####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 359), selected 44 , name T0624TS471_1-D1 # Molecule2: number of CA atoms 69 ( 570), selected 44 , name T0624-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0624TS471_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 12 - 36 4.79 14.44 LCS_AVERAGE: 29.78 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 14 - 22 1.94 13.85 LONGEST_CONTINUOUS_SEGMENT: 9 42 - 50 1.66 19.47 LCS_AVERAGE: 10.54 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 6 43 - 48 0.90 16.35 LONGEST_CONTINUOUS_SEGMENT: 6 44 - 49 0.94 16.16 LCS_AVERAGE: 6.13 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT D 12 D 12 4 4 25 3 4 4 4 5 7 9 11 12 17 22 23 25 26 28 28 29 29 29 29 LCS_GDT T 13 T 13 4 4 25 3 4 5 6 8 11 14 14 14 17 22 23 25 26 28 28 29 29 29 29 LCS_GDT E 14 E 14 4 9 25 3 4 4 6 8 11 14 14 14 17 22 23 25 26 28 28 29 29 29 29 LCS_GDT T 15 T 15 4 9 25 3 4 5 6 8 11 14 14 14 17 22 23 25 26 28 28 29 29 29 29 LCS_GDT G 16 G 16 4 9 25 3 4 5 6 8 11 14 14 14 17 22 23 25 26 28 28 29 29 29 29 LCS_GDT R 17 R 17 5 9 25 3 5 6 6 8 11 14 14 14 17 22 23 25 26 28 28 29 29 29 29 LCS_GDT Y 18 Y 18 5 9 25 4 5 6 6 8 11 14 14 14 16 22 23 25 26 28 28 29 29 29 29 LCS_GDT D 19 D 19 5 9 25 4 5 6 6 8 11 14 14 14 17 22 23 25 26 28 28 29 29 29 29 LCS_GDT I 20 I 20 5 9 25 4 5 6 6 8 11 14 14 14 17 22 23 25 26 28 28 29 29 29 29 LCS_GDT R 21 R 21 5 9 25 4 5 6 6 8 11 14 14 14 17 22 23 25 26 28 28 29 29 29 29 LCS_GDT F 22 F 22 5 9 25 3 4 6 6 8 11 14 14 14 17 22 23 25 26 28 28 29 29 29 29 LCS_GDT D 23 D 23 3 8 25 3 4 5 6 8 11 14 14 14 17 22 23 25 26 28 28 29 29 29 29 LCS_GDT L 24 L 24 3 8 25 3 3 5 6 6 8 10 13 14 17 22 23 25 26 28 28 29 29 29 29 LCS_GDT E 25 E 25 4 8 25 3 4 4 6 6 8 9 11 12 17 22 23 25 26 28 28 29 29 29 29 LCS_GDT S 26 S 26 4 8 25 3 4 5 6 6 8 9 11 14 17 22 23 25 26 28 28 29 29 29 29 LCS_GDT F 27 F 27 4 8 25 3 4 5 6 6 8 9 11 13 17 22 23 25 26 28 28 29 29 29 29 LCS_GDT Y 28 Y 28 4 8 25 3 4 5 5 6 8 9 11 12 17 22 23 25 26 28 28 29 29 29 29 LCS_GDT G 29 G 29 4 8 25 3 4 4 6 6 8 8 11 12 17 22 23 25 26 28 28 29 29 29 29 LCS_GDT G 30 G 30 4 8 25 3 4 4 6 6 8 8 10 11 13 16 23 25 26 28 28 29 29 29 29 LCS_GDT L 31 L 31 4 8 25 3 4 4 6 6 8 8 10 11 13 18 23 25 26 28 28 29 29 29 29 LCS_GDT H 32 H 32 4 6 25 3 4 4 5 5 11 14 14 14 17 22 23 25 26 28 28 29 29 29 29 LCS_GDT C 33 C 33 4 6 25 3 4 4 5 5 9 14 14 14 16 21 23 25 26 28 28 29 29 29 29 LCS_GDT G 34 G 34 4 6 25 3 4 5 6 8 11 14 14 14 17 22 23 25 26 28 28 29 29 29 29 LCS_GDT E 35 E 35 3 5 25 3 3 4 4 5 7 10 13 14 17 22 23 25 26 28 28 29 29 29 29 LCS_GDT C 36 C 36 3 5 25 3 3 4 4 5 7 9 10 12 17 22 23 25 26 28 28 29 29 29 29 LCS_GDT F 37 F 37 3 5 22 1 3 3 4 6 7 9 10 11 12 15 17 23 25 28 28 29 29 29 29 LCS_GDT D 38 D 38 3 5 20 0 3 3 4 6 7 8 11 11 12 14 16 22 26 28 28 29 29 29 29 LCS_GDT V 39 V 39 4 5 20 4 4 4 5 6 7 9 11 11 16 21 23 25 26 28 28 29 29 29 29 LCS_GDT K 40 K 40 4 5 18 4 4 4 4 6 7 7 7 8 10 18 18 22 24 27 28 29 29 29 29 LCS_GDT V 41 V 41 4 5 14 4 4 4 4 6 7 7 10 10 11 12 14 15 15 16 18 20 21 23 26 LCS_GDT K 42 K 42 4 9 14 4 4 4 8 9 9 9 10 10 11 12 14 15 15 16 18 20 21 21 24 LCS_GDT D 43 D 43 6 9 14 3 4 6 8 9 9 9 10 10 11 12 14 15 15 16 18 20 21 21 24 LCS_GDT V 44 V 44 6 9 14 5 5 6 8 9 9 9 10 10 11 12 14 15 15 16 18 20 21 21 24 LCS_GDT W 45 W 45 6 9 14 5 5 6 7 9 9 9 10 10 11 12 14 15 15 16 18 20 21 21 24 LCS_GDT V 46 V 46 6 9 14 5 5 6 8 9 9 9 10 10 11 12 14 15 15 16 18 20 21 21 24 LCS_GDT P 47 P 47 6 9 14 5 5 6 8 9 9 9 10 10 11 12 14 15 15 16 18 20 21 21 24 LCS_GDT V 48 V 48 6 9 14 5 5 6 8 9 9 9 10 10 11 12 14 15 15 16 18 20 21 21 24 LCS_GDT R 49 R 49 6 9 14 3 4 5 8 9 9 9 10 10 11 12 14 15 15 16 18 20 21 21 24 LCS_GDT I 50 I 50 4 9 14 3 4 4 8 9 9 9 10 10 11 12 14 15 15 16 18 20 21 21 24 LCS_GDT E 51 E 51 4 5 14 3 4 4 4 6 6 6 7 8 10 12 14 15 15 16 18 20 21 21 24 LCS_GDT M 52 M 52 3 5 14 3 3 4 4 6 6 6 7 8 11 12 14 15 15 16 