####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 46 ( 345), selected 46 , name T0629TS207_1-D1 # Molecule2: number of CA atoms 57 ( 436), selected 46 , name T0629-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0629TS207_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 27 - 47 4.92 21.46 LONGEST_CONTINUOUS_SEGMENT: 21 28 - 48 4.78 21.69 LCS_AVERAGE: 29.79 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 32 - 44 1.93 25.13 LCS_AVERAGE: 13.81 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 35 - 42 0.94 22.86 LCS_AVERAGE: 8.43 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 46 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT P 12 P 12 3 3 11 0 3 3 3 6 7 10 10 12 14 15 17 19 21 22 25 26 27 28 29 LCS_GDT S 13 S 13 4 4 13 3 4 5 6 6 6 10 10 10 13 15 16 19 21 21 25 26 27 28 29 LCS_GDT D 14 D 14 4 4 13 3 4 5 6 6 7 10 10 12 14 16 17 19 21 23 25 26 27 28 29 LCS_GDT S 15 S 15 4 4 13 3 4 5 6 6 8 10 10 13 15 17 19 21 22 23 25 26 27 28 29 LCS_GDT V 16 V 16 4 4 13 3 3 4 6 6 8 10 10 13 15 17 19 21 22 23 25 26 27 28 29 LCS_GDT P 17 P 17 4 5 13 3 4 4 4 6 8 10 10 12 14 16 19 21 22 23 25 26 27 28 29 LCS_GDT A 18 A 18 4 5 14 3 4 4 4 6 8 8 10 12 14 15 17 19 22 23 24 26 26 28 29 LCS_GDT G 19 G 19 4 5 15 3 4 4 4 5 5 6 7 9 10 12 17 19 21 23 24 26 26 28 29 LCS_GDT F 20 F 20 4 5 19 3 4 5 6 6 6 7 10 11 14 17 19 21 22 23 25 26 27 28 29 LCS_GDT A 21 A 21 3 5 19 3 4 5 6 6 6 8 9 13 15 17 19 21 22 23 25 26 27 28 29 LCS_GDT L 22 L 22 3 4 19 3 3 3 5 5 6 8 10 13 15 17 19 21 22 23 25 26 27 28 29 LCS_GDT M 23 M 23 4 6 19 3 3 5 5 5 6 8 9 10 12 17 18 21 22 23 23 26 26 28 29 LCS_GDT E 24 E 24 4 6 19 3 3 4 5 5 6 7 8 13 15 17 19 21 22 23 25 26 27 28 29 LCS_GDT G 25 G 25 4 6 19 3 4 5 5 7 10 11 12 14 15 17 19 21 22 23 25 26 27 28 29 LCS_GDT Q 26 Q 26 4 8 19 3 4 5 5 7 10 11 12 14 15 17 19 21 22 23 25 26 27 28 29 LCS_GDT T 27 T 27 5 10 21 3 4 5 6 9 10 12 13 14 15 16 17 18 20 23 25 26 27 28 29 LCS_GDT F 28 F 28 5 10 21 3 4 6 7 9 10 12 13 14 15 17 18 21 22 23 25 26 27 28 29 LCS_GDT D 29 D 29 5 10 21 3 4 5 6 9 10 12 13 16 16 17 19 21 22 23 25 26 27 28 29 LCS_GDT K 30 K 30 6 10 21 5 6 6 7 9 10 12 14 16 16 17 19 21 22 23 25 26 27 28 29 LCS_GDT S 31 S 31 6 12 21 5 6 6 7 9 10 14 14 16 16 17 19 21 22 23 25 26 27 28 29 LCS_GDT A 32 A 32 6 13 21 5 6 7 11 12 13 14 14 16 16 17 19 21 22 23 25 26 27 28 29 LCS_GDT Y 33 Y 33 6 13 21 5 6 9 11 12 13 14 14 16 16 17 19 21 22 23 25 26 27 28 29 LCS_GDT P 34 P 34 6 13 21 4 6 7 11 12 13 14 14 16 16 17 19 21 22 23 25 26 27 28 29 LCS_GDT K 35 K 35 8 13 21 5 6 9 11 12 13 14 14 16 16 17 18 21 22 23 25 26 27 28 29 LCS_GDT L 36 L 36 8 13 21 4 6 9 11 12 13 14 14 16 16 17 19 21 22 23 25 26 27 28 29 LCS_GDT A 37 A 37 8 13 21 4 5 9 11 12 13 14 14 16 16 17 19 21 22 23 25 26 27 28 29 LCS_GDT V 38 V 38 8 13 21 4 6 9 11 12 13 14 14 16 16 17 19 21 22 23 25 26 27 28 29 LCS_GDT A 39 A 39 8 13 21 4 6 9 11 12 13 14 14 16 16 17 19 21 22 23 25 26 27 28 29 LCS_GDT Y 40 Y 40 8 13 21 4 6 9 11 12 13 14 14 16 16 17 17 19 22 23 25 26 27 28 29 LCS_GDT P 41 P 41 8 13 21 4 6 9 11 12 13 14 14 16 16 17 17 19 22 23 24 26 27 28 29 LCS_GDT S 42 S 42 8 13 21 4 6 9 11 12 13 14 14 16 16 17 17 19 21 21 23 25 25 27 29 LCS_GDT G 43 G 43 5 13 21 3 5 5 5 6 10 11 13 14 15 15 17 18 21 21 23 25 25 27 29 LCS_GDT V 44 V 44 4 13 21 3 4 4 10 12 13 14 14 16 16 17 17 19 21 21 23 25 25 27 29 LCS_GDT I 45 I 45 4 11 21 3 4 5 7 10 13 14 14 16 16 17 17 17 19 21 23 25 25 27 29 LCS_GDT P 46 P 46 4 6 21 3 4 5 9 10 13 13 14 16 16 17 17 17 19 21 22 25 25 26 28 LCS_GDT D 47 D 47 4 6 21 3 4 5 6 8 11 12 13 16 16 17 17 17 19 20 22 25 25 26 27 LCS_GDT M 48 M 48 3 5 21 3 3 3 4 4 6 7 9 12 13 14 15 17 19 20 22 25 25 26 27 LCS_GDT R 49 R 49 3 3 17 3 3 3 3 4 4 4 5 5 9 9 12 15 17 21 23 23 24 25 27 LCS_GDT F 209 F 209 4 5 8 4 4 4 5 5 5 7 7 10 12 13 14 16 20 21 23 25 25 27 29 LCS_GDT N 210 N 210 4 5 8 4 4 4 5 5 7 7 8 10 12 13 15 16 