####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 101 ( 501), selected 101 , name T0619TS373_1-D1 # Molecule2: number of CA atoms 101 ( 843), selected 101 , name T0619-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0619TS373_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 48 42 - 89 4.96 17.26 LCS_AVERAGE: 38.98 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 19 - 39 1.66 18.92 LONGEST_CONTINUOUS_SEGMENT: 21 68 - 88 1.78 17.22 LCS_AVERAGE: 15.54 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 70 - 87 1.00 17.34 LONGEST_CONTINUOUS_SEGMENT: 18 71 - 88 0.65 17.40 LCS_AVERAGE: 10.85 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 101 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT L 1 L 1 3 3 33 0 3 3 3 3 7 11 16 16 19 23 27 31 33 33 34 36 37 39 43 LCS_GDT S 2 S 2 10 13 33 4 9 10 11 13 13 14 16 16 19 23 27 31 33 33 34 36 37 38 40 LCS_GDT P 3 P 3 10 13 33 4 9 10 11 13 13 14 16 17 19 23 27 31 33 33 34 36 37 39 43 LCS_GDT R 4 R 4 10 13 33 6 9 10 11 13 13 14 16 17 19 22 26 31 33 33 34 36 37 39 43 LCS_GDT E 5 E 5 10 13 33 6 9 10 11 13 13 14 16 16 19 22 26 31 33 33 34 36 37 39 43 LCS_GDT A 6 A 6 10 13 33 6 9 10 11 13 13 14 16 17 19 23 27 31 33 33 34 36 37 38 40 LCS_GDT R 7 R 7 10 13 33 6 9 10 11 13 13 14 16 17 19 22 25 31 33 33 34 36 37 38 43 LCS_GDT D 8 D 8 10 13 33 6 9 10 11 13 13 14 16 16 19 22 25 31 33 33 34 36 37 39 43 LCS_GDT R 9 R 9 10 13 33 6 9 10 11 13 13 14 16 17 19 23 27 31 33 33 34 36 37 38 40 LCS_GDT Y 10 Y 10 10 13 33 6 9 10 11 13 13 14 16 17 19 23 27 31 33 33 34 36 37 38 38 LCS_GDT L 11 L 11 10 13 33 6 9 10 11 13 13 14 16 16 19 21 25 29 31 33 34 36 37 38 40 LCS_GDT A 12 A 12 4 13 33 3 3 4 11 13 13 14 16 16 19 22 25 31 33 33 34 36 37 38 40 LCS_GDT H 13 H 13 4 13 33 3 9 10 11 13 13 14 16 17 19 23 27 31 33 33 34 36 37 38 40 LCS_GDT R 14 R 14 4 13 33 3 7 10 11 13 13 14 16 16 19 21 25 30 33 33 36 37 39 40 42 LCS_GDT Q 15 Q 15 3 7 33 3 3 4 4 6 8 12 14 17 19 23 27 31 33 33 36 37 39 40 42 LCS_GDT T 16 T 16 3 7 33 3 3 4 10 10 13 14 16 17 22 25 28 31 33 35 37 38 39 40 42 LCS_GDT D 17 D 17 3 5 33 3 3 5 5 7 11 14 17 21 24 28 32 33 34 35 37 38 39 40 42 LCS_GDT A 18 A 18 3 18 33 1 3 5 6 9 14 17 20 21 24 28 32 33 34 35 37 38 39 40 42 LCS_GDT A 19 A 19 16 21 33 10 13 16 19 20 22 22 24 25 27 29 32 33 34 35 37 38 39 40 43 LCS_GDT D 20 D 20 16 21 33 10 13 16 19 20 22 22 24 25 27 29 32 33 34 35 37 38 39 40 43 LCS_GDT A 21 A 21 16 21 33 10 13 16 19 20 22 22 24 25 27 29 32 33 34 35 37 38 39 40 43 LCS_GDT S 22 S 22 16 21 33 10 13 16 19 20 22 22 24 25 27 29 32 33 34 35 37 38 39 40 43 LCS_GDT I 23 I 23 16 21 33 10 13 16 19 20 22 22 24 25 27 29 32 33 34 35 37 38 39 40 43 LCS_GDT K 24 K 24 16 21 33 10 13 16 19 20 22 22 24 25 27 29 32 33 34 35 37 38 39 40 43 LCS_GDT S 25 S 25 16 21 33 10 13 16 19 20 22 22 24 25 27 29 32 33 34 35 37 38 39 40 43 LCS_GDT F 26 F 26 16 21 33 10 13 16 19 20 22 22 24 25 27 29 32 33 34 35 37 38 39 42 48 LCS_GDT R 27 R 27 16 21 33 10 13 16 19 20 22 22 24 25 27 29 32 33 34 35 37 38 39 40 43 LCS_GDT Y 28 Y 28 16 21 33 10 13 16 19 20 22 22 24 25 27 29 32 33 34 35 37 38 39 40 42 LCS_GDT R 29 R 29 16 21 33 10 13 16 19 20 22 22 24 25 27 29 32 33 34 35 37 38 39 40 42 LCS_GDT L 30 L 30 16 21 33 10 13 16 19 20 22 22 24 25 27 29 32 33 34 35 37 41 45 47 50 LCS_GDT K 31 K 31 16 21 33 6 13 16 19 20 22 22 24 25 27 29 32 33 34 35 37 38 39 40 42 LCS_GDT H 32 H 32 16 21 33 6 11 16 19 20 22 22 24 25 27 29 32 33 34 35 37 38 39 40 42 LCS_GDT F 33 F 33 16 21 33 6 11 16 19 20 22 22 24 25 27 29 32 33 34 35 37 38 39 40 42 LCS_GDT V 34 V 34 16 21 32 6 11 16 19 20 22 22 24 25 27 29 32 33 34 35 37 38 42 46 50 LCS_GDT E 35 E 35 15 21 32 3 11 16 19 20 22 22 24 25 27 29 32 33 34 35 37 38 39 40 42 LCS_GDT W 36 W 36 15 21 32 6 11 16 19 20 22 22 24 25 27 29 32 33 34 35 37 38 39 40 42 LCS_GDT A 37 A 37 15 21 32 3 11 15 19 20 22 22 24 25 27 29 32 33 34 35 37 38 39 40 42 LCS_GDT E 38 E 38 12 21 32 3 4 9 15 16 21 21 24 24 27 29 32 33 34 35 37 38 39 40 42 LCS_GDT E 39 E 39 3 21 32 3 3 5 16 20 22 22 24 25 27 29 32 33 34 35 37 38 39 40 42 LCS_GDT R 40 R 40 3 4 32 3 3 5 5 5 7 11 16 20 23 28 32 33 34 35 37 38 39 40 42 LCS_GDT D 41 D 41 3 3 32 3 3 5 5 7 14 15 17 25 27 29 32 34 36 38 41 46 48 48 50 LCS_GDT I 42 I 42 4 4 48 3 3 5 5 16 18 24 25 28 30 31 34 39 40 45 46 47 48 48 50 LCS_GDT T 43 T 43 4 6 48 3 3 19 21 22 23 25 27 27 29 33 34 36 39 45 46 47 48 48 50 LCS_GDT A 44 A 44 5 6 48 4 5 5 5 7 19 23 27 27 29 33 37 44 44 45 46 47 48 48 50 LCS_GDT M 45 M 45 5 6 48 4 5 5 5 8 13 16 21 28 34 37 43 44 44 45 46 47 48 48 50 LCS_GDT R 46 R 46 5 6 48 4 5 5 5 6 7 11 15 27 34 37 43 44 44 45 46 47 48 48 50 LCS_GDT E 47 E 47 5 6 48 4 5 5 5 6 8 11 20 27 33 37 43 44 44 45 46 47 48 48 50 LCS_GDT L 48 L 48 5 11 48 4 5 5 5 10 16 22 26 28 35 38 43 44 44 45 46 47 48 48 50 LCS_GDT T 49 T 49 8 18 48 4 6 8 11 18 21 24 30 32 35 38 43 44 44 45 46 47 47 48 49 LCS_GDT G 50 G 50 8 18 48 4 7 8 11 18 21 24 30 32 35 38 43 44 44 45 46 47 48 48 50 LCS_GDT W 51 W 51 13 18 48 6 9 13 15 18 21 24 30 32 35 38 43 44 44 45 46 47 48 48 50 LCS_GDT K 52 K 52 13 18 48 6 8 13 15 18 21 24 27 32 35 38 43 44 44 45 46 47 48 48 50 LCS_GDT L 53 L 53 13 18 48 6 7 13 15 18 21 23 26 31 35 38 43 44 44 45 46 47 48 48 50 LCS_GDT D 54 D 54 13 18 48 6 7 13 15 18 21 24 30 32 35 38 43 44 44 45 46 47 48 48 50 LCS_GDT E 55 E 55 13 18 48 6 9 13 15 18 21 24 30 32 35 38 43 44 44 45 46 47 48 48 50 LCS_GDT Y 56 Y 56 13 18 48 6 9 13 15 18 21 23 26 29 35 38 43 44 44 45 46 47 48 48 50 LCS_GDT E 57 E 57 13 18 48 4 9 13 15 18 21 24 30 32 35 38 43 44 44 45 46 47 48 48 50 LCS_GDT T 58 T 58 13 18 48 4 9 13 17 20 24 26 30 32 35 38 43 44 44 45 46 47 48 48 50 LCS_GDT F 59 F 59 13 18 48 5 9 13 15 18 21 26 30 32 35 38 43 44 44 45 46 47 48 