359 -26.624 1.00 0.00 C ATOM 330 C MET 23 41.432 -3.889 -25.032 1.00 0.00 C ATOM 331 O MET 23 41.458 -2.685 -25.289 1.00 0.00 O ATOM 332 N GLU 24 42.373 -4.739 -25.471 1.00 0.00 N ATOM 334 CA GLU 24 43.509 -4.386 -26.294 1.00 0.00 C ATOM 336 CB GLU 24 44.767 -5.069 -25.690 1.00 0.00 C ATOM 339 CG GLU 24 45.014 -4.665 -24.208 1.00 0.00 C ATOM 342 CD GLU 24 46.209 -5.370 -23.570 1.00 0.00 C ATOM 343 OE1 GLU 24 47.350 -5.153 -24.050 1.00 0.00 O ATOM 344 OE2 GLU 24 45.993 -6.104 -22.567 1.00 0.00 O ATOM 345 C GLU 24 43.266 -4.852 -27.725 1.00 0.00 C ATOM 346 O GLU 24 44.046 -4.585 -28.640 1.00 0.00 O ATOM 347 N GLY 25 42.133 -5.556 -27.949 1.00 0.00 N ATOM 349 CA GLY 25 41.611 -5.944 -29.254 1.00 0.00 C ATOM 352 C GLY 25 41.074 -4.809 -30.090 1.00 0.00 C ATOM 353 O GLY 25 40.524 -3.827 -29.603 1.00 0.00 O ATOM 354 N GLN 26 41.170 -4.948 -31.421 1.00 0.00 N ATOM 356 CA GLN 26 40.853 -3.862 -32.325 1.00 0.00 C ATOM 358 CB GLN 26 41.672 -3.958 -33.627 1.00 0.00 C ATOM 361 CG GLN 26 43.194 -4.061 -33.427 1.00 0.00 C ATOM 364 CD GLN 26 43.877 -3.646 -34.724 1.00 0.00 C ATOM 365 OE1 GLN 26 43.672 -4.277 -35.771 1.00 0.00 O ATOM 366 NE2 GLN 26 44.614 -2.519 -34.705 1.00 0.00 N ATOM 369 C GLN 26 39.390 -3.842 -32.742 1.00 0.00 C ATOM 370 O GLN 26 38.928 -4.744 -33.445 1.00 0.00 O ATOM 371 N THR 27 38.629 -2.793 -32.369 1.00 0.00 N ATOM 373 CA THR 27 37.210 -2.709 -32.732 1.00 0.00 C ATOM 375 CB THR 27 36.330 -3.599 -31.836 1.00 0.00 C ATOM 377 OG1 THR 27 34.990 -3.702 -32.307 1.00 0.00 O ATOM 379 CG2 THR 27 36.303 -3.110 -30.382 1.00 0.00 C ATOM 383 C THR 27 36.674 -1.278 -32.747 1.00 0.00 C ATOM 384 O THR 27 35.463 -1.054 -32.785 1.00 0.00 O ATOM 385 N PHE 28 37.549 -0.256 -32.757 1.00 0.00 N ATOM 387 CA PHE 28 37.141 1.138 -32.765 1.00 0.00 C ATOM 389 CB PHE 28 36.785 1.634 -31.327 1.00 0.00 C ATOM 392 CG PHE 28 36.110 2.988 -31.268 1.00 0.00 C ATOM 393 CD1 PHE 28 35.079 3.345 -32.158 1.00 0.00 C ATOM 395 CE1 PHE 28 34.461 4.600 -32.073 1.00 0.00 C ATOM 397 CZ PHE 28 34.862 5.510 -31.087 1.00 0.00 C ATOM 399 CD2 PHE 28 36.495 3.913 -30.284 1.00 0.00 C ATOM 401 CE2 PHE 28 35.876 5.165 -30.187 1.00 0.00 C ATOM 403 C PHE 28 38.285 1.931 -33.386 1.00 0.00 C ATOM 404 O PHE 28 39.301 1.351 -33.762 1.00 0.00 O ATOM 405 N ASP 29 38.121 3.259 -33.567 1.00 