18 21 23 25 25 27 29 LCS_GDT Y 211 Y 211 4 5 8 4 4 4 5 5 7 7 8 10 12 13 14 16 17 21 23 23 24 25 28 LCS_GDT I 212 I 212 4 5 8 4 4 4 5 5 6 7 8 9 12 13 14 16 17 21 23 23 24 27 29 LCS_GDT V 213 V 213 3 5 8 3 3 3 5 5 5 7 7 9 10 12 14 16 17 21 23 23 24 25 28 LCS_GDT R 214 R 214 3 4 8 3 3 3 4 5 5 7 9 9 10 12 14 16 17 21 23 23 24 24 26 LCS_GDT L 215 L 215 3 4 8 3 3 3 4 5 5 6 7 9 10 11 14 16 17 21 23 23 24 24 26 LCS_GDT A 216 A 216 3 3 8 3 3 3 3 4 5 7 7 9 9 10 14 16 17 21 23 23 24 25 29 LCS_AVERAGE LCS_A: 17.34 ( 8.43 13.81 29.79 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 5 6 9 11 12 13 14 14 16 16 17 19 21 22 23 25 26 27 28 29 GDT PERCENT_AT 8.77 10.53 15.79 19.30 21.05 22.81 24.56 24.56 28.07 28.07 29.82 33.33 36.84 38.60 40.35 43.86 45.61 47.37 49.12 50.88 GDT RMS_LOCAL 0.39 0.56 0.96 1.36 1.48 1.71 2.10 2.10 2.62 2.62 3.47 4.40 4.65 4.76 4.97 5.50 5.70 5.87 6.09 6.32 GDT RMS_ALL_AT 19.08 19.19 23.57 24.98 24.79 24.49 24.97 24.97 24.37 24.37 21.18 13.29 13.47 13.51 13.71 12.90 12.59 12.40 13.06 12.84 # Checking swapping # possible swapping detected: D 29 D 29 # possible swapping detected: Y 33 Y 33 # possible swapping detected: D 47 D 47 # possible swapping detected: Y 211 Y 211 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA P 12 P 12 44.314 0 0.330 0.321 45.200 0.000 0.000 LGA S 13 S 13 40.831 0 0.597 0.841 41.650 0.000 0.000 LGA D 14 D 14 41.603 0 0.224 1.250 45.317 0.000 0.000 LGA S 15 S 15 42.231 0 0.582 0.546 46.121 0.000 0.000 LGA V 16 V 16 35.497 0 0.566 0.549 37.617 0.000 0.000 LGA P 17 P 17 34.011 0 0.675 0.693 34.478 0.000 0.000 LGA A 18 A 18 35.202 0 0.582 0.572 37.180 0.000 0.000 LGA G 19 G 19 31.296 0 0.181 0.181 32.421 0.000 0.000 LGA F 20 F 20 28.419 0 0.613 1.267 29.558 0.000 0.000 LGA A 21 A 21 29.138 0 0.600 0.578 30.891 0.000 0.000 LGA L 22 L 22 34.574 0 0.572 1.167 40.672 0.000 0.000 LGA M 23 M 23 32.484 0 0.569 1.135 33.651 0.000 0.000 LGA E 24 E 24 30.321 0 0.283 1.259 31.590 0.000 0.000 LGA G 25 G 25 28.081 0 0.076 0.076 28.658 0.000 0.000 LGA Q 26 Q 26 22.740 0 0.163 1.225 24.637 0.000 0.000 LGA T 27 T 27 16.104 0 0.090 0.145 18.506 0.000 0.000 LGA F 28 F 28 13.189 0 0.045 1.427 13.769 0.000 0.000 LGA D 29 D 29 9.842 0 0.087 0.858 11.244 5.952 2.976 LGA K 30 K 30 5.153 0 0.559 0.919 11.454 28.452 18.042 LGA S 31 S 31 4.227 0 0.098 0.115 6.121 43.690 37.222 LGA A 32 A 32 1.393 0 0.116 0.113 2.905 73.214 73.143 LGA Y 33 Y 33 2.396 1 0.312 1.116 11.173 77.262 31.865 LGA P 34 P 34 0.985 0 0.184 0.328 2.253 92.857 81.973 LGA K 35 K 35 0.594 0 0.109 1.443 8.233 85.952 58.624 LGA L 36 L 36 1.887 0 0.036 1.047 4.807 75.000 62.857 LGA A 37 A 37 1.714 0 0.165 0.171 2.358 79.405 76.476 LGA V 38 V 38 1.160 0 0.092 1.226 2.584 81.548 75.578 LGA A 39 A 39 1.621 0 0.135 0.135 2.582 77.143 73.143 LGA Y 40 Y 40 1.266 1 0.084 0.191 2.690 73.214 69.762 LGA P 41 P 41 1.630 0 0.362 0.363 3.243 67.262 73.333 LGA S 42 S 42 2.298 0 0.735 0.830 5.726 49.048 49.683 LGA G 43 G 43 5.960 0 0.136 0.136 5.960 27.857 27.857 LGA V 44 V 44 1.974 0 0.149 1.214 4.842 72.857 61.429 LGA I 45 I 45 3.274 0 0.096 0.682 5.671 40.000 37.917 LGA P 46 P 46 6.110 0 0.463 0.549 8.001 15.119 16.463 LGA D 47 D 47 10.392 0 0.594 1.168 14.588 0.714 0.357 LGA M 48 M 48 15.787 0 0.223 1.161 19.620 0.000 0.000 LGA R 49 R 49 18.348 2 0.277 0.904 19.281 0.000 0.000 LGA F 209 F 209 42.864 0 0.067 1.393 49.958 0.000 0.000 LGA N 210 N 210 39.345 0 0.091 0.840 41.042 0.000 0.000 LGA Y 211 Y 211 38.227 1 0.113 0.255 45.223 0.000 0.000 LGA I 212 I 212 32.798 0 0.075 0.135 34.975 0.000 0.000 LGA V 213 V 213 30.533 0 0.436 0.890 30.881 0.000 0.000 LGA R 214 R 214 31.944 2 0.472 1.132 35.087 0.000 0.000 LGA L 215 L 215 29.611 0 0.086 0.170 34.268 0.000 0.000 LGA A 216 A 216 24.978 0 0.110 0.180 27.078 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 46 184 184 100.00 352 345 98.01 57 SUMMARY(RMSD_GDC): 