18 20 21 21 24 LCS_GDT G 53 G 53 3 5 14 3 3 4 4 6 6 6 7 8 8 10 14 15 15 16 18 20 21 21 24 LCS_GDT D 54 D 54 3 5 9 3 3 4 4 6 6 6 6 6 7 9 11 11 13 13 14 16 21 21 24 LCS_GDT D 55 D 55 3 5 8 0 3 3 3 6 6 6 6 8 9 10 11 11 13 16 18 20 21 21 24 LCS_AVERAGE LCS_A: 15.48 ( 6.13 10.54 29.78 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 5 5 6 8 9 11 14 14 14 17 22 23 25 26 28 28 29 29 29 29 GDT PERCENT_AT 7.25 7.25 8.70 11.59 13.04 15.94 20.29 20.29 20.29 24.64 31.88 33.33 36.23 37.68 40.58 40.58 42.03 42.03 42.03 42.03 GDT RMS_LOCAL 0.37 0.37 0.90 1.50 1.66 2.27 2.57 2.57 2.57 3.88 4.33 4.52 4.82 4.89 5.24 5.24 5.46 5.46 5.46 5.46 GDT RMS_ALL_AT 16.72 16.72 16.35 19.39 19.47 13.82 14.39 14.39 14.39 14.70 14.58 14.46 14.28 14.40 14.44 14.44 14.31 14.31 14.31 14.31 # Checking swapping # possible swapping detected: D 12 D 12 # possible swapping detected: D 19 D 19 # possible swapping detected: F 22 F 22 # possible swapping detected: E 25 E 25 # possible swapping detected: Y 28 Y 28 # possible swapping detected: E 35 E 35 # possible swapping detected: F 37 F 37 # possible swapping detected: D 43 D 43 # possible swapping detected: D 54 D 54 # possible swapping detected: D 55 D 55 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA D 12 D 12 7.169 0 0.491 1.272 11.502 19.881 10.119 LGA T 13 T 13 2.856 0 0.085 1.154 4.080 52.262 61.361 LGA E 14 E 14 2.797 0 0.413 1.285 10.232 62.857 32.698 LGA T 15 T 15 3.033 0 0.278 1.310 6.694 57.738 43.129 LGA G 16 G 16 2.685 0 0.597 0.597 3.588 61.667 61.667 LGA R 17 R 17 1.034 0 0.054 0.699 9.478 65.595 40.996 LGA Y 18 Y 18 3.466 0 0.036 0.315 13.215 65.119 24.841 LGA D 19 D 19 1.470 0 0.093 1.219 6.364 69.405 50.833 LGA I 20 I 20 1.319 0 0.088 0.597 7.224 73.571 52.024 LGA R 21 R 21 2.776 0 0.270 1.351 12.917 73.214 30.476 LGA F 22 F 22 1.259 0 0.608 0.461 8.452 75.357 40.043 LGA D 23 D 23 2.688 0 0.624 0.655 5.618 62.976 47.024 LGA L 24 L 24 6.593 0 0.636 0.598 12.452 15.000 7.857 LGA E 25 E 25 7.731 0 0.407 0.813 10.890 7.857 3.704 LGA S 26 S 26 8.256 0 0.230 0.811 9.389 4.286 4.762 LGA F 27 F 27 8.259 0 0.136 1.414 14.376 3.810 2.035 LGA Y 28 Y 28 9.027 0 0.618 0.545 12.874 1.548 0.833 LGA G 29 G 29 9.437 0 0.669 0.669 9.437 2.262 2.262 LGA G 30 G 30 10.151 0 0.577 0.577 10.304 0.714 0.714 LGA L 31 L 31 9.136 0 0.142 0.195 16.209 7.143 3.571 LGA H 32 H 32 2.916 0 0.147 0.986 5.155 45.952 61.333 LGA C 33 C 33 3.246 0 0.061 0.884 8.014 61.548 46.190 LGA G 34 G 34 2.786 0 0.716 0.716 4.934 51.786 51.786 LGA E 35 E 35 7.221 0 0.085 0.714 13.587 16.905 8.042 LGA C 36 C 36 9.730 0 0.333 0.804 13.188 0.476 0.397 LGA F 37 F 37 13.335 0 0.608 1.364 14.253 0.000 0.000 LGA D 38 D 38 12.800 0 0.550 1.153 17.701 0.000 0.000 LGA V 39 V 39 9.419 0 0.606 0.993 10.632 0.357 5.102 LGA K 40 K 40 12.456 0 0.033 1.086 14.952 0.000 0.000 LGA V 41 V 41 17.978 0 0.248 1.072 19.644 0.000 0.000 LGA K 42 K 42 23.254 0 0.372 1.187 25.465 0.000 0.000 LGA D 43 D 43 26.774 0 0.620 0.967 32.029 0.000 0.000 LGA V 44 V 44 26.284 0 0.117 0.123 29.726 0.000 0.000 LGA W 45 W 45 21.972 0 0.141 0.280 23.422 0.000 0.000 LGA V 46 V 46 24.729 0 0.053 1.173 28.833 0.000 0.000 LGA P 47 P 47 23.018 0 0.082 0.204 26.170 0.000 0.000 LGA V 48 V 48 23.796 0 0.576 0.974 23.960 0.000 0.000 LGA R 49 R 49 22.638 0 0.210 1.513 33.507 0.000 0.000 LGA I 50 I 50 20.400 0 0.316 1.353 21.291 0.000 0.000 LGA E 51 E 51 19.867 0 0.552 1.476 24.049 0.000 0.000 LGA M 52 M 52 20.857 0 0.415 1.106 23.546 0.000 0.000 LGA G 53 G 53 23.464 0 0.295 0.295 23.464 0.000 0.000 LGA D 54 D 54 21.099 0 0.611 1.013 23.844 0.000 0.000 LGA D 55 D 55 20.589 0 0.483 0.947 23.237 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 44 176 176 100.00 358 358 100.00 69 SUMMARY(RMSD_GDC): 12.323 12.199 13.201 13.903 10.055 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 69 4.0 14 2.57 19.928 18.030 0.524 LGA_LOCAL RMSD: 2.573 Number