0.00 N ATOM 407 CA ASP 29 39.143 4.152 -34.078 1.00 0.00 C ATOM 409 CB ASP 29 38.531 5.562 -34.320 1.00 0.00 C ATOM 412 CG ASP 29 39.598 6.579 -34.673 1.00 0.00 C ATOM 413 OD1 ASP 29 39.696 7.595 -33.947 1.00 0.00 O ATOM 414 OD2 ASP 29 40.425 6.273 -35.567 1.00 0.00 O ATOM 415 C ASP 29 40.415 4.181 -33.209 1.00 0.00 C ATOM 416 O ASP 29 40.378 4.106 -31.981 1.00 0.00 O ATOM 417 N LYS 30 41.583 4.320 -33.868 1.00 0.00 N ATOM 419 CA LYS 30 42.874 4.299 -33.216 1.00 0.00 C ATOM 421 CB LYS 30 43.987 3.797 -34.183 1.00 0.00 C ATOM 424 CG LYS 30 45.224 3.251 -33.441 1.00 0.00 C ATOM 427 CD LYS 30 46.352 2.732 -34.352 1.00 0.00 C ATOM 430 CE LYS 30 47.519 2.087 -33.577 1.00 0.00 C ATOM 433 NZ LYS 30 47.249 0.673 -33.261 1.00 0.00 N ATOM 437 C LYS 30 43.241 5.660 -32.628 1.00 0.00 C ATOM 438 O LYS 30 44.116 5.754 -31.770 1.00 0.00 O ATOM 439 N SER 31 42.565 6.754 -33.044 1.00 0.00 N ATOM 441 CA SER 31 42.750 8.063 -32.419 1.00 0.00 C ATOM 443 CB SER 31 42.467 9.209 -33.430 1.00 0.00 C ATOM 446 OG SER 31 42.899 10.481 -32.941 1.00 0.00 O ATOM 448 C SER 31 41.846 8.219 -31.199 1.00 0.00 C ATOM 449 O SER 31 42.272 8.557 -30.095 1.00 0.00 O ATOM 450 N ALA 32 40.545 7.927 -31.367 1.00 0.00 N ATOM 452 CA ALA 32 39.539 8.033 -30.336 1.00 0.00 C ATOM 454 CB ALA 32 38.150 7.885 -30.988 1.00 0.00 C ATOM 458 C ALA 32 39.643 7.053 -29.169 1.00 0.00 C ATOM 459 O ALA 32 39.415 7.428 -28.017 1.00 0.00 O ATOM 460 N TYR 33 39.964 5.762 -29.421 1.00 0.00 N ATOM 462 CA TYR 33 40.013 4.749 -28.372 1.00 0.00 C ATOM 464 CB TYR 33 40.150 3.317 -28.978 1.00 0.00 C ATOM 467 CG TYR 33 39.964 2.215 -27.966 1.00 0.00 C ATOM 468 CD1 TYR 33 38.781 2.119 -27.213 1.00 0.00 C ATOM 470 CE1 TYR 33 38.622 1.098 -26.265 1.00 0.00 C ATOM 472 CZ TYR 33 39.643 0.167 -26.062 1.00 0.00 C ATOM 473 OH TYR 33 39.488 -0.844 -25.097 1.00 0.00 H ATOM 475 CD2 TYR 33 40.976 1.261 -27.767 1.00 0.00 C ATOM 477 CE2 TYR 33 40.818 0.241 -26.818 1.00 0.00 C ATOM 479 C TYR 33 41.034 5.026 -27.256 1.00 0.00 C ATOM 480 O TYR 33 40.619 4.933 -26.098 1.00 0.00 O ATOM 481 N PRO 34 42.296 5.436 -27.462 1.00 0.00 N ATOM 482 CD PRO 34 43.023 5.313 -28.727 1.00 0.00 C ATOM 485 CA PRO 34 43.197 5.802 -26.370 1.00 0.00 C ATOM 487 CB PRO 34 44.528 6.126 -27.066 1.00 0.00 C ATOM 490 CG PRO 34 44.492 5.246 -28.316 