####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 69 ( 276), selected 69 , name T0624TS328_1-D1 # Molecule2: number of CA atoms 69 ( 570), selected 69 , name T0624-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0624TS328_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 41 - 63 4.76 28.48 LCS_AVERAGE: 24.83 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 43 - 54 1.88 29.53 LCS_AVERAGE: 13.02 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 16 - 23 0.96 19.54 LONGEST_CONTINUOUS_SEGMENT: 8 35 - 42 1.00 25.83 LONGEST_CONTINUOUS_SEGMENT: 8 44 - 51 0.97 29.41 LONGEST_CONTINUOUS_SEGMENT: 8 45 - 52 0.97 29.58 LCS_AVERAGE: 8.44 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 69 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT R 5 R 5 5 9 13 3 4 6 6 7 9 10 10 10 11 11 13 16 19 20 21 22 24 24 27 LCS_GDT E 6 E 6 5 9 13 3 4 6 6 7 9 10 10 10 11 12 13 16 19 20 21 22 24 24 27 LCS_GDT G 7 G 7 5 9 13 3 4 6 6 7 9 10 10 10 11 12 13 16 19 20 22 22 24 24 27 LCS_GDT T 8 T 8 5 9 13 3 4 6 7 7 9 10 10 10 11 12 15 17 20 21 22 23 24 26 27 LCS_GDT L 9 L 9 5 9 13 3 4 6 7 7 9 10 12 17 18 19 20 21 21 22 23 24 25 26 27 LCS_GDT F 10 F 10 5 9 13 3 4 6 7 7 9 10 10 10 11 12 15 17 19 22 23 24 25 26 27 LCS_GDT Y 11 Y 11 4 9 13 3 4 6 7 7 9 10 10 10 11 12 15 17 19 20 21 23 24 25 27 LCS_GDT D 12 D 12 4 9 13 3 3 4 7 7 9 10 10 10 13 13 15 17 19 20 21 22 24 24 27 LCS_GDT T 13 T 13 4 9 13 3 4 5 7 7 9 10 11 11 13 14 15 17 19 20 21 22 24 24 27 LCS_GDT E 14 E 14 4 8 13 3 4 5 7 7 8 10 10 11 12 13 15 17 19 20 21 22 24 24 27 LCS_GDT T 15 T 15 4 8 13 0 4 4 4 5 7 8 9 11 12 14 15 17 19 20 21 22 24 24 27 LCS_GDT G 16 G 16 8 8 13 5 7 8 8 9 9 9 11 11 13 14 15 17 19 20 21 22 24 24 27 LCS_GDT R 17 R 17 8 8 13 4 7 8 8 9 9 9 11 11 13 14 15 17 19 20 21 22 23 23 27 LCS_GDT Y 18 Y 18 8 8 13 5 7 8 8 9 9 9 11 11 13 14 15 17 19 20 21 22 23 23 24 LCS_GDT D 19 D 19 8 8 13 5 7 8 8 9 9 9 11 11 13 14 15 17 19 20 21 22 23 23 24 LCS_GDT I 20 I 20 8 8 13 5 7 8 8 9 9 9 11 11 13 14 15 17 21 23 23 24 26 28 28 LCS_GDT R 21 R 21 8 8 13 3 7 8 8 9 9 9 10 11 12 14 15 17 21 23 23 24 26 28 28 LCS_GDT F 22 F 22 8 8 13 5 7 8 8 9 9 9 10 11 12 14 15 18 21 23 23 24 26 28 28 LCS_GDT D 23 D 23 8 8 13 3 4 7 8 9 9 9 10 11 12 13 14 18 21 23 23 24 26 28 28 LCS_GDT L 24 L 24 3 8 13 3 4 5 7 8 8 9 9 10 11 13 14 18 21 23 23 24 26 28 28 LCS_GDT E 25 E 25 4 7 13 3 3 4 6 7 7 8 9 10 11 12 14 18 21 23 23 24 26 28 28 LCS_GDT S 26 S 26 4 7 12 3 3 4 6 7 7 7 9 10 11 11 12 14 16 21 23 24 25 28 28 LCS_GDT F 27 F 27 4 7 17 3 3 4 6 7 7 7 7 9 13 14 17 18 20 20 21 21 22 24 26 LCS_GDT Y 28 Y 28 4 7 17 3 3 4 6 7 7 7 11 14 15 16 17 19 20 20 21 22 23 24 26 LCS_GDT G 29 G 29 4 7 17 3 3 4 6 7 7 7 11 14 15 16 17 19 20 20 21 22 23 24 26 LCS_GDT G 30 G 30 4 7 17 3 4 4 6 7 7 7 8 9 11 13 17 19 20 20 21 22 22 22 23 LCS_GDT L 31 L 31 4 6 17 3 4 4 5 5 6 7 8 9 11 14 17 19 20 20 21 22 22 22 24 LCS_GDT H 32 H 32 4 6 17 3 4 4 5 6 11 14 14 15 17 17 18 19 20 20 21 22 23 24 26 LCS_GDT C 33 C 33 6 11 17 3 5 7 10 10 13 14 14 15 17 17 18 19 20 20 21 22 23 24 25 LCS_GDT G 34 G 34 6 11 17 3 5 8 10 11 13 14 14 15 17 17 18 19 20 20 21 22 23 24 26 LCS_GDT E 35 E 35 8 11 17 3 6 8 10 11 13 14 14 15 17 17 18 19 20 20 21 22 23 24 26 LCS_GDT C 36 C 36 8 11 17 3 6 8 10 11 13 14 14 15 17 17 18 19 20 20 21 22 23 24 26 LCS_GDT F 37 F 37 8 11 17 3 5 8 10 11 13 14 14 15 17 17 18 19 20 20 21 22 23 24 26 LCS_GDT D 38 D 38 8 11 17 3 6 8 10 11 13 14 14 15 17 17 18 19 20 20 21 22 23 24 26 LCS_GDT V 39 V 39 8 11 17 4 6 8 10 11 13 14 14 15 17 17 18 19 20 20 21 22 23 26 27 LCS_GDT K 40 K 40 8 11 17 4 6 8 10 11 13 14 14 15 17 17 18 19 20 23 23 24 26 28 28 LCS_GDT V 41 V 41 8 11 23 4 6 8 10 11 13 14 14 15 17 17 18 19 21 23 23 24 26 28 28 LCS_GDT K 42 K 42 