9.916 9.800 10.640 18.711 16.293 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 46 57 4.0 14 2.10 24.561 22.257 0.638 LGA_LOCAL RMSD: 2.096 Number of atoms: 14 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 24.967 Number of assigned atoms: 46 Std_ASGN_ATOMS RMSD: 9.916 Standard rmsd on all 46 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.176358 * X + -0.981450 * Y + 0.075194 * Z + 57.936050 Y_new = -0.979847 * X + -0.167763 * Y + 0.108423 * Z + 61.194397 Z_new = -0.093797 * X + -0.092800 * Y + -0.991257 * Z + -0.224224 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.392718 0.093935 -3.048246 [DEG: -79.7968 5.3821 -174.6516 ] ZXZ: 2.535227 3.009261 -2.350850 [DEG: 145.2578 172.4179 -134.6938 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0629TS207_1-D1 REMARK 2: T0629-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0629TS207_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 46 57 4.0 14 2.10 22.257 9.92 REMARK ---------------------------------------------------------- MOLECULE T0629TS207_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0629 REMARK MODEL 1 REMARK PARENT 2PFC_A 1JGT_A 1VPD_A 3FFV_A ATOM 1 N PRO 12 57.271 20.362 -28.381 1.00 0.00 N ATOM 2 CA PRO 12 56.711 19.291 -29.248 1.00 0.00 C ATOM 3 CD PRO 12 58.421 19.812 -27.586 1.00 0.00 C ATOM 4 CB PRO 12 57.654 18.097 -29.118 1.00 0.00 C ATOM 5 CG PRO 12 58.331 18.294 -27.756 1.00 0.00 C ATOM 6 C PRO 12 55.331 18.989 -28.763 1.00 0.00 C ATOM 7 O PRO 12 54.407 18.967 -29.575 1.00 0.00 O ATOM 8 N SER 13 55.172 18.737 -27.449 1.00 0.00 N ATOM 9 CA SER 13 53.891 18.421 -26.889 1.00 0.00 C ATOM 10 CB SER 13 53.965 18.151 -25.378 1.00 0.00 C ATOM 11 OG SER 13 54.893 17.111 -25.111 1.00 0.00 O ATOM 12 C SER 13 53.008 19.617 -27.049 1.00 0.00 C ATOM 13 O SER 13 51.848 19.506 -27.428 1.00 0.00 O ATOM 14 N ASP 14 53.546 20.812 -26.779 1.00 0.00 N ATOM 15 CA ASP 14 52.769 22.016 -26.845 1.00 0.00 C ATOM 16 CB ASP 14 53.685 23.222 -26.562 1.00 0.00 C ATOM 17 CG ASP 14 52.946 24.551 -26.628 1.00 0.00 C ATOM 18 OD1 ASP 14 51.761 24.585 -27.050 1.00 0.00 O ATOM 19 OD2 ASP 14 53.593 25.569 -26.269 1.00 0.00 O ATOM 20 C ASP 14 52.233 22.160 -28.231 1.00 0.00 C ATOM 21 O ASP 14 51.041 22.397 -28.436 1.00 0.00 O ATOM 22 N SER 15 53.109 21.983 -29.229 1.00 0.00 N ATOM 23 CA SER 15 52.694 22.200 -30.578 1.00 0.00 C ATOM 24 CB SER 15 53.838 22.067 -31.598 1.00 0.00 C ATOM 25 OG SER 15 54.777 23.117 -31.424 1.00 0.00 O ATOM 26 C SER 15 51.642 21.220 -30.972 1.00 0.00 C ATOM 27 O SER 15 50.654 21.596 -31.597 1.00 0.00 O ATOM 28 N VAL 16 51.810 19.939 -30.596 1.00 0.00 N ATOM 29 CA VAL 16 50.925 18.941 -31.128 1.00 0.00 C ATOM 30 CB VAL 16 51.360 17.546 -30.770 1.00 0.00 C ATOM 31 CG1 VAL 16 50.356 16.550 -31.371 1.00 0.00 C ATOM 32 CG2 VAL 16 52.810 17.353 -31.244 1.00 0.00 C ATOM 33 C VAL 16 49.485 19.181 -30.735 1.00 0.00 C ATOM 34 O VAL 16 48.658 19.327 -31.635 1.00 0.00 O ATOM 35 N PRO 17 49.094 19.278 -29.487 1.00 0.00 N ATOM 36 CA PRO 17 47.700 19.520 -29.269 1.00 0.00 C ATOM 37 CD PRO 17 49.553 18.324 -28.493 1.00 0.00 C ATOM 38 CB PRO 17 47.406 19.176 -27.806 1.00 0.00 C ATOM 39 CG PRO 17 48.756 18.706 -27.240 1.00 0.00 C ATOM 40 C PRO 17 47.231 20.866 -29.704 1.00 0.00 C ATOM 41 O PRO 17 46.030 21.018 -29.913 1.00 0.00 O ATOM 42 N ALA 18 48.125 21.863 -29.834 1.00 0.00 N ATOM 43 CA ALA 18 47.643 23.144 -30.252 1.00 0.00 C ATOM 44 CB ALA 18 48.753 24.206 -30.345 1.00 0.00 C ATOM 45 C ALA 18 47.067 22.980 -31.620 1.00 0.00 C ATOM 46 O ALA 18 45.973 23.455 -31.913 1.00 0.00 O ATOM 47 N GLY 19 47.789 22.267 -32.500 1.00 0.00 N ATOM 48 CA GLY 19 47.327 22.117 -33.846 1.00 0.00 C ATOM 49 C GLY 19 46.056 21.327 -33.870 1.00 0.00 C ATOM 50 O GLY 19 45.136 21.642 -34.622 1.00 0.00 O ATOM 51 N PHE 20 45.983 20.257 -33.057 1.00 0.00 N ATOM 52 CA PHE 20 44.851 19.377 -33.060 1.00 0.00 C ATOM 53 CB PHE 20 45.096 18.104 -32.232 1.00 0.00 C ATOM 54 CG PHE 20 44.243 17.031 -32.822 1.00 0.00 C ATOM 55 CD1 PHE 20 44.632 16.456 -34.011 1.00 0.00 C ATOM 56 CD2 PHE 20 43.094 16.581 -32.215 1.00 0.00 C ATOM 57 CE1 PHE 20 43.892 15.460 -34.601 1.00 0.00 C ATOM 58 CE2 PHE 20 42.347 15.583 -32.802 1.00 0.00 C ATOM 59 CZ PHE 20 42.743 15.023 -33.994 1.00 0.00 C ATOM 60 C PHE 20 43.693 20.128 -32.501 1.00 0.00 C ATOM 61 O PHE 20 42.554 19.952 -32.922 1.00 0.00 O ATOM 62 N ALA 21 43.960 20.991 -31.511 1.00 0.00 N ATOM 63 CA ALA 21 42.916 21.761 -30.918 1.00 0.00 C ATOM 64 CB ALA 21 43.435 22.764 -29.878 1.00 0.00 C ATOM 65 C ALA 21 42.321 22.592 -31.998 1.00 0.00 C ATOM 66 O ALA 21 41.106 22.746 -32.072 1.00 0.00 O ATOM 67 N LEU 22 43.155 23.181 -32.873 1.00 0.00 N ATOM 68 CA LEU 22 42.523 24.033 -33.833 1.00 0.00 C ATOM 69 CB LEU 22 43.515 24.840 -34.699 1.00 0.00 C ATOM 70 CG LEU 22 42.851 25.815 -35.702 1.00 0.00 C ATOM 71 CD1 LEU 22 42.261 25.104 -36.933 1.00 0.00 C ATOM 72 CD2 LEU 22 41.820 26.706 -34.988 1.00 0.00 C ATOM 73 C LEU 22 41.632 23.239 -34.751 1.00 0.00 C ATOM 74 O LEU 22 40.441 23.526 -34.861 1.00 0.00 O ATOM 75 N MET 23 42.184 22.212 -35.434 1.00 0.00 N ATOM 76 CA MET 23 41.419 21.451 -36.388 1.00 0.00 C ATOM 77 CB MET 23 42.295 20.456 -37.169 1.00 0.00 C ATOM 78 CG MET 23 41.498 19.508 -38.073 1.00 0.00 C ATOM 79 SD MET 23 40.724 20.291 -39.518 1.00 0.00 S ATOM 80 CE MET 23 39.964 18.760 -40.132 1.00 0.00 C ATOM 81 C MET 23 40.340 20.649 -35.741 1.00 0.00 C ATOM 82 O MET 23 39.176 20.720 -36.122 1.00 0.00 O ATOM 83 N GLU 24 40.709 19.835 -34.750 1.00 0.00 N ATOM 84 CA GLU 24 39.778 18.973 -34.097 1.00 0.00 C ATOM 85 CB GLU 24 40.481 17.851 -33.326 1.00 0.00 C ATOM 86 CG GLU 24 39.601 16.622 -33.152 1.00 0.00 C ATOM 87 CD GLU 24 39.373 16.100 -34.559 1.00 0.00 C ATOM 88 OE1 GLU 24 38.594 16.744 -35.312 1.00 0.00 O ATOM 89 OE2 GLU 24 39.991 15.063 -34.910 1.00 0.00 O ATOM 90 C GLU 24 38.940 19.730 -33.125 1.00 0.00 C ATOM 91 O GLU 24 37.740 19.499 -33.019 1.00 0.00 O ATOM 92 N GLY 25 39.562 20.658 -32.377 1.00 0.00 N ATOM 93 CA GLY 25 38.850 21.372 -31.359 1.00 0.00 C ATOM 94 C GLY 25 38.819 20.479 -30.165 1.00 0.00 C ATOM 95 O GLY 25 38.172 20.777 -29.163 1.00 0.00 O ATOM 96 N GLN 26 39.539 19.344 -30.261 1.00 0.00 N ATOM 97 CA GLN 26 39.547 18.377 -29.209 1.00 0.00 C ATOM 98 CB GLN 26 38.558 17.219 -29.466 1.00 0.00 C ATOM 99 CG GLN 26 38.336 16.289 -28.270 1.00 0.00 C ATOM 100 CD GLN 26 37.590 15.062 -28.757 1.00 0.00 C ATOM 101 OE1 GLN 26 36.625 14.618 -28.138 1.00 0.00 O ATOM 102 NE2 GLN 26 38.057 14.487 -29.898 1.00 0.00 N ATOM 103 C GLN 26 40.921 17.791 -29.151 1.00 0.00 C ATOM 104 O GLN 26 41.841 18.251 -29.827 1.00 0.00 O ATOM 105 N THR 27 41.101 16.771 -28.295 1.00 0.00 N ATOM 106 CA THR 27 42.355 16.102 -28.218 1.00 0.00 C ATOM 107 CB THR 27 42.518 15.281 -26.976 1.00 0.00 C ATOM 108 OG1 THR 27 41.427 14.384 -26.828 1.00 0.00 O ATOM 109 CG2 THR 27 42.594 16.238 -25.778 1.00 0.00 C ATOM 110 C THR 27 42.451 15.240 -29.426 1.00 0.00 C ATOM 111 O THR 27 41.513 15.116 -30.210 1.00 0.00 O ATOM 112 N PHE 28 43.615 14.610 -29.593 1.00 0.00 N ATOM 113 CA PHE 28 43.960 13.891 -30.779 1.00 0.00 C ATOM 114 CB PHE 28 45.268 13.099 -30.642 1.00 0.00 C ATOM 115 CG PHE 28 46.278 13.990 -30.000 1.00 0.00 C ATOM 116 CD1 PHE 28 46.833 15.066 -30.656 1.00 0.00 C ATOM 117 CD2 PHE 28 46.686 13.715 -28.715 1.00 0.00 C ATOM 118 CE1 PHE 28 47.765 15.864 -30.031 1.00 0.00 C ATOM 119 CE2 PHE 28 47.615 14.505 -28.086 1.00 0.00 C ATOM 120 CZ PHE 28 48.156 15.582 -28.743 1.00 0.00 C ATOM 121 C PHE 28 42.896 12.886 -31.088 1.00 0.00 C ATOM 122 O PHE 28 42.175 12.430 -30.203 1.00 0.00 O ATOM 123 N ASP 29 42.785 12.529 -32.387 1.00 0.00 N ATOM 124 CA ASP 29 41.789 11.596 -32.829 1.00 0.00 C ATOM 125 CB ASP 29 41.941 11.161 -34.295 1.00 0.00 C ATOM 126 CG ASP 29 41.347 12.251 -35.165 1.00 0.00 C ATOM 