####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 78 ( 312), selected 68 , name T0618AL396_1-D1 # Molecule2: number of CA atoms 158 ( 1266), selected 68 , name T0618-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0618AL396_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 155 - 175 4.50 19.24 LCS_AVERAGE: 11.95 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 133 - 146 1.99 21.66 LONGEST_CONTINUOUS_SEGMENT: 14 158 - 171 1.92 22.68 LCS_AVERAGE: 5.70 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 134 - 146 0.51 22.82 LCS_AVERAGE: 4.64 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 68 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT I 108 I 108 3 3 11 3 3 3 3 3 3 4 5 7 7 18 19 20 20 22 24 25 30 30 31 LCS_GDT K 109 K 109 3 3 12 3 3 3 3 3 4 4 5 7 7 10 10 20 20 22 24 25 30 30 31 LCS_GDT K 110 K 110 3 3 13 3 3 3 4 4 6 6 7 9 15 18 19 21 22 24 26 29 30 31 32 LCS_GDT N 111 N 111 3 3 13 3 3 3 4 4 6 6 7 9 9 14 16 20 22 24 26 28 30 31 32 LCS_GDT I 112 I 112 3 4 13 3 3 3 4 4 4 5 6 9 9 12 13 14 15 15 15 24 27 29 30 LCS_GDT S 113 S 113 3 4 13 3 3 3 3 4 5 6 7 9 9 12 13 14 15 15 15 24 25 29 31 LCS_GDT E 114 E 114 4 5 13 3 4 4 4 4 5 6 7 9 15 18 19 21 22 24 26 29 30 31 32 LCS_GDT D 115 D 115 4 5 13 3 4 4 4 4 6 6 7 9 9 12 13 14 16 22 25 25 27 30 31 LCS_GDT L 116 L 116 4 5 13 3 4 4 4 4 6 6 7 9 12 15 19 21 22 24 25 27 30 31 31 LCS_GDT A 117 A 117 4 5 13 3 4 4 12 13 13 15 15 17 19 20 20 22 24 25 26 29 30 31 33 LCS_GDT D 118 D 118 3 5 13 0 3 3 3 4 6 8 14 16 17 18 20 22 24 25 26 29 30 31 33 LCS_GDT I 119 I 119 3 4 13 0 3 3 4 4 6 8 11 13 15 18 20 22 24 25 26 29 30 31 33 LCS_GDT Y 120 Y 120 3 4 18 3 3 3 3 4 7 9 11 12 15 16 18 19 24 25 26 29 30 31 33 LCS_GDT Q 121 Q 121 3 4 18 3 3 3 3 3 4 6 9 10 11 13 16 18 19 21 25 26 27 30 33 LCS_GDT D 122 D 122 3 4 19 3 3 3 3 3 4 5 6 10 12 12 14 17 18 21 22 23 24 27 28 LCS_GDT I 123 I 123 5 5 19 4 5 5 5 5 7 9 12 17 19 20 20 22 24 25 26 29 30 31 33 LCS_GDT K 124 K 124 5 5 19 4 5 5 5 5 9 13 15 17 19 20 20 22 24 25 26 29 30 31 33 LCS_GDT D 125 D 125 5 5 19 4 5 5 5 5 6 7 9 16 19 20 20 22 24 25 26 29 30 31 32 LCS_GDT F 126 F 126 5 5 19 4 5 5 5 5 6 8 11 12 14 15 16 22 24 25 25 29 30 31 32 LCS_GDT I 127 I 127 5 5 19 3 5 5 5 5 10 12 13 15 17 18 20 21 24 25 25 28 30 30 32 LCS_GDT F 128 F 128 4 4 20 3 4 5 5 5 7 9 11 13 15 17 19 20 23 25 25 27 28 30 33 LCS_GDT V 129 V 129 4 4 20 3 4 5 5 5 7 9 11 13 15 17 18 19 21 22 25 26 27 30 33 LCS_GDT F 130 F 130 4 4 20 3 4 5 5 5 6 8 11 12 15 17 18 19 21 22 25 26 27 30 33 LCS_GDT Q 131 Q 131 4 4 20 3 4 4 4 5 7 9 11 13 17 17 18 19 21 22 25 26 27 30 33 LCS_GDT L 132 L 132 4 4 20 3 4 4 4 4 6 8 11 13 17 17 18 19 21 21 24 26 27 30 33 LCS_GDT G 133 G 133 4 14 20 3 4 5 5 5 9 10 14 14 17 17 18 19 21 22 25 26 27 30 33 LCS_GDT L 134 L 134 13 14 20 4 13 13 13 13 13 13 14 14 17 17 18 19 20 21 23 24 27 28 29 LCS_GDT N 135 N 135 13 14 20 10 13 13 13 13 13 13 14 14 17 17 18 19 20 21 24 25 27 30 33 LCS_GDT E 136 E 136 13 14 20 10 13 13 13 13 13 13 14 14 17 17 18 19 21 22 25 26 27 30 33 LCS_GDT T 137 T 137 13 14 20 4 13 13 13 13 13 13 14 14 17 17 18 19 21 22 25 26 27 30 33 LCS_GDT M 138 M 138 13 14 20 10 13 13 13 13 13 13 14 14 17 17 18 19 21 22 25 26 27 30 33 LCS_GDT N 139 N 139 13 14 20 10 13 13 13 13 13 13 14 14 17 17 18 19 21 22 25 26 27 30 33 LCS_GDT D 140 D 140 13 14 20 10 13 13 13 13 13 13 14 14 17 17 18 19 21 22 25 26 27 30 33 LCS_GDT S 141 S 141 13 14 20 10 13 13 13 13 13 13 14 14 17 17 18 19 21 22 25 26 27 30 33 LCS_GDT L 142 L 142 13 14 20 10 13 13 13 13 13 13 14 14 17 17 19 20 21 22 25 26 27 30 33 LCS_GDT A 143 A 143 13 14 20 10 13 13 13 13 13 13 14 14 17 17 19 20 21 22 25 26 27 30 33 LCS_GDT I 144 I 144 13 14 20 10 13 13 13 13 13 13 14 14 17 17 18 19 20 22 25 26 27 30 33 LCS_GDT C 145 C 145 13 14 20 10 13 13 13 13 13 13 14 14 17 17 19 20 20 21 22 23 27 28 32 LCS_GDT Q 146 Q 146 13 14 20 4 13 13 13 13 13 13 14 14 17 17 19 20 20 21 22 23 27 28 32 LCS_GDT E 147 E 147 3 4 20 3 3 3 4 5 7 10 12 14 17 17 19 20 21 22 25 26 27 30 33 LCS_GDT