48 50 LCS_GDT R 60 R 60 13 18 48 5 9 13 15 20 24 26 30 32 35 38 43 44 44 45 46 47 48 48 50 LCS_GDT R 61 R 61 13 18 48 5 9 17 20 22 24 26 30 32 35 38 43 44 44 45 46 47 48 48 50 LCS_GDT G 62 G 62 13 18 48 5 9 19 21 22 24 26 30 32 35 38 43 44 44 45 46 47 48 48 50 LCS_GDT S 63 S 63 13 18 48 3 8 13 15 22 24 26 30 32 35 38 43 44 44 45 46 47 48 48 50 LCS_GDT D 64 D 64 11 18 48 14 17 19 21 22 24 26 30 32 35 38 43 44 44 45 46 47 48 48 50 LCS_GDT V 65 V 65 3 18 48 3 4 18 21 22 23 26 30 32 35 38 43 44 44 45 46 47 48 48 50 LCS_GDT S 66 S 66 4 18 48 4 17 19 21 22 24 26 30 32 35 38 43 44 44 45 46 47 48 48 50 LCS_GDT P 67 P 67 4 17 48 4 5 8 9 12 14 21 24 27 33 37 43 44 44 45 46 47 48 48 50 LCS_GDT A 68 A 68 4 21 48 4 5 5 12 16 17 22 24 28 33 37 43 44 44 45 46 47 48 48 50 LCS_GDT T 69 T 69 5 21 48 4 7 10 17 22 24 26 30 32 35 38 43 44 44 45 46 47 48 48 50 LCS_GDT L 70 L 70 18 21 48 4 6 8 13 22 23 24 26 32 35 38 43 44 44 45 46 47 48 48 50 LCS_GDT N 71 N 71 18 21 48 4 15 18 21 22 24 26 28 30 35 38 43 44 44 45 46 47 48 48 50 LCS_GDT G 72 G 72 18 21 48 7 17 19 21 22 24 26 30 32 35 38 43 44 44 45 46 47 48 48 50 LCS_GDT E 73 E 73 18 21 48 14 17 19 21 22 24 26 30 32 35 38 43 44 44 45 46 47 48 48 50 LCS_GDT M 74 M 74 18 21 48 14 17 19 21 22 24 26 30 32 35 38 43 44 44 45 46 47 48 48 50 LCS_GDT Q 75 Q 75 18 21 48 14 17 19 21 22 24 26 29 32 35 38 43 44 44 45 46 47 48 48 50 LCS_GDT T 76 T 76 18 21 48 14 17 19 21 22 24 26 30 32 35 38 43 44 44 45 46 47 48 48 50 LCS_GDT L 77 L 77 18 21 48 14 17 19 21 22 24 26 30 32 35 38 43 44 44 45 46 47 48 48 50 LCS_GDT K 78 K 78 18 21 48 14 17 19 21 22 24 26 30 32 35 38 43 44 44 45 46 47 48 48 50 LCS_GDT N 79 N 79 18 21 48 14 17 19 21 22 24 26 30 32 35 38 43 44 44 45 46 47 48 48 50 LCS_GDT W 80 W 80 18 21 48 14 17 19 21 22 24 26 30 32 35 38 43 44 44 45 46 47 48 48 50 LCS_GDT L 81 L 81 18 21 48 14 17 19 21 22 24 26 30 32 35 38 43 44 44 45 46 47 48 48 50 LCS_GDT E 82 E 82 18 21 48 14 17 19 21 22 24 26 30 32 35 38 43 44 44 45 46 47 48 48 50 LCS_GDT Y 83 Y 83 18 21 48 14 17 19 21 22 24 26 30 32 35 38 43 44 44 45 46 47 48 48 50 LCS_GDT L 84 L 84 18 21 48 14 17 19 21 22 24 26 30 32 35 38 43 44 44 45 46 47 48 48 50 LCS_GDT A 85 A 85 18 21 48 14 17 19 21 22 24 26 28 31 35 38 43 44 44 45 46 47 48 48 50 LCS_GDT R 86 R 86 18 21 48 14 17 19 21 22 24 26 30 32 35 38 43 44 44 45 46 47 48 48 50 LCS_GDT I 87 I 87 18 21 48 14 17 19 21 22 24 26 30 32 35 38 43 44 44 45 46 47 48 48 50 LCS_GDT D 88 D 88 18 21 48 4 17 19 21 22 24 26 28 30 33 37 42 44 44 45 46 47 48 48 50 LCS_GDT V 89 V 89 3 19 48 3 3 4 6 7 8 9 10 18 25 28 31 31 32 37 41 43 48 48 50 LCS_GDT V 90 V 90 3 6 47 3 3 4 6 7 8 9 11 14 15 19 22 24 26 30 35 37 39 44 47 LCS_GDT D 91 D 91 3 6 44 1 3 4 6 7 8 9 10 14 15 18 19 22 26 30 35 37 42 46 48 LCS_GDT E 92 E 92 7 8 40 4 4 7 7 7 7 9 10 14 15 18 20 25 29 32 40 41 42 46 48 LCS_GDT D 93 D 93 7 8 22 4 6 7 7 7 8 9 10 14 15 18 20 24 26 30 32 37 42 43 44 LCS_GDT L 94 L 94 7 8 22 5 6 7 7 7 8 9 10 14 15 18 19 21 23 26 29 31 33 36 43 LCS_GDT P 95 P 95 7 8 22 5 6 7 7 7 8 9 10 13 15 16 18 20 22 25 27 29 33 39 43 LCS_GDT E 96 E 96 7 8 22 5 6 7 7 7 7 9 10 14 15 18 19 22 26 28 29 31 34 39 43 LCS_GDT K 97 K 97 7 8 22 5 6 7 7 7 7 9 10 14 15 18 19 22 26 28 29 31 33 39 43 LCS_GDT V 98 V 98 7 8 22 5 6 7 7 7 7 9 10 14 15 18 19 21 22 28 29 30 33 39 43 LCS_GDT H 99 H 99 3 8 22 3 3 3 4 7 7 8 10 11 11 14 19 20 22 28 29 37 38 39 43 LCS_GDT V 100 V 100 3 3 22 3 3 3 3 5 6 7 9 11 11 12 14 15 22 28 29 30 33 39 43 LCS_GDT P 101 P 101 3 3 20 0 3 3 3 3 3 5 9 10 10 12 15 18 19 22 24 25 33 39 43 LCS_AVERAGE LCS_A: 21.79 ( 10.85 15.54 38.98 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 14 17 19 21 22 24 26 30 32 35 38 43 44 44 45 46 47 48 48 50 GDT PERCENT_AT 13.86 16.83 18.81 20.79 21.78 23.76 25.74 29.70 31.68 34.65 37.62 42.57 43.56 43.56 44.55 45.54 46.53 47.52 47.52 49.50 GDT RMS_LOCAL 0.25 0.43 0.70 0.91 1.07 1.43 1.89 2.96 3.06 3.26 3.52 4.03 4.10 4.10 4.29 4.48 4.72 5.13 4.96 5.70 GDT RMS_ALL_AT 17.45 17.47 17.38 17.40 17.42 17.30 17.26 17.21 17.28 17.35 17.37 17.50 17.42 17.42 17.44 17.38 17.35 17.21 17.26 17.09 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA L 1 L 1 27.524 4 0.011 0.533 27.524 0.000 0.000 LGA S 2 S 2 25.814 1 0.645 0.607 26.462 0.000 0.000 LGA P 3 P 3 23.191 2 0.135 0.166 24.368 0.000 0.000 LGA R 4 R 4 27.972 6 0.164 0.162 30.520 0.000 0.000 LGA E 5 E 5 27.496 4 0.159 0.153 27.496 0.000 0.000 LGA A 6 A 6 22.492 0 0.024 0.030 24.185 0.000 0.000 LGA R 7 R 7 23.819 6 0.140 0.147 25.514 0.000 0.000 LGA D 8 D 8 28.529 3 0.078 0.071 30.118 0.000 0.000 LGA R 9 R 9 27.003 6 0.086 0.085 27.077 0.000 0.000 LGA Y 10 Y 10 23.998 7 0.197 0.201 25.595 0.000 0.000 LGA L 11 L 11 27.400 3 0.591 0.563 29.149 0.000 0.000 LGA A 12 A 12 32.867 0 0.287 0.288 35.434 0.000 0.000 LGA H 13 H 13 29.293 5 0.110 0.107 30.170 0.000 0.000 LGA R 14 R 14 25.842 6 0.575 0.516 28.251 0.000 0.000 LGA Q 15 Q 15 29.949 4 0.130 0.121 34.215 0.000 0.000 LGA T 16 T 16 33.500 2 0.646 0.597 33.893 0.000 0.000 LGA D 17 D 17 32.738 3 0.171 0.180 34.060 0.000 0.000 LGA A 18 A 18 28.948 0 0.628 0.581 30.378 0.000 0.000 LGA A 19 A 19 26.153 0 0.665 0.606 26.923 0.000 0.000 LGA D 20 D 20 28.145 3 0.041 0.040 30.502 0.000 0.000 LGA A 21 A 21 27.286 0 0.081 0.080 28.316 0.000 0.000 LGA S 22 S 22 21.284 1 0.068 0.067 23.623 0.000 0.000 LGA I 23 I 23 20.419 3 0.088 0.083 21.868 0.000 0.000 LGA K 24 K 24 23.407 4 0.108 0.111 25.762 0.000 0.000 LGA S 25 S 25 20.721 1 0.107 0.105 21.597 0.000 0.000 LGA F 26 F 26 15.287 6 0.096 0.096 17.350 0.000 0.000 LGA R 27 R 27 17.601 6 0.147 0.146 19.365 0.000 0.000 LGA Y 28 Y 28 21.234 7 0.066 0.068 22.911 0.000 0.000 LGA R 29 R 29 17.472 6 0.116 0.119 18.450 0.000 0.000 LGA L 30 