8 11 23 4 5 8 10 11 13 14 14 15 17 17 19 21 21 23 23 24 26 28 28 LCS_GDT D 43 D 43 4 12 23 3 4 6 9 11 14 16 17 17 18 19 20 21 21 23 23 24 26 28 28 LCS_GDT V 44 V 44 8 12 23 3 6 8 10 15 15 16 17 17 18 19 20 21 21 23 23 24 26 28 28 LCS_GDT W 45 W 45 8 12 23 3 6 8 12 15 15 16 17 17 18 19 20 21 21 23 23 24 26 28 28 LCS_GDT V 46 V 46 8 12 23 3 6 8 12 15 15 16 17 17 18 19 20 21 21 23 23 24 26 28 28 LCS_GDT P 47 P 47 8 12 23 3 6 9 12 15 15 16 17 17 18 19 20 21 21 22 23 24 26 28 28 LCS_GDT V 48 V 48 8 12 23 3 6 9 12 15 15 16 17 17 18 19 20 21 21 22 23 24 26 28 28 LCS_GDT R 49 R 49 8 12 23 4 7 9 12 15 15 16 17 17 18 19 20 21 21 22 23 24 25 26 27 LCS_GDT I 50 I 50 8 12 23 4 7 9 12 15 15 16 17 17 18 19 20 21 21 22 23 24 25 26 27 LCS_GDT E 51 E 51 8 12 23 4 7 9 12 15 15 16 17 17 18 19 20 21 21 22 23 24 25 26 26 LCS_GDT M 52 M 52 8 12 23 4 7 8 11 15 15 16 16 17 18 19 20 21 21 22 23 24 25 26 26 LCS_GDT G 53 G 53 4 12 23 4 4 6 9 11 11 13 14 16 17 18 20 20 21 22 23 23 25 26 26 LCS_GDT D 54 D 54 4 12 23 4 4 8 10 15 15 16 17 17 18 19 20 21 21 22 23 24 25 26 26 LCS_GDT D 55 D 55 4 8 23 4 4 8 9 11 13 15 17 17 18 19 20 21 21 22 23 24 25 26 26 LCS_GDT W 56 W 56 4 8 23 3 4 5 9 11 13 15 17 17 18 19 20 21 21 22 23 24 25 26 26 LCS_GDT Y 57 Y 57 4 7 23 4 7 9 12 15 15 16 17 17 18 19 20 21 21 22 23 24 25 26 26 LCS_GDT L 58 L 58 4 7 23 3 7 9 12 15 15 16 17 17 18 19 20 21 21 22 23 24 25 26 27 LCS_GDT V 59 V 59 4 7 23 3 7 9 12 15 15 16 17 17 18 19 20 21 21 22 23 24 25 28 28 LCS_GDT G 60 G 60 4 7 23 3 4 9 12 15 15 16 17 17 18 19 20 21 21 23 23 24 26 28 28 LCS_GDT L 61 L 61 4 7 23 3 3 5 12 15 15 16 17 17 18 19 20 21 21 23 23 24 26 28 28 LCS_GDT N 62 N 62 4 6 23 3 4 8 8 9 9 9 11 15 17 19 19 21 21 23 23 24 26 28 28 LCS_GDT V 63 V 63 5 6 23 3 4 5 5 7 7 13 13 15 16 16 17 19 21 23 23 24 26 28 28 LCS_GDT S 64 S 64 5 8 13 3 4 5 10 11 12 13 13 15 16 16 17 18 21 23 23 24 26 28 28 LCS_GDT R 65 R 65 5 8 13 3 4 5 10 11 12 13 13 15 16 16 17 18 21 23 23 24 26 28 28 LCS_GDT L 66 L 66 5 8 13 3 4 5 7 9 12 13 13 15 16 16 17 18 21 23 23 24 26 28 28 LCS_GDT D 67 D 67 5 8 13 3 4 5 7 9 12 13 13 14 16 16 17 18 19 20 22 23 26 28 28 LCS_GDT G 68 G 68 6 8 13 3 4 7 10 11 12 13 13 15 16 16 17 18 21 23 23 24 26 28 28 LCS_GDT L 69 L 69 6 8 13 4 6 8 10 11 12 13 14 15 17 17 18 18 21 23 23 24 26 28 28 LCS_GDT R 70 R 70 6 8 13 4 6 8 10 11 13 14 14 15 17 17 18 18 20 23 23 24 26 28 28 LCS_GDT V 71 V 71 6 8 13 4 6 8 10 11 13 14 14 15 17 17 18 19 20 20 21 22 24 26 27 LCS_GDT R 72 R 72 6 8 13 3 6 8 10 11 13 14 14 15 17 17 18 19 20 20 21 22 23 24 26 LCS_GDT M 73 M 73 6 8 13 2 6 8 10 11 12 13 13 15 17 17 18 19 20 20 21 22 23 24 26 LCS_AVERAGE LCS_A: 15.43 ( 8.44 13.02 24.83 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 5 7 9 12 15 15 16 17 17 18 19 20 21 21 23 23 24 26 28 28 GDT PERCENT_AT 7.25 10.14 13.04 17.39 21.74 21.74 23.19 24.64 24.64 26.09 27.54 28.99 30.43 30.43 33.33 33.33 34.78 37.68 40.58 40.58 GDT RMS_LOCAL 0.30 0.55 0.98 1.42 1.82 1.82 2.25 2.69 2.32 2.71 3.19 3.39 3.96 3.90 5.76 4.76 5.21 6.30 6.61 6.61 GDT RMS_ALL_AT 19.26 19.30 29.05 29.13 29.02 29.02 29.35 29.76 29.33 29.63 29.31 29.48 29.31 29.18 19.26 28.48 28.50 19.24 19.19 19.19 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA R 5 R 5 19.540 7 0.508 0.508 21.056 0.000 0.000 LGA E 6 E 6 17.717 5 0.053 0.053 18.552 0.000 0.000 LGA G 7 G 7 13.071 0 0.192 0.192 14.510 0.000 0.000 LGA T 8 T 8 12.101 3 0.009 0.009 12.101 0.119 0.068 LGA L 9 L 9 8.208 4 0.160 0.160 11.997 1.548 0.774 LGA F 10 F 10 13.452 7 0.125 0.125 13.868 0.000 0.000 LGA Y 11 Y 11 16.369 8 0.043 0.043 20.260 0.000 0.000 LGA D 12 D 12 22.680 4 0.219 0.219 24.442 0.000 0.000 LGA T 13 T 13 28.377 3 0.565 0.565 32.224 0.000 0.000 LGA E 14 E 14 32.039 5 0.522 0.522 