N 148 N 148 3 4 20 0 3 4 4 4 6 10 11 13 15 17 19 20 21 22 25 26 27 30 33 LCS_GDT F 149 F 149 3 10 20 0 3 4 8 9 9 10 12 13 15 17 19 20 21 22 25 26 27 30 33 LCS_GDT G 150 G 150 3 10 20 3 3 4 5 8 9 10 12 13 15 17 19 20 21 22 25 26 27 30 33 LCS_GDT L 151 L 151 7 10 20 3 3 7 8 9 9 10 12 13 15 17 19 20 20 21 22 23 26 28 31 LCS_GDT L 152 L 152 7 10 20 5 6 7 8 9 9 10 12 13 15 16 19 20 21 21 25 26 26 28 31 LCS_GDT W 153 W 153 7 10 20 5 6 7 8 9 9 10 12 13 15 17 19 20 21 22 25 26 27 30 33 LCS_GDT G 154 G 154 7 10 20 5 6 7 8 9 9 10 12 13 15 17 19 20 21 22 25 26 27 30 33 LCS_GDT Q 155 Q 155 7 10 21 5 6 7 8 9 9 10 12 13 15 18 19 20 24 25 25 28 28 31 32 LCS_GDT K 156 K 156 7 10 21 5 6 7 8 9 9 10 12 13 15 17 19 20 22 24 25 26 28 30 32 LCS_GDT L 157 L 157 7 10 21 3 6 7 8 9 9 10 12 13 15 18 20 22 24 25 26 29 30 31 33 LCS_GDT V 158 V 158 7 14 21 3 5 6 8 10 12 15 15 17 19 20 20 22 24 25 26 29 30 31 33 LCS_GDT N 159 N 159 12 14 21 10 11 12 12 13 13 14 15 17 17 20 20 22 24 25 26 29 30 31 33 LCS_GDT T 160 T 160 12 14 21 10 11 12 12 13 13 15 15 17 19 20 20 22 24 25 26 29 30 31 33 LCS_GDT M 161 M 161 12 14 21 10 11 12 12 13 13 15 15 17 19 20 20 22 24 25 26 29 30 31 33 LCS_GDT R 162 R 162 12 14 21 10 11 12 12 13 13 15 15 17 19 20 20 22 24 25 26 29 30 31 32 LCS_GDT A 163 A 163 12 14 21 10 11 12 12 13 13 15 15 17 19 20 20 22 24 25 26 29 30 31 32 LCS_GDT L 164 L 164 12 14 21 10 11 12 12 13 13 15 15 17 19 20 20 22 24 25 26 29 30 31 32 LCS_GDT H 165 H 165 12 14 21 10 11 12 12 13 13 15 15 17 19 20 20 22 24 25 26 29 30 31 32 LCS_GDT D 166 D 166 12 14 21 10 11 12 12 13 13 15 15 17 19 20 20 22 24 25 26 29 30 31 32 LCS_GDT V 167 V 167 12 14 21 10 11 12 12 13 13 15 15 17 19 20 20 22 24 25 26 29 30 31 32 LCS_GDT K 168 K 168 12 14 21 10 11 12 12 13 13 15 15 17 19 20 20 22 24 25 26 29 30 31 32 LCS_GDT Y 169 Y 169 12 14 21 9 11 12 12 13 13 15 15 17 19 20 20 22 24 25 26 29 30 31 32 LCS_GDT S 170 S 170 12 14 21 3 7 12 12 13 13 15 15 17 19 20 20 22 24 25 26 29 30 31 32 LCS_GDT P 171 P 171 4 14 21 3 5 6 6 10 12 14 15 17 19 20 20 22 24 25 26 29 30 31 32 LCS_GDT K 172 K 172 4 4 21 3 5 6 9 10 11 15 15 17 19 20 20 22 24 25 26 29 30 31 32 LCS_GDT A 173 A 173 4 4 21 3 3 4 4 4 4 6 14 15 17 18 20 22 24 25 26 29 30 31 32 LCS_GDT R 174 R 174 4 4 21 3 3 5 9 10 11 15 15 17 19 20 20 22 24 25 26 29 30 31 32 LCS_GDT L 175 L 175 3 4 21 0 3 3 4 6 7 9 12 14 15 18 20 22 24 25 26 29 30 31 32 LCS_AVERAGE LCS_A: 7.43 ( 4.64 5.70 11.95 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 13 13 13 13 13 15 15 17 19 20 20 22 24 25 26 29 30 31 33 GDT PERCENT_AT 6.33 8.23 8.23 8.23 8.23 8.23 9.49 9.49 10.76 12.03 12.66 12.66 13.92 15.19 15.82 16.46 18.35 18.99 19.62 20.89 GDT RMS_LOCAL 0.30 0.51 0.51 0.51 0.51 0.51 2.40 2.31 2.66 3.31 3.40 3.40 3.90 4.30 4.49 4.72 5.27 5.45 5.65 7.83 GDT RMS_ALL_AT 23.16 22.82 22.82 22.82 22.82 22.82 20.90 21.74 21.34 20.06 20.36 20.36 20.75 20.42 20.09 20.18 19.71 19.86 19.93 17.77 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA I 108 I 108 13.448 4 0.613 0.613 14.447 0.000 0.000 LGA K 109 K 109 13.699 5 0.600 0.600 13.699 0.000 0.000 LGA K 110 K 110 10.704 5 0.606 0.606 11.273 0.357 0.159 LGA N 111 N 111 7.345 4 0.607 0.607 9.465 6.071 3.036 LGA I 112 I 112 11.366 4 0.243 0.243 12.092 0.119 0.060 LGA S 113 S 113 10.782 2 0.265 0.265 10.782 0.119 0.079 LGA E 114 E 114 8.085 5 0.598 0.598 8.905 4.881 2.169 LGA D 115 D 115 12.689 4 0.061 0.061 12.689 0.000 0.000 LGA L 116 L 116 9.776 4 0.328 0.328 10.904 5.119 2.560 LGA A 117 A 117 2.671 1 0.608 0.608 5.452 36.667 29.333 LGA D 118 D 118 6.887 4 0.602 0.602 6.887 19.762 9.881 LGA I 119 I 119 6.660 4 0.594 0.594 8.945 9.881 4.940 LGA Y 120 Y 120 7.669 8 0.597 0.597 11.019 6.071 2.024 LGA Q 121 Q 121 14.637 5 0.042 0.042 15.816 0.000 0.000 LGA D 122 D 122 12.498 4 0.436 0.436 12.855 0.000 0.000 LGA I 123 I 123 8.123 4 0.208 0.208 10.073 5.238 2.619 LGA K 124 K 124 9.239 5 0.031 0.031 9.274 3.095 1.376 LGA D 125 D 125 6.567 4 0.166 0.166 8.976 8.571 4.286 LGA F 126 F 126 11.232 7 0.578 