of atoms: 14 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 14.392 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 12.323 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.472551 * X + 0.724653 * Y + 0.501571 * Z + 18.392056 Y_new = 0.044382 * X + 0.548834 * Y + -0.834752 * Z + 17.152418 Z_new = -0.880185 * X + 0.416724 * Y + 0.227190 * Z + 13.145306 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.093646 1.076252 1.071659 [DEG: 5.3655 61.6647 61.4016 ] ZXZ: 0.541053 1.341605 -1.128613 [DEG: 31.0000 76.8683 -64.6648 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0624TS471_1-D1 REMARK 2: T0624-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0624TS471_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 69 4.0 14 2.57 18.030 12.32 REMARK ---------------------------------------------------------- MOLECULE T0624TS471_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0624 REMARK MODEL 1 REMARK PARENT 1fgp_A ATOM 1 N ASP 12 11.724 33.599 3.628 1.00 0.00 N ATOM 2 CA ASP 12 10.667 34.081 2.700 1.00 0.00 C ATOM 3 CB ASP 12 11.116 35.371 1.991 1.00 0.00 C ATOM 4 CG ASP 12 11.184 36.449 3.062 1.00 0.00 C ATOM 5 OD1 ASP 12 10.754 36.169 4.211 1.00 0.00 O ATOM 6 OD2 ASP 12 11.657 37.577 2.750 1.00 0.00 O ATOM 7 C ASP 12 10.356 33.050 1.673 1.00 0.00 C ATOM 8 O ASP 12 9.423 32.264 1.834 1.00 0.00 O ATOM 9 N THR 13 11.134 33.034 0.576 1.00 0.00 N ATOM 10 CA THR 13 10.891 32.027 -0.401 1.00 0.00 C ATOM 11 CB THR 13 11.858 32.076 -1.547 1.00 0.00 C ATOM 12 OG1 THR 13 13.188 31.911 -1.072 1.00 0.00 O ATOM 13 CG2 THR 13 11.703 33.417 -2.288 1.00 0.00 C ATOM 14 C THR 13 11.089 30.733 0.308 1.00 0.00 C ATOM 15 O THR 13 10.256 29.837 0.210 1.00 0.00 O ATOM 16 N GLU 14 12.185 30.599 1.072 1.00 0.00 N ATOM 17 CA GLU 14 12.313 29.365 1.777 1.00 0.00 C ATOM 18 CB GLU 14 13.700 29.111 2.419 1.00 0.00 C ATOM 19 CG GLU 14 14.121 30.032 3.567 1.00 0.00 C ATOM 20 CD GLU 14 15.601 29.741 3.826 1.00 0.00 C ATOM 21 OE1 GLU 14 16.230 29.080 2.962 1.00 0.00 O ATOM 22 OE2 GLU 14 16.120 30.178 4.891 1.00 0.00 O ATOM 23 C GLU 14 11.255 29.338 2.832 1.00 0.00 C ATOM 24 O GLU 14 10.616 28.310 3.025 1.00 0.00 O ATOM 25 N THR 15 11.018 30.499 3.491 1.00 0.00 N ATOM 26 CA THR 15 10.040 30.702 4.540 1.00 0.00 C ATOM 27 CB THR 15 8.596 30.642 4.064 1.00 0.00 C ATOM 28 OG1 THR 15 7.730 31.243 5.017 1.00 0.00 O ATOM 29 CG2 THR 15 8.160 29.188 3.821 1.00 0.00 C ATOM 30 C THR 15 10.284 29.762 5.697 1.00 0.00 C ATOM 31 O THR 15 9.370 29.168 6.268 1.00 0.00 O ATOM 32 N GLY 16 11.561 29.633 6.098 1.00 0.00 N ATOM 33 CA GLY 16 11.917 28.820 7.224 1.00 0.00 C ATOM 34 C GLY 16 13.403 28.909 7.337 1.00 0.00 C ATOM 35 O GLY 16 14.062 29.402 6.424 1.00 0.00 O ATOM 36 N ARG 17 13.992 28.478 8.472 1.00 0.00 N ATOM 37 CA ARG 17 15.425 28.506 8.453 1.00 0.00 C ATOM 38 CB ARG 17 16.141 28.673 9.793 1.00 0.00 C ATOM 39 CG ARG 17 16.320 30.117 10.254 1.00 0.00 C ATOM 40 CD ARG 17 17.304 30.917 9.398 1.00 0.00 C ATOM 41 NE ARG 17 17.677 32.115 10.197 1.00 0.00 N ATOM 42 CZ ARG 17 16.984 33.281 10.060 1.00 0.00 C ATOM 43 NH1 ARG 17 15.967 33.375 9.154 1.00 0.00 N ATOM 44 NH2 ARG 17 17.316 34.360 10.832 1.00 0.00 N ATOM 45 C ARG 17 15.896 27.225 7.864 1.00 0.00 C ATOM 46 O ARG 17 15.296 26.172 8.048 1.00 0.00 O ATOM 47 N TYR 18 16.999 27.299 7.102 1.00 0.00 N ATOM 48 CA TYR 18 17.518 26.115 6.501 1.00 0.00 C ATOM 49 CB TYR 18 17.111 25.997 5.013 1.00 0.00 C ATOM 50 CG TYR 18 15.613 25.899 5.032 1.00 0.00 C ATOM 51 CD1 TYR 18 14.984 24.683 5.156 1.00 0.00 C ATOM 52 CD2 TYR 18 14.828 27.027 4.939 1.00 0.00 C ATOM 53 CE1 TYR 18 13.611 24.598 5.207 1.00 0.00 C ATOM 54 CE2 TYR 18 13.460 26.951 4.990 1.00 0.00 C ATOM 55 CZ TYR 18 12.844 25.733 5.121 1.00 0.00 C ATOM 56 OH TYR 18 11.437 25.650 5.181 1.00 0.00 O ATOM 57 C TYR 18 19.012 26.172 6.640 1.00 0.00 C ATOM 58 O TYR 18 19.609 27.248 6.681 1.00 0.00 O ATOM 59 N ASP 19 