####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 46 ( 341), selected 46 , name T0629TS026_1-D1 # Molecule2: number of CA atoms 57 ( 436), selected 46 , name T0629-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0629TS026_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 46 4 - 49 4.47 4.47 LCS_AVERAGE: 80.70 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 4 - 44 2.00 4.78 LCS_AVERAGE: 65.26 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 5 - 25 0.97 4.87 LCS_AVERAGE: 31.24 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 46 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT P 4 P 4 20 41 46 5 14 27 34 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT I 5 I 5 21 41 46 7 16 27 34 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT G 6 G 6 21 41 46 5 16 27 34 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT A 7 A 7 21 41 46 5 15 27 34 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT P 8 P 8 21 41 46 5 16 27 34 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT I 9 I 9 21 41 46 5 16 27 34 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT P 10 P 10 21 41 46 9 16 27 34 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT W 11 W 11 21 41 46 9 16 27 34 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT P 12 P 12 21 41 46 9 16 27 34 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT S 13 S 13 21 41 46 9 16 27 34 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT D 14 D 14 21 41 46 9 16 27 34 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT S 15 S 15 21 41 46 5 15 25 34 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT V 16 V 16 21 41 46 3 13 27 34 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT P 17 P 17 21 41 46 3 4 17 34 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT A 18 A 18 21 41 46 5 15 26 34 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT G 19 G 19 21 41 46 5 15 26 34 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT F 20 F 20 21 41 46 9 16 27 34 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT A 21 A 21 21 41 46 9 16 27 34 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT L 22 L 22 21 41 46 9 16 27 34 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT M 23 M 23 21 41 46 9 16 27 34 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT E 24 E 24 21 41 46 5 16 27 34 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT G 25 G 25 21 41 46 5 16 27 34 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT Q 26 Q 26 20 41 46 7 16 27 34 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT T 27 T 27 20 41 46 11 16 27 34 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT F 28 F 28 20 41 46 11 16 27 34 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT D 29 D 29 20 41 46 11 16 25 34 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT K 30 K 30 20 41 46 11 16 27 34 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT S 31 S 31 20 41 46 11 15 22 30 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT A 32 A 32 20 41 46 5 13 22 30 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT Y 33 Y 33 20 41 46 11 16 27 34 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT P 34 P 34 20 41 46 11 16 27 34 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT K 35 K 35 20 41 46 11 16 27 34 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT L 36 L 36 20 41 46 11 15 27 34 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT A 37 A 37 20 41 46 11 16 27 34 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT V 38 V 38 20 41 46 11 15 23 34 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT A 39 A 39 19 41 46 4 12 17 29 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT Y 40 Y 40 16 41 46 4 13 25 34 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT P 41 P 41 16 41 46 5 16 27 34 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT S 42 S 42 14 