L 30 14.086 3 0.053 0.067 15.757 0.000 0.000 LGA K 31 K 31 19.392 4 0.067 0.071 21.300 0.000 0.000 LGA H 32 H 32 21.786 5 0.089 0.086 22.555 0.000 0.000 LGA F 33 F 33 18.213 6 0.060 0.060 19.096 0.000 0.000 LGA V 34 V 34 17.894 2 0.141 0.135 19.939 0.000 0.000 LGA E 35 E 35 23.684 4 0.078 0.080 25.635 0.000 0.000 LGA W 36 W 36 24.880 9 0.145 0.145 25.542 0.000 0.000 LGA A 37 A 37 20.818 0 0.179 0.177 22.365 0.000 0.000 LGA E 38 E 38 24.887 4 0.411 0.399 26.836 0.000 0.000 LGA E 39 E 39 24.232 4 0.596 0.538 24.338 0.000 0.000 LGA R 40 R 40 21.100 6 0.131 0.140 22.283 0.000 0.000 LGA D 41 D 41 16.821 3 0.336 0.341 18.782 0.000 0.000 LGA I 42 I 42 12.049 3 0.571 0.514 14.255 0.000 0.000 LGA T 43 T 43 15.414 2 0.117 0.139 17.530 0.000 0.000 LGA A 44 A 44 12.918 0 0.642 0.583 13.036 0.000 0.000 LGA M 45 M 45 8.418 3 0.078 0.073 10.087 7.976 4.583 LGA R 46 R 46 8.018 6 0.060 0.071 9.289 4.762 1.861 LGA E 47 E 47 9.212 4 0.069 0.079 10.625 4.643 2.063 LGA L 48 L 48 6.861 3 0.643 0.587 8.054 12.976 7.083 LGA T 49 T 49 4.503 2 0.637 0.601 4.676 34.405 25.850 LGA G 50 G 50 4.331 0 0.108 0.108 4.425 37.143 37.143 LGA W 51 W 51 3.634 9 0.076 0.075 4.751 38.810 14.660 LGA K 52 K 52 4.787 4 0.025 0.043 5.253 30.238 16.931 LGA L 53 L 53 5.215 3 0.060 0.060 5.516 31.667 18.512 LGA D 54 D 54 2.980 3 0.079 0.074 3.829 53.690 34.940 LGA E 55 E 55 3.678 4 0.034 0.036 4.305 41.905 22.751 LGA Y 56 Y 56 5.242 7 0.055 0.052 6.546 34.524 12.619 LGA E 57 E 57 3.736 4 0.151 0.150 4.715 54.524 27.725 LGA T 58 T 58 0.950 2 0.068 0.066 2.233 77.381 55.850 LGA F 59 F 59 3.190 6 0.132 0.141 4.503 57.262 23.680 LGA R 60 R 60 1.931 6 0.122 0.120 2.772 79.643 34.156 LGA R 61 R 61 1.596 6 0.036 0.041 3.392 69.524 31.169 LGA G 62 G 62 3.630 0 0.266 0.266 4.838 45.714 45.714 LGA S 63 S 63 3.082 1 0.293 0.403 4.379 61.190 46.984 LGA D 64 D 64 1.866 3 0.194 0.180 3.674 57.619 35.952 LGA V 65 V 65 3.855 2 0.637 0.581 5.511 57.738 36.054 LGA S 66 S 66 1.864 1 0.647 0.592 3.702 58.095 47.063 LGA P 67 P 67 7.769 2 0.077 0.104 9.920 10.833 6.259 LGA A 68 A 68 6.869 0 0.576 0.544 8.760 25.238 20.762 LGA T 69 T 69 1.052 2 0.618 0.594 2.996 71.071 48.776 LGA L 70 L 70 4.636 3 0.125 0.120 6.383 34.762 19.524 LGA N 71 N 71 5.431 3 0.591 0.566 6.354 27.976 16.131 LGA G 72 G 72 3.691 0 0.332 0.332 3.799 50.238 50.238 LGA E 73 E 73 1.861 4 0.094 0.096 2.536 71.071 40.635 LGA M 74 M 74 2.778 3 0.131 0.126 3.740 55.476 33.155 LGA Q 75 Q 75 4.092 4 0.051 0.052 5.037 43.452 22.222 LGA T 76 T 76 2.577 2 0.085 0.083 2.810 65.000 45.306 LGA L 77 L 77 1.587 3 0.139 0.144 2.181 72.976 45.595 LGA K 78 K 78 3.407 4 0.102 0.105 4.311 50.119 26.402 LGA N 79 N 79 2.807 3 0.048 0.046 3.395 62.976 37.738 LGA W 80 W 80 1.630 9 0.136 0.141 2.160 72.976 25.476 LGA L 81 L 81 3.553 3 0.045 0.046 4.607 46.905 27.381 LGA E 82 E 82 3.367 4 0.071 0.070 3.732 51.786 27.831 LGA Y 83 Y 83 1.296 7 0.120 0.119 1.707 77.143 32.500 LGA L 84 L 84 3.483 3 0.056 0.052 4.478 46.905 28.095 LGA A 85 A 85 4.828 0 0.053 0.053 5.340 34.524 32.857 LGA R 86 R 86 3.028 6 0.123 0.117 3.324 53.571 25.368 LGA I 87 I 87 2.964 3 0.247 0.263 5.599 41.786 25.536 LGA D 88 D 88 6.783 3 0.234 0.240 10.957 10.238 6.012 LGA V 89 V 89 12.796 2 0.026 0.036 16.032 0.000 0.000 LGA V 90 V 90 13.645 2 0.640 0.596 13.645 0.000 0.000 LGA D 91 D 91 13.392 3 0.509 0.499 15.999 0.000 0.000 LGA E 92 E 92 12.631 4 0.604 0.543 13.222 0.000 0.000 LGA D 93 D 93 14.393 3 0.495 0.462 18.394 0.000 0.000 LGA L 94 L 94 16.973 3 0.281 0.313 17.536 0.000 0.000 LGA P 95 P 95 17.828 2 0.142 0.159 18.092 0.000 0.000 LGA E 96 E 96 17.298 4 0.063 0.076 17.523 0.000 0.000 LGA K 97 K 97 17.729 4 0.097 0.109 18.358 0.000 0.000 LGA V 98 V 98 19.590 2 0.634 0.577 20.351 0.000 0.000 LGA H 99 H 99 21.316 5 0.617 0.570 22.599 0.000 0.000 LGA V 100 V 100 19.330 2 0.567 0.524 20.816 0.000 0.000 LGA P 101 P 101 24.256 2 0.200 0.227 25.864 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 101 404 403 99.75 843 501 59.43 101 SUMMARY(RMSD_GDC): 13.838 13.798 13.886 20.084 12.150 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 101 101 4.0 30 2.96 28.218 25.523 0.979 LGA_LOCAL RMSD: 2.963 Number of atoms: 30 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 17.209 Number of assigned atoms: 101 Std_ASGN_ATOMS RMSD: 13.838 Standard rmsd on all 101 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.610266 * X + -0.368124 * Y + -0.701471 * Z + 13.244883 Y_new = -0.130186 * X + 0.826834 * Y + -0.547172 * Z + 21.204700 Z_new = 0.781427 * X + 0.425242 * Y + 0.456664 * Z + 26.968302 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.210177 -0.896949 0.749784 [DEG: -12.0422 -51.3914 42.9595 ] ZXZ: -0.908348 1.096555 1.072427 [DEG: -52.0445 62.8280 61.4455 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0619TS373_1-D1 REMARK 2: T0619-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0619TS373_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 101 101 4.0 30 2.96 25.523 13.84 REMARK ---------------------------------------------------------- MOLECULE T0619TS373_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0619 REMARK MODEL 1 REMARK PARENT N/A ATOM 1 CA LEU 1 8.719 15.331 41.167 1.00 0.00 C ATOM 1 C LEU 1 9.952 15.578 40.294 1.00 0.00 C ATOM 1 O LEU 1 11.102 15.387 40.713 1.00 0.00 O ATOM 1 CB LEU 1 7.461 15.310 40.279 1.00 0.00 C ATOM 2 N SER 2 9.671 16.006 39.077 1.00 0.00 N ATOM 2 CA SER 2 10.705 16.306 38.075 1.00 0.00 C ATOM 2 C SER 2 11.533 17.481 38.601 1.00 0.00 C ATOM 2 O SER 2 12.738 17.605 38.337 1.00 0.00 O ATOM 2 CB SER 2 9.995 16.731 36.777 1.00 0.00 C ATOM 3 N PRO 3 10.850 18.330 39.346 1.00 0.00 N ATOM 3 CA PRO 3 11.451 19.528 39.952 1.00 0.00 C ATOM 3 C PRO 3 12.551 