19.654 24.993 6.778 1.00 0.00 N ATOM 60 CA ASP 19 21.084 24.943 6.922 1.00 0.00 C ATOM 61 CB ASP 19 21.588 23.979 8.015 1.00 0.00 C ATOM 62 CG ASP 19 21.258 24.478 9.415 1.00 0.00 C ATOM 63 OD1 ASP 19 21.013 25.699 9.604 1.00 0.00 O ATOM 64 OD2 ASP 19 21.261 23.611 10.328 1.00 0.00 O ATOM 65 C ASP 19 21.622 24.377 5.652 1.00 0.00 C ATOM 66 O ASP 19 20.979 23.542 5.017 1.00 0.00 O ATOM 67 N ILE 20 22.841 24.790 5.266 1.00 0.00 N ATOM 68 CA ILE 20 23.414 24.309 4.042 1.00 0.00 C ATOM 69 CB ILE 20 24.379 25.283 3.432 1.00 0.00 C ATOM 70 CG2 ILE 20 24.947 24.681 2.136 1.00 0.00 C ATOM 71 CG1 ILE 20 23.741 26.669 3.283 1.00 0.00 C ATOM 72 CD1 ILE 20 22.494 26.711 2.409 1.00 0.00 C ATOM 73 C ILE 20 24.326 23.175 4.373 1.00 0.00 C ATOM 74 O ILE 20 25.422 23.378 4.888 1.00 0.00 O ATOM 75 N ARG 21 23.925 21.936 4.069 1.00 0.00 N ATOM 76 CA ARG 21 24.897 20.907 4.250 1.00 0.00 C ATOM 77 CB ARG 21 24.409 19.614 4.921 1.00 0.00 C ATOM 78 CG ARG 21 25.590 18.677 5.192 1.00 0.00 C ATOM 79 CD ARG 21 25.227 17.276 5.683 1.00 0.00 C ATOM 80 NE ARG 21 26.471 16.474 5.525 1.00 0.00 N ATOM 81 CZ ARG 21 26.664 15.714 4.410 1.00 0.00 C ATOM 82 NH1 ARG 21 25.637 15.520 3.530 1.00 0.00 N ATOM 83 NH2 ARG 21 27.891 15.165 4.164 1.00 0.00 N ATOM 84 C ARG 21 25.294 20.565 2.857 1.00 0.00 C ATOM 85 O ARG 21 24.745 21.119 1.908 1.00 0.00 O ATOM 86 N PHE 22 26.291 19.690 2.664 1.00 0.00 N ATOM 87 CA PHE 22 26.616 19.409 1.300 1.00 0.00 C ATOM 88 CB PHE 22 27.802 18.457 1.075 1.00 0.00 C ATOM 89 CG PHE 22 29.101 19.164 1.250 1.00 0.00 C ATOM 90 CD1 PHE 22 29.698 19.236 2.487 1.00 0.00 C ATOM 91 CD2 PHE 22 29.727 19.738 0.163 1.00 0.00 C ATOM 92 CE1 PHE 22 30.901 19.883 2.640 1.00 0.00 C ATOM 93 CE2 PHE 22 30.929 20.387 0.321 1.00 0.00 C ATOM 94 CZ PHE 22 31.517 20.458 1.558 1.00 0.00 C ATOM 95 C PHE 22 25.452 18.737 0.663 1.00 0.00 C ATOM 96 O PHE 22 25.140 17.585 0.966 1.00 0.00 O ATOM 97 N ASP 23 24.805 19.482 -0.256 1.00 0.00 N ATOM 98 CA ASP 23 23.708 19.040 -1.062 1.00 0.00 C ATOM 99 CB ASP 23 24.108 18.071 -2.182 1.00 0.00 C ATOM 100 CG ASP 23 24.696 18.982 -3.243 1.00 0.00 C ATOM 101 OD1 ASP 23 24.098 20.071 -3.439 1.00 0.00 O ATOM 102 OD2 ASP 23 25.743 18.627 -3.852 1.00 0.00 O ATOM 103 C ASP 23 22.636 18.461 -0.210 1.00 0.00 C ATOM 104 O ASP 23 21.853 17.620 -0.655 1.00 0.00 O ATOM 105 N LEU 24 22.543 18.919 1.047 1.00 0.00 N ATOM 106 CA LEU 24 21.452 18.460 1.847 1.00 0.00 C ATOM 107 CB LEU 24 21.762 17.228 2.716 1.00 0.00 C ATOM 108 CG LEU 24 20.498 16.527 3.255 1.00 0.00 C ATOM 109 CD1 LEU 24 19.560 16.164 2.094 1.00 0.00 C ATOM 110 CD2 LEU 24 20.853 15.269 4.068 1.00 0.00 C ATOM 111 C LEU 24 21.072 19.636 2.700 1.00 0.00 C ATOM 112 O LEU 24 21.909 20.269 3.340 1.00 0.00 O ATOM 113 N GLU 25 19.764 19.964 2.692 1.00 0.00 N ATOM 114 CA GLU 25 19.227 21.133 3.336 1.00 0.00 C ATOM 115 CB GLU 25 18.301 21.953 2.409 1.00 0.00 C ATOM 116 CG GLU 25 17.842 23.303 2.981 1.00 0.00 C ATOM 117 CD GLU 25 18.833 24.401 2.597 1.00 0.00 C ATOM 118 OE1 GLU 25 20.061 24.134 2.588 1.00 0.00 O ATOM 119 OE2 GLU 25 18.358 25.535 2.308 1.00 0.00 O ATOM 120 C GLU 25 18.383 20.730 4.501 1.00 0.00 C ATOM 121 O GLU 25 17.405 19.993 4.357 1.00 0.00 O ATOM 122 N SER 26 18.741 21.222 5.706 1.00 0.00 N ATOM 123 CA SER 26 17.966 20.904 6.875 1.00 0.00 C ATOM 124 CB SER 26 18.820 20.626 8.123 1.00 0.00 C ATOM 125 OG SER 26 19.684 19.520 7.890 1.00 0.00 O ATOM 126 C SER 26 17.036 22.053 7.162 1.00 0.00 C ATOM 127 O SER 26 17.137 23.106 6.545 1.00 0.00 O ATOM 128 N PHE 27 16.081 21.867 8.104 1.00 0.00 N ATOM 129 CA PHE 27 15.121 22.913 8.360 1.00 0.00 C ATOM 130 CB PHE 27 13.745 22.581 7.759 1.00 0.00 C ATOM 131 CG PHE 27 12.724 23.484 8.352 1.00 0.00 C ATOM 132 CD1 PHE 27 12.647 24.805 7.985 1.00 0.00 C ATOM 133 CD2 PHE 27 11.825 22.996 9.269 1.00 0.00 C ATOM 134 CE1 PHE 27 11.688 25.621 8.530 1.00 0.00 C ATOM 135 CE2 PHE 27 10.862 23.809 