41 46 4 16 27 34 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT G 43 G 43 4 41 46 4 4 5 5 5 17 21 31 35 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT V 44 V 44 4 41 46 4 4 5 18 24 32 36 40 40 40 41 41 42 43 44 44 44 44 44 45 LCS_GDT I 45 I 45 5 6 46 4 4 5 6 6 6 7 16 20 23 34 37 42 43 44 44 44 44 44 45 LCS_GDT P 46 P 46 5 6 46 3 4 5 6 6 6 7 10 11 16 28 36 42 43 44 44 44 44 44 45 LCS_GDT D 47 D 47 5 6 46 3 4 5 6 6 6 14 17 21 26 34 37 39 43 44 44 44 44 44 45 LCS_GDT M 48 M 48 5 6 46 3 4 5 6 6 6 7 9 13 14 21 23 25 28 35 36 37 38 41 45 LCS_GDT R 49 R 49 5 6 46 0 3 5 6 6 6 7 8 9 10 14 17 23 25 27 30 33 36 37 37 LCS_AVERAGE LCS_A: 59.06 ( 31.24 65.26 80.70 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 11 16 27 34 38 39 39 40 40 40 41 41 42 43 44 44 44 44 44 45 GDT PERCENT_AT 19.30 28.07 47.37 59.65 66.67 68.42 68.42 70.18 70.18 70.18 71.93 71.93 73.68 75.44 77.19 77.19 77.19 77.19 77.19 78.95 GDT RMS_LOCAL 0.33 0.77 1.07 1.27 1.43 1.48 1.48 1.66 1.66 1.66 2.00 2.00 2.32 2.61 2.96 2.96 2.96 2.96 2.96 3.63 GDT RMS_ALL_AT 5.61 4.83 4.80 4.82 4.79 4.80 4.80 4.78 4.78 4.78 4.78 4.78 4.73 4.69 4.62 4.62 4.62 4.62 4.62 4.52 # Checking swapping # possible swapping detected: D 14 D 14 # possible swapping detected: F 20 F 20 # possible swapping detected: E 24 E 24 # possible swapping detected: F 28 F 28 # possible swapping detected: D 29 D 29 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA P 4 P 4 1.062 0 0.117 0.262 2.741 77.381 72.177 LGA I 5 I 5 0.968 0 0.064 1.419 6.022 85.952 65.893 LGA G 6 G 6 1.284 0 0.097 0.097 1.658 79.286 79.286 LGA A 7 A 7 0.791 0 0.045 0.080 1.281 95.238 92.476 LGA P 8 P 8 0.607 0 0.062 0.108 0.702 90.476 90.476 LGA I 9 I 9 1.120 0 0.162 0.216 2.648 88.214 78.571 LGA P 10 P 10 0.932 0 0.202 0.262 1.537 85.952 81.565 LGA W 11 W 11 0.956 0 0.050 0.359 2.924 90.476 78.844 LGA P 12 P 12 1.184 0 0.132 0.246 1.715 81.548 84.082 LGA S 13 S 13 1.432 0 0.054 0.728 1.658 81.429 80.000 LGA D 14 D 14 1.398 0 0.147 0.286 2.413 75.000 72.917 LGA S 15 S 15 2.229 0 0.226 0.654 3.266 75.119 67.937 LGA V 16 V 16 1.562 0 0.136 0.211 2.813 77.143 70.748 LGA P 17 P 17 2.022 0 0.601 0.596 3.467 65.119 62.789 LGA A 18 A 18 1.744 0 0.120 0.153 2.367 75.000 72.952 LGA G 19 G 19 1.910 0 0.063 0.063 1.910 72.857 72.857 LGA F 20 F 20 1.378 0 0.039 0.155 1.571 81.429 79.091 LGA A 21 A 21 1.346 0 0.054 0.060 1.552 81.429 79.714 LGA L 22 L 22 0.929 0 0.049 0.280 1.499 88.214 87.083 LGA M 23 M 23 0.974 0 0.129 0.925 3.106 90.476 76.905 LGA E 24 E 24 0.922 0 0.223 1.014 1.686 90.476 86.614 LGA G 25 G 25 0.849 0 0.059 0.059 1.040 88.214 88.214 LGA Q 26 Q 26 0.967 0 0.196 1.322 7.060 88.214 62.540 LGA T 27 T 27 1.575 0 0.054 0.097 1.641 75.000 76.531 LGA F 28 F 28 1.694 0 0.051 1.217 7.843 72.857 47.879 LGA D 29 D 29 1.901 0 0.127 1.060 5.023 72.857 58.869 LGA K 30 K 30 1.728 0 0.065 1.455 9.157 68.810 47.778 LGA S 31 S 31 2.843 0 0.063 0.089 3.820 57.143 52.540 LGA A 32 A 32 2.615 0 0.146 0.143 2.987 65.000 63.429 LGA Y 33 Y 33 1.094 0 0.160 1.354 10.740 83.810 45.079 LGA P 34 P 34 0.619 0 0.050 0.098 0.710 92.857 91.837 LGA K 35 K 35 0.723 0 0.066 0.788 5.898 88.333 66.296 LGA L 36 L 36 0.902 0 0.083 0.099 1.535 88.214 84.881 LGA A 37 A 37 1.015 0 0.145 0.150 1.230 83.690 83.238 LGA V 38 V 38 2.155 0 0.035 1.204 5.250 66.786 62.993 LGA A 39 A 39 2.490 0 0.087 0.089 2.956 62.857 61.714 LGA Y 40 Y 40 1.904 0 0.095 1.338 8.036 72.976 44.643 LGA P 41 P 41 1.096 0 0.167 0.399 2.790 77.619 76.803 LGA S 42 S 42 1.164 0 0.686 0.870 5.565 59.167 58.810 LGA G 43 G 43 7.536 0 0.157 0.157 9.305 11.190 11.190 LGA V 44 V 44 4.798 0 0.066 0.153 5.501 30.119 34.558 LGA I 45 I 45 8.528 0 0.208 0.800 12.936 6.190 3.095 LGA P 46 P 46 8.076 0 0.094 0.223 11.059 2.262 1.429 LGA D 47 D 47 10.161 0 0.154 0.373 13.165 0.714 0.417 LGA M 48 M 48 15.493 0 0.693 1.102 17.327 0.000 0.000 LGA R 49 R 49 20.050 