19.052 40.905 1.00 0.00 C ATOM 3 O PRO 3 13.499 19.781 41.229 1.00 0.00 O ATOM 3 CB PRO 3 10.376 20.259 40.775 1.00 0.00 C ATOM 4 N ARG 4 12.390 17.816 41.338 1.00 0.00 N ATOM 4 CA ARG 4 13.330 17.160 42.260 1.00 0.00 C ATOM 4 C ARG 4 14.532 16.688 41.440 1.00 0.00 C ATOM 4 O ARG 4 15.593 16.333 41.972 1.00 0.00 O ATOM 4 CB ARG 4 12.642 15.920 42.859 1.00 0.00 C ATOM 5 N GLU 5 14.331 16.696 40.134 1.00 0.00 N ATOM 5 CA GLU 5 15.353 16.281 39.162 1.00 0.00 C ATOM 5 C GLU 5 16.262 17.470 38.838 1.00 0.00 C ATOM 5 O GLU 5 17.337 17.329 38.239 1.00 0.00 O ATOM 5 CB GLU 5 14.627 15.859 37.872 1.00 0.00 C ATOM 6 N ALA 6 15.796 18.633 39.252 1.00 0.00 N ATOM 6 CA ALA 6 16.510 19.904 39.045 1.00 0.00 C ATOM 6 C ALA 6 17.500 20.157 40.185 1.00 0.00 C ATOM 6 O ALA 6 18.566 20.761 40.005 1.00 0.00 O ATOM 6 CB ALA 6 15.475 21.042 39.076 1.00 0.00 C ATOM 7 N ARG 7 17.113 19.678 41.352 1.00 0.00 N ATOM 7 CA ARG 7 17.913 19.809 42.579 1.00 0.00 C ATOM 7 C ARG 7 19.007 18.739 42.556 1.00 0.00 C ATOM 7 O ARG 7 20.066 18.870 43.185 1.00 0.00 O ATOM 7 CB ARG 7 17.012 19.555 43.801 1.00 0.00 C ATOM 8 N ASP 8 18.714 17.687 41.816 1.00 0.00 N ATOM 8 CA ASP 8 19.623 16.542 41.655 1.00 0.00 C ATOM 8 C ASP 8 20.721 16.966 40.677 1.00 0.00 C ATOM 8 O ASP 8 21.842 16.440 40.679 1.00 0.00 O ATOM 8 CB ASP 8 18.852 15.363 41.033 1.00 0.00 C ATOM 9 N ARG 9 20.360 17.929 39.848 1.00 0.00 N ATOM 9 CA ARG 9 21.259 18.486 38.827 1.00 0.00 C ATOM 9 C ARG 9 22.116 19.569 39.488 1.00 0.00 C ATOM 9 O ARG 9 23.242 19.864 39.064 1.00 0.00 O ATOM 9 CB ARG 9 20.414 19.161 37.731 1.00 0.00 C ATOM 10 N TYR 10 21.548 20.142 40.532 1.00 0.00 N ATOM 10 CA TYR 10 22.196 21.207 41.314 1.00 0.00 C ATOM 10 C TYR 10 23.286 20.574 42.181 1.00 0.00 C ATOM 10 O TYR 10 24.086 21.259 42.833 1.00 0.00 O ATOM 10 CB TYR 10 21.150 21.841 42.249 1.00 0.00 C ATOM 11 N LEU 11 23.289 19.254 42.166 1.00 0.00 N ATOM 11 CA LEU 11 24.251 18.444 42.927 1.00 0.00 C ATOM 11 C LEU 11 25.550 18.302 42.130 1.00 0.00 C ATOM 11 O LEU 11 25.634 17.566 41.138 1.00 0.00 O ATOM 11 CB LEU 11 23.651 17.039 43.116 1.00 0.00 C ATOM 12 N ALA 12 26.551 19.027 42.594 1.00 0.00 N ATOM 12 CA ALA 12 27.889 19.040 41.979 1.00 0.00 C ATOM 12 C ALA 12 27.772 19.198 40.459 1.00 0.00 C ATOM 12 O ALA 12 28.708 18.919 39.698 1.00 0.00 O ATOM 12 CB ALA 12 28.545 17.674 42.253 1.00 0.00 C ATOM 13 N HIS 13 26.602 19.651 40.050 1.00 0.00 N ATOM 13 CA HIS 13 26.277 19.877 38.631 1.00 0.00 C ATOM 13 C HIS 13 26.529 21.357 38.332 1.00 0.00 C ATOM 13 O HIS 13 26.593 21.790 37.173 1.00 0.00 O ATOM 13 CB HIS 13 24.786 19.573 38.410 1.00 0.00 C ATOM 14 N ARG 14 26.668 22.107 39.409 1.00 0.00 N ATOM 14 CA ARG 14 26.917 23.555 39.351 1.00 0.00 C ATOM 14 C ARG 14 28.361 23.764 38.884 1.00 0.00 C ATOM 14 O ARG 14 29.330 23.478 39.602 1.00 0.00 O ATOM 14 CB ARG 14 26.771 24.145 40.765 1.00 0.00 C ATOM 15 N GLN 15 28.466 24.268 37.669 1.00 0.00 N ATOM 15 CA GLN 15 29.759 24.548 37.026 1.00 0.00 C ATOM 15 C GLN 15 30.469 23.234 36.688 1.00 0.00 C ATOM 15 O GLN 15 31.666 23.049 36.944 1.00 0.00 O ATOM 15 CB GLN 15 30.635 25.296 38.051 1.00 0.00 C ATOM 16 N THR 16 29.695 22.336 36.109 1.00 0.00 N ATOM 16 CA THR 16 30.173 21.005 35.700 1.00 0.00 C ATOM 16 C THR 16 29.820 20.737 34.233 1.00 0.00 C ATOM 16 O THR 16 28.715 21.030 33.762 1.00 0.00 O ATOM 16 CB THR 16 29.443 19.934 36.529 1.00 0.00 C ATOM 17 N ASP 17 30.790 20.174 33.538 1.00 0.00 N ATOM 17 CA ASP 17 30.663 19.830 32.112 1.00 0.00 C ATOM 17 C ASP 17 29.579 18.749 32.102 1.00 0.00 C ATOM 17 O ASP 17 29.115 18.294 31.047 1.00 0.00 O ATOM 17 CB ASP 17 31.999 19.235 31.632 1.00 0.00 C ATOM 18 N ALA 18 29.197 18.360 33.304 1.00 0.00 N ATOM 18 CA ALA 18 28.168 17.332 33.524 1.00 0.00 C ATOM 18 C ALA 18 26.789 17.995 33.456 1.00 0.00 C ATOM 18 O ALA 18 25.789 17.390 33.045 1.00 0.00 O ATOM 18 CB ALA 18 28.357 16.797 34.956 1.00 0.00 C ATOM 19 N ALA 19 26.774 19.248 33.868 1.00 0.00 N ATOM 19 CA ALA 19 25.556 20.073 33.887 1.00 0.00 C ATOM 19 C ALA 19 25.129 20.210 32.423 1.00 0.00 C ATOM 19 O ALA 19 24.049 20.725 32.100 1.00 0.00 O ATOM 19 CB ALA 19 25.895 21.466 34.444 1.00 0.00 C ATOM 20 N ASP 20 26.008 19.734 31.561 1.00 0.00 N ATOM 20 CA ASP 20 25.798 19.764 30.106 1.00 0.00 C ATOM 20 C ASP 20 24.986 18.549 29.652 1.00 0.00 C ATOM 20 O ASP 20 24.223 18.596 28.677 1.00 0.00 O ATOM 20 CB ASP 20 27.176 19.662 29.426 1.00 0.00 C ATOM 21 N ALA 21 25.173 17.470 30.388 1.00 0.00 N ATOM 21 CA ALA 21 24.493 16.192 30.128 1.00 0.00 C ATOM 21 C ALA 21 23.075 16.245 30.704 1.00 0.00 C ATOM 21 O ALA 21 22.180 15.483 30.315 1.00 0.00 O ATOM 21 CB ALA 21 25.250 15.070 30.861 1.00 0.00 C ATOM 22 N SER 22 22.908 17.166 31.636 1.00 0.00 N ATOM 22 CA SER 22 21.627 17.388 32.321 1.00 0.00 C ATOM 22 C SER 22 20.736 18.339 31.517 1.00 0.00 C ATOM 22 O SER 22 19.500 18.273 31.559 1.00 0.00 O ATOM 22 CB SER 22 21.921 18.048 33.680 1.00 0.00 C ATOM 23 N ILE 23 21.403 19.215 30.790 1.00 0.00 N ATOM 23 CA ILE 23 20.745 20.221 29.942 1.00 0.00 C ATOM 23 C ILE 23 20.222 19.516 28.687 1.00 0.00 C ATOM 23 O ILE 23 19.246 19.942 28.054 1.00 0.00 O ATOM 23 CB ILE 23 21.775 21.289 29.537 1.00 0.00 C ATOM 24 N LYS 24 20.900 18.432 28.357 1.00 0.00 N ATOM 24 CA LYS 24 20.567 17.603 27.188 1.00 0.00 C ATOM 24 C LYS 24 19.517 16.583 27.638 1.00 0.00 C ATOM 24 O LYS 24 18.757 16.026 26.834 1.00 0.00 O ATOM 24 CB LYS 24 21.809 16.813 26.738 1.00 0.00 C ATOM 25 N SER 25 19.504 16.364 28.939 1.00 0.00 N ATOM 25 CA SER 25 18.576 15.422 29.584 1.00 0.00 C ATOM 25 C SER 25 17.230 16.097 29.867 1.00 0.00 C ATOM 25 O SER 25 16.183 15.447 29.984 1.00 0.00 O ATOM 25 CB SER 25 19.207 15.024 30.930 1.00 0.00 C ATOM 26 N PHE 26 17.297 17.410 29.971 1.00 0.00 N ATOM 26 CA PHE 