0.578 14.542 0.714 0.260 LGA I 127 I 127 15.416 4 0.079 0.079 19.503 0.000 0.000 LGA F 128 F 128 18.954 7 0.561 0.561 21.369 0.000 0.000 LGA V 129 V 129 22.046 3 0.575 0.575 25.818 0.000 0.000 LGA F 130 F 130 27.493 7 0.594 0.594 30.924 0.000 0.000 LGA Q 131 Q 131 31.858 5 0.130 0.130 35.811 0.000 0.000 LGA L 132 L 132 36.098 4 0.139 0.139 39.150 0.000 0.000 LGA G 133 G 133 37.411 0 0.135 0.135 39.203 0.000 0.000 LGA L 134 L 134 37.313 4 0.596 0.596 38.173 0.000 0.000 LGA N 135 N 135 41.056 4 0.067 0.067 41.056 0.000 0.000 LGA E 136 E 136 40.006 5 0.075 0.075 40.300 0.000 0.000 LGA T 137 T 137 34.836 3 0.129 0.129 36.610 0.000 0.000 LGA M 138 M 138 36.684 4 0.046 0.046 37.526 0.000 0.000 LGA N 139 N 139 39.931 4 0.023 0.023 39.931 0.000 0.000 LGA D 140 D 140 37.248 4 0.046 0.046 37.997 0.000 0.000 LGA S 141 S 141 34.049 2 0.021 0.021 35.132 0.000 0.000 LGA L 142 L 142 36.923 4 0.026 0.026 37.677 0.000 0.000 LGA A 143 A 143 39.677 1 0.015 0.015 39.677 0.000 0.000 LGA I 144 I 144 35.721 4 0.015 0.015 36.880 0.000 0.000 LGA C 145 C 145 33.565 2 0.138 0.138 34.620 0.000 0.000 LGA Q 146 Q 146 37.128 5 0.452 0.452 37.128 0.000 0.000 LGA E 147 E 147 35.975 5 0.586 0.586 36.228 0.000 0.000 LGA N 148 N 148 32.371 4 0.651 0.651 33.943 0.000 0.000 LGA F 149 F 149 27.519 7 0.571 0.571 29.593 0.000 0.000 LGA G 150 G 150 27.198 0 0.637 0.637 27.485 0.000 0.000 LGA L 151 L 151 25.307 4 0.065 0.065 26.597 0.000 0.000 LGA L 152 L 152 23.071 4 0.078 0.078 24.298 0.000 0.000 LGA W 153 W 153 21.260 10 0.042 0.042 22.605 0.000 0.000 LGA G 154 G 154 17.751 0 0.031 0.031 19.423 0.000 0.000 LGA Q 155 Q 155 12.980 5 0.157 0.157 15.167 0.000 0.000 LGA K 156 K 156 13.439 5 0.155 0.155 13.613 0.000 0.000 LGA L 157 L 157 10.130 4 0.582 0.582 11.488 1.905 0.952 LGA V 158 V 158 4.303 3 0.042 0.042 6.060 42.262 24.150 LGA N 159 N 159 2.884 4 0.590 0.590 2.884 64.881 32.440 LGA T 160 T 160 1.173 3 0.032 0.032 1.781 83.810 47.891 LGA M 161 M 161 1.418 4 0.019 0.019 1.418 81.429 40.714 LGA R 162 R 162 1.638 7 0.050 0.050 1.638 79.405 28.874 LGA A 163 A 163 0.940 1 0.046 0.046 1.125 90.595 72.476 LGA L 164 L 164 0.564 4 0.035 0.035 1.168 90.595 45.298 LGA H 165 H 165 0.792 6 0.041 0.041 0.792 92.857 37.143 LGA D 166 D 166 0.854 4 0.040 0.040 1.473 88.333 44.167 LGA V 167 V 167 1.938 3 0.023 0.023 2.352 70.952 40.544 LGA K 168 K 168 1.954 5 0.050 0.050 2.263 70.833 31.481 LGA Y 169 Y 169 1.742 8 0.124 0.124 2.048 70.833 23.611 LGA S 170 S 170 2.191 2 0.584 0.584 2.330 66.786 44.524 LGA P 171 P 171 4.674 3 0.612 0.612 4.674 37.381 21.361 LGA K 172 K 172 4.695 5 0.550 0.550 5.258 33.452 14.868 LGA A 173 A 173 7.005 1 0.351 0.351 7.005 15.357 12.286 LGA R 174 R 174 5.315 7 0.636 0.636 7.506 17.381 6.320 LGA L 175 L 175 11.771 4 0.675 0.675 14.274 0.119 0.060 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 68 272 272 100.00 549 272 49.54 158 SUMMARY(RMSD_GDC): 13.905 13.840 13.840 7.632 4.000 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 78 158 4.0 15 2.31 10.601 9.299 0.622 LGA_LOCAL RMSD: 2.310 Number of atoms: 15 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 21.743 Number of assigned atoms: 68 Std_ASGN_ATOMS RMSD: 13.905 Standard rmsd on all 68 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.581757 * X + 0.793595 * Y + -0.178232 * Z + 68.503876 Y_new = 0.813360 * X + 0.568188 * Y + -0.124930 * Z + 3.505961 Z_new = 0.002125 * X + -0.217646 * Y + -0.976025 * Z + 20.880989 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.191685 -0.002125 -2.922190 [DEG: 125.5743 -0.1218 -167.4292 ] ZXZ: -0.959439 2.922180 3.131828 [DEG: -54.9718 167.4286 179.4405 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0618AL396_1-D1 REMARK 2: T0618-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0618AL396_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 78 158 4.0 15 2.31 9.299 13.91 REMARK ---------------------------------------------------------- MOLECULE T0618AL396_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK Aligment from pdb entry: 2kci_A ATOM 1 N LEU 98 59.832 16.377 25.473 1.00 0.00 N ATOM 2 CA LEU 98 60.004 14.900 25.375 1.00 0.00 C ATOM 3 C LEU 98 59.779 14.462 23.922 1.00 0.00 C ATOM 4 O LEU 98 58.798 13.819 23.606 1.00 0.00 O ATOM 5 N PRO 99 60.683 14.818 23.044 1.00 0.00 N ATOM 6 CA PRO 99 60.586 14.467 21.599 1.00 0.00 C ATOM 7 C PRO 99 61.044 13.031 21.316 1.00 0.00 C ATOM 8 O PRO 99 62.203 12.690 21.460 1.00 0.00 O ATOM 9 N ASP 100 60.131 12.192 20.910 1.00 0.00 N ATOM 10 CA ASP 100 60.477 10.772 20.602 1.00 0.00 C ATOM 11 C ASP 100 60.580 10.584 19.085 1.00 0.00 C ATOM 12 O ASP 100 61.642 10.356 18.540 1.00 0.00 O ATOM 13 N MET 101 59.468 10.671 18.406 1.00 0.00 N ATOM 14 CA MET 101 59.463 10.494 16.922 1.00 0.00 C ATOM 15 C MET 101 60.262 11.618 16.257 1.00 0.00 C ATOM 16 O MET 101 61.003 11.398 15.319 1.00 0.00 O ATOM 17 N ALA 102 60.108 12.819 16.735 1.00 0.00 N ATOM 18 CA ALA 102 60.844 13.974 16.141 1.00 0.00 C ATOM 19 C ALA 102 62.352 13.793 16.345 1.00 0.00 C ATOM 20 O ALA 102 63.153 14.110 15.485 1.00 0.00 O ATOM 21 N TYR 103 62.741 13.298 17.483 1.00 0.00 N ATOM 22 CA TYR 103 64.193 13.096 17.765 1.00 0.00 C ATOM 23 C TYR 103 64.722 11.885 16.990 1.00 0.00 C ATOM 24 O TYR 103 65.811 11.903 16.460 1.00 0.00 O ATOM 25 N SER 104 63.960 10.826 16.944 1.00 0.00 N ATOM 26 CA SER 104 64.405 9.592 16.220 1.00 0.00 C ATOM 27 C SER 104 64.370 9.810 14.706 1.00 0.00 C ATOM 28 O SER 104 65.216 9.325 13.979 1.00 0.00 O ATOM 29 N ASP 105 63.379 10.511 14.237 1.00 0.00 N ATOM 30 CA ASP 105 63.231 10.764 12.769 1.00 0.00 C ATOM 31 C ASP 105 64.597 10.954 12.077 1.00 0.00 C ATOM 32 O ASP 105 64.943 10.203 11.184 1.00 0.00 O ATOM 33 N GLU 106 65.356 11.952 12.455 1.00 0.00 N ATOM 34 CA GLU 106 66.672 12.232 11.804 1.00 0.00 C ATOM 35 C GLU 106 67.611 11.019 11.854 1.00 0.00 C ATOM 36 O GLU 106 68.358 10.762 10.929 1.00 0.00 O ATOM 37 N PRO 107 67.579 10.281 12.925 1.00 0.00 N ATOM 38 CA PRO 107 68.473 9.092 13.031 1.00 0.00 C ATOM 39 C PRO 107 68.074 8.052 11.976 1.00 0.00 C ATOM 40 O PRO 107 68.904 7.508 11.273 1.00 0.00 O ATOM 41 N ILE 108 66.807 7.770 11.879 1.00 0.00 N ATOM 42 CA ILE 108 66.331 6.762 10.887 1.00 0.00 C ATOM 43 C ILE 108 66.395 7.340 9.468 1.00 0.00 C ATOM 44 O ILE 108 66.766 6.666 8.525 1.00 0.00 O ATOM 45 N LYS 109 66.013 8.576 9.311 1.00 0.00 N ATOM 46 CA LYS 109 66.022 9.204 7.956 1.00 0.00 C ATOM 47 C LYS 109 67.458 9.322 7.429 1.00 0.00 C ATOM 48 O LYS 109 67.728 9.086 6.267 1.00 0.00 O ATOM 49 N LYS 110 68.374 9.704 8.274 1.00 0.00 N ATOM 50 CA LYS 110 69.793 9.862 7.832 1.00 0.00 C ATOM 51 C LYS 110 70.423 8.498 7.521 1.00 0.00 C ATOM 52 O LYS 110 71.170 8.351 6.572 1.00 0.00 O ATOM 53 N ASN 111 70.140 7.508 8.317 1.00 0.00 N ATOM 54 CA ASN 111 70.735 6.155 8.080 1.00 0.00 C ATOM 55 C ASN 111 70.252 5.584 6.740 1.00 0.00 C ATOM 56 O ASN 111 71.019 5.024 5.979 1.00 0.00 O ATOM 57 N ILE 112 68.988 5.706 6.453 1.00 0.00 N ATOM 58 CA ILE 112 68.446 5.157 5.170 1.00 0.00 C ATOM 59 C ILE 112 68.457 6.257 4.099 1.00 0.00 C ATOM 60 O ILE 112 67.971 6.078 2.997 1.00 0.00 O ATOM 61 N SER 113 69.020 7.390 4.425 1.00 0.00 N ATOM 62 CA SER 113 69.090 8.526 3.451 1.00 0.00 C ATOM 63 C SER 113 67.697 8.816 2.889 1.00 0.00 C ATOM 64 O SER 113 67.538 9.538 1.922 1.00 0.00 O ATOM 65 N GLU 114 66.684 8.264 3.496 1.00 0.00 N ATOM 66 CA GLU 114 65.291 8.502 3.014 1.00 0.00 C ATOM 67 C GLU 114 64.654 9.643 3.814 1.00 0.00 C ATOM 68 O GLU 114 64.446 9.545 5.008 1.00 0.00 O ATOM 69 N ASP 115 64.343 10.721 3.149 1.00 0.00 N ATOM 70 CA ASP 115 63.716 11.887 3.839 1.00 0.00 C ATOM 71 C ASP 115 62.325 11.478 4.346 1.00 0.00 C ATOM 72 O ASP 115 61.884 11.892 5.401 1.00 0.00 O ATOM 73 N LEU 116 61.632 10.676 3.590 1.00 0.00 N ATOM 74 CA LEU 116 60.267 10.240 4.003 1.00 0.00 C ATOM 75 C LEU 116 60.337 9.444 5.313 1.00 0.00 C ATOM 76 O LEU 116 60.594 9.979 6.374 1.00 0.00 O ATOM 77 N ALA 117 60.100 8.164 5.225 1.00 0.00 N ATOM 78 CA ALA 117 60.131 7.285 6.425 1.00 0.00 C ATOM 79 C ALA 117 59.129 7.777 7.465 