0 0.055 0.966 25.090 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 46 184 184 100.00 341 341 100.00 57 SUMMARY(RMSD_GDC): 4.473 4.485 5.582 55.142 50.136 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 46 57 4.0 40 1.66 58.772 63.582 2.273 LGA_LOCAL RMSD: 1.660 Number of atoms: 40 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 4.778 Number of assigned atoms: 46 Std_ASGN_ATOMS RMSD: 4.473 Standard rmsd on all 46 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.919490 * X + -0.336584 * Y + -0.203099 * Z + 50.011040 Y_new = -0.335686 * X + -0.941127 * Y + 0.039926 * Z + 18.999147 Z_new = -0.204580 * X + 0.031466 * Y + -0.978344 * Z + 29.262512 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.350044 0.206035 3.109442 [DEG: -20.0560 11.8049 178.1579 ] ZXZ: -1.764907 2.933100 -1.418187 [DEG: -101.1217 168.0542 -81.2561 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0629TS026_1-D1 REMARK 2: T0629-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0629TS026_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 46 57 4.0 40 1.66 63.582 4.47 REMARK ---------------------------------------------------------- MOLECULE T0629TS026_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0629 REMARK MODEL 1 REMARK PARENT 1OCY_A ATOM 1 N PRO 4 27.156 2.148 -21.933 1.00125.13 N ATOM 2 CA PRO 4 27.824 3.441 -21.628 1.00125.13 C ATOM 3 CD PRO 4 25.925 2.007 -21.078 1.00125.13 C ATOM 4 CB PRO 4 27.104 4.017 -20.411 1.00125.13 C ATOM 5 CG PRO 4 25.710 3.384 -20.441 1.00125.13 C ATOM 6 C PRO 4 29.266 3.147 -21.375 1.00125.13 C ATOM 7 O PRO 4 29.594 2.038 -20.957 1.00125.13 O ATOM 8 N ILE 5 30.142 4.136 -21.620 1.00137.84 N ATOM 9 CA ILE 5 31.547 3.952 -21.427 1.00137.84 C ATOM 10 CB ILE 5 32.361 4.640 -22.491 1.00137.84 C ATOM 11 CG2 ILE 5 32.112 6.146 -22.344 1.00137.84 C ATOM 12 CG1 ILE 5 33.848 4.243 -22.458 1.00137.84 C ATOM 13 CD1 ILE 5 34.612 4.709 -21.218 1.00137.84 C ATOM 14 C ILE 5 31.891 4.546 -20.100 1.00137.84 C ATOM 15 O ILE 5 31.417 5.624 -19.742 1.00137.84 O ATOM 16 N GLY 6 32.715 3.827 -19.316 1.00 35.13 N ATOM 17 CA GLY 6 33.125 4.346 -18.047 1.00 35.13 C ATOM 18 C GLY 6 32.385 3.652 -16.944 1.00 35.13 C ATOM 19 O GLY 6 32.721 3.829 -15.774 1.00 35.13 O ATOM 20 N ALA 7 31.349 2.855 -17.273 1.00 47.28 N ATOM 21 CA ALA 7 30.645 2.168 -16.222 1.00 47.28 C ATOM 22 CB ALA 7 29.239 1.693 -16.637 1.00 47.28 C ATOM 23 C ALA 7 31.432 0.957 -15.809 1.00 47.28 C ATOM 24 O ALA 7 31.945 0.214 -16.644 1.00 47.28 O ATOM 25 N PRO 8 31.569 0.777 -14.516 1.00103.20 N ATOM 26 CA PRO 8 32.240 -0.396 -14.007 1.00103.20 C ATOM 27 CD PRO 8 31.806 1.933 -13.669 1.00103.20 C ATOM 28 CB PRO 8 32.977 0.039 -12.737 1.00103.20 C ATOM 29 CG PRO 8 32.290 1.351 -12.333 1.00103.20 C ATOM 30 C PRO 8 31.286 -1.525 -13.756 1.00103.20 C ATOM 31 O PRO 8 30.105 -1.273 -13.513 1.00103.20 O ATOM 32 N ILE 9 31.780 -2.779 -13.808 1.00 61.70 N ATOM 33 CA ILE 9 30.962 -3.917 -13.513 1.00 61.70 C ATOM 34 CB ILE 9 30.222 -4.425 -14.716 1.00 61.70 C ATOM 35 CG2 ILE 9 29.521 -5.738 -14.337 1.00 61.70 C ATOM 36 CG1 ILE 9 29.266 -3.330 -15.226 1.00 61.70 C ATOM 37 CD1 ILE 9 28.659 -3.603 -16.604 1.00 61.70 C ATOM 38 C ILE 9 31.878 -4.995 -13.018 1.00 61.70 C ATOM 39 O ILE 9 33.070 -4.987 -13.320 1.00 61.70 O ATOM 40 N PRO 10 31.368 -5.892 -12.216 1.00 92.38 N ATOM 41 CA PRO 10 32.164 -7.009 -11.777 1.00 92.38 C ATOM 42 CD PRO 10 30.393 -5.500 -11.213 1.00 92.38 C ATOM 43 CB PRO 10 31.562 -7.470 -10.445 1.00 92.38 C ATOM 44 CG PRO 10 30.198 -6.764 -10.365 1.00 92.38 C ATOM 45 C PRO 10 32.162 -8.055 -12.846 1.00 92.38 C ATOM 46 O PRO 10 31.251 -8.047 -13.672 1.00 92.38 O ATOM 47 N TRP 11 33.173 -8.948 -12.877 1.00 79.30 N ATOM 48 CA TRP 11 33.173 -9.970 -13.885 1.00 79.30 C ATOM 49 CB TRP 11 34.180 -9.694 -15.019 1.00 79.30 C ATOM 50 CG TRP 11 34.126 -10.661 -16.179 1.00 79.30 C ATOM 51 CD2 TRP 11 33.278 -10.494 -17.323 1.00 79.30 C ATOM 52 CD1 TRP 11 34.825 -11.813 -16.388 1.00 79.30 C ATOM 53 NE1 TRP 11 34.462 -12.377 -17.587 1.00 79.30 N ATOM 54 CE2 TRP 11 33.511 -11.576 -18.174 1.00 79.30 C ATOM 55 CE3 TRP 11 32.376 -9.522 -17.638 1.00 79.30 C ATOM 56 CZ2 TRP 11 32.842 -11.700 -19.358 1.00 79.30 C ATOM 57 CZ3 TRP 11 31.708 -9.650 -18.835 1.00 79.30 C ATOM 58 CH2 TRP 11 31.934 -10.717 -19.679 1.00 79.30 C ATOM 59 C TRP 11 33.537 -11.262 -13.216 1.00 79.30 C ATOM 60 O TRP 11 34.517 -11.350 -12.477 1.00 79.30 O ATOM 61 N PRO 12 32.718 -12.256 -13.441 1.00 96.92 N ATOM 62 CA PRO 12 32.925 -13.563 -12.866 1.00 96.92 C ATOM 63 CD PRO 12 31.306 -11.996 -13.678 1.00 96.92 C ATOM 64 CB PRO 12 31.561 -14.265 -12.888 1.00 96.92 C ATOM 65 CG PRO 12 30.680 -13.392 -13.798 1.00 96.92 C ATOM 66 C PRO 12 34.017 -14.391 -13.475 1.00 96.92 C ATOM 67 O PRO 12 34.403 -15.381 -12.854 1.00 96.92 O ATOM 68 N SER 13 34.534 -14.047 -14.671 1.00 97.70 N ATOM 69 CA SER 13 35.482 -14.944 -15.273 1.00 97.70 C ATOM 70 CB SER 13 35.078 -15.401 -16.684 1.00 97.70 C ATOM 71 OG SER 13 33.875 -16.155 -16.636 1.00 97.70 O ATOM 72 C SER 13 36.818 -14.285 -15.402 1.00 97.70 C ATOM 73 O SER 13 36.965 -13.075 -15.241 1.00 97.70 O ATOM 74 N ASP 14 37.856 -15.111 -15.635 1.00 47.67 N ATOM 75 CA ASP 14 39.197 -14.633 -15.801 1.00 47.67 C ATOM 76 CB ASP 14 40.255 -15.748 -15.750 1.00 47.67 C ATOM 77 CG ASP 14 40.364 -16.207 -14.301 1.00 47.67 C ATOM 78 OD1 ASP 14 39.615 -15.669 -13.442 1.00 47.67 O ATOM 79 OD2 ASP 14 41.206 -17.104 -14.034 1.00 47.67 O ATOM 80 C ASP 14 39.343 -13.913 -17.106 1.00 47.67 C ATOM 81 O ASP 14 40.086 -12.936 -17.194 1.00 47.67 O ATOM 82 N SER 15 38.645 -14.372 -18.165 1.00 36.27 N ATOM 83 CA SER 15 38.831 -13.761 -19.450 1.00 36.27 C ATOM 84 CB SER 15 39.209 -14.778 -20.540 1.00 36.27 C ATOM 85 OG SER 15 38.176 -15.739 -20.692 1.00 36.27 O ATOM 86 C SER 15 37.562 -13.094 -19.879 1.00 36.27 C ATOM 87 O SER 15 36.469 -13.490 -19.481 1.00 36.27 O ATOM 88 N VAL 16 37.697 -12.036 -20.706 1.00 43.14 N ATOM 89 CA VAL 16 36.556 -11.312 -21.187 1.00 43.14 C ATOM 90 CB VAL 16 36.622 -9.840 -20.880 1.00 43.14 C ATOM 91 CG1 VAL 16 35.378 -9.149 -21.463 1.00 43.14 C ATOM 92 CG2 VAL 16 36.783 -9.649 -19.360 1.00 43.14 C ATOM 93 C VAL 16 36.553 -11.456 -22.676 1.00 43.14 C ATOM 94 O VAL 16 37.609 -11.472 -23.308 1.00 43.14 O ATOM 95 N PRO 17 35.396 -11.608 -23.262 1.00 71.15 N ATOM 96 CA PRO 17 35.260 -11.739 -24.684 1.00 71.15 C ATOM 97 CD PRO 17 34.125 -11.685 -22.558 1.00 71.15 C ATOM 98 CB PRO 17 33.770 -11.981 -24.939 1.00 71.15 C ATOM 99 CG PRO 17 33.075 -11.464 -23.662 1.00 71.15 C ATOM 100 C PRO 17 35.818 -10.556 -25.413 1.00 71.15 C ATOM 101 O PRO 17 36.488 -10.766 -26.424 1.00 71.15 O ATOM 102 N ALA 18 35.553 -9.317 -24.938 1.00 76.26 N ATOM 103 CA ALA 18 36.106 -8.157 -25.585 1.00 76.26 C ATOM 104 CB ALA 18 35.968 -8.169 -27.118 1.00 76.26 C ATOM 105 C ALA 18 35.380 -6.928 -25.119 1.00 76.26 C ATOM 106 O ALA 18 34.323 -7.007 -24.495 1.00 76.26 O ATOM 107 N GLY 19 35.974 -5.747 -25.401 1.00201.80 N ATOM 108 CA GLY 19 35.344 -4.479 -25.159 1.00201.80 C ATOM 109 C GLY 19 35.558 -4.050 -23.746 1.00201.80 C ATOM 110 O GLY 19 35.218 -2.924 -23.384 1.00201.80 O ATOM 111 N PHE 20 36.143 -4.917 -22.904 1.00129.55 N ATOM 112 CA PHE 20 36.278 -4.513 -21.539 1.00129.55 C ATOM 113 CB PHE 20 35.506 -5.396 -20.545 1.00129.55 C ATOM 114 CG PHE 20 34.054 -5.268 -20.847 1.00129.55 C ATOM 115 CD1 PHE 20 33.306 -4.284 -20.244 1.00129.55 C ATOM 116 CD2 PHE 20 33.441 -6.121 -21.736 1.00129.55 C ATOM 117 CE1 PHE 20 31.964 -4.158 -20.519 1.00129.55 C ATOM 118 CE2 PHE 20 32.101 -6.001 -22.013 1.00129.55 C ATOM 119 CZ PHE 20 31.359 -5.019 -21.405 1.00129.55 C ATOM 120 C PHE 20 37.706 -4.631 -21.149 1.00129.55 C ATOM 121 O PHE 20 38.478 -5.368 -21.759 1.00129.55 O ATOM 122 N ALA 21 38.086 -3.862 -20.111 1.00 39.05 N ATOM 123 CA ALA 21 39.411 -3.924 -19.583 1.00 39.05 C ATOM 124 CB ALA 21 40.222 -2.637 -19.804 1.00 39.05 C ATOM 125 C ALA 21 39.252 -4.089 -18.108 1.00 39.05 C ATOM 126 O ALA 21 38.327 -3.544 -17.510 1.00 39.05 O ATOM 127 N LEU 22 40.141 -4.872 -17.476 1.00 53.21 N ATOM 128 CA LEU 22 40.025 -5.030 -16.059 1.00 53.21 C ATOM 129 CB LEU 22 40.814 -6.220 -15.483 1.00 53.21 C ATOM 130 CG LEU 22 40.294 -7.598 -15.924 1.00 53.21 C ATOM 131 CD1 LEU 22 41.129 -8.724 -15.295 1.00 53.21 C ATOM 132 CD2 LEU 22 38.793 -7.752 -15.637 1.00 53.21 C ATOM 133 C LEU 22 40.581 -3.793 -15.441 1.00 53.21 C ATOM 134 O LEU 22 41.437 -3.131 -16.029 1.00 53.21 O ATOM 135 N MET 23 40.091 -3.420 -14.243 1.00118.07 N ATOM 136 CA MET 23 40.692 -2.272 -13.642 1.00118.07 C ATOM 137 CB MET 23 39.828 -1.570 -12.579 1.00118.07 C ATOM 138 CG MET 23 38.685 -0.736 -13.162 1.00118.07 C ATOM 139 SD MET 23 37.670 0.140 -11.932 1.00118.07 S ATOM 140 CE MET 23 36.556 -1.253 -11.590 1.00118.07 C ATOM 141 C MET 23 41.949 -2.741 -12.990 1.00118.07 C ATOM 142 O MET 23 42.041 -2.843 -11.767 1.00118.07 O ATOM 143 N GLU 24 42.929 -3.076 -13.851 1.00105.83 N ATOM 144 CA GLU 24 44.260 -3.515 -13.549 1.00105.83 C ATOM 145 CB GLU 24 44.957 -4.155 -14.763 1.00105.83 C ATOM 146 CG GLU 24 44.243 -5.398 -15.304 1.00105.83 C ATOM 147 CD GLU 24 44.367 -6.526 -14.291 1.00105.83 C ATOM 148 OE1 GLU 24 44.539 -6.217 -13.082 1.00105.83 O ATOM 149 OE2 GLU 24 44.285 -7.712 -14.709 1.00105.83 O ATOM 150 C GLU 24 45.087 -2.334 -13.129 1.00105.83 C ATOM 151 O GLU 24 46.038 -2.476 -12.361 1.00105.83 O ATOM 152 N GLY 25 44.753 -1.129 -13.639 1.00 47.12 N ATOM 153 CA GLY 25 45.561 0.027 -13.377 1.00 47.12 C ATOM 154 C GLY 25 46.457 0.250 -14.558 1.00 47.12 C ATOM 155 O GLY 25 47.423 1.007 -14.485 1.00 47.12 O ATOM 156 N GLN 26 46.152 -0.416 -15.687 1.00130.61 N ATOM 157 CA GLN 26 46.937 -0.287 -16.884 1.00130.61 C ATOM 158 CB GLN 26 46.840 -1.512 -17.810 1.00130.61 C ATOM 159 CG GLN 26 47.969 -1.592 -18.840 1.00130.61 C ATOM 160 CD GLN 26 49.206 -2.087 -18.106 1.00130.61 C ATOM 161 OE1 GLN 26 49.251 -2.120 -16.877 1.00130.61 O ATOM 162 NE2 GLN 26 50.246 -2.484 -18.885 1.00130.61 N ATOM 163 C GLN 26 46.418 0.910 -17.624 1.00130.61 C ATOM 164 O GLN 26 45.763 1.768 -17.036 1.00130.61 O ATOM 165 N THR 27 46.752 1.035 -18.930 1.00 50.73 N ATOM 166 CA THR 27 46.262 2.145 -19.703 1.00 50.73 C ATOM 167 CB THR 27 47.328 3.105 -20.129 1.00 50.73 C ATOM 168 OG1 THR 27 48.287 2.431 -20.928 1.00 50.73 O ATOM 169 CG2 THR 27 47.996 3.710 -18.883 1.00 50.73 C ATOM 170 C THR 27 45.630 1.620 -20.958 1.00 50.73 C ATOM 171 O THR 27 45.792 0.455 -21.316 1.00 50.73 O ATOM 172 N PHE 28 44.870 2.493 -21.653 1.00151.12 N ATOM 173 CA PHE 28 44.191 2.115 -22.859 1.00151.12 C ATOM 174 CB PHE 28 42.661 2.150 -22.702 1.00151.12 C ATOM 175 CG PHE 28 42.078 1.194 -23.679 1.00151.12 C ATOM 176 CD1 PHE 28 41.959 -0.126 -23.314 1.00151.12 C ATOM 177 CD2 PHE 28 41.654 1.592 -24.923 1.00151.12 C ATOM 178 CE1 PHE 28 41.425 -1.050 -24.177 1.00151.12 C ATOM 179 CE2 PHE 28 41.118 0.670 -25.790 1.00151.12 C ATOM 180 CZ PHE 28 41.001 -0.650 -25.420 1.00151.12 C ATOM 181 C PHE 28 44.561 3.150 -23.874 1.00151.12 C ATOM 182 O PHE 28 45.016 4.238 -23.518 1.00151.12 O ATOM 183 N ASP 29 44.406 2.826 -25.175 1.00 42.98 N ATOM 184 CA ASP 29 44.728 3.767 -26.211 1.00 42.98 C ATOM 185 CB ASP 29 45.081 3.119 -27.562 1.00 42.98 C ATOM 186 CG ASP 29 46.465 2.503 -27.445 1.00 42.98 C ATOM 187 OD1 ASP 29 47.126 2.730 -26.397 1.00 42.98 O ATOM 188 OD2 ASP 29 46.878 1.796 -28.403 1.00 42.98 O ATOM 189 C ASP 29 43.538 4.639 -26.445 1.00 42.98 C ATOM 190 O ASP 29 42.405 4.166 -26.511 1.00 42.98 O ATOM 191 N LYS 30 43.784 5.955 -26.569 1.00117.10 N ATOM 192 CA LYS 30 42.743 6.911 -26.805 1.00117.10 C ATOM 193 CB LYS 30 43.278 8.355 -26.821 1.00117.10 C ATOM 194 CG LYS 30 42.200 9.440 -26.890 1.00117.10 C ATOM 195 CD LYS 30 41.388 9.456 -28.188 