1.00 0.00 C ATOM 493 C PRO 34 42.703 6.953 -25.515 1.00 0.00 C ATOM 494 O PRO 34 42.930 6.958 -24.308 1.00 0.00 O ATOM 495 N LYS 35 42.002 7.948 -26.099 1.00 0.00 N ATOM 497 CA LYS 35 41.389 9.008 -25.318 1.00 0.00 C ATOM 499 CB LYS 35 40.753 10.098 -26.236 1.00 0.00 C ATOM 502 CG LYS 35 39.824 11.068 -25.476 1.00 0.00 C ATOM 505 CD LYS 35 39.149 12.166 -26.309 1.00 0.00 C ATOM 508 CE LYS 35 37.774 12.561 -25.736 1.00 0.00 C ATOM 511 NZ LYS 35 37.862 12.823 -24.283 1.00 0.00 N ATOM 515 C LYS 35 40.309 8.496 -24.363 1.00 0.00 C ATOM 516 O LYS 35 40.218 8.915 -23.207 1.00 0.00 O ATOM 517 N LEU 36 39.425 7.607 -24.852 1.00 0.00 N ATOM 519 CA LEU 36 38.337 7.046 -24.072 1.00 0.00 C ATOM 521 CB LEU 36 37.348 6.354 -25.052 1.00 0.00 C ATOM 524 CG LEU 36 35.961 5.934 -24.505 1.00 0.00 C ATOM 526 CD1 LEU 36 35.986 4.621 -23.710 1.00 0.00 C ATOM 530 CD2 LEU 36 35.267 7.041 -23.695 1.00 0.00 C ATOM 534 C LEU 36 38.839 6.095 -22.989 1.00 0.00 C ATOM 535 O LEU 36 38.456 6.198 -21.822 1.00 0.00 O ATOM 536 N ALA 37 39.774 5.191 -23.352 1.00 0.00 N ATOM 538 CA ALA 37 40.308 4.154 -22.491 1.00 0.00 C ATOM 540 CB ALA 37 41.273 3.272 -23.308 1.00 0.00 C ATOM 544 C ALA 37 41.008 4.672 -21.239 1.00 0.00 C ATOM 545 O ALA 37 40.797 4.175 -20.135 1.00 0.00 O ATOM 546 N VAL 38 41.829 5.731 -21.365 1.00 0.00 N ATOM 548 CA VAL 38 42.463 6.382 -20.229 1.00 0.00 C ATOM 550 CB VAL 38 43.550 7.345 -20.704 1.00 0.00 C ATOM 552 CG1 VAL 38 44.220 8.080 -19.524 1.00 0.00 C ATOM 556 CG2 VAL 38 44.621 6.535 -21.463 1.00 0.00 C ATOM 560 C VAL 38 41.469 7.069 -19.281 1.00 0.00 C ATOM 561 O VAL 38 41.602 7.032 -18.057 1.00 0.00 O ATOM 562 N ALA 39 40.426 7.736 -19.821 1.00 0.00 N ATOM 564 CA ALA 39 39.448 8.475 -19.039 1.00 0.00 C ATOM 566 CB ALA 39 38.587 9.303 -20.014 1.00 0.00 C ATOM 570 C ALA 39 38.533 7.636 -18.140 1.00 0.00 C ATOM 571 O ALA 39 38.291 7.989 -16.977 1.00 0.00 O ATOM 572 N TYR 40 38.017 6.522 -18.701 1.00 0.00 N ATOM 574 CA TYR 40 37.115 5.552 -18.097 1.00 0.00 C ATOM 576 CB TYR 40 35.908 6.183 -17.329 1.00 0.00 C ATOM 579 CG TYR 40 35.228 5.212 -16.405 1.00 0.00 C ATOM 580 CD1 TYR 40 35.728 4.997 -15.107 1.00 0.00 C ATOM 582 CE1 TYR 40 34.993 4.247 -14.176 1.00 0.00 C ATOM 584 CZ TYR 40 33.767 3.681 -14.551 1.00 0.00 C ATOM 585 OH TYR 40 32.947 3.023 -13.613 