32.226 0.000 0.000 LGA T 15 T 15 33.345 3 0.327 0.327 33.345 0.000 0.000 LGA G 16 G 16 33.919 0 0.628 0.628 34.011 0.000 0.000 LGA R 17 R 17 32.246 7 0.062 0.062 32.803 0.000 0.000 LGA Y 18 Y 18 28.021 8 0.267 0.267 30.310 0.000 0.000 LGA D 19 D 19 31.111 4 0.111 0.111 31.111 0.000 0.000 LGA I 20 I 20 30.674 4 0.137 0.137 34.448 0.000 0.000 LGA R 21 R 21 34.320 7 0.128 0.128 34.417 0.000 0.000 LGA F 22 F 22 36.840 7 0.607 0.607 38.421 0.000 0.000 LGA D 23 D 23 42.415 4 0.160 0.160 43.657 0.000 0.000 LGA L 24 L 24 46.081 4 0.598 0.598 49.599 0.000 0.000 LGA E 25 E 25 52.499 5 0.467 0.467 53.170 0.000 0.000 LGA S 26 S 26 52.337 2 0.187 0.187 52.984 0.000 0.000 LGA F 27 F 27 54.868 7 0.136 0.136 55.205 0.000 0.000 LGA Y 28 Y 28 55.261 8 0.575 0.575 59.180 0.000 0.000 LGA G 29 G 29 61.836 0 0.428 0.428 63.423 0.000 0.000 LGA G 30 G 30 62.123 0 0.573 0.573 62.123 0.000 0.000 LGA L 31 L 31 57.093 4 0.063 0.063 58.604 0.000 0.000 LGA H 32 H 32 56.189 6 0.378 0.378 56.624 0.000 0.000 LGA C 33 C 33 53.137 2 0.052 0.052 54.376 0.000 0.000 LGA G 34 G 34 48.876 0 0.625 0.625 50.309 0.000 0.000 LGA E 35 E 35 45.733 5 0.188 0.188 46.754 0.000 0.000 LGA C 36 C 36 39.121 2 0.068 0.068 41.799 0.000 0.000 LGA F 37 F 37 33.098 7 0.115 0.115 34.915 0.000 0.000 LGA D 38 D 38 26.346 4 0.182 0.182 28.897 0.000 0.000 LGA V 39 V 39 22.114 3 0.080 0.080 23.168 0.000 0.000 LGA K 40 K 40 16.581 5 0.027 0.027 19.067 0.000 0.000 LGA V 41 V 41 12.033 3 0.090 0.090 12.975 0.714 0.408 LGA K 42 K 42 10.278 5 0.388 0.388 11.209 1.071 0.476 LGA D 43 D 43 5.235 4 0.291 0.291 6.762 34.881 17.440 LGA V 44 V 44 2.021 3 0.114 0.114 3.046 59.167 33.810 LGA W 45 W 45 1.684 10 0.104 0.104 2.359 70.833 20.238 LGA V 46 V 46 1.823 3 0.042 0.042 1.975 72.857 41.633 LGA P 47 P 47 1.963 3 0.057 0.057 2.075 70.833 40.476 LGA V 48 V 48 2.535 3 0.117 0.117 2.535 62.857 35.918 LGA R 49 R 49 2.116 7 0.099 0.099 2.228 68.810 25.022 LGA I 50 I 50 1.731 4 0.087 0.087 1.903 75.000 37.500 LGA E 51 E 51 1.305 5 0.178 0.178 1.510 81.548 36.243 LGA M 52 M 52 3.250 4 0.324 0.324 4.571 42.500 21.250 LGA G 53 G 53 7.424 0 0.083 0.083 7.424 17.500 17.500 LGA D 54 D 54 3.732 4 0.230 0.230 5.298 58.095 29.048 LGA D 55 D 55 4.176 4 0.675 0.675 4.176 42.143 21.071 LGA W 56 W 56 4.032 10 0.043 0.043 4.032 48.690 13.912 LGA Y 57 Y 57 1.753 8 0.189 0.189 2.520 68.929 22.976 LGA L 58 L 58 2.145 4 0.074 0.074 2.273 66.786 33.393 LGA V 59 V 59 1.788 3 0.633 0.633 3.926 65.595 37.483 LGA G 60 G 60 1.828 0 0.682 0.682 3.409 67.143 67.143 LGA L 61 L 61 2.071 4 0.047 0.047 5.819 47.619 23.810 LGA N 62 N 62 8.580 4 0.081 0.081 9.800 5.238 2.619 LGA V 63 V 63 12.560 3 0.188 0.188 16.829 0.000 0.000 LGA S 64 S 64 19.575 2 0.629 0.629 21.976 0.000 0.000 LGA R 65 R 65 23.367 7 0.137 0.137 23.367 0.000 0.000 LGA L 66 L 66 23.200 4 0.638 0.638 24.828 0.000 0.000 LGA D 67 D 67 26.873 4 0.598 0.598 28.093 0.000 0.000 LGA G 68 G 68 27.236 0 0.699 0.699 27.236 0.000 0.000 LGA L 69 L 69 24.626 4 0.107 0.107 27.465 0.000 0.000 LGA R 70 R 70 24.895 7 0.139 0.139 25.108 0.000 0.000 LGA V 71 V 71 27.696 3 0.142 0.142 29.449 0.000 0.000 LGA R 72 R 72 29.814 7 0.235 0.235 31.801 0.000 0.000 LGA M 73 M 73 35.410 4 0.232 0.232 36.533 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 69 276 276 100.00 570 276 48.42 69 SUMMARY(RMSD_GDC): 17.731 17.613 17.613 16.384 8.409 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 69 69 4.0 17 2.69 21.377 20.088 0.609 LGA_LOCAL RMSD: 2.692 Number of atoms: 17 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 29.761 Number of assigned atoms: 69 Std_ASGN_ATOMS RMSD: 17.731 Standard rmsd on all 69 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.555858 * X + 0.148219 * Y + -0.817957 * Z + 44.431732 Y_new = 0.224543 * X + 0.974170 * Y + 0.023933 * Z + -5.940579 Z_new = 0.800377 * X + -0.170363 * Y + -0.574781 * Z + -7.886316 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.757679 -0.927923 -2.853446 [DEG: 158.0034 -53.1661 -163.4904 ] ZXZ: -1.600048 2.183133 1.780520 [DEG: -91.6760 125.0843 102.0163 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0624TS328_1-D1 REMARK 2: T0624-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0624TS328_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 69 69 4.0 17 2.69 20.088 17.73 REMARK ---------------------------------------------------------- MOLECULE T0624TS328_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0624 REMARK MODEL 1 REMARK PARENT 3h4z_A ATOM 1 N ARG 5 15.934 29.848 16.495 1.00 3.00 N ATOM 2 CA ARG 5 16.878 28.878 15.961 1.00 3.00 C ATOM 3 C ARG 5 18.331 29.336 16.084 1.00 3.00 C ATOM 4 O ARG 5 18.689 30.428 15.638 1.00 3.00 O ATOM 5 N GLU 6 19.158 28.489 16.695 1.00 3.00 N ATOM 6 CA GLU 6 20.579 28.773 16.873 1.00 3.00 C ATOM 7 C GLU 6 21.370 27.875 15.927 1.00 3.00 C ATOM 8 O GLU 6 21.074 26.688 15.798 1.00 3.00 O ATOM 9 N GLY 7 22.374 28.439 15.266 1.00 3.00 N ATOM 10 CA GLY 7 23.179 27.664 14.334 1.00 3.00 C ATOM 11 C GLY 7 24.678 27.891 14.502 1.00 3.00 C ATOM 12 O GLY 7 25.143 29.022 14.659 1.00 3.00 O ATOM 13 N THR 8 25.427 26.794 14.476 1.00 3.00 N ATOM 14 CA THR 8 26.874 26.839 14.598 1.00 3.00 C ATOM 15 C THR 8 27.481 26.303 13.310 1.00 3.00 C ATOM 16 O THR 8 27.064 25.258 12.803 1.00 3.00 O ATOM 17 N LEU 9 28.450 27.029 12.767 1.00 3.00 N ATOM 18 CA LEU 9 29.101 26.601 11.540 1.00 3.00 C ATOM 19 C LEU 9 30.609 26.756 11.601 1.00 3.00 C ATOM 20 O LEU 9 31.165 27.206 12.604 1.00 3.00 O ATOM 21 N PHE 10 31.259 26.373 10.510 1.00 3.00 N ATOM 22 CA PHE 10 32.703 26.456 10.393 1.00 3.00 C ATOM 23 C PHE 10 33.062 26.934 8.995 1.00 3.00 C ATOM 24 O PHE 10 32.635 26.351 7.997 1.00 3.00 O ATOM 25 N TYR 11 33.834 28.009 8.930 1.00 3.00 N ATOM 26 CA TYR 11 34.268 28.555 7.655 1.00 3.00 C ATOM 27 C TYR 11 35.787 28.530 7.681 1.00 3.00 C ATOM 28 O TYR 11 36.401 29.108 8.577 1.00 3.00 O ATOM 29 N ASP 12 36.396 27.856 6.711 1.00 3.00 N ATOM 30 CA ASP 12 37.844 27.787 6.691 1.00 3.00 C ATOM 31 C ASP 12 38.477 27.500 5.345 1.00 3.00 C ATOM 32 O ASP 12 37.790 27.263 4.354 1.00 3.00 O ATOM 33 N THR 13 39.805 27.528 5.324 1.00 3.00 N ATOM 34 CA THR 13 40.574 27.274 4.114 1.00 3.00 C ATOM 35 C THR 13 41.371 25.982 4.264 1.00 3.00 C ATOM 36 O THR 13 42.542 25.999 4.646 1.00 3.00 O ATOM 37 N GLU 14 40.724 24.860 3.971 1.00 3.00 N ATOM 38 CA GLU 14 41.369 23.557 4.071 1.00 3.00 C ATOM 39 C GLU 14 41.878 23.139 2.697 1.00 3.00 C ATOM 40 O GLU 14 41.357 23.584 1.672 1.00 3.00 O ATOM 41 N THR 15 42.895 22.285 2.682 1.00 3.00 N ATOM 42 CA THR 15 43.478 21.815 1.430 1.00 3.00 C ATOM 43 C THR 15 44.058 23.018 0.684 1.00 3.00 C ATOM 44 O THR 15 44.091 23.058 -0.546 1.00 3.00 O ATOM 45 N GLY 16 44.506 23.999 1.460 1.00 3.00 N ATOM 46 CA GLY 16 45.104 25.224 0.943 1.00 3.00 C ATOM 47 C GLY 16 45.891 25.834 2.092 1.00 3.00 C ATOM 48 O GLY 16 46.032 25.210 3.143 1.00 3.00 O ATOM 49 N ARG 17 46.402 27.045 1.903 1.00 3.00 N ATOM 50 CA ARG 17 47.168 27.690 2.963 1.00 3.00 C ATOM 51 C ARG 17 46.960 29.196 3.042 1.00 3.00 C ATOM 52 O ARG 17 46.781 29.873 2.029 1.00 3.00 O ATOM 53 N TYR 18 46.975 29.707 4.266 1.00 3.00 N ATOM 54 CA TYR 18 46.824 31.129 4.516 1.00 3.00 C ATOM 55 C TYR 18 48.201 31.631 4.924 1.00 3.00 C ATOM 56 O TYR 18 48.594 31.508 6.083 1.00 3.00 O ATOM 57 N ASP 19 48.939 32.179 3.963 1.00 3.00 N ATOM 58 CA ASP 19 50.280 32.686 4.230 1.00 3.00 C ATOM 59 C ASP 19 50.269 34.153 4.625 1.00 3.00 C ATOM 60 O ASP 19 49.449 34.934 4.147 1.00 3.00 O ATOM 61 N