127 OD1 ASP 29 40.137 12.539 -34.965 1.00 0.00 O ATOM 128 OD2 ASP 29 42.080 12.811 -36.022 1.00 0.00 O ATOM 129 C ASP 29 41.910 10.378 -31.999 1.00 0.00 C ATOM 130 O ASP 29 42.973 9.763 -31.912 1.00 0.00 O ATOM 131 N LYS 30 40.763 10.020 -31.394 1.00 0.00 N ATOM 132 CA LYS 30 40.646 8.958 -30.450 1.00 0.00 C ATOM 133 CB LYS 30 39.444 9.152 -29.510 1.00 0.00 C ATOM 134 CG LYS 30 39.478 10.457 -28.710 1.00 0.00 C ATOM 135 CD LYS 30 38.155 10.802 -28.019 1.00 0.00 C ATOM 136 CE LYS 30 37.158 11.562 -28.899 1.00 0.00 C ATOM 137 NZ LYS 30 36.279 10.609 -29.610 1.00 0.00 N ATOM 138 C LYS 30 40.381 7.690 -31.176 1.00 0.00 C ATOM 139 O LYS 30 39.231 7.289 -31.347 1.00 0.00 O ATOM 140 N SER 31 41.437 7.048 -31.692 1.00 0.00 N ATOM 141 CA SER 31 41.196 5.749 -32.224 1.00 0.00 C ATOM 142 CB SER 31 42.338 5.256 -33.126 1.00 0.00 C ATOM 143 OG SER 31 42.472 6.116 -34.249 1.00 0.00 O ATOM 144 C SER 31 41.117 4.856 -31.033 1.00 0.00 C ATOM 145 O SER 31 40.185 4.064 -30.891 1.00 0.00 O ATOM 146 N ALA 32 42.165 4.954 -30.179 1.00 0.00 N ATOM 147 CA ALA 32 42.326 4.210 -28.960 1.00 0.00 C ATOM 148 CB ALA 32 43.757 4.289 -28.399 1.00 0.00 C ATOM 149 C ALA 32 41.405 4.665 -27.865 1.00 0.00 C ATOM 150 O ALA 32 40.735 3.864 -27.219 1.00 0.00 O ATOM 151 N TYR 33 41.371 5.983 -27.610 1.00 0.00 N ATOM 152 CA TYR 33 40.622 6.601 -26.550 1.00 0.00 C ATOM 153 CB TYR 33 41.296 7.645 -25.642 1.00 0.00 C ATOM 154 CG TYR 33 41.735 8.929 -26.241 1.00 0.00 C ATOM 155 CD1 TYR 33 42.740 8.975 -27.171 1.00 0.00 C ATOM 156 CD2 TYR 33 41.181 10.108 -25.795 1.00 0.00 C ATOM 157 CE1 TYR 33 43.150 10.185 -27.673 1.00 0.00 C ATOM 158 CE2 TYR 33 41.592 11.321 -26.296 1.00 0.00 C ATOM 159 CZ TYR 33 42.582 11.353 -27.246 1.00 0.00 C ATOM 161 C TYR 33 39.200 6.980 -26.777 1.00 0.00 C ATOM 162 O TYR 33 38.763 7.709 -25.896 1.00 0.00 O ATOM 163 N PRO 34 38.496 6.716 -27.865 1.00 0.00 N ATOM 164 CA PRO 34 37.229 7.368 -28.166 1.00 0.00 C ATOM 165 CD PRO 34 38.543 5.390 -28.456 1.00 0.00 C ATOM 166 CB PRO 34 36.485 6.452 -29.140 1.00 0.00 C ATOM 167 CG PRO 34 37.541 5.443 -29.617 1.00 0.00 C ATOM 168 C PRO 34 36.339 7.753 -27.019 1.00 0.00 C ATOM 169 O PRO 34 36.326 8.914 -26.646 1.00 0.00 O ATOM 170 N LYS 35 35.629 6.844 -26.381 1.00 0.00 N ATOM 171 CA LYS 35 34.834 7.260 -25.265 1.00 0.00 C ATOM 172 CB LYS 35 33.763 6.228 -24.919 1.00 0.00 C ATOM 173 CG LYS 35 34.363 4.861 -24.627 1.00 0.00 C ATOM 174 CD LYS 35 33.344 3.902 -24.027 1.00 0.00 C ATOM 175 CE LYS 35 32.496 4.560 -22.942 1.00 0.00 C ATOM 176 NZ LYS 35 33.373 5.051 -21.858 1.00 0.00 N ATOM 177 C LYS 35 35.724 7.461 -24.088 1.00 0.00 C ATOM 178 O LYS 35 35.336 8.050 -23.084 1.00 0.00 O ATOM 179 N LEU 36 36.945 6.924 -24.189 1.00 0.00 N ATOM 180 CA LEU 36 37.902 6.863 -23.130 1.00 0.00 C ATOM 181 CB LEU 36 39.214 6.199 -23.563 1.00 0.00 C ATOM 182 CG LEU 36 39.032 4.728 -23.967 1.00 0.00 C ATOM 183 CD1 LEU 36 38.172 4.603 -25.235 1.00 0.00 C ATOM 184 CD2 LEU 36 40.385 4.013 -24.085 1.00 0.00 C ATOM 185 C LEU 36 38.237 8.215 -22.614 1.00 0.00 C ATOM 186 O LEU 36 38.440 8.349 -21.410 1.00 0.00 O ATOM 187 N ALA 37 38.284 9.240 -23.488 1.00 0.00 N ATOM 188 CA ALA 37 38.695 10.552 -23.083 1.00 0.00 C ATOM 189 CB ALA 37 38.504 11.595 -24.193 1.00 0.00 C ATOM 190 C ALA 37 37.815 10.953 -21.954 1.00 0.00 C ATOM 191 O ALA 37 38.287 11.396 -20.908 1.00 0.00 O ATOM 192 N VAL 38 36.497 10.797 -22.133 1.00 0.00 N ATOM 193 CA VAL 38 35.602 11.053 -21.058 1.00 0.00 C ATOM 194 CB VAL 38 34.165 11.234 -21.470 1.00 0.00 C ATOM 195 CG1 VAL 38 34.086 12.469 -22.378 1.00 0.00 C ATOM 196 CG2 VAL 38 33.626 9.948 -22.110 1.00 0.00 C ATOM 197 C VAL 38 35.691 9.919 -20.093 1.00 0.00 C ATOM 198 O VAL 38 35.554 10.114 -18.888 1.00 0.00 O ATOM 199 N ALA 39 35.980 8.704 -20.609 1.00 0.00 N ATOM 200 CA ALA 39 35.839 7.519 -19.818 1.00 0.00 C ATOM 201 CB ALA 39 36.315 6.259 -20.561 1.00 0.00 C ATOM 202 