9.819 1.00 0.00 C ATOM 136 CZ PHE 27 10.798 25.126 9.450 1.00 0.00 C ATOM 137 C PHE 27 14.904 23.160 9.833 1.00 0.00 C ATOM 138 O PHE 27 14.552 22.266 10.600 1.00 0.00 O ATOM 139 N TYR 28 15.026 24.451 10.214 1.00 0.00 N ATOM 140 CA TYR 28 14.905 25.046 11.521 1.00 0.00 C ATOM 141 CB TYR 28 15.714 26.351 11.551 1.00 0.00 C ATOM 142 CG TYR 28 15.248 27.502 12.412 1.00 0.00 C ATOM 143 CD1 TYR 28 14.230 28.337 11.973 1.00 0.00 C ATOM 144 CD2 TYR 28 15.832 27.799 13.629 1.00 0.00 C ATOM 145 CE1 TYR 28 13.817 29.420 12.716 1.00 0.00 C ATOM 146 CE2 TYR 28 15.423 28.882 14.384 1.00 0.00 C ATOM 147 CZ TYR 28 14.416 29.697 13.924 1.00 0.00 C ATOM 148 OH TYR 28 13.996 30.808 14.688 1.00 0.00 O ATOM 149 C TYR 28 13.495 25.423 11.810 1.00 0.00 C ATOM 150 O TYR 28 12.841 26.124 11.037 1.00 0.00 O ATOM 151 N GLY 29 13.008 24.953 12.970 1.00 0.00 N ATOM 152 CA GLY 29 11.709 25.297 13.455 1.00 0.00 C ATOM 153 C GLY 29 11.947 26.388 14.449 1.00 0.00 C ATOM 154 O GLY 29 12.837 27.211 14.261 1.00 0.00 O ATOM 155 N GLY 30 11.100 26.469 15.492 1.00 0.00 N ATOM 156 CA GLY 30 11.282 27.452 16.520 1.00 0.00 C ATOM 157 C GLY 30 12.440 27.149 17.433 1.00 0.00 C ATOM 158 O GLY 30 13.278 28.010 17.697 1.00 0.00 O ATOM 159 N LEU 31 12.554 25.905 17.932 1.00 0.00 N ATOM 160 CA LEU 31 13.535 25.743 18.965 1.00 0.00 C ATOM 161 CB LEU 31 13.156 24.664 19.989 1.00 0.00 C ATOM 162 CG LEU 31 12.006 25.212 20.854 1.00 0.00 C ATOM 163 CD1 LEU 31 11.549 24.214 21.922 1.00 0.00 C ATOM 164 CD2 LEU 31 12.376 26.591 21.436 1.00 0.00 C ATOM 165 C LEU 31 14.873 25.494 18.382 1.00 0.00 C ATOM 166 O LEU 31 15.179 24.394 17.924 1.00 0.00 O ATOM 167 N HIS 32 15.698 26.564 18.389 1.00 0.00 N ATOM 168 CA HIS 32 17.031 26.507 17.873 1.00 0.00 C ATOM 169 ND1 HIS 32 15.430 25.409 15.158 1.00 0.00 N ATOM 170 CG HIS 32 16.718 25.682 15.560 1.00 0.00 C ATOM 171 CB HIS 32 17.129 26.861 16.380 1.00 0.00 C ATOM 172 NE2 HIS 32 16.690 23.717 14.456 1.00 0.00 N ATOM 173 CD2 HIS 32 17.476 24.641 15.119 1.00 0.00 C ATOM 174 CE1 HIS 32 15.468 24.222 14.503 1.00 0.00 C ATOM 175 C HIS 32 17.887 27.469 18.629 1.00 0.00 C ATOM 176 O HIS 32 17.633 28.674 18.669 1.00 0.00 O ATOM 177 N CYS 33 18.953 26.950 19.257 1.00 0.00 N ATOM 178 CA CYS 33 19.788 27.870 19.952 1.00 0.00 C ATOM 179 CB CYS 33 20.781 27.222 20.923 1.00 0.00 C ATOM 180 SG CYS 33 22.066 26.272 20.068 1.00 0.00 S ATOM 181 C CYS 33 20.538 28.630 18.918 1.00 0.00 C ATOM 182 O CYS 33 20.894 28.108 17.862 1.00 0.00 O ATOM 183 N GLY 34 20.776 29.922 19.190 1.00 0.00 N ATOM 184 CA GLY 34 21.471 30.723 18.234 1.00 0.00 C ATOM 185 C GLY 34 22.589 31.401 18.950 1.00 0.00 C ATOM 186 O GLY 34 22.534 31.607 20.163 1.00 0.00 O ATOM 187 N GLU 35 23.657 31.737 18.197 1.00 0.00 N ATOM 188 CA GLU 35 24.786 32.426 18.751 1.00 0.00 C ATOM 189 CB GLU 35 25.981 31.524 19.138 1.00 0.00 C ATOM 190 CG GLU 35 27.148 32.311 19.759 1.00 0.00 C ATOM 191 CD GLU 35 28.269 31.351 20.133 1.00 0.00 C ATOM 192 OE1 GLU 35 28.391 30.298 19.449 1.00 0.00 O ATOM 193 OE2 GLU 35 28.989 31.640 21.127 1.00 0.00 O ATOM 194 C GLU 35 25.294 33.393 17.729 1.00 0.00 C ATOM 195 O GLU 35 25.183 33.175 16.524 1.00 0.00 O ATOM 196 N CYS 36 25.886 34.498 18.218 1.00 0.00 N ATOM 197 CA CYS 36 26.416 35.546 17.391 1.00 0.00 C ATOM 198 CB CYS 36 27.820 35.290 16.797 1.00 0.00 C ATOM 199 SG CYS 36 28.484 36.811 16.044 1.00 0.00 S ATOM 200 C CYS 36 25.478 35.915 16.274 1.00 0.00 C ATOM 201 O CYS 36 25.712 35.589 15.114 1.00 0.00 O ATOM 202 N PHE 37 24.384 36.630 16.615 1.00 0.00 N ATOM 203 CA PHE 37 23.444 37.121 15.648 1.00 0.00 C ATOM 204 CB PHE 37 24.134 37.967 14.557 1.00 0.00 C ATOM 205 CG PHE 37 24.825 39.183 15.098 1.00 0.00 C ATOM 206 CD1 PHE 37 24.148 40.367 15.285 1.00 0.00 C ATOM 207 CD2 PHE 37 26.173 39.155 15.391 1.00 0.00 C ATOM 208 CE1 PHE 37 24.787 41.486 15.769 1.00 0.00 C ATOM 209 CE2 PHE 37 26.818 40.270 15.876 1.00 0.00 C ATOM 210 CZ PHE 37 26.129 41.448 16.059 1.00 0.00 C ATOM 211 C PHE 37 22.787 35.973 14.928 1.00 0.00 C ATOM 212 O PHE 37 22.448 36.091 13.754 1.00 0.00 O ATOM 213 N ASP 38 22.631 34.829 15.624 1.00 0.00 N ATOM 214 CA ASP 38 22.007 33.626 15.141 1.00 0.00 C ATOM 215 CB ASP 38 20.480 33.698 14.906 1.00 0.00 C ATOM 216 CG ASP 38 20.119 34.618 13.745 1.00 0.00 C ATOM 217 OD1 ASP 38 19.946 35.843 13.987 1.00 0.00 O ATOM 218 OD2 ASP 38 19.977 34.098 12.604 1.00 0.00 O ATOM 219 C ASP 38 22.656 33.183 13.870 1.00 0.00 C ATOM 220 O ASP 38 22.032 32.522 13.041 1.00 0.00 O ATOM 221 N VAL 39 23.942 33.530 13.684 1.00 0.00 N ATOM 222 CA VAL 39 24.644 33.118 12.505 1.00 0.00 C ATOM 223 CB VAL 39 25.991 33.759 12.410 1.00 0.00 C ATOM 224 CG1 VAL 39 25.805 35.276 12.220 1.00 0.00 C ATOM 225 CG2 VAL 39 26.762 33.405 13.686 1.00 0.00 C ATOM 226 C VAL 39 24.776 31.634 12.591 1.00 0.00 C ATOM 227 O VAL 39 24.603 30.916 11.608 1.00 0.00 O ATOM 228 N LYS 40 25.071 31.142 13.811 1.00 0.00 N ATOM 229 CA LYS 40 25.157 29.733 14.018 1.00 0.00 C ATOM 230 CB LYS 40 26.491 29.280 14.640 1.00 0.00 C ATOM 231 CG LYS 40 27.670 29.337 13.664 1.00 0.00 C ATOM 232 CD LYS 40 29.033 29.201 14.341 1.00 0.00 C ATOM 233 CE LYS 40 30.188 29.059 13.345 1.00 0.00 C ATOM 234 NZ LYS 40 30.423 30.333 12.624 1.00 0.00 N ATOM 235 C LYS 40 24.059 29.362 14.957 1.00 0.00 C ATOM 236 O LYS 40 23.969 29.881 16.071 1.00 0.00 O ATOM 237 N VAL 41 23.178 28.457 14.501 1.00 0.00 N ATOM 238 CA VAL 41 22.068 27.991 15.284 1.00 0.00 C ATOM 239 CB VAL 41 20.741 28.462 14.754 1.00 0.00 C ATOM 240 CG1 VAL 41 20.610 29.972 15.016 1.00 0.00 C ATOM 241 CG2 VAL 41 20.692 28.135 13.255 1.00 0.00 C ATOM 242 C VAL 41 22.135 26.501 15.228 1.00 0.00 C ATOM 243 O VAL 41 22.795 25.947 14.355 1.00 0.00 O ATOM 244 N LYS 42 21.508 25.796 16.193 1.00 0.00 N ATOM 245 CA LYS 42 21.659 24.368 16.211 1.00 0.00 C ATOM 246 CB LYS 42 22.930 23.983 16.983 1.00 0.00 C ATOM 247 CG LYS 42 24.149 24.714 16.407 1.00 0.00 C ATOM 248 CD LYS 42 25.249 25.008 17.428 1.00 0.00 C ATOM 249 CE LYS 42 26.022 26.290 17.110 1.00 0.00 C ATOM 250 NZ LYS 42 26.158 27.085 18.354 1.00 0.00 N ATOM 251 C LYS 42 20.490 23.813 16.957 1.00 0.00 C ATOM 252 O LYS 42 19.974 24.458 17.868 1.00 0.00 O ATOM 253 N ASP 43 19.999 22.625 16.557 1.00 0.00 N ATOM 254 CA ASP 43 18.957 21.939 17.272 1.00 0.00 C ATOM 255 CB ASP 43 17.804 22.791 17.819 1.00 0.00 C ATOM 256 CG ASP 43 17.095 21.951 18.888 1.00 0.00 C ATOM 257 OD1 ASP 43 17.471 20.759 19.073 1.00 0.00 O ATOM 258 OD2 ASP 43 16.164 22.501 19.532 1.00 0.00 O ATOM 259 C ASP 43 18.387 20.942 16.325 1.00 0.00 C ATOM 260 O ASP 43 19.112 20.072 15.855 1.00 0.00 O ATOM 261 N VAL 44 17.068 21.016 16.021 1.00 0.00 N ATOM 262 CA VAL 44 16.621 20.002 15.112 1.00 0.00 C ATOM 263 CB VAL 44 15.556 19.099 15.667 1.00 0.00 C ATOM 264 CG1 VAL 44 15.151 18.073 14.583 1.00 0.00 C ATOM 265 CG2 VAL 44 16.143 18.444 16.935 1.00 0.00 C ATOM 266 C VAL 44 16.188 20.622 13.824 1.00 0.00 C ATOM 267 O VAL 44 15.302 21.474 13.742 1.00 0.00 O ATOM 268 N TRP 45 16.862 20.171 12.754 1.00 0.00 N ATOM 269 CA TRP 45 16.642 20.731 11.471 1.00 0.00 C ATOM 270 CB TRP 45 17.974 21.215 10.901 1.00 0.00 C ATOM 271 CG TRP 45 18.598 22.217 11.835 1.00 0.00 C ATOM 272 CD2 TRP 45 18.633 23.610 11.550 1.00 0.00 C ATOM 273 CD1 TRP 45 19.156 22.042 13.067 1.00 0.00 C ATOM 274 NE1 TRP 45 19.513 23.263 13.593 1.00 0.00 N ATOM 275 CE2 TRP 45 19.200 24.236 12.658 1.00 0.00 C ATOM 276 CE3 TRP 45 18.217 24.305 10.451 1.00 0.00 C ATOM 277 CZ2 TRP 45 19.348 25.589 12.688 1.00 0.00 C ATOM 278 CZ3 TRP 45 18.378 25.669 10.477 1.00 0.00 C ATOM 279 CH2 TRP 45 18.930 26.298 11.576 1.00 0.00 C ATOM 280 C TRP 45 16.173 19.621 10.596 1.00 0.00 C ATOM 281 O TRP 45 16.987 18.928 9.991 1.00 0.00 O ATOM 282 N VAL 46 14.847 19.469 10.447 1.00 0.00 N ATOM 283 CA VAL 46 14.302 18.404 9.655 1.00 0.00 C ATOM 284 CB VAL 46 12.811 18.418 