ILE 20 51.191 34.520 5.505 1.00 3.00 N ATOM 62 CA ILE 20 51.314 35.898 5.945 1.00 3.00 C ATOM 63 C ILE 20 52.748 36.344 5.666 1.00 3.00 C ATOM 64 O ILE 20 53.652 36.115 6.467 1.00 3.00 O ATOM 65 N ARG 21 52.947 36.962 4.509 1.00 3.00 N ATOM 66 CA ARG 21 54.260 37.440 4.107 1.00 3.00 C ATOM 67 C ARG 21 54.503 38.799 4.747 1.00 3.00 C ATOM 68 O ARG 21 53.570 39.575 4.934 1.00 3.00 O ATOM 69 N PHE 22 55.757 39.084 5.080 1.00 3.00 N ATOM 70 CA PHE 22 56.095 40.359 5.696 1.00 3.00 C ATOM 71 C PHE 22 57.594 40.566 5.859 1.00 3.00 C ATOM 72 O PHE 22 58.374 39.613 5.847 1.00 3.00 O ATOM 73 N ASP 23 57.986 41.830 5.997 1.00 3.00 N ATOM 74 CA ASP 23 59.384 42.190 6.182 1.00 3.00 C ATOM 75 C ASP 23 59.670 42.156 7.679 1.00 3.00 C ATOM 76 O ASP 23 58.902 42.694 8.477 1.00 3.00 O ATOM 77 N LEU 24 60.768 41.510 8.058 1.00 3.00 N ATOM 78 CA LEU 24 61.134 41.400 9.463 1.00 3.00 C ATOM 79 C LEU 24 62.508 41.978 9.761 1.00 3.00 C ATOM 80 O LEU 24 63.356 42.105 8.877 1.00 3.00 O ATOM 81 N GLU 25 62.708 42.323 11.025 1.00 3.00 N ATOM 82 CA GLU 25 63.961 42.875 11.505 1.00 3.00 C ATOM 83 C GLU 25 64.044 42.570 12.994 1.00 3.00 C ATOM 84 O GLU 25 63.083 42.780 13.733 1.00 3.00 O ATOM 85 N SER 26 65.189 42.060 13.430 1.00 3.00 N ATOM 86 CA SER 26 65.376 41.729 14.836 1.00 3.00 C ATOM 87 C SER 26 66.763 42.131 15.327 1.00 3.00 C ATOM 88 O SER 26 67.674 42.366 14.529 1.00 3.00 O ATOM 89 N PHE 27 66.910 42.216 16.647 1.00 3.00 N ATOM 90 CA PHE 27 68.174 42.604 17.258 1.00 3.00 C ATOM 91 C PHE 27 68.826 41.457 18.015 1.00 3.00 C ATOM 92 O PHE 27 68.229 40.875 18.922 1.00 3.00 O ATOM 93 N TYR 28 70.060 41.144 17.631 1.00 3.00 N ATOM 94 CA TYR 28 70.833 40.079 18.260 1.00 3.00 C ATOM 95 C TYR 28 72.194 40.644 18.654 1.00 3.00 C ATOM 96 O TYR 28 73.121 40.681 17.842 1.00 3.00 O ATOM 97 N GLY 29 72.303 41.092 19.902 1.00 3.00 N ATOM 98 CA GLY 29 73.552 41.657 20.378 1.00 3.00 C ATOM 99 C GLY 29 73.927 42.922 19.629 1.00 3.00 C ATOM 100 O GLY 29 73.518 44.021 20.005 1.00 3.00 O ATOM 101 N GLY 30 74.709 42.767 18.565 1.00 3.00 N ATOM 102 CA GLY 30 75.137 43.903 17.757 1.00 3.00 C ATOM 103 C GLY 30 74.677 43.729 16.313 1.00 3.00 C ATOM 104 O GLY 30 74.884 44.607 15.475 1.00 3.00 O ATOM 105 N LEU 31 74.046 42.592 16.033 1.00 3.00 N ATOM 106 CA LEU 31 73.552 42.292 14.693 1.00 3.00 C ATOM 107 C LEU 31 72.122 42.793 14.503 1.00 3.00 C ATOM 108 O LEU 31 71.213 42.401 15.237 1.00 3.00 O ATOM 109 N HIS 32 71.932 43.663 13.515 1.00 3.00 N ATOM 110 CA HIS 32 70.618 44.220 13.215 1.00 3.00 C ATOM 111 C HIS 32 70.207 43.825 11.796 1.00 3.00 C ATOM 112 O HIS 32 70.208 44.653 10.883 1.00 3.00 O ATOM 113 N CYS 33 69.851 42.544 11.594 1.00 3.00 N ATOM 114 CA CYS 33 69.437 42.014 10.290 1.00 3.00 C ATOM 115 C CYS 33 68.016 42.361 9.848 1.00 3.00 C ATOM 116 O CYS 33 67.105 42.492 10.667 1.00 3.00 O ATOM 117 N GLY 34 67.847 42.499 8.535 1.00 3.00 N ATOM 118 CA GLY 34 66.563 42.821 7.921 1.00 3.00 C ATOM 119 C GLY 34 66.267 41.826 6.805 1.00 3.00 C ATOM 120 O GLY 34 66.980 41.779 5.804 1.00 3.00 O ATOM 121 N GLU 35 65.208 41.040 6.972 1.00 3.00 N ATOM 122 CA GLU 35 64.850 40.044 5.972 1.00 3.00 C ATOM 123 C GLU 35 63.339 39.949 5.744 1.00 3.00 C ATOM 124 O GLU 35 62.573 40.760 6.267 1.00 3.00 O ATOM 125 N CYS 36 62.923 38.963 4.949 1.00 3.00 N ATOM 126 CA CYS 36 61.513 38.743 4.633 1.00 3.00 C ATOM 127 C CYS 36 61.044 37.381 5.157 1.00 3.00 C ATOM 128 O CYS 36 61.712 36.364 4.957 1.00 3.00 O ATOM 129 N PHE 37 59.887 37.365 5.814 1.00 3.00 N ATOM 130 CA PHE 37 59.343 36.135 6.383 1.00 3.00 C ATOM 131 C PHE 37 58.028 35.675 5.750 1.00 3.00 C ATOM 132 O PHE 37 57.243 36.483 5.254 1.00 3.00 O ATOM 133 N ASP 38 57.803 34.365 5.777 1.00 3.00 N ATOM 134 CA ASP 38 56.584 33.766 5.243 1.00 3.00 