C ALA 39 36.606 7.613 -18.544 1.00 0.00 C ATOM 203 O ALA 39 36.013 7.599 -17.470 1.00 0.00 O ATOM 204 N TYR 40 37.934 7.748 -18.560 1.00 0.00 N ATOM 205 CA TYR 40 38.458 7.952 -17.244 1.00 0.00 C ATOM 206 CB TYR 40 38.934 6.669 -16.542 1.00 0.00 C ATOM 207 CG TYR 40 37.731 5.870 -16.169 1.00 0.00 C ATOM 208 CD1 TYR 40 36.970 6.250 -15.087 1.00 0.00 C ATOM 209 CD2 TYR 40 37.372 4.744 -16.876 1.00 0.00 C ATOM 210 CE1 TYR 40 35.859 5.529 -14.716 1.00 0.00 C ATOM 211 CE2 TYR 40 36.261 4.019 -16.509 1.00 0.00 C ATOM 212 CZ TYR 40 35.503 4.412 -15.432 1.00 0.00 C ATOM 214 C TYR 40 39.628 8.823 -17.381 1.00 0.00 C ATOM 215 O TYR 40 40.715 8.332 -17.099 1.00 0.00 O ATOM 216 N PRO 41 39.424 10.082 -17.704 1.00 0.00 N ATOM 217 CA PRO 41 40.487 10.978 -18.090 1.00 0.00 C ATOM 218 CD PRO 41 38.213 10.789 -17.329 1.00 0.00 C ATOM 219 CB PRO 41 39.909 12.392 -17.978 1.00 0.00 C ATOM 220 CG PRO 41 38.383 12.184 -17.950 1.00 0.00 C ATOM 221 C PRO 41 41.726 10.817 -17.272 1.00 0.00 C ATOM 222 O PRO 41 42.559 9.981 -17.630 1.00 0.00 O ATOM 223 N SER 42 41.858 11.503 -16.130 1.00 0.00 N ATOM 224 CA SER 42 43.034 11.148 -15.407 1.00 0.00 C ATOM 225 CB SER 42 43.415 12.112 -14.273 1.00 0.00 C ATOM 226 OG SER 42 43.799 13.363 -14.822 1.00 0.00 O ATOM 227 C SER 42 42.659 9.842 -14.816 1.00 0.00 C ATOM 228 O SER 42 41.487 9.591 -14.546 1.00 0.00 O ATOM 229 N GLY 43 43.627 8.958 -14.582 1.00 0.00 N ATOM 230 CA GLY 43 43.176 7.679 -14.139 1.00 0.00 C ATOM 231 C GLY 43 42.589 7.072 -15.361 1.00 0.00 C ATOM 232 O GLY 43 41.569 6.390 -15.334 1.00 0.00 O ATOM 233 N VAL 44 43.287 7.320 -16.474 1.00 0.00 N ATOM 234 CA VAL 44 42.950 6.971 -17.813 1.00 0.00 C ATOM 235 CB VAL 44 44.163 7.062 -18.654 1.00 0.00 C ATOM 236 CG1 VAL 44 44.784 8.413 -18.284 1.00 0.00 C ATOM 237 CG2 VAL 44 45.074 5.855 -18.381 1.00 0.00 C ATOM 238 C VAL 44 42.449 5.574 -17.885 1.00 0.00 C ATOM 239 O VAL 44 42.681 4.793 -16.965 1.00 0.00 O ATOM 240 N ILE 45 41.688 5.268 -18.968 1.00 0.00 N ATOM 241 CA ILE 45 41.254 3.925 -19.219 1.00 0.00 C ATOM 242 CB ILE 45 40.651 3.721 -20.587 1.00 0.00 C ATOM 243 CG2 ILE 45 40.423 2.223 -20.853 1.00 0.00 C ATOM 244 CG1 ILE 45 39.378 4.568 -20.726 1.00 0.00 C ATOM 245 CD1 ILE 45 38.301 4.225 -19.702 1.00 0.00 C ATOM 246 C ILE 45 42.524 3.172 -19.145 1.00 0.00 C ATOM 247 O ILE 45 43.497 3.455 -19.842 1.00 0.00 O ATOM 248 N PRO 46 42.492 2.229 -18.265 1.00 0.00 N ATOM 249 CA PRO 46 43.688 1.588 -17.808 1.00 0.00 C ATOM 250 CD PRO 46 41.313 1.397 -18.093 1.00 0.00 C ATOM 251 CB PRO 46 43.212 0.321 -17.094 1.00 0.00 C ATOM 252 CG PRO 46 41.856 0.011 -17.741 1.00 0.00 C ATOM 253 C PRO 46 44.790 1.298 -18.782 1.00 0.00 C ATOM 254 O PRO 46 45.730 2.087 -18.850 1.00 0.00 O ATOM 255 N ASP 47 44.710 0.190 -19.535 1.00 0.00 N ATOM 256 CA ASP 47 45.799 -0.178 -20.393 1.00 0.00 C ATOM 257 CB ASP 47 45.656 -1.626 -20.908 1.00 0.00 C ATOM 258 CG ASP 47 46.888 -2.072 -21.707 1.00 0.00 C ATOM 259 OD1 ASP 47 47.759 -1.228 -22.044 1.00 0.00 O ATOM 260 OD2 ASP 47 46.963 -3.296 -22.000 1.00 0.00 O ATOM 261 C ASP 47 45.877 0.693 -21.595 1.00 0.00 C ATOM 262 O ASP 47 46.942 1.219 -21.912 1.00 0.00 O ATOM 263 N MET 48 44.729 0.880 -22.266 1.00 0.00 N ATOM 264 CA MET 48 44.702 1.460 -23.573 1.00 0.00 C ATOM 265 CB MET 48 43.297 1.450 -24.198 1.00 0.00 C ATOM 266 CG MET 48 42.842 0.041 -24.586 1.00 0.00 C ATOM 267 SD MET 48 41.187 -0.068 -25.332 1.00 0.00 S ATOM 268 CE MET 48 41.260 -1.860 -25.628 1.00 0.00 C ATOM 269 C MET 48 45.200 2.852 -23.555 1.00 0.00 C ATOM 270 O MET 48 45.957 3.256 -24.436 1.00 0.00 O ATOM 271 N ARG 49 44.792 3.614 -22.536 1.00 0.00 N ATOM 272 CA ARG 49 45.154 4.988 -22.436 1.00 0.00 C ATOM 273 CB ARG 49 44.124 5.815 -21.639 1.00 0.00 C ATOM 274 CG ARG 49 42.799 5.940 -22.409 1.00 0.00 C ATOM 275 CD ARG 49 41.580 6.315 -21.572 1.00 0.00 C ATOM 276 NE ARG 49 41.038 7.667 -21.878 1.00 0.00 N ATOM 277 CZ ARG 