26 16.123 18.255 30.240 1.00 0.00 C ATOM 26 C PHE 26 15.398 18.599 28.936 1.00 0.00 C ATOM 26 O PHE 26 14.186 18.854 28.906 1.00 0.00 O ATOM 26 CB PHE 26 16.609 19.579 30.856 1.00 0.00 C ATOM 27 N ARG 27 16.178 18.597 27.871 1.00 0.00 N ATOM 27 CA ARG 27 15.688 18.899 26.518 1.00 0.00 C ATOM 27 C ARG 27 14.975 17.684 25.919 1.00 0.00 C ATOM 27 O ARG 27 14.154 17.793 24.997 1.00 0.00 O ATOM 27 CB ARG 27 16.887 19.237 25.615 1.00 0.00 C ATOM 28 N TYR 28 15.314 16.535 26.472 1.00 0.00 N ATOM 28 CA TYR 28 14.751 15.243 26.049 1.00 0.00 C ATOM 28 C TYR 28 13.473 14.897 26.819 1.00 0.00 C ATOM 28 O TYR 28 12.559 14.234 26.309 1.00 0.00 O ATOM 28 CB TYR 28 15.773 14.132 26.344 1.00 0.00 C ATOM 29 N ARG 29 13.444 15.366 28.052 1.00 0.00 N ATOM 29 CA ARG 29 12.313 15.149 28.967 1.00 0.00 C ATOM 29 C ARG 29 11.137 16.008 28.496 1.00 0.00 C ATOM 29 O ARG 29 9.962 15.722 28.773 1.00 0.00 O ATOM 29 CB ARG 29 12.670 15.610 30.391 1.00 0.00 C ATOM 30 N LEU 30 11.491 17.060 27.783 1.00 0.00 N ATOM 30 CA LEU 30 10.522 18.018 27.232 1.00 0.00 C ATOM 30 C LEU 30 9.982 17.527 25.886 1.00 0.00 C ATOM 30 O LEU 30 8.868 17.865 25.463 1.00 0.00 O ATOM 30 CB LEU 30 11.246 19.356 26.994 1.00 0.00 C ATOM 31 N LYS 31 10.805 16.725 25.237 1.00 0.00 N ATOM 31 CA LYS 31 10.486 16.139 23.926 1.00 0.00 C ATOM 31 C LYS 31 9.627 14.884 24.104 1.00 0.00 C ATOM 31 O LYS 31 8.841 14.496 23.229 1.00 0.00 O ATOM 31 CB LYS 31 11.787 15.693 23.236 1.00 0.00 C ATOM 32 N HIS 32 9.804 14.271 25.260 1.00 0.00 N ATOM 32 CA HIS 32 9.082 13.047 25.638 1.00 0.00 C ATOM 32 C HIS 32 7.639 13.391 26.018 1.00 0.00 C ATOM 32 O HIS 32 6.737 12.542 26.004 1.00 0.00 O ATOM 32 CB HIS 32 9.763 12.440 26.876 1.00 0.00 C ATOM 33 N PHE 33 7.457 14.655 26.355 1.00 0.00 N ATOM 33 CA PHE 33 6.149 15.198 26.753 1.00 0.00 C ATOM 33 C PHE 33 5.348 15.701 25.551 1.00 0.00 C ATOM 33 O PHE 33 4.110 15.637 25.513 1.00 0.00 O ATOM 33 CB PHE 33 6.405 16.421 27.651 1.00 0.00 C ATOM 34 N VAL 34 6.091 16.201 24.581 1.00 0.00 N ATOM 34 CA VAL 34 5.525 16.740 23.335 1.00 0.00 C ATOM 34 C VAL 34 5.308 15.633 22.300 1.00 0.00 C ATOM 34 O VAL 34 4.534 15.773 21.342 1.00 0.00 O ATOM 34 CB VAL 34 6.520 17.775 22.782 1.00 0.00 C ATOM 35 N GLU 35 6.013 14.541 22.525 1.00 0.00 N ATOM 35 CA GLU 35 5.956 13.357 21.654 1.00 0.00 C ATOM 35 C GLU 35 4.710 12.559 22.046 1.00 0.00 C ATOM 35 O GLU 35 4.114 11.833 21.238 1.00 0.00 O ATOM 35 CB GLU 35 7.187 12.462 21.886 1.00 0.00 C ATOM 36 N TRP 36 4.343 12.719 23.304 1.00 0.00 N ATOM 36 CA TRP 36 3.174 12.046 23.890 1.00 0.00 C ATOM 36 C TRP 36 1.948 12.829 23.414 1.00 0.00 C ATOM 36 O TRP 36 0.811 12.336 23.417 1.00 0.00 O ATOM 36 CB TRP 36 3.255 12.139 25.424 1.00 0.00 C ATOM 37 N ALA 37 2.220 14.056 23.009 1.00 0.00 N ATOM 37 CA ALA 37 1.191 14.981 22.512 1.00 0.00 C ATOM 37 C ALA 37 0.553 14.237 21.337 1.00 0.00 C ATOM 37 O ALA 37 -0.478 14.647 20.782 1.00 0.00 O ATOM 37 CB ALA 37 1.847 16.272 21.985 1.00 0.00 C ATOM 38 N GLU 38 1.197 13.142 20.982 1.00 0.00 N ATOM 38 CA GLU 38 0.758 12.277 19.878 1.00 0.00 C ATOM 38 C GLU 38 0.948 13.008 18.545 1.00 0.00 C ATOM 38 O GLU 38 0.085 12.991 17.658 1.00 0.00 O ATOM 38 CB GLU 38 -0.752 12.033 20.057 1.00 0.00 C ATOM 39 N GLU 39 2.099 13.646 18.439 1.00 0.00 N ATOM 39 CA GLU 39 2.487 14.412 17.243 1.00 0.00 C ATOM 39 C GLU 39 3.832 13.868 16.760 1.00 0.00 C ATOM 39 O GLU 39 4.893 14.129 17.343 1.00 0.00 O ATOM 39 CB GLU 39 2.651 15.875 17.689 1.00 0.00 C ATOM 40 N ARG 40 3.753 13.110 15.682 1.00 0.00 N ATOM 40 CA ARG 40 4.924 12.486 15.050 1.00 0.00 C ATOM 40 C ARG 40 5.611 13.559 14.203 1.00 0.00 C ATOM 40 O ARG 40 6.731 13.382 13.700 1.00 0.00 O ATOM 40 CB ARG 40 4.435 11.362 14.119 1.00 0.00 C ATOM 41 N ASP 41 4.906 14.666 14.062 1.00 0.00 N ATOM 41 CA ASP 41 5.378 15.823 13.287 1.00 0.00 C ATOM 41 C ASP 41 6.187 16.778 14.169 1.00 0.00 C ATOM 41 O ASP 41 7.134 17.440 13.721 1.00 0.00 O ATOM 41 CB ASP 41 4.134 16.574 12.779 1.00 0.00 C ATOM 42 N ILE 42 5.783 16.823 15.424 1.00 0.00 N ATOM 42 CA ILE 42 6.420 17.674 16.441 1.00 0.00 C ATOM 42 C ILE 42 7.598 16.945 17.090 1.00 0.00 C ATOM 42 O ILE 42 8.481 17.548 17.714 1.00 0.00 O ATOM 42 CB ILE 42 5.398 18.010 17.543 1.00 0.00 C ATOM 43 N THR 43 7.579 15.636 16.922 1.00 0.00 N ATOM 43 CA THR 43 8.615 14.742 17.463 1.00 0.00 C ATOM 43 C THR 43 9.818 14.709 16.516 1.00 0.00 C ATOM 43 O THR 43 10.973 14.533 16.929 1.00 0.00 O ATOM 43 CB THR 43 8.035 13.321 17.565 1.00 0.00 C ATOM 44 N ALA 44 9.508 14.882 15.245 1.00 0.00 N ATOM 44 CA ALA 44 10.511 14.886 14.168 1.00 0.00 C ATOM 44 C ALA 44 11.160 16.271 14.167 1.00 0.00 C ATOM 44 O ALA 44 12.316 16.455 13.758 1.00 0.00 O ATOM 44 CB ALA 44 9.812 14.698 12.811 1.00 0.00 C ATOM 45 N MET 45 10.382 17.231 14.634 1.00 0.00 N ATOM 45 CA MET 45 10.807 18.635 14.721 1.00 0.00 C ATOM 45 C MET 45 11.759 18.773 15.913 1.00 0.00 C ATOM 45 O MET 45 12.479 19.769 16.066 1.00 0.00 O ATOM 45 CB MET 45 9.565 19.503 14.991 1.00 0.00 C ATOM 46 N ARG 46 11.737 17.746 16.741 1.00 0.00 N ATOM 46 CA ARG 46 12.573 17.672 17.949 1.00 0.00 C ATOM 46 C ARG 46 13.932 17.028 17.663 1.00 0.00 C ATOM 46 O ARG 46 14.955 17.353 18.282 1.00 0.00 O ATOM 46 CB ARG 46 11.861 16.757 18.963 1.00 0.00 C ATOM 47 N GLU 47 13.905 16.111 16.714 1.00 0.00 N ATOM 47 CA GLU 47 15.099 15.368 16.281 1.00 0.00 C ATOM 47 C GLU 47 15.964 16.255 15.381 1.00 0.00 C ATOM 47 O GLU 47 17.193 16.118 15.310 1.00 0.00 O ATOM 47 CB GLU 47 14.657 14.155 15.446 1.00 0.00 C ATOM 48 N LEU 48 15.282 17.160 14.703 1.00 0.00 N ATOM 48 CA LEU 48 15.916 18.115 13.781 1.00 0.00 C ATOM 48 C LEU 48 16.390 19.348 14.554 1.00 0.00 C ATOM 48 O LEU 48 17.301 20.075 14.135 1.00 0.00 O ATOM 48 CB LEU 48 14.851 18.578 12.771 1.00 0.00 C