1.00 0.00 H ATOM 587 CD2 TYR 40 34.031 4.588 -16.788 1.00 0.00 C ATOM 589 CE2 TYR 40 33.306 3.825 -15.863 1.00 0.00 C ATOM 591 C TYR 40 36.540 4.714 -19.238 1.00 0.00 C ATOM 592 O TYR 40 35.710 5.243 -19.977 1.00 0.00 O ATOM 593 N PRO 41 36.902 3.454 -19.449 1.00 0.00 N ATOM 594 CD PRO 41 38.044 2.783 -18.824 1.00 0.00 C ATOM 597 CA PRO 41 36.199 2.611 -20.399 1.00 0.00 C ATOM 599 CB PRO 41 37.243 1.533 -20.755 1.00 0.00 C ATOM 602 CG PRO 41 38.205 1.444 -19.556 1.00 0.00 C ATOM 605 C PRO 41 34.950 2.048 -19.749 1.00 0.00 C ATOM 606 O PRO 41 33.852 2.501 -20.065 1.00 0.00 O ATOM 607 N SER 42 35.093 1.107 -18.804 1.00 0.00 N ATOM 609 CA SER 42 33.962 0.499 -18.136 1.00 0.00 C ATOM 611 CB SER 42 33.848 -0.971 -18.561 1.00 0.00 C ATOM 614 OG SER 42 35.011 -1.732 -18.211 1.00 0.00 O ATOM 616 C SER 42 34.033 0.510 -16.620 1.00 0.00 C ATOM 617 O SER 42 33.014 0.685 -15.959 1.00 0.00 O ATOM 618 N GLY 43 35.232 0.347 -16.018 1.00 0.00 N ATOM 620 CA GLY 43 35.384 0.476 -14.567 1.00 0.00 C ATOM 623 C GLY 43 36.393 -0.438 -13.940 1.00 0.00 C ATOM 624 O GLY 43 36.081 -1.205 -13.035 1.00 0.00 O ATOM 625 N VAL 44 37.659 -0.370 -14.388 1.00 0.00 N ATOM 627 CA VAL 44 38.755 -1.166 -13.846 1.00 0.00 C ATOM 629 CB VAL 44 39.839 -1.422 -14.901 1.00 0.00 C ATOM 631 CG1 VAL 44 40.561 -2.755 -14.612 1.00 0.00 C ATOM 635 CG2 VAL 44 39.183 -1.534 -16.294 1.00 0.00 C ATOM 639 C VAL 44 39.301 -0.569 -12.534 1.00 0.00 C ATOM 640 O VAL 44 38.576 -0.027 -11.702 1.00 0.00 O ATOM 641 N ILE 45 40.624 -0.618 -12.287 1.00 0.00 N ATOM 643 CA ILE 45 41.239 -0.238 -11.019 1.00 0.00 C ATOM 645 CB ILE 45 42.722 -0.614 -11.001 1.00 0.00 C ATOM 647 CG2 ILE 45 43.516 0.265 -11.982 1.00 0.00 C ATOM 651 CG1 ILE 45 43.385 -0.598 -9.601 1.00 0.00 C ATOM 654 CD1 ILE 45 42.746 -1.561 -8.592 1.00 0.00 C ATOM 658 C ILE 45 40.985 1.179 -10.469 1.00 0.00 C ATOM 659 O ILE 45 40.888 1.267 -9.242 1.00 0.00 O ATOM 660 N PRO 46 40.839 2.331 -11.158 1.00 0.00 N ATOM 661 CD PRO 46 41.017 2.529 -12.603 1.00 0.00 C ATOM 664 CA PRO 46 40.432 3.573 -10.493 1.00 0.00 C ATOM 666 CB PRO 46 40.518 4.640 -11.601 1.00 0.00 C ATOM 669 CG PRO 46 40.316 3.855 -12.899 1.00 0.00 C ATOM 672 C PRO 46 39.049 3.507 -9.861 1.00 0.00 C ATOM 673 O PRO 46 38.831 4.204 -8.877 1.00 0.00 O ATOM 674 N ASP 47 38.116 