C ATOM 135 C ASP 38 56.096 32.686 6.198 1.00 3.00 C ATOM 136 O ASP 38 56.681 31.608 6.272 1.00 3.00 O ATOM 137 N VAL 39 55.024 32.978 6.924 1.00 3.00 N ATOM 138 CA VAL 39 54.465 32.024 7.871 1.00 3.00 C ATOM 139 C VAL 39 53.213 31.365 7.304 1.00 3.00 C ATOM 140 O VAL 39 52.244 32.044 6.961 1.00 3.00 O ATOM 141 N LYS 40 53.244 30.040 7.199 1.00 3.00 N ATOM 142 CA LYS 40 52.110 29.289 6.679 1.00 3.00 C ATOM 143 C LYS 40 51.242 28.760 7.812 1.00 3.00 C ATOM 144 O LYS 40 51.745 28.205 8.790 1.00 3.00 O ATOM 145 N VAL 41 49.933 28.942 7.676 1.00 3.00 N ATOM 146 CA VAL 41 48.986 28.465 8.674 1.00 3.00 C ATOM 147 C VAL 41 48.207 27.315 8.068 1.00 3.00 C ATOM 148 O VAL 41 47.624 27.457 6.994 1.00 3.00 O ATOM 149 N LYS 42 48.217 26.169 8.736 1.00 3.00 N ATOM 150 CA LYS 42 47.469 25.018 8.251 1.00 3.00 C ATOM 151 C LYS 42 46.165 24.875 9.019 1.00 3.00 C ATOM 152 O LYS 42 46.140 25.000 10.244 1.00 3.00 O ATOM 153 N ASP 43 45.085 24.613 8.289 1.00 3.00 N ATOM 154 CA ASP 43 43.764 24.447 8.878 1.00 3.00 C ATOM 155 C ASP 43 43.264 25.741 9.509 1.00 3.00 C ATOM 156 O ASP 43 43.076 25.830 10.725 1.00 3.00 O ATOM 157 N VAL 44 43.070 26.749 8.666 1.00 3.00 N ATOM 158 CA VAL 44 42.561 28.036 9.112 1.00 3.00 C ATOM 159 C VAL 44 41.059 27.835 9.263 1.00 3.00 C ATOM 160 O VAL 44 40.382 27.452 8.309 1.00 3.00 O ATOM 161 N TRP 45 40.535 28.086 10.457 1.00 3.00 N ATOM 162 CA TRP 45 39.110 27.895 10.699 1.00 3.00 C ATOM 163 C TRP 45 38.442 29.055 11.434 1.00 3.00 C ATOM 164 O TRP 45 39.062 29.741 12.249 1.00 3.00 O ATOM 165 N VAL 46 37.166 29.258 11.129 1.00 3.00 N ATOM 166 CA VAL 46 36.366 30.305 11.746 1.00 3.00 C ATOM 167 C VAL 46 35.117 29.672 12.349 1.00 3.00 C ATOM 168 O VAL 46 34.433 28.884 11.696 1.00 3.00 O ATOM 169 N PRO 47 34.824 30.014 13.597 1.00 3.00 N ATOM 170 CA PRO 47 33.652 29.470 14.264 1.00 3.00 C ATOM 171 C PRO 47 32.509 30.484 14.228 1.00 3.00 C ATOM 172 O PRO 47 32.602 31.557 14.823 1.00 3.00 O ATOM 173 N VAL 48 31.438 30.132 13.518 1.00 3.00 N ATOM 174 CA VAL 48 30.264 30.991 13.378 1.00 3.00 C ATOM 175 C VAL 48 29.083 30.586 14.251 1.00 3.00 C ATOM 176 O VAL 48 28.819 29.402 14.459 1.00 3.00 O ATOM 177 N ARG 49 28.372 31.592 14.750 1.00 3.00 N ATOM 178 CA ARG 49 27.193 31.385 15.580 1.00 3.00 C ATOM 179 C ARG 49 26.104 32.309 15.060 1.00 3.00 C ATOM 180 O ARG 49 26.254 33.530 15.081 1.00 3.00 O ATOM 181 N ILE 50 25.017 31.720 14.578 1.00 3.00 N ATOM 182 CA ILE 50 23.903 32.487 14.040 1.00 3.00 C ATOM 183 C ILE 50 22.658 32.283 14.880 1.00 3.00 C ATOM 184 O ILE 50 22.554 31.320 15.633 1.00 3.00 O ATOM 185 N GLU 51 21.713 33.201 14.738 1.00 3.00 N ATOM 186 CA GLU 51 20.459 33.129 15.467 1.00 3.00 C ATOM 187 C GLU 51 19.367 33.659 14.546 1.00 3.00 C ATOM 188 O GLU 51 19.450 34.786 14.056 1.00 3.00 O ATOM 189 N MET 52 18.359 32.829 14.291 1.00 3.00 N ATOM 190 CA MET 52 17.260 33.215 13.419 1.00 3.00 C ATOM 191 C MET 52 16.121 34.163 12.983 1.00 3.00 C ATOM 192 O MET 52 15.955 35.265 13.577 1.00 3.00 O ATOM 193 N GLY 53 15.364 33.780 11.939 1.00 3.00 N ATOM 194 CA GLY 53 14.259 34.601 11.453 1.00 3.00 C ATOM 195 C GLY 53 14.753 36.046 11.316 1.00 3.00 C ATOM 196 O GLY 53 15.781 36.280 10.694 1.00 3.00 O ATOM 197 N ASP 54 14.044 37.012 11.913 1.00 3.00 N ATOM 198 CA ASP 54 14.525 38.381 11.861 1.00 3.00 C ATOM 199 C ASP 54 14.816 38.906 13.271 1.00 3.00 C ATOM 200 O ASP 54 14.855 40.130 13.500 1.00 3.00 O ATOM 201 N ASP 55 14.993 37.981 14.216 1.00 3.00 N ATOM 202 CA ASP 55 15.209 38.340 15.576 1.00 3.00 C ATOM 203 C ASP 55 16.632 38.193 15.988 1.00 3.00 C ATOM 204 O ASP 55 17.053 38.828 16.946 1.00 3.00 O ATOM 205 N TRP 56 17.368 37.385 15.263 1.00 3.00 N ATOM 206 CA TRP 56 18.772 37.112 15.564 1.00 3.00 C ATOM 207 C TRP 56 19.680 37.344 