1.00 0.00 C ATOM 80 O ALA 117 59.134 8.923 7.870 1.00 0.00 O ATOM 81 N ASP 118 58.266 6.895 7.899 1.00 0.00 N ATOM 82 CA ASP 118 57.239 7.261 8.920 1.00 0.00 C ATOM 83 C ASP 118 57.382 6.335 10.125 1.00 0.00 C ATOM 84 O ASP 118 57.462 5.129 9.994 1.00 0.00 O ATOM 85 N ILE 119 57.411 6.904 11.300 1.00 0.00 N ATOM 86 CA ILE 119 57.551 6.091 12.545 1.00 0.00 C ATOM 87 C ILE 119 56.248 6.142 13.336 1.00 0.00 C ATOM 88 O ILE 119 55.643 7.185 13.499 1.00 0.00 O ATOM 89 N TYR 120 55.812 5.011 13.825 1.00 0.00 N ATOM 90 CA TYR 120 54.543 4.952 14.612 1.00 0.00 C ATOM 91 C TYR 120 54.773 4.161 15.900 1.00 0.00 C ATOM 92 O TYR 120 55.760 3.465 16.053 1.00 0.00 O ATOM 93 N GLN 121 53.861 4.271 16.827 1.00 0.00 N ATOM 94 CA GLN 121 53.993 3.534 18.119 1.00 0.00 C ATOM 95 C GLN 121 53.902 2.029 17.856 1.00 0.00 C ATOM 96 O GLN 121 54.596 1.234 18.460 1.00 0.00 O ATOM 97 N ASP 122 53.041 1.637 16.953 1.00 0.00 N ATOM 98 CA ASP 122 52.875 0.186 16.624 1.00 0.00 C ATOM 99 C ASP 122 53.539 -0.099 15.271 1.00 0.00 C ATOM 100 O ASP 122 52.974 -0.742 14.407 1.00 0.00 O ATOM 101 N ILE 123 57.453 -2.212 10.750 1.00 0.00 N ATOM 102 CA ILE 123 58.634 -2.208 9.829 1.00 0.00 C ATOM 103 C ILE 123 58.226 -2.770 8.462 1.00 0.00 C ATOM 104 O ILE 123 59.000 -2.782 7.523 1.00 0.00 O ATOM 105 N LYS 124 57.013 -3.229 8.352 1.00 0.00 N ATOM 106 CA LYS 124 56.525 -3.788 7.057 1.00 0.00 C ATOM 107 C LYS 124 56.460 -2.677 6.004 1.00 0.00 C ATOM 108 O LYS 124 56.739 -2.889 4.838 1.00 0.00 O ATOM 109 N ASP 125 56.079 -1.497 6.408 1.00 0.00 N ATOM 110 CA ASP 125 55.975 -0.368 5.441 1.00 0.00 C ATOM 111 C ASP 125 57.373 0.046 4.978 1.00 0.00 C ATOM 112 O ASP 125 57.524 0.864 4.089 1.00 0.00 O ATOM 113 N PHE 126 58.395 -0.524 5.563 1.00 0.00 N ATOM 114 CA PHE 126 59.796 -0.185 5.156 1.00 0.00 C ATOM 115 C PHE 126 60.466 -1.432 4.577 1.00 0.00 C ATOM 116 O PHE 126 60.730 -2.396 5.270 1.00 0.00 O ATOM 117 N ILE 127 60.740 -1.409 3.302 1.00 0.00 N ATOM 118 CA ILE 127 61.394 -2.574 2.644 1.00 0.00 C ATOM 119 C ILE 127 62.877 -2.615 3.029 1.00 0.00 C ATOM 120 O ILE 127 63.437 -3.662 3.291 1.00 0.00 O ATOM 121 N PHE 128 63.516 -1.477 3.045 1.00 0.00 N ATOM 122 CA PHE 128 64.967 -1.436 3.387 1.00 0.00 C ATOM 123 C PHE 128 65.161 -1.585 4.895 1.00 0.00 C ATOM 124 O PHE 128 64.863 -0.697 5.672 1.00 0.00 O ATOM 125 N VAL 129 65.675 -2.710 5.307 1.00 0.00 N ATOM 126 CA VAL 129 65.922 -2.954 6.757 1.00 0.00 C ATOM 127 C VAL 129 67.274 -3.652 6.901 1.00 0.00 C ATOM 128 O VAL 129 67.387 -4.858 6.781 1.00 0.00 O ATOM 129 N PHE 130 68.305 -2.889 7.141 1.00 0.00 N ATOM 130 CA PHE 130 69.668 -3.474 7.276 1.00 0.00 C ATOM 131 C PHE 130 69.926 -3.864 8.733 1.00 0.00 C ATOM 132 O PHE 130 70.072 -3.028 9.604 1.00 0.00 O ATOM 133 N GLN 131 69.983 -5.141 8.984 1.00 0.00 N ATOM 134 CA GLN 131 70.237 -5.644 10.365 1.00 0.00 C ATOM 135 C GLN 131 71.640 -5.237 10.811 1.00 0.00 C ATOM 136 O GLN 131 71.875 -4.906 11.956 1.00 0.00 O ATOM 137 N LEU 132 72.578 -5.272 9.910 1.00 0.00 N ATOM 138 CA LEU 132 73.972 -4.897 10.273 1.00 0.00 C ATOM 139 C LEU 132 74.007 -3.437 10.726 1.00 0.00 C ATOM 140 O LEU 132 74.689 -3.078 11.668 1.00 0.00 O ATOM 141 N GLY 133 73.276 -2.595 10.055 1.00 0.00 N ATOM 142 CA GLY 133 73.250 -1.152 10.426 1.00 0.00 C ATOM 143 C GLY 133 72.604 -0.998 11.808 1.00 0.00 C ATOM 144 O GLY 133 72.597 0.070 12.392 1.00 0.00 O ATOM 145 N LEU 134 72.061 -2.063 12.333 1.00 0.00 N ATOM 146 CA LEU 134 71.414 -1.997 13.678 1.00 0.00 C ATOM 147 C LEU 134 72.459 -1.580 14.718 1.00 0.00 C ATOM 148 O LEU 134 72.199 -0.784 15.602 1.00 0.00 O ATOM 149 N ASN 135 73.641 -2.119 14.614 1.00 0.00 N ATOM 150 CA ASN 135 74.721 -1.769 15.586 1.00 0.00 C ATOM 151 C ASN 135 75.054 -0.281 15.448 1.00 0.00 C ATOM 152 O ASN 135 75.274 0.414 16.422 1.00 0.00 O ATOM 153 N GLU 136 75.088 0.208 14.243 1.00 0.00 N ATOM 154 CA GLU 136 75.396 1.649 14.018 1.00 0.00 C ATOM 155 C GLU 136 74.290 2.507 14.639 1.00 0.00 C ATOM 156 O GLU 136 74.534 3.578 15.162 1.00 0.00 O ATOM 157 N THR 137 73.071 