2.710 -10.414 1.00 0.00 N ATOM 676 CA ASP 47 36.775 2.526 -9.898 1.00 0.00 C ATOM 678 CB ASP 47 35.984 1.840 -11.031 1.00 0.00 C ATOM 681 CG ASP 47 34.506 2.020 -10.823 1.00 0.00 C ATOM 682 OD1 ASP 47 33.992 3.089 -11.234 1.00 0.00 O ATOM 683 OD2 ASP 47 33.873 1.081 -10.280 1.00 0.00 O ATOM 684 C ASP 47 36.758 1.684 -8.619 1.00 0.00 C ATOM 685 O ASP 47 36.131 2.006 -7.609 1.00 0.00 O ATOM 686 N MET 48 37.529 0.579 -8.634 1.00 0.00 N ATOM 688 CA MET 48 37.582 -0.402 -7.568 1.00 0.00 C ATOM 690 CB MET 48 38.232 -1.705 -8.095 1.00 0.00 C ATOM 693 CG MET 48 37.488 -2.352 -9.274 1.00 0.00 C ATOM 696 SD MET 48 38.293 -3.872 -9.846 1.00 0.00 S ATOM 697 CE MET 48 37.215 -4.062 -11.290 1.00 0.00 C ATOM 701 C MET 48 38.399 0.027 -6.359 1.00 0.00 C ATOM 702 O MET 48 38.362 -0.609 -5.309 1.00 0.00 O ATOM 703 N ARG 49 39.206 1.094 -6.470 1.00 0.00 N ATOM 705 CA ARG 49 40.131 1.510 -5.433 1.00 0.00 C ATOM 707 CB ARG 49 41.021 2.647 -5.986 1.00 0.00 C ATOM 710 CG ARG 49 42.193 3.037 -5.067 1.00 0.00 C ATOM 713 CD ARG 49 43.109 4.080 -5.707 1.00 0.00 C ATOM 716 NE ARG 49 44.157 4.405 -4.680 1.00 0.00 N ATOM 718 CZ ARG 49 45.471 4.167 -4.792 1.00 0.00 C ATOM 719 NH1 ARG 49 46.015 3.708 -5.915 1.00 0.00 H ATOM 722 NH2 ARG 49 46.267 4.400 -3.750 1.00 0.00 H ATOM 725 C ARG 49 39.493 1.923 -4.103 1.00 0.00 C ATOM 726 O ARG 49 38.965 3.018 -3.948 1.00 0.00 O ATOM 2865 N PHE 209 28.015 3.017 -11.455 1.00 0.00 N ATOM 2867 CA PHE 209 27.906 2.869 -10.012 1.00 0.00 C ATOM 2869 CB PHE 209 28.588 4.107 -9.363 1.00 0.00 C ATOM 2872 CG PHE 209 29.685 3.709 -8.429 1.00 0.00 C ATOM 2873 CD1 PHE 209 29.463 3.661 -7.042 1.00 0.00 C ATOM 2875 CE1 PHE 209 30.514 3.359 -6.166 1.00 0.00 C ATOM 2877 CZ PHE 209 31.791 3.099 -6.678 1.00 0.00 C ATOM 2879 CD2 PHE 209 30.966 3.422 -8.930 1.00 0.00 C ATOM 2881 CE2 PHE 209 32.017 3.121 -8.058 1.00 0.00 C ATOM 2883 C PHE 209 26.459 2.797 -9.523 1.00 0.00 C ATOM 2884 O PHE 209 26.063 1.952 -8.722 1.00 0.00 O ATOM 2885 N ASN 210 25.622 3.717 -10.027 1.00 0.00 N ATOM 2887 CA ASN 210 24.219 3.850 -9.698 1.00 0.00 C ATOM 2889 CB ASN 210 23.816 5.246 -10.272 1.00 0.00 C ATOM 2892 CG ASN 210 22.324 5.532 -10.355 1.00 0.00 C ATOM 2893 OD1 ASN 210 21.618 5.759 -9.369 1.00 0.00 O ATOM 2894 ND2 ASN 210 21.790 5.514 -11.601 1.00 0.00 N ATOM 2897 