ATOM 49 N THR 49 15.746 19.555 15.686 1.00 0.00 N ATOM 49 CA THR 49 16.042 20.682 16.585 1.00 0.00 C ATOM 49 C THR 49 17.242 20.364 17.479 1.00 0.00 C ATOM 49 O THR 49 18.019 21.245 17.873 1.00 0.00 O ATOM 49 CB THR 49 14.821 20.841 17.507 1.00 0.00 C ATOM 50 N GLY 50 17.361 19.085 17.781 1.00 0.00 N ATOM 50 CA GLY 50 18.443 18.560 18.628 1.00 0.00 C ATOM 50 C GLY 50 19.739 18.412 17.829 1.00 0.00 C ATOM 50 O GLY 50 20.842 18.292 18.382 1.00 0.00 O ATOM 51 N TRP 51 19.569 18.426 16.520 1.00 0.00 N ATOM 51 CA TRP 51 20.680 18.297 15.566 1.00 0.00 C ATOM 51 C TRP 51 21.277 19.676 15.277 1.00 0.00 C ATOM 51 O TRP 51 22.489 19.839 15.077 1.00 0.00 O ATOM 51 CB TRP 51 20.122 17.742 14.242 1.00 0.00 C ATOM 52 N LYS 52 20.391 20.655 15.263 1.00 0.00 N ATOM 52 CA LYS 52 20.749 22.057 15.006 1.00 0.00 C ATOM 52 C LYS 52 20.924 22.891 16.279 1.00 0.00 C ATOM 52 O LYS 52 21.835 23.722 16.398 1.00 0.00 O ATOM 52 CB LYS 52 19.572 22.700 14.250 1.00 0.00 C ATOM 53 N LEU 53 20.028 22.642 17.215 1.00 0.00 N ATOM 53 CA LEU 53 20.012 23.330 18.516 1.00 0.00 C ATOM 53 C LEU 53 20.990 22.620 19.454 1.00 0.00 C ATOM 53 O LEU 53 21.558 23.213 20.382 1.00 0.00 O ATOM 53 CB LEU 53 18.606 23.194 19.128 1.00 0.00 C ATOM 54 N ASP 54 21.162 21.340 19.181 1.00 0.00 N ATOM 54 CA ASP 54 22.058 20.469 19.957 1.00 0.00 C ATOM 54 C ASP 54 23.503 20.809 19.586 1.00 0.00 C ATOM 54 O ASP 54 24.458 20.510 20.319 1.00 0.00 O ATOM 54 CB ASP 54 21.772 19.011 19.560 1.00 0.00 C ATOM 55 N GLU 55 23.629 21.438 18.433 1.00 0.00 N ATOM 55 CA GLU 55 24.929 21.858 17.886 1.00 0.00 C ATOM 55 C GLU 55 25.277 23.265 18.381 1.00 0.00 C ATOM 55 O GLU 55 26.425 23.572 18.730 1.00 0.00 O ATOM 55 CB GLU 55 24.795 21.939 16.353 1.00 0.00 C ATOM 56 N TYR 56 24.253 24.098 18.397 1.00 0.00 N ATOM 56 CA TYR 56 24.365 25.498 18.837 1.00 0.00 C ATOM 56 C TYR 56 23.892 25.607 20.288 1.00 0.00 C ATOM 56 O TYR 56 24.425 26.381 21.096 1.00 0.00 O ATOM 56 CB TYR 56 23.415 26.338 17.965 1.00 0.00 C ATOM 57 N GLU 57 22.882 24.811 20.586 1.00 0.00 N ATOM 57 CA GLU 57 22.273 24.756 21.922 1.00 0.00 C ATOM 57 C GLU 57 23.105 23.790 22.769 1.00 0.00 C ATOM 57 O GLU 57 23.012 23.751 24.003 1.00 0.00 O ATOM 57 CB GLU 57 20.852 24.179 21.788 1.00 0.00 C ATOM 58 N THR 58 23.914 23.019 22.066 1.00 0.00 N ATOM 58 CA THR 58 24.802 22.020 22.679 1.00 0.00 C ATOM 58 C THR 58 26.124 22.676 23.087 1.00 0.00 C ATOM 58 O THR 58 26.837 22.211 23.986 1.00 0.00 O ATOM 58 CB THR 58 25.102 20.950 21.612 1.00 0.00 C ATOM 59 N PHE 59 26.420 23.763 22.400 1.00 0.00 N ATOM 59 CA PHE 59 27.641 24.550 22.629 1.00 0.00 C ATOM 59 C PHE 59 27.407 25.593 23.725 1.00 0.00 C ATOM 59 O PHE 59 28.322 25.992 24.459 1.00 0.00 O ATOM 59 CB PHE 59 27.981 25.296 21.326 1.00 0.00 C ATOM 60 N ARG 60 26.159 26.015 23.809 1.00 0.00 N ATOM 60 CA ARG 60 25.714 27.016 24.791 1.00 0.00 C ATOM 60 C ARG 60 25.581 26.326 26.151 1.00 0.00 C ATOM 60 O ARG 60 25.437 26.968 27.201 1.00 0.00 O ATOM 60 CB ARG 60 24.329 27.535 24.369 1.00 0.00 C ATOM 61 N ARG 61 25.636 25.009 26.094 1.00 0.00 N ATOM 61 CA ARG 61 25.530 24.148 27.282 1.00 0.00 C ATOM 61 C ARG 61 26.927 23.964 27.876 1.00 0.00 C ATOM 61 O ARG 61 27.104 23.475 29.002 1.00 0.00 O ATOM 61 CB ARG 61 25.018 22.763 26.851 1.00 0.00 C ATOM 62 N GLY 62 27.904 24.369 27.085 1.00 0.00 N ATOM 62 CA GLY 62 29.322 24.284 27.458 1.00 0.00 C ATOM 62 C GLY 62 29.962 25.666 27.622 1.00 0.00 C ATOM 62 O GLY 62 30.618 25.970 28.629 1.00 0.00 O ATOM 63 N SER 63 29.752 26.482 26.607 1.00 0.00 N ATOM 63 CA SER 63 30.276 27.856 26.558 1.00 0.00 C ATOM 63 C SER 63 29.440 28.729 27.497 1.00 0.00 C ATOM 63 O SER 63 28.262 29.018 27.248 1.00 0.00 O ATOM 63 CB SER 63 30.086 28.384 25.125 1.00 0.00 C ATOM 64 N ASP 64 30.086 29.135 28.574 1.00 0.00 N ATOM 64 CA ASP 64 29.470 29.982 29.608 1.00 0.00 C ATOM 64 C ASP 64 28.425 29.106 30.301 1.00 0.00 C ATOM 64 O ASP 64 27.283 29.518 30.552 1.00 0.00 O ATOM 64 CB ASP 64 28.759 31.162 28.920 1.00 0.00 C ATOM 65 N VAL 65 28.855 27.894 30.598 1.00 0.00 N ATOM 65 CA VAL 65 28.016 26.890 31.267 1.00 0.00 C ATOM 65 C VAL 65 27.401 27.522 32.519 1.00 0.00 C ATOM 65 O VAL 65 26.621 26.901 33.252 1.00 0.00 O ATOM 65 CB VAL 65 28.909 25.713 31.697 1.00 0.00 C ATOM 66 N SER 66 27.776 28.770 32.733 1.00 0.00 N ATOM 66 CA SER 66 27.305 29.565 33.878 1.00 0.00 C ATOM 66 C SER 66 26.087 30.352 33.390 1.00 0.00 C ATOM 66 O SER 66 25.219 30.771 34.170 1.00 0.00 O ATOM 66 CB SER 66 28.414 30.562 34.256 1.00 0.00 C ATOM 67 N PRO 67 26.054 30.536 32.084 1.00 0.00 N ATOM 67 CA PRO 67 24.974 31.264 31.404 1.00 0.00 C ATOM 67 C PRO 67 23.603 30.604 31.585 1.00 0.00 C ATOM 67 O PRO 67 22.551 31.256 31.542 1.00 0.00 O ATOM 67 CB PRO 67 25.301 31.248 29.900 1.00 0.00 C ATOM 68 N ALA 68 23.654 29.301 31.786 1.00 0.00 N ATOM 68 CA ALA 68 22.455 28.471 31.984 1.00 0.00 C ATOM 68 C ALA 68 22.529 27.781 33.350 1.00 0.00 C ATOM 68 O ALA 68 23.178 26.742 33.524 1.00 0.00 O ATOM 68 CB ALA 68 22.452 27.365 30.914 1.00 0.00 C ATOM 69 N THR 69 21.849 28.391 34.302 1.00 0.00 N ATOM 69 CA THR 69 21.786 27.899 35.688 1.00 0.00 C ATOM 69 C THR 69 20.784 26.742 35.725 1.00 0.00 C ATOM 69 O THR 69 19.698 26.794 35.131 1.00 0.00 O ATOM 69 CB THR 69 21.254 29.034 36.578 1.00 0.00 C ATOM 70 N LEU 70 21.185 25.705 36.437 1.00 0.00 N ATOM 70 CA LEU 70 20.378 24.487 36.605 1.00 0.00 C ATOM 70 C LEU 70 19.023 25.015 37.081 1.00 0.00 C ATOM 70 O LEU 70 17.998 24.319 37.046 1.00 0.00 O ATOM 70 CB LEU 70 20.990 23.589 37.696 1.00 0.00 C ATOM 71 N ASN 71 19.057 26.258 37.526 1.00 0.00 N ATOM 71 CA ASN 71 17.869 26.960 38.031 1.00 0.00 C ATOM 71 C ASN 71 17.800 28.283 37.264 1.00 0.00 C ATOM 71 O ASN 71 18.541 29.239 37.537 1.00 0.00 O ATOM 71 CB ASN 71 18.080 