1.00117.10 C ATOM 196 CE LYS 30 40.276 10.506 -28.183 1.00117.10 C ATOM 197 NZ LYS 30 39.506 10.435 -29.445 1.00117.10 N ATOM 198 C LYS 30 42.148 6.610 -28.144 1.00117.10 C ATOM 199 O LYS 30 40.934 6.682 -28.327 1.00117.10 O ATOM 200 N SER 31 43.003 6.260 -29.122 1.00 67.82 N ATOM 201 CA SER 31 42.521 5.976 -30.440 1.00 67.82 C ATOM 202 CB SER 31 43.653 5.617 -31.418 1.00 67.82 C ATOM 203 OG SER 31 44.562 6.701 -31.524 1.00 67.82 O ATOM 204 C SER 31 41.627 4.787 -30.337 1.00 67.82 C ATOM 205 O SER 31 40.550 4.748 -30.931 1.00 67.82 O ATOM 206 N ALA 32 42.054 3.782 -29.549 1.00 47.19 N ATOM 207 CA ALA 32 41.275 2.588 -29.433 1.00 47.19 C ATOM 208 CB ALA 32 41.917 1.547 -28.499 1.00 47.19 C ATOM 209 C ALA 32 39.940 2.945 -28.861 1.00 47.19 C ATOM 210 O ALA 32 38.912 2.549 -29.410 1.00 47.19 O ATOM 211 N TYR 33 39.884 3.696 -27.737 1.00144.17 N ATOM 212 CA TYR 33 38.539 4.048 -27.399 1.00144.17 C ATOM 213 CB TYR 33 37.862 3.212 -26.312 1.00144.17 C ATOM 214 CG TYR 33 36.427 3.358 -26.692 1.00144.17 C ATOM 215 CD1 TYR 33 35.906 2.528 -27.658 1.00144.17 C ATOM 216 CD2 TYR 33 35.606 4.300 -26.118 1.00144.17 C ATOM 217 CE1 TYR 33 34.595 2.628 -28.052 1.00144.17 C ATOM 218 CE2 TYR 33 34.291 4.400 -26.513 1.00144.17 C ATOM 219 CZ TYR 33 33.779 3.565 -27.474 1.00144.17 C ATOM 220 OH TYR 33 32.430 3.677 -27.871 1.00144.17 O ATOM 221 C TYR 33 38.453 5.495 -27.023 1.00144.17 C ATOM 222 O TYR 33 38.810 5.928 -25.927 1.00144.17 O ATOM 223 N PRO 34 37.930 6.239 -27.953 1.00 79.57 N ATOM 224 CA PRO 34 37.784 7.658 -27.813 1.00 79.57 C ATOM 225 CD PRO 34 37.851 5.805 -29.337 1.00 79.57 C ATOM 226 CB PRO 34 37.443 8.187 -29.212 1.00 79.57 C ATOM 227 CG PRO 34 37.069 6.934 -30.026 1.00 79.57 C ATOM 228 C PRO 34 36.820 8.088 -26.752 1.00 79.57 C ATOM 229 O PRO 34 37.043 9.139 -26.153 1.00 79.57 O ATOM 230 N LYS 35 35.728 7.332 -26.513 1.00 78.09 N ATOM 231 CA LYS 35 34.782 7.772 -25.523 1.00 78.09 C ATOM 232 CB LYS 35 33.431 7.033 -25.536 1.00 78.09 C ATOM 233 CG LYS 35 32.335 7.787 -24.776 1.00 78.09 C ATOM 234 CD LYS 35 30.919 7.270 -25.045 1.00 78.09 C ATOM 235 CE LYS 35 29.840 8.021 -24.259 1.00 78.09 C ATOM 236 NZ LYS 35 28.496 7.482 -24.577 1.00 78.09 N ATOM 237 C LYS 35 35.397 7.644 -24.167 1.00 78.09 C ATOM 238 O LYS 35 35.150 8.453 -23.275 1.00 78.09 O ATOM 239 N LEU 36 36.218 6.598 -23.975 1.00 98.37 N ATOM 240 CA LEU 36 36.885 6.391 -22.724 1.00 98.37 C ATOM 241 CB LEU 36 37.785 5.142 -22.794 1.00 98.37 C ATOM 242 CG LEU 36 38.605 4.851 -21.524 1.00 98.37 C ATOM 243 CD1 LEU 36 37.714 4.416 -20.349 1.00 98.37 C ATOM 244 CD2 LEU 36 39.754 3.874 -21.823 1.00 98.37 C ATOM 245 C LEU 36 37.771 7.576 -22.486 1.00 98.37 C ATOM 246 O LEU 36 37.801 8.154 -21.398 1.00 98.37 O ATOM 247 N ALA 37 38.505 7.988 -23.534 1.00 44.16 N ATOM 248 CA ALA 37 39.408 9.079 -23.349 1.00 44.16 C ATOM 249 CB ALA 37 40.200 9.420 -24.624 1.00 44.16 C ATOM 250 C ALA 37 38.620 10.290 -22.971 1.00 44.16 C ATOM 251 O ALA 37 38.972 10.993 -22.028 1.00 44.16 O ATOM 252 N VAL 38 37.514 10.558 -23.688 1.00102.64 N ATOM 253 CA VAL 38 36.773 11.752 -23.410 1.00102.64 C ATOM 254 CB VAL 38 35.697 12.036 -24.428 1.00102.64 C ATOM 255 CG1 VAL 38 36.371 12.271 -25.791 1.00102.64 C ATOM 256 CG2 VAL 38 34.671 10.893 -24.428 1.00102.64 C ATOM 257 C VAL 38 36.130 11.700 -22.056 1.00102.64 C ATOM 258 O VAL 38 36.241 12.649 -21.281 1.00102.64 O ATOM 259 N ALA 39 35.446 10.587 -21.723 1.00 69.93 N ATOM 260 CA ALA 39 34.699 10.584 -20.496 1.00 69.93 C ATOM 261 CB ALA 39 33.873 9.298 -20.309 1.00 69.93 C ATOM 262 C ALA 39 35.595 10.707 -19.308 1.00 69.93 C ATOM 263 O ALA 39 35.407 11.594 -18.476 1.00 69.93 O ATOM 264 N TYR 40 36.613 9.836 -19.175 1.00304.42 N ATOM 265 CA TYR 40 37.398 10.019 -17.992 1.00304.42 C ATOM 266 CB TYR 40 37.064 8.952 -16.929 1.00304.42 C ATOM 267 CG TYR 40 37.713 9.298 -15.635 1.00304.42 C ATOM 268 CD1 TYR 40 37.317 10.417 -14.938 