C ASN 210 23.310 2.736 -10.225 1.00 0.00 C ATOM 2898 O ASN 210 22.427 2.256 -9.516 1.00 0.00 O ATOM 2899 N TYR 211 23.445 2.340 -11.505 1.00 0.00 N ATOM 2901 CA TYR 211 22.470 1.494 -12.174 1.00 0.00 C ATOM 2903 CB TYR 211 22.681 1.522 -13.711 1.00 0.00 C ATOM 2906 CG TYR 211 21.523 1.024 -14.550 1.00 0.00 C ATOM 2907 CD1 TYR 211 20.194 0.878 -14.095 1.00 0.00 C ATOM 2909 CE1 TYR 211 19.183 0.442 -14.969 1.00 0.00 C ATOM 2911 CZ TYR 211 19.486 0.159 -16.304 1.00 0.00 C ATOM 2912 OH TYR 211 18.482 -0.272 -17.190 1.00 0.00 H ATOM 2914 CD2 TYR 211 21.798 0.736 -15.893 1.00 0.00 C ATOM 2916 CE2 TYR 211 20.794 0.304 -16.766 1.00 0.00 C ATOM 2918 C TYR 211 22.432 0.074 -11.631 1.00 0.00 C ATOM 2919 O TYR 211 21.356 -0.474 -11.403 1.00 0.00 O ATOM 2920 N ILE 212 23.604 -0.526 -11.335 1.00 0.00 N ATOM 2922 CA ILE 212 23.700 -1.866 -10.771 1.00 0.00 C ATOM 2924 CB ILE 212 25.146 -2.368 -10.718 1.00 0.00 C ATOM 2926 CG2 ILE 212 26.028 -1.463 -9.831 1.00 0.00 C ATOM 2930 CG1 ILE 212 25.256 -3.852 -10.288 1.00 0.00 C ATOM 2933 CD1 ILE 212 24.595 -4.833 -11.263 1.00 0.00 C ATOM 2937 C ILE 212 22.993 -2.001 -9.425 1.00 0.00 C ATOM 2938 O ILE 212 22.295 -2.978 -9.167 1.00 0.00 O ATOM 2939 N VAL 213 23.075 -0.976 -8.553 1.00 0.00 N ATOM 2941 CA VAL 213 22.346 -0.910 -7.292 1.00 0.00 C ATOM 2943 CB VAL 213 22.787 0.290 -6.459 1.00 0.00 C ATOM 2945 CG1 VAL 213 22.123 0.257 -5.067 1.00 0.00 C ATOM 2949 CG2 VAL 213 24.318 0.242 -6.293 1.00 0.00 C ATOM 2953 C VAL 213 20.833 -0.896 -7.486 1.00 0.00 C ATOM 2954 O VAL 213 20.079 -1.517 -6.747 1.00 0.00 O ATOM 2955 N ARG 214 20.327 -0.188 -8.513 1.00 0.00 N ATOM 2957 CA ARG 214 18.914 -0.233 -8.856 1.00 0.00 C ATOM 2959 CB ARG 214 18.547 0.887 -9.863 1.00 0.00 C ATOM 2962 CG ARG 214 18.913 2.295 -9.355 1.00 0.00 C ATOM 2965 CD ARG 214 18.402 3.417 -10.260 1.00 0.00 C ATOM 2968 NE ARG 214 19.005 4.686 -9.737 1.00 0.00 N ATOM 2970 CZ ARG 214 18.400 5.879 -9.634 1.00 0.00 C ATOM 2971 NH1 ARG 214 17.129 6.069 -9.961 1.00 0.00 H ATOM 2974 NH2 ARG 214 19.128 6.905 -9.203 1.00 0.00 H ATOM 2977 C ARG 214 18.444 -1.575 -9.416 1.00 0.00 C ATOM 2978 O ARG 214 17.348 -2.029 -9.102 1.00 0.00 O ATOM 2979 N LEU 215 19.244 -2.216 -10.290 1.00 0.00 N ATOM 2981 CA LEU 215 18.924 -3.514 -10.869 1.00 0.00 C ATOM 2983 CB LEU 215 