2.055 14.555 1.00 0.00 N ATOM 158 CA THR 137 71.937 2.851 15.107 1.00 0.00 C ATOM 159 C THR 137 72.127 3.053 16.620 1.00 0.00 C ATOM 160 O THR 137 71.975 4.142 17.140 1.00 0.00 O ATOM 161 N MET 138 72.450 2.007 17.325 1.00 0.00 N ATOM 162 CA MET 138 72.635 2.126 18.803 1.00 0.00 C ATOM 163 C MET 138 73.835 3.028 19.110 1.00 0.00 C ATOM 164 O MET 138 73.798 3.850 20.007 1.00 0.00 O ATOM 165 N ASN 139 74.906 2.862 18.390 1.00 0.00 N ATOM 166 CA ASN 139 76.125 3.686 18.646 1.00 0.00 C ATOM 167 C ASN 139 75.827 5.169 18.392 1.00 0.00 C ATOM 168 O ASN 139 76.223 6.029 19.157 1.00 0.00 O ATOM 169 N ASP 140 75.143 5.480 17.327 1.00 0.00 N ATOM 170 CA ASP 140 74.835 6.913 17.035 1.00 0.00 C ATOM 171 C ASP 140 74.034 7.507 18.198 1.00 0.00 C ATOM 172 O ASP 140 74.288 8.608 18.649 1.00 0.00 O ATOM 173 N SER 141 73.074 6.778 18.690 1.00 0.00 N ATOM 174 CA SER 141 72.256 7.278 19.833 1.00 0.00 C ATOM 175 C SER 141 73.146 7.433 21.064 1.00 0.00 C ATOM 176 O SER 141 73.024 8.376 21.825 1.00 0.00 O ATOM 177 N LEU 142 74.029 6.501 21.270 1.00 0.00 N ATOM 178 CA LEU 142 74.927 6.564 22.459 1.00 0.00 C ATOM 179 C LEU 142 75.720 7.876 22.458 1.00 0.00 C ATOM 180 O LEU 142 75.726 8.613 23.425 1.00 0.00 O ATOM 181 N ALA 143 76.395 8.165 21.384 1.00 0.00 N ATOM 182 CA ALA 143 77.200 9.422 21.307 1.00 0.00 C ATOM 183 C ALA 143 76.272 10.643 21.300 1.00 0.00 C ATOM 184 O ALA 143 76.525 11.636 21.956 1.00 0.00 O ATOM 185 N ILE 144 75.213 10.583 20.544 1.00 0.00 N ATOM 186 CA ILE 144 74.273 11.741 20.469 1.00 0.00 C ATOM 187 C ILE 144 73.662 12.031 21.846 1.00 0.00 C ATOM 188 O ILE 144 73.605 13.163 22.286 1.00 0.00 O ATOM 189 N CYS 145 73.197 11.020 22.527 1.00 0.00 N ATOM 190 CA CYS 145 72.579 11.233 23.874 1.00 0.00 C ATOM 191 C CYS 145 73.659 11.130 24.960 1.00 0.00 C ATOM 192 O CYS 145 73.473 11.560 26.083 1.00 0.00 O ATOM 193 N GLN 146 74.785 10.566 24.624 1.00 0.00 N ATOM 194 CA GLN 146 75.892 10.423 25.619 1.00 0.00 C ATOM 195 C GLN 146 75.388 9.684 26.862 1.00 0.00 C ATOM 196 O GLN 146 75.484 10.171 27.973 1.00 0.00 O ATOM 197 N GLU 147 74.862 8.502 26.673 1.00 0.00 N ATOM 198 CA GLU 147 74.347 7.696 27.823 1.00 0.00 C ATOM 199 C GLU 147 74.877 6.269 27.740 1.00 0.00 C ATOM 200 O GLU 147 75.423 5.848 26.737 1.00 0.00 O ATOM 201 N ASN 148 74.720 5.525 28.805 1.00 0.00 N ATOM 202 CA ASN 148 75.210 4.115 28.836 1.00 0.00 C ATOM 203 C ASN 148 74.020 3.157 28.885 1.00 0.00 C ATOM 204 O ASN 148 73.090 3.330 29.651 1.00 0.00 O ATOM 205 N PHE 149 74.052 2.143 28.061 1.00 0.00 N ATOM 206 CA PHE 149 72.935 1.153 28.019 1.00 0.00 C ATOM 207 C PHE 149 73.307 -0.091 28.828 1.00 0.00 C ATOM 208 O PHE 149 74.452 -0.499 28.884 1.00 0.00 O ATOM 209 N GLY 150 72.332 -0.694 29.455 1.00 0.00 N ATOM 210 CA GLY 150 72.585 -1.915 30.275 1.00 0.00 C ATOM 211 C GLY 150 72.280 -3.168 29.455 1.00 0.00 C ATOM 212 O GLY 150 71.500 -3.147 28.522 1.00 0.00 O ATOM 213 N LEU 151 72.910 -4.254 29.795 1.00 0.00 N ATOM 214 CA LEU 151 72.691 -5.521 29.042 1.00 0.00 C ATOM 215 C LEU 151 71.230 -5.968 29.179 1.00 0.00 C ATOM 216 O LEU 151 70.594 -6.374 28.225 1.00 0.00 O ATOM 217 N LEU 152 70.704 -5.911 30.365 1.00 0.00 N ATOM 218 CA LEU 152 69.295 -6.348 30.579 1.00 0.00 C ATOM 219 C LEU 152 68.343 -5.432 29.807 1.00 0.00 C ATOM 220 O LEU 152 67.378 -5.873 29.211 1.00 0.00 O ATOM 221 N TRP 153 68.608 -4.159 29.824 1.00 0.00 N ATOM 222 CA TRP 153 67.727 -3.195 29.106 1.00 0.00 C ATOM 223 C TRP 153 67.892 -3.368 27.593 1.00 0.00 C ATOM 224 O TRP 153 66.952 -3.229 26.834 1.00 0.00 O ATOM 225 N GLY 154 69.080 -3.652 27.148 1.00 0.00 N ATOM 226 CA GLY 154 69.306 -3.818 25.683 1.00 0.00 C ATOM 227 C GLY 154 68.486 -5.012 25.173 1.00 0.00 C ATOM 228 O GLY 154 67.860 -4.963 24.132 1.00 0.00 O ATOM 229 N GLN 155 68.505 -6.085 25.903 1.00 0.00 N ATOM 230 CA GLN 155 67.754 -7.300 25.480 1.00 0.00 C ATOM 231 C GLN 155 66.253 -7.095 25.711 1.00 0.00 C ATOM 232 O GLN 155 65.434 -7.891 25.293 1.00 0.00 O ATOM 233 N LYS 156 65.883 -6.035 26.378 1.00 0.00 N ATOM 234 CA LYS 