1.00304.42 C ATOM 269 CD2 TYR 40 38.732 8.522 -15.136 1.00304.42 C ATOM 270 CE1 TYR 40 37.910 10.739 -13.740 1.00304.42 C ATOM 271 CE2 TYR 40 39.326 8.836 -13.936 1.00304.42 C ATOM 272 CZ TYR 40 38.916 9.946 -13.238 1.00304.42 C ATOM 273 OH TYR 40 39.528 10.267 -12.009 1.00304.42 O ATOM 274 C TYR 40 38.832 9.942 -18.378 1.00304.42 C ATOM 275 O TYR 40 39.558 9.066 -17.914 1.00304.42 O ATOM 276 N PRO 41 39.254 10.926 -19.129 1.00195.15 N ATOM 277 CA PRO 41 40.554 10.929 -19.741 1.00195.15 C ATOM 278 CD PRO 41 38.743 12.274 -18.942 1.00195.15 C ATOM 279 CB PRO 41 40.748 12.338 -20.299 1.00195.15 C ATOM 280 CG PRO 41 39.894 13.205 -19.358 1.00195.15 C ATOM 281 C PRO 41 41.671 10.540 -18.838 1.00195.15 C ATOM 282 O PRO 41 42.417 9.627 -19.188 1.00195.15 O ATOM 283 N SER 42 41.794 11.186 -17.670 1.00219.47 N ATOM 284 CA SER 42 42.862 10.872 -16.774 1.00219.47 C ATOM 285 CB SER 42 43.854 12.027 -16.564 1.00219.47 C ATOM 286 OG SER 42 44.480 12.365 -17.792 1.00219.47 O ATOM 287 C SER 42 42.199 10.646 -15.468 1.00219.47 C ATOM 288 O SER 42 40.995 10.429 -15.409 1.00219.47 O ATOM 289 N GLY 43 42.978 10.671 -14.378 1.00265.02 N ATOM 290 CA GLY 43 42.354 10.534 -13.099 1.00265.02 C ATOM 291 C GLY 43 42.676 9.214 -12.480 1.00265.02 C ATOM 292 O GLY 43 42.363 8.997 -11.310 1.00265.02 O ATOM 293 N VAL 44 43.297 8.270 -13.211 1.00210.07 N ATOM 294 CA VAL 44 43.528 7.068 -12.466 1.00210.07 C ATOM 295 CB VAL 44 43.171 5.791 -13.145 1.00210.07 C ATOM 296 CG1 VAL 44 43.589 4.679 -12.175 1.00210.07 C ATOM 297 CG2 VAL 44 41.675 5.794 -13.497 1.00210.07 C ATOM 298 C VAL 44 44.973 6.934 -12.100 1.00210.07 C ATOM 299 O VAL 44 45.834 6.754 -12.960 1.00210.07 O ATOM 300 N ILE 45 45.245 7.011 -10.779 1.00116.93 N ATOM 301 CA ILE 45 46.546 6.830 -10.203 1.00116.93 C ATOM 302 CB ILE 45 47.317 8.120 -10.131 1.00116.93 C ATOM 303 CG2 ILE 45 48.559 7.952 -9.245 1.00116.93 C ATOM 304 CG1 ILE 45 47.660 8.568 -11.560 1.00116.93 C ATOM 305 CD1 ILE 45 48.562 7.583 -12.307 1.00116.93 C ATOM 306 C ILE 45 46.304 6.258 -8.835 1.00116.93 C ATOM 307 O ILE 45 45.177 6.280 -8.345 1.00116.93 O ATOM 308 N PRO 46 47.301 5.708 -8.202 1.00160.78 N ATOM 309 CA PRO 46 47.083 5.161 -6.890 1.00160.78 C ATOM 310 CD PRO 46 48.298 4.948 -8.938 1.00160.78 C ATOM 311 CB PRO 46 48.303 4.292 -6.594 1.00160.78 C ATOM 312 CG PRO 46 48.728 3.812 -7.993 1.00160.78 C ATOM 313 C PRO 46 46.811 6.244 -5.892 1.00160.78 C ATOM 314 O PRO 46 47.048 7.413 -6.196 1.00160.78 O ATOM 315 N ASP 47 46.292 5.882 -4.700 1.00222.02 N ATOM 316 CA ASP 47 45.924 6.870 -3.726 1.00222.02 C ATOM 317 CB ASP 47 45.406 6.297 -2.394 1.00222.02 C ATOM 318 CG ASP 47 44.723 7.427 -1.628 1.00222.02 C ATOM 319 OD1 ASP 47 44.249 8.387 -2.291 1.00222.02 O ATOM 320 OD2 ASP 47 44.668 7.347 -0.371 1.00222.02 O ATOM 321 C ASP 47 47.136 7.669 -3.420 1.00222.02 C ATOM 322 O ASP 47 48.256 7.162 -3.442 1.00222.02 O ATOM 323 N MET 48 46.931 8.971 -3.154 1.00354.77 N ATOM 324 CA MET 48 48.054 9.820 -2.920 1.00354.77 C ATOM 325 CB MET 48 48.452 10.592 -4.180 1.00354.77 C ATOM 326 CG MET 48 47.319 11.528 -4.607 1.00354.77 C ATOM 327 SD MET 48 47.700 12.643 -5.985 1.00354.77 S ATOM 328 CE MET 48 46.041 13.380 -5.999 1.00354.77 C ATOM 329 C MET 48 47.657 10.870 -1.937 1.00354.77 C ATOM 330 O MET 48 46.478 11.187 -1.781 1.00354.77 O ATOM 331 N ARG 49 48.658 11.412 -1.220 1.00261.38 N ATOM 332 CA ARG 49 48.444 12.547 -0.378 1.00261.38 C ATOM 333 CB ARG 49 48.882 12.367 1.085 1.00261.38 C ATOM 334 CG ARG 49 47.847 11.700 1.990 1.00261.38 C ATOM 335 CD ARG 49 46.750 12.666 2.448 1.00261.38 C ATOM 336 NE ARG 49 47.418 13.848 3.068 1.00261.38 N ATOM 337 CZ ARG 49 47.574 13.942 4.421 1.00261.38 C ATOM 338 NH1 ARG 49 47.109 12.948 5.231 1.00261.38 N ATOM 339 NH2 ARG 49 48.203 15.030 4.958 1.00261.38 N ATOM 340 C ARG 49 49.330 13.603 -0.942 1.00261.38 C ATOM 341 O ARG 49 50.534 13.399 -1.091 1.00261.38 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 341 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 39.76 74.4 90 80.4 112 ARMSMC SECONDARY STRUCTURE . . 