19.864 -3.806 -12.070 1.00 0.00 C ATOM 2986 CG LEU 215 19.707 -2.870 -13.286 1.00 0.00 C ATOM 2988 CD1 LEU 215 20.821 -3.156 -14.304 1.00 0.00 C ATOM 2992 CD2 LEU 215 18.336 -3.021 -13.960 1.00 0.00 C ATOM 2996 C LEU 215 19.053 -4.702 -9.919 1.00 0.00 C ATOM 2997 O LEU 215 18.201 -5.586 -9.906 1.00 0.00 O ATOM 2998 N ALA 216 20.147 -4.766 -9.135 1.00 0.00 N ATOM 3000 CA ALA 216 20.525 -5.946 -8.380 1.00 0.00 C ATOM 3002 CB ALA 216 21.903 -6.421 -8.888 1.00 0.00 C ATOM 3006 C ALA 216 20.615 -5.688 -6.877 1.00 0.00 C ATOM 3007 O ALA 216 21.109 -6.516 -6.115 1.00 0.00 O ATOM 3008 NT ALA 216 20.135 -4.526 -6.397 1.00 0.00 N ATOM 3010 CAT ALA 216 20.165 -4.222 -4.984 1.00 0.00 C TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 435 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 65.92 59.8 97 86.6 112 ARMSMC SECONDARY STRUCTURE . . 24.54 87.5 24 70.6 34 ARMSMC SURFACE . . . . . . . . 68.46 54.7 75 89.3 84 ARMSMC BURIED . . . . . . . . 56.44 77.3 22 78.6 28 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 76.67 36.8 38 82.6 46 ARMSSC1 RELIABLE SIDE CHAINS . 79.73 31.4 35 83.3 42 ARMSSC1 SECONDARY STRUCTURE . . 70.24 44.4 9 64.3 14 ARMSSC1 SURFACE . . . . . . . . 70.56 41.9 31 86.1 36 ARMSSC1 BURIED . . . . . . . . 99.30 14.3 7 70.0 10 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 74.87 37.9 29 82.9 35 ARMSSC2 RELIABLE SIDE CHAINS . 72.17 37.0 27 87.1 31 ARMSSC2 SECONDARY STRUCTURE . . 86.52 50.0 8 66.7 12 ARMSSC2 SURFACE . . . . . . . . 67.37 36.4 22 84.6 26 ARMSSC2 BURIED . . . . . . . . 94.64 42.9 7 77.8 9 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 93.85 14.3 7 70.0 10 ARMSSC3 RELIABLE SIDE CHAINS . 94.42 16.7 6 66.7 9 ARMSSC3 SECONDARY STRUCTURE . . 59.61 0.0 1 33.3 3 ARMSSC3 SURFACE . . . . . . . . 100.93 0.0 6 66.7 9 ARMSSC3 BURIED . . . . . . . . 22.84 100.0 1 100.0 1 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 89.06 0.0 3 75.0 4 ARMSSC4 RELIABLE SIDE CHAINS . 89.06 0.0 3 75.0 4 ARMSSC4 SECONDARY STRUCTURE . . 94.54 0.0 1 50.0 2 ARMSSC4 SURFACE . . . . . . . . 89.06 0.0 3 75.0 4 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 10.49 (Number of atoms: 57) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 10.49 57 100.0 57 CRMSCA CRN = ALL/NP . . . . . 0.1841 CRMSCA SECONDARY STRUCTURE . . 