14.353 1.00 3.00 C ATOM 208 O TRP 56 19.280 37.185 13.206 1.00 3.00 O ATOM 209 N TYR 57 20.928 37.703 14.607 1.00 3.00 N ATOM 210 CA TYR 57 21.882 37.913 13.546 1.00 3.00 C ATOM 211 C TYR 57 23.090 37.092 14.000 1.00 3.00 C ATOM 212 O TYR 57 22.941 36.029 14.609 1.00 3.00 O ATOM 213 N LEU 58 24.280 37.601 13.695 1.00 3.00 N ATOM 214 CA LEU 58 25.531 36.949 14.059 1.00 3.00 C ATOM 215 C LEU 58 25.659 36.901 15.578 1.00 3.00 C ATOM 216 O LEU 58 25.690 37.936 16.236 1.00 3.00 O ATOM 217 N VAL 59 25.734 35.697 16.130 1.00 3.00 N ATOM 218 CA VAL 59 25.851 35.522 17.574 1.00 3.00 C ATOM 219 C VAL 59 27.300 35.636 18.022 1.00 3.00 C ATOM 220 O VAL 59 27.607 36.312 19.004 1.00 3.00 O ATOM 221 N GLY 60 28.185 34.961 17.297 1.00 3.00 N ATOM 222 CA GLY 60 29.603 34.974 17.618 1.00 3.00 C ATOM 223 C GLY 60 30.471 34.698 16.399 1.00 3.00 C ATOM 224 O GLY 60 30.057 34.014 15.462 1.00 3.00 O ATOM 225 N LEU 61 31.685 35.236 16.430 1.00 3.00 N ATOM 226 CA LEU 61 32.640 35.063 15.344 1.00 3.00 C ATOM 227 C LEU 61 34.039 35.054 15.944 1.00 3.00 C ATOM 228 O LEU 61 34.463 36.030 16.566 1.00 3.00 O ATOM 229 N ASN 62 34.755 33.951 15.763 1.00 3.00 N ATOM 230 CA ASN 62 36.103 33.844 16.300 1.00 3.00 C ATOM 231 C ASN 62 36.983 32.973 15.417 1.00 3.00 C ATOM 232 O ASN 62 36.548 31.928 14.929 1.00 3.00 O ATOM 233 N VAL 63 38.215 33.422 15.203 1.00 3.00 N ATOM 234 CA VAL 63 39.177 32.677 14.402 1.00 3.00 C ATOM 235 C VAL 63 39.870 31.712 15.351 1.00 3.00 C ATOM 236 O VAL 63 40.687 32.121 16.173 1.00 3.00 O ATOM 237 N SER 64 39.532 30.433 15.244 1.00 3.00 N ATOM 238 CA SER 64 40.114 29.414 16.109 1.00 3.00 C ATOM 239 C SER 64 41.638 29.469 16.051 1.00 3.00 C ATOM 240 O SER 64 42.218 29.695 14.988 1.00 3.00 O ATOM 241 N ARG 65 42.284 29.274 17.198 1.00 3.00 N ATOM 242 CA ARG 65 43.738 29.324 17.249 1.00 3.00 C ATOM 243 C ARG 65 44.352 28.306 16.301 1.00 3.00 C ATOM 244 O ARG 65 44.017 27.123 16.329 1.00 3.00 O ATOM 245 N LEU 66 45.255 28.798 15.460 1.00 3.00 N ATOM 246 CA LEU 66 45.941 27.996 14.458 1.00 3.00 C ATOM 247 C LEU 66 46.502 26.688 15.000 1.00 3.00 C ATOM 248 O LEU 66 47.195 26.667 16.017 1.00 3.00 O ATOM 249 N ASP 67 46.192 25.598 14.305 1.00 3.00 N ATOM 250 CA ASP 67 46.651 24.272 14.694 1.00 3.00 C ATOM 251 C ASP 67 48.171 24.240 14.743 1.00 3.00 C ATOM 252 O ASP 67 48.762 23.497 15.527 1.00 3.00 O ATOM 253 N GLY 68 48.798 25.052 13.898 1.00 3.00 N ATOM 254 CA GLY 68 50.251 25.123 13.843 1.00 3.00 C ATOM 255 C GLY 68 50.670 26.231 12.881 1.00 3.00 C ATOM 256 O GLY 68 49.911 26.602 11.982 1.00 3.00 O ATOM 257 N LEU 69 51.876 26.757 13.075 1.00 3.00 N ATOM 258 CA LEU 69 52.401 27.816 12.222 1.00 3.00 C ATOM 259 C LEU 69 53.838 27.514 11.831 1.00 3.00 C ATOM 260 O LEU 69 54.699 27.344 12.693 1.00 3.00 O ATOM 261 N ARG 70 54.093 27.443 10.530 1.00 3.00 N ATOM 262 CA ARG 70 55.436 27.173 10.037 1.00 3.00 C ATOM 263 C ARG 70 56.059 28.446 9.483 1.00 3.00 C ATOM 264 O ARG 70 55.680 28.932 8.417 1.00 3.00 O ATOM 265 N VAL 71 57.025 28.977 10.222 1.00 3.00 N ATOM 266 CA VAL 71 57.715 30.198 9.839 1.00 3.00 C ATOM 267 C VAL 71 58.924 29.928 8.947 1.00 3.00 C ATOM 268 O VAL 71 59.767 29.100 9.273 1.00 3.00 O ATOM 269 N ARG 72 58.996 30.629 7.820 1.00 3.00 N ATOM 270 CA ARG 72 60.116 30.502 6.891 1.00 3.00 C ATOM 271 C ARG 72 60.881 31.831 6.917 1.00 3.00 C ATOM 272 O ARG 72 60.593 32.735 6.130 1.00 3.00 O ATOM 273 N MET 73 61.843 31.947 7.830 1.00 3.00 N ATOM 274 CA MET 73 62.639 33.162 7.967 1.00 3.00 C ATOM 275 C MET 73 63.767 33.184 6.946 1.00 3.00 C ATOM 276 O MET 73 64.724 32.420 7.055 1.00 3.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 276 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 72.84 42.6 136 100.0 136 ARMSMC SECONDARY STRUCTURE . . 