27.282 39.522 1.00 0.00 C ATOM 72 N GLY 72 16.893 28.302 36.306 1.00 0.00 N ATOM 72 CA GLY 72 16.660 29.472 35.446 1.00 0.00 C ATOM 72 C GLY 72 16.018 29.069 34.116 1.00 0.00 C ATOM 72 O GLY 72 14.797 28.897 34.002 1.00 0.00 O ATOM 73 N GLU 73 16.877 28.926 33.125 1.00 0.00 N ATOM 73 CA GLU 73 16.474 28.542 31.761 1.00 0.00 C ATOM 73 C GLU 73 15.846 27.146 31.784 1.00 0.00 C ATOM 73 O GLU 73 15.027 26.781 30.928 1.00 0.00 O ATOM 73 CB GLU 73 17.746 28.451 30.899 1.00 0.00 C ATOM 74 N MET 74 16.254 26.389 32.785 1.00 0.00 N ATOM 74 CA MET 74 15.778 25.013 32.996 1.00 0.00 C ATOM 74 C MET 74 14.405 25.037 33.674 1.00 0.00 C ATOM 74 O MET 74 13.733 24.008 33.832 1.00 0.00 O ATOM 74 CB MET 74 16.790 24.299 33.906 1.00 0.00 C ATOM 75 N GLN 75 14.017 26.237 34.064 1.00 0.00 N ATOM 75 CA GLN 75 12.732 26.486 34.737 1.00 0.00 C ATOM 75 C GLN 75 11.632 26.820 33.726 1.00 0.00 C ATOM 75 O GLN 75 10.446 26.528 33.928 1.00 0.00 O ATOM 75 CB GLN 75 12.898 27.711 35.655 1.00 0.00 C ATOM 76 N THR 76 12.065 27.435 32.641 1.00 0.00 N ATOM 76 CA THR 76 11.178 27.846 31.543 1.00 0.00 C ATOM 76 C THR 76 10.830 26.653 30.651 1.00 0.00 C ATOM 76 O THR 76 9.791 26.619 29.975 1.00 0.00 O ATOM 76 CB THR 76 11.924 28.887 30.690 1.00 0.00 C ATOM 77 N LEU 77 11.726 25.685 30.675 1.00 0.00 N ATOM 77 CA LEU 77 11.589 24.447 29.893 1.00 0.00 C ATOM 77 C LEU 77 10.711 23.447 30.649 1.00 0.00 C ATOM 77 O LEU 77 10.169 22.489 30.080 1.00 0.00 O ATOM 77 CB LEU 77 12.976 23.812 29.683 1.00 0.00 C ATOM 78 N LYS 78 10.595 23.702 31.939 1.00 0.00 N ATOM 78 CA LYS 78 9.799 22.868 32.852 1.00 0.00 C ATOM 78 C LYS 78 8.338 23.327 32.831 1.00 0.00 C ATOM 78 O LYS 78 7.403 22.550 33.070 1.00 0.00 O ATOM 78 CB LYS 78 10.315 23.058 34.289 1.00 0.00 C ATOM 79 N ASN 79 8.180 24.604 32.537 1.00 0.00 N ATOM 79 CA ASN 79 6.862 25.252 32.462 1.00 0.00 C ATOM 79 C ASN 79 6.200 24.955 31.114 1.00 0.00 C ATOM 79 O ASN 79 4.971 24.983 30.965 1.00 0.00 O ATOM 79 CB ASN 79 7.076 26.772 32.563 1.00 0.00 C ATOM 80 N TRP 80 7.052 24.671 30.147 1.00 0.00 N ATOM 80 CA TRP 80 6.630 24.355 28.772 1.00 0.00 C ATOM 80 C TRP 80 6.203 22.889 28.680 1.00 0.00 C ATOM 80 O TRP 80 5.419 22.487 27.809 1.00 0.00 O ATOM 80 CB TRP 80 7.849 24.535 27.852 1.00 0.00 C ATOM 81 N LEU 81 6.741 22.111 29.601 1.00 0.00 N ATOM 81 CA LEU 81 6.467 20.669 29.695 1.00 0.00 C ATOM 81 C LEU 81 5.140 20.403 30.410 1.00 0.00 C ATOM 81 O LEU 81 4.501 19.356 30.237 1.00 0.00 O ATOM 81 CB LEU 81 7.603 20.036 30.517 1.00 0.00 C ATOM 82 N GLU 82 4.753 21.377 31.211 1.00 0.00 N ATOM 82 CA GLU 82 3.510 21.328 31.995 1.00 0.00 C ATOM 82 C GLU 82 2.321 21.824 31.168 1.00 0.00 C ATOM 82 O GLU 82 1.170 21.406 31.359 1.00 0.00 O ATOM 82 CB GLU 82 3.671 22.265 33.204 1.00 0.00 C ATOM 83 N TYR 83 2.639 22.719 30.253 1.00 0.00 N ATOM 83 CA TYR 83 1.651 23.327 29.349 1.00 0.00 C ATOM 83 C TYR 83 1.321 22.367 28.203 1.00 0.00 C ATOM 83 O TYR 83 0.233 22.402 27.610 1.00 0.00 O ATOM 83 CB TYR 83 2.261 24.606 28.752 1.00 0.00 C ATOM 84 N LEU 84 2.290 21.519 27.918 1.00 0.00 N ATOM 84 CA LEU 84 2.185 20.510 26.852 1.00 0.00 C ATOM 84 C LEU 84 1.420 19.293 27.375 1.00 0.00 C ATOM 84 O LEU 84 0.824 18.516 26.615 1.00 0.00 O ATOM 84 CB LEU 84 3.601 20.072 26.437 1.00 0.00 C ATOM 85 N ALA 85 1.458 19.154 28.687 1.00 0.00 N ATOM 85 CA ALA 85 0.790 18.053 29.399 1.00 0.00 C ATOM 85 C ALA 85 -0.662 18.448 29.671 1.00 0.00 C ATOM 85 O ALA 85 -1.573 17.609 29.719 1.00 0.00 O ATOM 85 CB ALA 85 1.498 17.859 30.751 1.00 0.00 C ATOM 86 N ARG 86 -0.843 19.745 29.845 1.00 0.00 N ATOM 86 CA ARG 86 -2.160 20.341 30.118 1.00 0.00 C ATOM 86 C ARG 86 -2.941 20.366 28.801 1.00 0.00 C ATOM 86 O ARG 86 -4.160 20.580 28.766 1.00 0.00 O ATOM 86 CB ARG 86 -1.950 21.788 30.594 1.00 0.00 C ATOM 87 N ILE 87 -2.201 20.141 27.732 1.00 0.00 N ATOM 87 CA ILE 87 -2.750 20.119 26.366 1.00 0.00 C ATOM 87 C ILE 87 -3.424 18.764 26.135 1.00 0.00 C ATOM 87 O ILE 87 -4.368 18.627 25.345 1.00 0.00 O ATOM 87 CB ILE 87 -1.567 20.225 25.387 1.00 0.00 C ATOM 88 N ASP 88 -2.912 17.778 26.848 1.00 0.00 N ATOM 88 CA ASP 88 -3.408 16.395 26.779 1.00 0.00 C ATOM 88 C ASP 88 -4.622 16.268 27.703 1.00 0.00 C ATOM 88 O ASP 88 -5.461 15.367 27.564 1.00 0.00 O ATOM 88 CB ASP 88 -2.301 15.473 27.319 1.00 0.00 C ATOM 89 N VAL 89 -4.684 17.195 28.641 1.00 0.00 N ATOM 89 CA VAL 89 -5.765 17.260 29.635 1.00 0.00 C ATOM 89 C VAL 89 -7.024 17.827 28.972 1.00 0.00 C ATOM 89 O VAL 89 -8.159 17.589 29.407 1.00 0.00 O ATOM 89 CB VAL 89 -5.326 18.216 30.758 1.00 0.00 C ATOM 90 N VAL 90 -6.783 18.577 27.912 1.00 0.00 N ATOM 90 CA VAL 90 -7.847 19.220 27.125 1.00 0.00 C ATOM 90 C VAL 90 -8.509 18.125 26.286 1.00 0.00 C ATOM 90 O VAL 90 -9.693 18.198 25.925 1.00 0.00 O ATOM 90 CB VAL 90 -7.215 20.235 26.158 1.00 0.00 C ATOM 91 N ASP 91 -7.709 17.117 25.991 1.00 0.00 N ATOM 91 CA ASP 91 -8.140 15.959 25.194 1.00 0.00 C ATOM 91 C ASP 91 -8.774 16.476 23.900 1.00 0.00 C ATOM 91 O ASP 91 -9.649 15.839 23.297 1.00 0.00 O ATOM 91 CB ASP 91 -9.207 15.197 26.003 1.00 0.00 C ATOM 92 N GLU 92 -8.305 17.643 23.499 1.00 0.00 N ATOM 92 CA GLU 92 -8.775 18.322 22.281 1.00 0.00 C ATOM 92 C GLU 92 -7.539 18.642 21.435 1.00 0.00 C ATOM 92 O GLU 92 -6.763 19.561 21.729 1.00 0.00 O ATOM 92 CB GLU 92 -9.462 19.641 22.677 1.00 0.00 C ATOM 93 N ASP 93 -7.389 17.859 20.384 1.00 0.00 N ATOM 93 CA ASP 93 -6.271 17.991 19.437 1.00 0.00 C ATOM 93 C ASP 93 -6.702 18.993 18.362 1.00 0.00 C ATOM 93 O ASP 93 -7.562 18.717 17.515 1.00 0.00 O ATOM 93 CB ASP 93 -6.025 16.629 18.765 1.00 0.00 C ATOM 94 N LEU 94 -6.077 20.153 18.426 1.00 0.00 N ATOM 94 CA LEU 94 -6.337 21.258 17.489 1.00 0.00 C ATOM 94 C LEU 94 -5.426 22.408 17.924 1.00 0.00 C ATOM 94 O LEU 94 -4.237 22.470 