49 41.236 8.686 -20.993 1.00 0.00 C ATOM 280 C ARG 49 46.524 5.055 -21.856 1.00 0.00 C ATOM 281 O ARG 49 47.281 4.098 -21.955 1.00 0.00 O ATOM 1398 N PHE 209 54.814 18.217 -35.306 1.00 0.00 N ATOM 1399 CA PHE 209 53.522 17.657 -35.070 1.00 0.00 C ATOM 1400 CB PHE 209 52.540 18.661 -34.432 1.00 0.00 C ATOM 1401 CG PHE 209 52.480 19.874 -35.303 1.00 0.00 C ATOM 1402 CD1 PHE 209 51.593 19.962 -36.351 1.00 0.00 C ATOM 1403 CD2 PHE 209 53.329 20.930 -35.064 1.00 0.00 C ATOM 1404 CE1 PHE 209 51.557 21.086 -37.144 1.00 0.00 C ATOM 1405 CE2 PHE 209 53.297 22.055 -35.852 1.00 0.00 C ATOM 1406 CZ PHE 209 52.407 22.137 -36.894 1.00 0.00 C ATOM 1407 C PHE 209 52.997 17.232 -36.391 1.00 0.00 C ATOM 1408 O PHE 209 53.130 17.941 -37.386 1.00 0.00 O ATOM 1409 N ASN 210 52.370 16.059 -36.509 1.00 0.00 N ATOM 1410 CA ASN 210 52.135 15.713 -37.873 1.00 0.00 C ATOM 1411 CB ASN 210 52.373 14.222 -38.201 1.00 0.00 C ATOM 1412 CG ASN 210 52.465 13.940 -39.699 1.00 0.00 C ATOM 1413 OD1 ASN 210 53.459 14.252 -40.354 1.00 0.00 O ATOM 1414 ND2 ASN 210 51.405 13.300 -40.262 1.00 0.00 N ATOM 1415 C ASN 210 50.748 16.125 -38.229 1.00 0.00 C ATOM 1416 O ASN 210 49.784 15.810 -37.530 1.00 0.00 O ATOM 1417 N TYR 211 50.687 16.892 -39.334 1.00 0.00 N ATOM 1418 CA TYR 211 49.495 17.423 -39.909 1.00 0.00 C ATOM 1419 CB TYR 211 49.768 18.139 -41.239 1.00 0.00 C ATOM 1420 CG TYR 211 50.484 19.466 -41.162 1.00 0.00 C ATOM 1421 CD1 TYR 211 51.860 19.575 -41.172 1.00 0.00 C ATOM 1422 CD2 TYR 211 49.748 20.633 -41.139 1.00 0.00 C ATOM 1423 CE1 TYR 211 52.477 20.808 -41.123 1.00 0.00 C ATOM 1424 CE2 TYR 211 50.353 21.869 -41.092 1.00 0.00 C ATOM 1425 CZ TYR 211 51.724 21.958 -41.080 1.00 0.00 C ATOM 1427 C TYR 211 48.611 16.248 -40.146 1.00 0.00 C ATOM 1428 O TYR 211 49.040 15.214 -40.662 1.00 0.00 O ATOM 1429 N ILE 212 47.348 16.368 -39.726 1.00 0.00 N ATOM 1430 CA ILE 212 46.546 15.199 -39.783 1.00 0.00 C ATOM 1431 CB ILE 212 45.429 15.234 -38.780 1.00 0.00 C ATOM 1432 CG2 ILE 212 46.127 15.225 -37.405 1.00 0.00 C ATOM 1433 CG1 ILE 212 44.469 16.419 -38.949 1.00 0.00 C ATOM 1434 CD1 ILE 212 43.144 16.225 -38.214 1.00 0.00 C ATOM 1435 C ILE 212 46.120 14.978 -41.192 1.00 0.00 C ATOM 1436 O ILE 212 45.985 15.941 -41.939 1.00 0.00 O ATOM 1437 N VAL 213 45.972 13.688 -41.572 1.00 0.00 N ATOM 1438 CA VAL 213 45.662 13.155 -42.874 1.00 0.00 C ATOM 1439 CB VAL 213 44.218 13.373 -43.323 1.00 0.00 C ATOM 1440 CG1 VAL 213 43.994 12.750 -44.717 1.00 0.00 C ATOM 1441 CG2 VAL 213 43.295 12.750 -42.258 1.00 0.00 C ATOM 1442 C VAL 213 46.731 13.657 -43.813 1.00 0.00 C ATOM 1443 O VAL 213 47.783 13.028 -43.927 1.00 0.00 O ATOM 1444 N ARG 214 46.502 14.774 -44.531 1.00 0.00 N ATOM 1445 CA ARG 214 47.520 15.356 -45.358 1.00 0.00 C ATOM 1446 CB ARG 214 47.067 15.614 -46.819 1.00 0.00 C ATOM 1447 CG ARG 214 47.065 14.399 -47.769 1.00 0.00 C ATOM 1448 CD ARG 214 46.607 14.723 -49.199 1.00 0.00 C ATOM 1449 NE ARG 214 46.659 13.471 -50.010 1.00 0.00 N ATOM 1450 CZ ARG 214 47.708 13.238 -50.853 1.00 0.00 C ATOM 1453 C ARG 214 47.817 16.644 -44.648 1.00 0.00 C ATOM 1454 O ARG 214 48.714 16.694 -43.815 1.00 0.00 O ATOM 1455 N LEU 215 47.070 17.718 -44.946 1.00 0.00 N ATOM 1456 CA LEU 215 47.196 18.947 -44.218 1.00 0.00 C ATOM 1457 CB LEU 215 46.906 20.218 -45.040 1.00 0.00 C ATOM 1458 CG LEU 215 48.057 20.661 -46.001 1.00 0.00 C ATOM 1459 CD1 LEU 215 47.675 21.979 -46.728 1.00 0.00 C ATOM 1460 CD2 LEU 215 49.409 20.802 -45.249 1.00 0.00 C ATOM 1461 C LEU 215 46.213 18.834 -43.097 1.00 0.00 C ATOM 1462 O LEU 215 46.543 19.099 -41.941 1.00 0.00 O ATOM 1463 N ALA 216 44.965 18.451 -43.442 1.00 0.00 N ATOM 1464 CA ALA 216 43.961 18.197 -42.458 1.00 0.00 C ATOM 1465 CB ALA 216 42.835 19.218 -42.451 1.00 0.00 C ATOM 1466 C ALA 216 43.343 16.890 -42.908 1.00 0.00 C ATOM 1467 O ALA 216 42.615 16.286 -42.074 1.00 0.00 O ATOM 1468 OXT ALA 216 43.570 16.488 -44.082 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 345 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 75.58 56.0 75 67.0 112 ARMSMC SECONDARY STRUCTURE . . 