16.14 91.7 24 70.6 34 ARMSMC SURFACE . . . . . . . . 43.26 75.0 68 81.0 84 ARMSMC BURIED . . . . . . . . 26.13 72.7 22 78.6 28 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 70.59 55.6 36 78.3 46 ARMSSC1 RELIABLE SIDE CHAINS . 70.16 54.5 33 78.6 42 ARMSSC1 SECONDARY STRUCTURE . . 51.81 77.8 9 64.3 14 ARMSSC1 SURFACE . . . . . . . . 69.09 55.2 29 80.6 36 ARMSSC1 BURIED . . . . . . . . 76.50 57.1 7 70.0 10 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 72.91 53.6 28 80.0 35 ARMSSC2 RELIABLE SIDE CHAINS . 75.49 50.0 26 83.9 31 ARMSSC2 SECONDARY STRUCTURE . . 15.27 100.0 8 66.7 12 ARMSSC2 SURFACE . . . . . . . . 70.92 52.4 21 80.8 26 ARMSSC2 BURIED . . . . . . . . 78.56 57.1 7 77.8 9 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 92.20 14.3 7 70.0 10 ARMSSC3 RELIABLE SIDE CHAINS . 98.08 16.7 6 66.7 9 ARMSSC3 SECONDARY STRUCTURE . . 30.00 0.0 1 33.3 3 ARMSSC3 SURFACE . . . . . . . . 75.75 16.7 6 66.7 9 ARMSSC3 BURIED . . . . . . . . 158.37 0.0 1 100.0 1 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 53.43 33.3 3 75.0 4 ARMSSC4 RELIABLE SIDE CHAINS . 53.43 33.3 3 75.0 4 ARMSSC4 SECONDARY STRUCTURE . . 35.69 0.0 1 50.0 2 ARMSSC4 SURFACE . . . . . . . . 53.43 33.3 3 75.0 4 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 4.47 (Number of atoms: 46) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 4.47 46 80.7 57 CRMSCA CRN = ALL/NP . . . . . 0.0972 CRMSCA SECONDARY STRUCTURE . . 1.48 12 70.6 17 CRMSCA SURFACE . . . . . . . . 4.77 35 81.4 43 CRMSCA BURIED . . . . . . . . 3.36 11 78.6 14 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 4.58 226 80.4 281 CRMSMC SECONDARY STRUCTURE . . 1.51 60 70.6 85 CRMSMC SURFACE . . . . . . . . 4.91 173 81.2 213 CRMSMC BURIED . . . . . . . . 3.29 53 77.9 68 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 6.69 157 75.5 208 CRMSSC RELIABLE SIDE CHAINS . 6.86 145 76.3 190 CRMSSC SECONDARY STRUCTURE . . 2.28 46 63.9 72 CRMSSC SURFACE . . . . . . . . 7.12 120 75.0 160 CRMSSC BURIED . . . . . . . . 5.05 37 77.1 48 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 5.61 341 78.2 436 CRMSALL SECONDARY STRUCTURE . . 1.91 94 67.1 140 CRMSALL SURFACE . . . . . . . . 5.99 260 78.3 332 CRMSALL BURIED . . . . . . . . 4.16 81 77.9 104 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 113.805 0.940 0.943 46 80.7 57 ERRCA SECONDARY STRUCTURE . . 75.991 0.963 0.963 12 70.6 17 ERRCA SURFACE . . . . . . . . 111.116 0.935 0.938 35 81.4 43 ERRCA BURIED . . . . . . . . 122.363 0.958 0.960 11 78.6 14 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 113.383 0.940 0.942 226 80.4 281 ERRMC SECONDARY STRUCTURE . . 75.970 0.962 0.963 60 70.6 85 ERRMC SURFACE . . . . . . . . 110.918 0.934 0.937 173 81.2 213 ERRMC BURIED . . . . . . . . 121.431 0.958 0.959 53 77.9 68 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 125.802 0.924 0.928 157 75.5 208 ERRSC RELIABLE SIDE CHAINS . 127.712 0.925 0.928 145 76.3 190 ERRSC SECONDARY STRUCTURE . . 83.276 0.951 0.952 46 63.9 72 ERRSC SURFACE . . . . . . . . 118.251 0.918 0.922 120 75.0 160 ERRSC BURIED . . . . . . . . 150.292 0.944 0.946 37 77.1 48 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 119.326 0.933 0.936 341 78.2 436 ERRALL SECONDARY STRUCTURE . . 79.562 0.957 0.958 94 67.1 140 ERRALL SURFACE . . . . . . . . 114.400 0.928 0.931 260 78.3 332 ERRALL BURIED . . . . . . . . 135.138 0.951 0.953 81 77.9 104 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 5 21 32 40 44 46 57 DISTCA CA (P) 8.77 36.84 56.14 70.18 77.19 57 DISTCA CA (RMS) 0.68 1.49 1.91 2.32 3.15 DISTCA ALL (N) 39 115 204 274 315 341 436 DISTALL ALL (P) 8.94 26.38 46.79 62.84 72.25 436 DISTALL ALL (RMS) 0.75 1.35 1.96 2.58 3.60 DISTALL END of the results output