17.579 1.00 0.00 O ATOM 94 CB LEU 94 -7.806 21.692 17.666 1.00 0.00 C ATOM 95 N PRO 95 -6.022 23.306 18.686 1.00 0.00 N ATOM 95 CA PRO 95 -5.332 24.491 19.215 1.00 0.00 C ATOM 95 C PRO 95 -4.160 23.978 20.055 1.00 0.00 C ATOM 95 O PRO 95 -3.295 24.740 20.509 1.00 0.00 O ATOM 95 CB PRO 95 -6.306 25.249 20.133 1.00 0.00 C ATOM 96 N GLU 96 -4.162 22.671 20.240 1.00 0.00 N ATOM 96 CA GLU 96 -3.128 21.969 21.016 1.00 0.00 C ATOM 96 C GLU 96 -1.929 21.656 20.118 1.00 0.00 C ATOM 96 O GLU 96 -0.772 21.613 20.559 1.00 0.00 O ATOM 96 CB GLU 96 -3.703 20.619 21.483 1.00 0.00 C ATOM 97 N LYS 97 -2.244 21.440 18.854 1.00 0.00 N ATOM 97 CA LYS 97 -1.247 21.123 17.821 1.00 0.00 C ATOM 97 C LYS 97 -0.520 22.414 17.438 1.00 0.00 C ATOM 97 O LYS 97 0.569 22.404 16.847 1.00 0.00 O ATOM 97 CB LYS 97 -2.012 20.603 16.592 1.00 0.00 C ATOM 98 N VAL 98 -1.157 23.515 17.795 1.00 0.00 N ATOM 98 CA VAL 98 -0.637 24.864 17.525 1.00 0.00 C ATOM 98 C VAL 98 0.129 25.526 18.676 1.00 0.00 C ATOM 98 O VAL 98 1.038 26.341 18.474 1.00 0.00 O ATOM 98 CB VAL 98 -1.867 25.746 17.247 1.00 0.00 C ATOM 99 N HIS 99 -0.267 25.150 19.877 1.00 0.00 N ATOM 99 CA HIS 99 0.333 25.662 21.120 1.00 0.00 C ATOM 99 C HIS 99 1.713 25.094 21.456 1.00 0.00 C ATOM 99 O HIS 99 2.599 25.787 21.975 1.00 0.00 O ATOM 99 CB HIS 99 -0.589 25.256 22.281 1.00 0.00 C ATOM 100 N VAL 100 1.862 23.821 21.145 1.00 0.00 1 ATOM 100 CA VAL 100 3.109 23.076 21.382 1.00 0.00 1 ATOM 100 C VAL 100 4.112 23.552 20.329 1.00 0.00 1 ATOM 100 O VAL 100 5.324 23.650 20.574 1.00 0.00 1 ATOM 100 CB VAL 100 2.871 21.568 21.197 1.00 0.00 1 ATOM 101 N PRO 101 3.570 23.839 19.161 1.00 0.00 1 ATOM 101 CA PRO 101 4.352 24.314 18.010 1.00 0.00 1 ATOM 101 C PRO 101 4.958 25.663 18.405 1.00 0.00 1 ATOM 101 O PRO 101 5.975 26.111 17.857 1.00 0.00 1 ATOM 101 CB PRO 101 3.391 24.547 16.830 1.00 0.00 1 TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 501 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 63.52 69.3 199 99.5 200 ARMSMC SECONDARY STRUCTURE . . 43.80 82.0 128 100.0 128 ARMSMC SURFACE . . . . . . . . 67.93 63.8 127 99.2 128 ARMSMC BURIED . . . . . . . . 54.87 79.2 72 100.0 72 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 89 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 83 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 56 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 57 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 32 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 72 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 57 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 50 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 46 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 26 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 31 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 29 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 23 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 25 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 16 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 16 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 13 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 14 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 13.84 (Number of atoms: 101) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 13.84 101 100.0 101 CRMSCA CRN = ALL/NP . . . . . 0.1370 CRMSCA SECONDARY STRUCTURE . . 13.06 64 100.0 64 CRMSCA SURFACE . . . . . . . . 14.64 65 100.0 65 CRMSCA BURIED . . . . . . . . 12.26 36 100.0 36 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 13.89 501 99.8 502 CRMSMC SECONDARY STRUCTURE . . 13.12 318 100.0 318 CRMSMC SURFACE . . . . . . . . 14.65 321 99.7 322 CRMSMC BURIED . . . . . . . . 12.41 180 100.0 180 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 14.25 98 22.3 439 CRMSSC RELIABLE SIDE CHAINS . 14.25 98 25.3 387 CRMSSC SECONDARY STRUCTURE . . 13.55 62 20.2 307 CRMSSC SURFACE . . . . . . . . 15.31 62 22.3 278 CRMSSC BURIED . . . . . . . . 12.20 36 22.4 161 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 13.89 501 59.4 843 CRMSALL SECONDARY STRUCTURE . . 13.12 318 56.5 563 CRMSALL SURFACE . . . . . . . . 14.65 321 59.7 538 CRMSALL BURIED . . . . . . . . 12.41 180 59.0 305 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 13.341 1.000 0.500 101 100.0 101 ERRCA SECONDARY STRUCTURE . . 12.608 1.000 0.500 64 100.0 64 ERRCA SURFACE . . . . . . . . 14.209 1.000 0.500 65 100.0 65 ERRCA BURIED . . . . . . . . 11.775 1.000 0.500 36 100.0 36 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 13.377 1.000 0.500 501 99.8 502 ERRMC SECONDARY STRUCTURE . . 12.654 1.000 0.500 318 100.0 318 ERRMC SURFACE . . . . . . . . 14.193 1.000 0.500 321 99.7 322 ERRMC BURIED . . . . . . . . 11.922 1.000 0.500 180 100.0 180 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 13.579 1.000 0.500 98 22.3 439 ERRSC RELIABLE SIDE CHAINS . 13.579 1.000 0.500 98 25.3 387 ERRSC SECONDARY STRUCTURE . . 12.931 1.000 0.500 62 20.2 307 ERRSC SURFACE . . . . . . . . 14.761 1.000 0.500 62 22.3 278 ERRSC BURIED . . . . . . . . 11.544 1.000 0.500 36 22.4 161 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 13.377 1.000 0.500 501 59.4 843 ERRALL SECONDARY STRUCTURE . . 12.654 1.000 0.500 318 56.5 563 ERRALL SURFACE . . . . . . . . 14.193 1.000 0.500 321 59.7 538 ERRALL BURIED . . . . . . . . 11.922 1.000 0.500 180 59.0 305 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 0 17 101 101 DISTCA CA (P) 0.00 0.00 0.00 0.00 16.83 101 DISTCA CA (RMS) 0.00 0.00 0.00 0.00 8.18 DISTCA ALL (N) 0 0 0 2 91 501 843 DISTALL ALL (P) 0.00 0.00 0.00 0.24 10.79 843 DISTALL ALL (RMS) 0.00 0.00 0.00 4.61 8.32 DISTALL END of the results output