10.18 17 100.0 17 CRMSCA SURFACE . . . . . . . . 10.70 43 100.0 43 CRMSCA BURIED . . . . . . . . 9.83 14 100.0 14 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 10.55 281 100.0 281 CRMSMC SECONDARY STRUCTURE . . 10.19 85 100.0 85 CRMSMC SURFACE . . . . . . . . 10.70 213 100.0 213 CRMSMC BURIED . . . . . . . . 10.05 68 100.0 68 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 11.57 207 99.5 208 CRMSSC RELIABLE SIDE CHAINS . 11.30 189 99.5 190 CRMSSC SECONDARY STRUCTURE . . 12.20 72 100.0 72 CRMSSC SURFACE . . . . . . . . 12.06 159 99.4 160 CRMSSC BURIED . . . . . . . . 9.80 48 100.0 48 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 11.01 435 99.8 436 CRMSALL SECONDARY STRUCTURE . . 11.19 140 100.0 140 CRMSALL SURFACE . . . . . . . . 11.31 331 99.7 332 CRMSALL BURIED . . . . . . . . 10.01 104 100.0 104 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 9.863 1.000 0.500 57 100.0 57 ERRCA SECONDARY STRUCTURE . . 9.179 1.000 0.500 17 100.0 17 ERRCA SURFACE . . . . . . . . 10.091 1.000 0.500 43 100.0 43 ERRCA BURIED . . . . . . . . 9.163 1.000 0.500 14 100.0 14 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 9.885 1.000 0.500 281 100.0 281 ERRMC SECONDARY STRUCTURE . . 9.123 1.000 0.500 85 100.0 85 ERRMC SURFACE . . . . . . . . 10.060 1.000 0.500 213 100.0 213 ERRMC BURIED . . . . . . . . 9.340 1.000 0.500 68 100.0 68 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 10.621 1.000 0.500 207 99.5 208 ERRSC RELIABLE SIDE CHAINS . 10.369 1.000 0.500 189 99.5 190 ERRSC SECONDARY STRUCTURE . . 10.853 1.000 0.500 72 100.0 72 ERRSC SURFACE . . . . . . . . 11.066 1.000 0.500 159 99.4 160 ERRSC BURIED . . . . . . . . 9.145 1.000 0.500 48 100.0 48 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 10.202 1.000 0.500 435 99.8 436 ERRALL SECONDARY STRUCTURE . . 9.930 1.000 0.500 140 100.0 140 ERRALL SURFACE . . . . . . . . 10.482 1.000 0.500 331 99.7 332 ERRALL BURIED . . . . . . . . 9.312 1.000 0.500 104 100.0 104 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 1 2 3 30 57 57 DISTCA CA (P) 0.00 1.75 3.51 5.26 52.63 57 DISTCA CA (RMS) 0.00 1.95 2.43 3.42 7.40 DISTCA ALL (N) 0 2 9 36 228 435 436 DISTALL ALL (P) 0.00 0.46 2.06 8.26 52.29 436 DISTALL ALL (RMS) 0.00 1.67 2.43 3.93 7.36 DISTALL END of the results output