156 64.434 -5.781 26.640 1.00 0.00 C ATOM 235 C LYS 156 63.829 -5.017 25.457 1.00 0.00 C ATOM 236 O LYS 156 62.633 -4.802 25.386 1.00 0.00 O ATOM 237 N LEU 157 64.648 -4.605 24.526 1.00 0.00 N ATOM 238 CA LEU 157 64.129 -3.848 23.344 1.00 0.00 C ATOM 239 C LEU 157 63.764 -4.815 22.219 1.00 0.00 C ATOM 240 O LEU 157 64.550 -5.648 21.811 1.00 0.00 O ATOM 241 N VAL 158 62.562 -4.700 21.718 1.00 0.00 N ATOM 242 CA VAL 158 62.101 -5.587 20.611 1.00 0.00 C ATOM 243 C VAL 158 61.241 -4.768 19.647 1.00 0.00 C ATOM 244 O VAL 158 61.344 -4.896 18.443 1.00 0.00 O ATOM 245 N ASN 159 60.387 -3.922 20.177 1.00 0.00 N ATOM 246 CA ASN 159 59.501 -3.082 19.305 1.00 0.00 C ATOM 247 C ASN 159 59.986 -1.627 19.306 1.00 0.00 C ATOM 248 O ASN 159 60.691 -1.188 20.194 1.00 0.00 O ATOM 249 N THR 160 59.608 -0.889 18.299 1.00 0.00 N ATOM 250 CA THR 160 60.026 0.541 18.189 1.00 0.00 C ATOM 251 C THR 160 59.440 1.353 19.351 1.00 0.00 C ATOM 252 O THR 160 60.103 2.185 19.942 1.00 0.00 O ATOM 253 N MET 161 58.197 1.125 19.672 1.00 0.00 N ATOM 254 CA MET 161 57.554 1.884 20.788 1.00 0.00 C ATOM 255 C MET 161 58.385 1.725 22.065 1.00 0.00 C ATOM 256 O MET 161 58.555 2.655 22.834 1.00 0.00 O ATOM 257 N ARG 162 58.899 0.552 22.292 1.00 0.00 N ATOM 258 CA ARG 162 59.723 0.303 23.511 1.00 0.00 C ATOM 259 C ARG 162 60.981 1.174 23.466 1.00 0.00 C ATOM 260 O ARG 162 61.435 1.687 24.472 1.00 0.00 O ATOM 261 N ALA 163 61.553 1.327 22.308 1.00 0.00 N ATOM 262 CA ALA 163 62.791 2.149 22.187 1.00 0.00 C ATOM 263 C ALA 163 62.501 3.603 22.574 1.00 0.00 C ATOM 264 O ALA 163 63.266 4.234 23.279 1.00 0.00 O ATOM 265 N LEU 164 61.412 4.142 22.106 1.00 0.00 N ATOM 266 CA LEU 164 61.075 5.559 22.434 1.00 0.00 C ATOM 267 C LEU 164 60.774 5.681 23.929 1.00 0.00 C ATOM 268 O LEU 164 61.128 6.651 24.573 1.00 0.00 O ATOM 269 N HIS 165 60.122 4.698 24.480 1.00 0.00 N ATOM 270 CA HIS 165 59.784 4.732 25.933 1.00 0.00 C ATOM 271 C HIS 165 61.072 4.742 26.759 1.00 0.00 C ATOM 272 O HIS 165 61.189 5.443 27.747 1.00 0.00 O ATOM 273 N ASP 166 62.034 3.960 26.364 1.00 0.00 N ATOM 274 CA ASP 166 63.316 3.907 27.120 1.00 0.00 C ATOM 275 C ASP 166 64.000 5.276 27.072 1.00 0.00 C ATOM 276 O ASP 166 64.534 5.751 28.056 1.00 0.00 O ATOM 277 N VAL 167 63.994 5.906 25.933 1.00 0.00 N ATOM 278 CA VAL 167 64.647 7.242 25.817 1.00 0.00 C ATOM 279 C VAL 167 63.926 8.230 26.738 1.00 0.00 C ATOM 280 O VAL 167 64.543 8.981 27.472 1.00 0.00 O ATOM 281 N LYS 168 62.624 8.232 26.701 1.00 0.00 N ATOM 282 CA LYS 168 61.846 9.160 27.574 1.00 0.00 C ATOM 283 C LYS 168 62.101 8.812 29.042 1.00 0.00 C ATOM 284 O LYS 168 62.307 9.674 29.876 1.00 0.00 O ATOM 285 N TYR 169 62.081 7.549 29.360 1.00 0.00 N ATOM 286 CA TYR 169 62.323 7.118 30.768 1.00 0.00 C ATOM 287 C TYR 169 63.751 7.469 31.174 1.00 0.00 C ATOM 288 O TYR 169 64.013 7.907 32.278 1.00 0.00 O ATOM 289 N SER 170 64.681 7.254 30.291 1.00 0.00 N ATOM 290 CA SER 170 66.104 7.547 30.615 1.00 0.00 C ATOM 291 C SER 170 66.273 9.043 30.897 1.00 0.00 C ATOM 292 O SER 170 66.945 9.444 31.828 1.00 0.00 O ATOM 293 N PRO 171 65.685 9.867 30.079 1.00 0.00 N ATOM 294 CA PRO 171 65.812 11.344 30.262 1.00 0.00 C ATOM 295 C PRO 171 65.161 11.787 31.575 1.00 0.00 C ATOM 296 O PRO 171 65.682 12.628 32.284 1.00 0.00 O ATOM 297 N LYS 172 64.023 11.245 31.899 1.00 0.00 N ATOM 298 CA LYS 172 63.341 11.650 33.164 1.00 0.00 C ATOM 299 C LYS 172 64.202 11.244 34.363 1.00 0.00 C ATOM 300 O LYS 172 64.342 11.977 35.326 1.00 0.00 O ATOM 301 N ALA 173 64.774 10.076 34.306 1.00 0.00 N ATOM 302 CA ALA 173 65.632 9.587 35.428 1.00 0.00 C ATOM 303 C ALA 173 66.886 10.461 35.564 1.00 0.00 C ATOM 304 O ALA 173 67.344 10.749 36.658 1.00 0.00 O ATOM 305 N ARG 174 67.448 10.876 34.464 1.00 0.00 N ATOM 306 CA ARG 174 68.677 11.722 34.521 1.00 0.00 C ATOM 307 C ARG 174 68.361 13.051 35.209 1.00 0.00 C ATOM 308 O ARG 174 69.178 13.608 35.917 1.00 0.00 O ATOM 309 N LEU 175 67.185 13.570 34.995 1.00 0.00 N ATOM 310 CA LEU 175 66.813 14.873 35.624 1.00 0.00 C ATOM 311 C LEU 175 66.229 14.623 37.018 1.00 0.00 C ATOM 312 O LEU 175 66.060 15.533 37.806 1.00 0.00 O END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 272 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 70.95 64.5 110 35.4 311 ARMSMC SECONDARY STRUCTURE . . 