72.37 66.7 18 52.9 34 ARMSMC SURFACE . . . . . . . . 77.88 50.8 59 70.2 84 ARMSMC BURIED . . . . . . . . 66.41 75.0 16 57.1 28 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 83.36 43.3 30 65.2 46 ARMSSC1 RELIABLE SIDE CHAINS . 80.32 44.4 27 64.3 42 ARMSSC1 SECONDARY STRUCTURE . . 106.68 0.0 6 42.9 14 ARMSSC1 SURFACE . . . . . . . . 82.04 44.0 25 69.4 36 ARMSSC1 BURIED . . . . . . . . 89.67 40.0 5 50.0 10 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 65.36 59.1 22 62.9 35 ARMSSC2 RELIABLE SIDE CHAINS . 62.14 60.0 20 64.5 31 ARMSSC2 SECONDARY STRUCTURE . . 64.14 60.0 5 41.7 12 ARMSSC2 SURFACE . . . . . . . . 61.26 58.8 17 65.4 26 ARMSSC2 BURIED . . . . . . . . 77.69 60.0 5 55.6 9 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 130.12 0.0 7 70.0 10 ARMSSC3 RELIABLE SIDE CHAINS . 123.69 0.0 6 66.7 9 ARMSSC3 SECONDARY STRUCTURE . . 106.74 0.0 1 33.3 3 ARMSSC3 SURFACE . . . . . . . . 133.51 0.0 6 66.7 9 ARMSSC3 BURIED . . . . . . . . 107.56 0.0 1 100.0 1 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 115.63 0.0 3 75.0 4 ARMSSC4 RELIABLE SIDE CHAINS . 115.63 0.0 3 75.0 4 ARMSSC4 SECONDARY STRUCTURE . . 157.00 0.0 1 50.0 2 ARMSSC4 SURFACE . . . . . . . . 115.63 0.0 3 75.0 4 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 9.92 (Number of atoms: 46) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 9.92 46 80.7 57 CRMSCA CRN = ALL/NP . . . . . 0.2156 CRMSCA SECONDARY STRUCTURE . . 8.99 14 82.4 17 CRMSCA SURFACE . . . . . . . . 9.94 35 81.4 43 CRMSCA BURIED . . . . . . . . 9.83 11 78.6 14 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 9.96 227 80.8 281 CRMSMC SECONDARY STRUCTURE . . 9.34 70 82.4 85 CRMSMC SURFACE . . . . . . . . 9.95 173 81.2 213 CRMSMC BURIED . . . . . . . . 10.00 54 79.4 68 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 11.60 161 77.4 208 CRMSSC RELIABLE SIDE CHAINS . 11.62 143 75.3 190 CRMSSC SECONDARY STRUCTURE . . 11.41 52 72.2 72 CRMSSC SURFACE . . . . . . . . 11.50 122 76.2 160 CRMSSC BURIED . . . . . . . . 11.88 39 81.2 48 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 10.68 345 79.1 436 CRMSALL SECONDARY STRUCTURE . . 10.33 108 77.1 140 CRMSALL SURFACE . . . . . . . . 10.60 262 78.9 332 CRMSALL BURIED . . . . . . . . 10.90 83 79.8 104 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 9.481 1.000 0.500 46 80.7 57 ERRCA SECONDARY STRUCTURE . . 8.593 1.000 0.500 14 82.4 17 ERRCA SURFACE . . . . . . . . 9.479 1.000 0.500 35 81.4 43 ERRCA BURIED . . . . . . . . 9.485 1.000 0.500 11 78.6 14 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 9.523 1.000 0.500 227 80.8 281 ERRMC SECONDARY STRUCTURE . . 8.922 1.000 0.500 70 82.4 85 ERRMC SURFACE . . . . . . . . 9.483 1.000 0.500 173 81.2 213 ERRMC BURIED . . . . . . . . 9.653 1.000 0.500 54 79.4 68 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 10.990 1.000 0.500 161 77.4 208 ERRSC RELIABLE SIDE CHAINS . 11.027 1.000 0.500 143 75.3 190 ERRSC SECONDARY STRUCTURE . . 10.759 1.000 0.500 52 72.2 72 ERRSC SURFACE . . . . . . . . 10.850 1.000 0.500 122 76.2 160 ERRSC BURIED . . . . . . . . 11.427 1.000 0.500 39 81.2 48 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 10.138 1.000 0.500 345 79.1 436 ERRALL SECONDARY STRUCTURE . . 9.759 1.000 0.500 108 77.1 140 ERRALL SURFACE . . . . . . . . 10.031 1.000 0.500 262 78.9 332 ERRALL BURIED . . . . . . . . 10.474 1.000 0.500 83 79.8 104 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 3 27 46 57 DISTCA CA (P) 0.00 0.00 0.00 5.26 47.37 57 DISTCA CA (RMS) 0.00 0.00 0.00 4.29 7.68 DISTCA ALL (N) 0 0 1 16 179 345 436 DISTALL ALL (P) 0.00 0.00 0.23 3.67 41.06 436 DISTALL ALL (RMS) 0.00 0.00 2.44 4.23 7.63 DISTALL END of the results output