44.32 58.3 72 100.0 72 ARMSMC SURFACE . . . . . . . . 79.62 39.8 98 100.0 98 ARMSMC BURIED . . . . . . . . 51.40 50.0 38 100.0 38 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 61 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 53 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 35 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 44 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 17 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 46 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 37 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 26 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 33 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 13 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 16 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 16 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 9 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 15 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 1 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 9 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 9 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 6 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 9 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 17.73 (Number of atoms: 69) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 17.73 69 100.0 69 CRMSCA CRN = ALL/NP . . . . . 0.2570 CRMSCA SECONDARY STRUCTURE . . 16.12 36 100.0 36 CRMSCA SURFACE . . . . . . . . 18.13 50 100.0 50 CRMSCA BURIED . . . . . . . . 16.63 19 100.0 19 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 17.61 276 81.9 337 CRMSMC SECONDARY STRUCTURE . . 16.12 144 80.4 179 CRMSMC SURFACE . . . . . . . . 18.03 200 82.0 244 CRMSMC BURIED . . . . . . . . 16.47 76 81.7 93 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 0.00 0 0.0 294 CRMSSC RELIABLE SIDE CHAINS . 0.00 0 0.0 258 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 180 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 216 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 78 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 17.61 276 48.4 570 CRMSALL SECONDARY STRUCTURE . . 16.12 144 44.4 324 CRMSALL SURFACE . . . . . . . . 18.03 200 48.1 416 CRMSALL BURIED . . . . . . . . 16.47 76 49.4 154 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 13.149 0.640 0.320 69 100.0 69 ERRCA SECONDARY STRUCTURE . . 12.169 0.644 0.322 36 100.0 36 ERRCA SURFACE . . . . . . . . 13.498 0.645 0.322 50 100.0 50 ERRCA BURIED . . . . . . . . 12.231 0.627 0.314 19 100.0 19 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 13.064 0.638 0.319 276 81.9 337 ERRMC SECONDARY STRUCTURE . . 12.163 0.644 0.322 144 80.4 179 ERRMC SURFACE . . . . . . . . 13.421 0.644 0.322 200 82.0 244 ERRMC BURIED . . . . . . . . 12.124 0.625 0.312 76 81.7 93 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.000 0.000 0.000 0 0.0 294 ERRSC RELIABLE SIDE CHAINS . 0.000 0.000 0.000 0 0.0 258 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 180 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 216 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 78 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 13.064 0.638 0.319 276 48.4 570 ERRALL SECONDARY STRUCTURE . . 12.163 0.644 0.322 144 44.4 324 ERRALL SURFACE . . . . . . . . 13.421 0.644 0.322 200 48.1 416 ERRALL BURIED . . . . . . . . 12.124 0.625 0.312 76 49.4 154 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 1 13 69 69 DISTCA CA (P) 0.00 0.00 0.00 1.45 18.84 69 DISTCA CA (RMS) 0.00 0.00 0.00 4.96 7.87 DISTCA ALL (N) 0 0 0 3 54 276 570 DISTALL ALL (P) 0.00 0.00 0.00 0.53 9.47 570 DISTALL ALL (RMS) 0.00 0.00 0.00 4.80 7.90 DISTALL END of the results output