9.740 1.00 0.00 C ATOM 285 CG1 VAL 46 12.345 19.830 9.353 1.00 0.00 C ATOM 286 CG2 VAL 46 12.244 17.288 8.870 1.00 0.00 C ATOM 287 C VAL 46 14.719 18.592 8.224 1.00 0.00 C ATOM 288 O VAL 46 14.627 19.687 7.677 1.00 0.00 O ATOM 289 N PRO 47 15.242 17.550 7.622 1.00 0.00 N ATOM 290 CA PRO 47 15.674 17.661 6.249 1.00 0.00 C ATOM 291 CD PRO 47 16.051 16.602 8.360 1.00 0.00 C ATOM 292 CB PRO 47 16.768 16.604 6.047 1.00 0.00 C ATOM 293 CG PRO 47 16.642 15.687 7.277 1.00 0.00 C ATOM 294 C PRO 47 14.575 17.597 5.243 1.00 0.00 C ATOM 295 O PRO 47 13.978 16.535 5.080 1.00 0.00 O ATOM 296 N VAL 48 14.243 18.733 4.595 1.00 0.00 N ATOM 297 CA VAL 48 13.312 18.750 3.499 1.00 0.00 C ATOM 298 CB VAL 48 12.567 20.032 3.393 1.00 0.00 C ATOM 299 CG1 VAL 48 13.590 21.175 3.327 1.00 0.00 C ATOM 300 CG2 VAL 48 11.657 19.956 2.153 1.00 0.00 C ATOM 301 C VAL 48 13.968 18.525 2.174 1.00 0.00 C ATOM 302 O VAL 48 13.473 17.764 1.342 1.00 0.00 O ATOM 303 N ARG 49 15.100 19.209 1.911 1.00 0.00 N ATOM 304 CA ARG 49 15.575 19.097 0.563 1.00 0.00 C ATOM 305 CB ARG 49 15.113 20.226 -0.378 1.00 0.00 C ATOM 306 CG ARG 49 15.152 19.795 -1.847 1.00 0.00 C ATOM 307 CD ARG 49 14.935 20.928 -2.851 1.00 0.00 C ATOM 308 NE ARG 49 14.734 20.306 -4.195 1.00 0.00 N ATOM 309 CZ ARG 49 13.470 20.031 -4.646 1.00 0.00 C ATOM 310 NH1 ARG 49 12.394 20.321 -3.861 1.00 0.00 N ATOM 311 NH2 ARG 49 13.251 19.451 -5.864 1.00 0.00 N ATOM 312 C ARG 49 17.058 19.047 0.547 1.00 0.00 C ATOM 313 O ARG 49 17.686 18.873 1.583 1.00 0.00 O ATOM 314 N ILE 50 17.642 19.148 -0.664 1.00 0.00 N ATOM 315 CA ILE 50 19.064 19.045 -0.810 1.00 0.00 C ATOM 316 CB ILE 50 19.408 18.181 -1.994 1.00 0.00 C ATOM 317 CG2 ILE 50 18.885 16.774 -1.680 1.00 0.00 C ATOM 318 CG1 ILE 50 18.814 18.765 -3.290 1.00 0.00 C ATOM 319 CD1 ILE 50 19.317 18.119 -4.581 1.00 0.00 C ATOM 320 C ILE 50 19.692 20.408 -0.968 1.00 0.00 C ATOM 321 O ILE 50 20.155 20.789 -2.038 1.00 0.00 O ATOM 322 N GLU 51 19.837 21.154 0.141 1.00 0.00 N ATOM 323 CA GLU 51 20.455 22.451 0.072 1.00 0.00 C ATOM 324 CB GLU 51 21.881 22.388 -0.513 1.00 0.00 C ATOM 325 CG GLU 51 22.665 23.705 -0.436 1.00 0.00 C ATOM 326 CD GLU 51 23.878 23.584 -1.363 1.00 0.00 C ATOM 327 OE1 GLU 51 23.981 22.539 -2.055 1.00 0.00 O ATOM 328 OE2 GLU 51 24.714 24.528 -1.385 1.00 0.00 O ATOM 329 C GLU 51 19.658 23.341 -0.821 1.00 0.00 C ATOM 330 O GLU 51 20.217 24.119 -1.592 1.00 0.00 O ATOM 331 N MET 52 18.321 23.285 -0.732 1.00 0.00 N ATOM 332 CA MET 52 17.636 24.091 -1.685 1.00 0.00 C ATOM 333 CB MET 52 17.287 23.316 -2.958 1.00 0.00 C ATOM 334 CG MET 52 18.522 22.869 -3.737 1.00 0.00 C ATOM 335 SD MET 52 18.170 21.616 -5.008 1.00 0.00 S ATOM 336 CE MET 52 19.902 21.366 -5.482 1.00 0.00 C ATOM 337 C MET 52 16.347 24.562 -1.122 1.00 0.00 C ATOM 338 O MET 52 16.285 25.454 -0.280 1.00 0.00 O ATOM 339 N GLY 53 15.269 23.949 -1.640 1.00 0.00 N ATOM 340 CA GLY 53 13.943 24.362 -1.334 1.00 0.00 C ATOM 341 C GLY 53 13.607 24.045 0.074 1.00 0.00 C ATOM 342 O GLY 53 14.310 23.319 0.777 1.00 0.00 O ATOM 343 N ASP 54 12.476 24.627 0.500 1.00 0.00 N ATOM 344 CA ASP 54 11.960 24.422 1.813 1.00 0.00 C ATOM 345 CB ASP 54 11.218 25.640 2.406 1.00 0.00 C ATOM 346 CG ASP 54 10.016 26.042 1.567 1.00 0.00 C ATOM 347 OD1 ASP 54 10.217 26.715 0.525 1.00 0.00 O ATOM 348 OD2 ASP 54 8.873 25.693 1.978 1.00 0.00 O ATOM 349 C ASP 54 11.068 23.228 1.764 1.00 0.00 C ATOM 350 O ASP 54 11.069 22.485 0.783 1.00 0.00 O ATOM 351 N ASP 55 10.312 22.983 2.854 1.00 0.00 N ATOM 352 CA ASP 55 9.474 21.822 2.850 1.00 0.00 C ATOM 353 CB ASP 55 8.944 21.417 4.242 1.00 0.00 C ATOM 354 CG ASP 55 8.116 22.536 4.842 1.00 0.00 C ATOM 355 OD1 ASP 55 8.611 23.692 4.900 1.00 0.00 O ATOM 356 OD2 ASP 55 6.967 22.236 5.274 1.00 0.00 O ATOM 357 C ASP 55 8.298 22.032 1.888 1.00 0.00 C ATOM 358 O ASP 55 8.321 21.408 0.794 1.00 0.00 O ATOM 359 OXT ASP 55 7.360 22.805 2.222 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 358 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 92.08 34.9 86 63.2 136 ARMSMC SECONDARY STRUCTURE . . 