70.69 64.4 101 44.1 229 ARMSMC SURFACE . . . . . . . . 84.28 50.9 53 28.2 188 ARMSMC BURIED . . . . . . . . 55.75 77.2 57 46.3 123 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 133 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 123 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 97 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 80 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 53 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 100 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 78 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 72 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 62 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 38 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 35 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 33 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 22 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 30 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 5 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 14 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 14 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 9 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 12 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 13.91 (Number of atoms: 68) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 13.91 68 43.0 158 CRMSCA CRN = ALL/NP . . . . . 0.2045 CRMSCA SECONDARY STRUCTURE . . 13.15 57 49.1 116 CRMSCA SURFACE . . . . . . . . 14.77 37 38.9 95 CRMSCA BURIED . . . . . . . . 12.79 31 49.2 63 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 13.85 272 34.6 785 CRMSMC SECONDARY STRUCTURE . . 13.07 228 39.4 578 CRMSMC SURFACE . . . . . . . . 14.77 148 31.4 471 CRMSMC BURIED . . . . . . . . 12.65 124 39.5 314 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 0.00 0 0.0 634 CRMSSC RELIABLE SIDE CHAINS . 0.00 0 0.0 550 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 481 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 382 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 252 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 13.85 272 21.5 1266 CRMSALL SECONDARY STRUCTURE . . 13.07 228 24.1 945 CRMSALL SURFACE . . . . . . . . 14.77 148 19.4 762 CRMSALL BURIED . . . . . . . . 12.65 124 24.6 504 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 13.281 1.000 0.500 68 43.0 158 ERRCA SECONDARY STRUCTURE . . 12.550 1.000 0.500 57 49.1 116 ERRCA SURFACE . . . . . . . . 14.195 1.000 0.500 37 38.9 95 ERRCA BURIED . . . . . . . . 12.190 1.000 0.500 31 49.2 63 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 13.244 1.000 0.500 272 34.6 785 ERRMC SECONDARY STRUCTURE . . 12.506 1.000 0.500 228 39.4 578 ERRMC SURFACE . . . . . . . . 14.215 1.000 0.500 148 31.4 471 ERRMC BURIED . . . . . . . . 12.086 1.000 0.500 124 39.5 314 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.000 0.000 0.000 0 0.0 634 ERRSC RELIABLE SIDE CHAINS . 0.000 0.000 0.000 0 0.0 550 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 481 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 382 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 252 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 13.244 1.000 0.500 272 21.5 1266 ERRALL SECONDARY STRUCTURE . . 12.506 1.000 0.500 228 24.1 945 ERRALL SURFACE . . . . . . . . 14.215 1.000 0.500 148 19.4 762 ERRALL BURIED . . . . . . . . 12.086 1.000 0.500 124 24.6 504 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 1 17 68 158 DISTCA CA (P) 0.00 0.00 0.00 0.63 10.76 158 DISTCA CA (RMS) 0.00 0.00 0.00 4.10 7.99 DISTCA ALL (N) 0 0 0 4 66 272 1266 DISTALL ALL (P) 0.00 0.00 0.00 0.32 5.21 1266 DISTALL ALL (RMS) 0.00 0.00 0.00 4.53 8.06 DISTALL END of the results output