87.64 40.0 45 62.5 72 ARMSMC SURFACE . . . . . . . . 93.79 34.4 64 65.3 98 ARMSMC BURIED . . . . . . . . 86.90 36.4 22 57.9 38 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 101.17 28.2 39 63.9 61 ARMSSC1 RELIABLE SIDE CHAINS . 100.42 29.4 34 64.2 53 ARMSSC1 SECONDARY STRUCTURE . . 90.37 34.8 23 65.7 35 ARMSSC1 SURFACE . . . . . . . . 101.88 31.0 29 65.9 44 ARMSSC1 BURIED . . . . . . . . 99.09 20.0 10 58.8 17 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 68.45 51.7 29 63.0 46 ARMSSC2 RELIABLE SIDE CHAINS . 66.22 50.0 26 70.3 37 ARMSSC2 SECONDARY STRUCTURE . . 61.95 52.9 17 65.4 26 ARMSSC2 SURFACE . . . . . . . . 73.10 45.5 22 66.7 33 ARMSSC2 BURIED . . . . . . . . 51.17 71.4 7 53.8 13 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 66.66 40.0 10 62.5 16 ARMSSC3 RELIABLE SIDE CHAINS . 66.66 40.0 10 62.5 16 ARMSSC3 SECONDARY STRUCTURE . . 77.69 50.0 6 66.7 9 ARMSSC3 SURFACE . . . . . . . . 69.37 44.4 9 60.0 15 ARMSSC3 BURIED . . . . . . . . 33.59 0.0 1 100.0 1 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 94.32 20.0 5 55.6 9 ARMSSC4 RELIABLE SIDE CHAINS . 94.32 20.0 5 55.6 9 ARMSSC4 SECONDARY STRUCTURE . . 103.07 25.0 4 66.7 6 ARMSSC4 SURFACE . . . . . . . . 94.32 20.0 5 55.6 9 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 12.32 (Number of atoms: 44) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 12.32 44 63.8 69 CRMSCA CRN = ALL/NP . . . . . 0.2801 CRMSCA SECONDARY STRUCTURE . . 12.80 23 63.9 36 CRMSCA SURFACE . . . . . . . . 12.23 33 66.0 50 CRMSCA BURIED . . . . . . . . 12.58 11 57.9 19 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 12.39 215 63.8 337 CRMSMC SECONDARY STRUCTURE . . 12.90 115 64.2 179 CRMSMC SURFACE . . . . . . . . 12.37 161 66.0 244 CRMSMC BURIED . . . . . . . . 12.47 54 58.1 93 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 14.18 182 61.9 294 CRMSSC RELIABLE SIDE CHAINS . 14.20 164 63.6 258 CRMSSC SECONDARY STRUCTURE . . 14.53 111 61.7 180 CRMSSC SURFACE . . . . . . . . 14.26 137 63.4 216 CRMSSC BURIED . . . . . . . . 13.93 45 57.7 78 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 13.24 358 62.8 570 CRMSALL SECONDARY STRUCTURE . . 13.73 203 62.7 324 CRMSALL SURFACE . . . . . . . . 13.28 269 64.7 416 CRMSALL BURIED . . . . . . . . 13.14 89 57.8 154 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 11.511 1.000 0.500 44 63.8 69 ERRCA SECONDARY STRUCTURE . . 11.737 1.000 0.500 23 63.9 36 ERRCA SURFACE . . . . . . . . 11.510 1.000 0.500 33 66.0 50 ERRCA BURIED . . . . . . . . 11.515 1.000 0.500 11 57.9 19 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 11.528 1.000 0.500 215 63.8 337 ERRMC SECONDARY STRUCTURE . . 11.762 1.000 0.500 115 64.2 179 ERRMC SURFACE . . . . . . . . 11.574 1.000 0.500 161 66.0 244 ERRMC BURIED . . . . . . . . 11.389 1.000 0.500 54 58.1 93 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 13.222 1.000 0.500 182 61.9 294 ERRSC RELIABLE SIDE CHAINS . 13.231 1.000 0.500 164 63.6 258 ERRSC SECONDARY STRUCTURE . . 13.350 1.000 0.500 111 61.7 180 ERRSC SURFACE . . . . . . . . 13.361 1.000 0.500 137 63.4 216 ERRSC BURIED . . . . . . . . 12.799 1.000 0.500 45 57.7 78 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 12.306 1.000 0.500 358 62.8 570 ERRALL SECONDARY STRUCTURE . . 12.539 1.000 0.500 203 62.7 324 ERRALL SURFACE . . . . . . . . 12.399 1.000 0.500 269 64.7 416 ERRALL BURIED . . . . . . . . 12.025 1.000 0.500 89 57.8 154 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 1 19 44 69 DISTCA CA (P) 0.00 0.00 0.00 1.45 27.54 69 DISTCA CA (RMS) 0.00 0.00 0.00 3.56 7.43 DISTCA ALL (N) 0 1 2 14 133 358 570 DISTALL ALL (P) 0.00 0.18 0.35 2.46 23.33 570 DISTALL ALL (RMS) 0.00 1.92 2.46 4.22 7.55 DISTALL END of the results output