####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 79 ( 316), selected 79 , name T0616TS328_1-D1 # Molecule2: number of CA atoms 97 ( 804), selected 79 , name T0616-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0616TS328_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 27 12 - 38 4.84 18.90 LONGEST_CONTINUOUS_SEGMENT: 27 13 - 39 4.62 18.77 LONGEST_CONTINUOUS_SEGMENT: 27 73 - 99 4.88 20.07 LCS_AVERAGE: 26.87 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 77 - 96 1.82 20.71 LCS_AVERAGE: 12.12 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 85 - 96 0.97 21.21 LCS_AVERAGE: 7.02 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 79 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT L 9 L 9 3 4 8 3 3 3 3 6 6 9 10 11 11 13 15 15 16 17 19 19 21 28 28 LCS_GDT D 10 D 10 3 5 10 3 3 4 5 5 5 7 10 11 11 13 15 15 16 17 18 19 25 28 29 LCS_GDT Y 11 Y 11 4 5 10 3 4 4 5 5 5 5 6 7 8 13 13 20 21 21 22 24 25 28 29 LCS_GDT I 12 I 12 4 5 27 3 4 4 5 5 5 5 7 8 8 11 12 15 19 20 22 28 28 28 29 LCS_GDT P 13 P 13 4 7 27 3 4 5 5 7 8 10 12 14 18 23 25 25 26 26 27 28 28 28 29 LCS_GDT E 14 E 14 4 7 27 3 4 7 8 10 13 14 15 19 22 23 25 25 26 26 27 28 28 28 29 LCS_GDT P 15 P 15 4 7 27 3 4 6 9 12 13 15 17 19 22 23 25 25 26 26 27 28 28 28 31 LCS_GDT M 16 M 16 4 7 27 3 4 5 9 12 13 16 17 19 22 23 25 25 26 26 27 28 31 34 36 LCS_GDT D 17 D 17 4 7 27 3 4 5 5 7 12 16 17 19 22 22 25 25 26 26 33 34 37 39 40 LCS_GDT L 18 L 18 3 7 27 3 3 3 4 7 10 16 17 19 22 22 25 25 27 31 33 36 37 39 40 LCS_GDT S 19 S 19 3 11 27 3 4 7 9 12 13 16 17 19 22 23 25 25 27 31 35 36 38 39 40 LCS_GDT L 20 L 20 4 11 27 3 4 7 9 12 13 16 17 19 22 23 26 29 31 32 35 36 38 39 40 LCS_GDT V 21 V 21 4 11 27 3 4 5 7 7 12 16 17 19 22 23 25 27 31 32 35 36 38 39 40 LCS_GDT D 22 D 22 8 11 27 4 5 8 9 12 13 16 17 19 22 23 25 25 27 32 35 36 38 39 40 LCS_GDT L 23 L 23 8 11 27 4 6 8 8 12 13 16 17 19 22 23 25 25 27 31 33 36 38 39 40 LCS_GDT P 24 P 24 8 11 27 4 6 8 9 12 13 16 17 19 22 23 25 25 26 28 33 34 38 39 40 LCS_GDT E 25 E 25 8 11 27 4 6 8 9 12 13 16 17 19 22 23 25 29 31 32 35 36 38 39 40 LCS_GDT S 26 S 26 8 11 27 4 6 8 9 12 13 16 17 19 22 23 26 29 31 32 35 36 38 39 40 LCS_GDT L 27 L 27 8 11 27 4 6 8 9 12 13 16 17 19 22 23 26 29 31 32 35 36 38 39 40 LCS_GDT I 28 I 28 8 11 27 3 6 8 9 12 13 16 17 19 22 23 26 29 31 32 35 36 38 39 40 LCS_GDT Q 29 Q 29 8 11 27 3 4 8 8 8 13 15 17 19 22 23 26 29 31 32 35 36 38 39 40 LCS_GDT L 30 L 30 4 4 27 3 3 4 5 6 8 10 15 19 22 23 25 25 31 32 35 36 38 39 40 LCS_GDT S 31 S 31 4 5 27 3 4 4 5 5 7 16 17 19 22 23 26 29 31 32 35 36 38 39 40 LCS_GDT E 32 E 32 4 5 27 3 4 6 9 12 13 16 17 19 22 23 25 25 27 28 30 33 33 36 39 LCS_GDT R 33 R 33 4 5 27 3 4 5 6 10 13 16 17 19 22 23 25 26 27 32 35 36 38 39 40 LCS_GDT I 34 I 34 4 8 27 4 4 4 7 8 11 15 17 19 22 23 26 29 31 32 35 36 38 39 40 LCS_GDT A 35 A 35 4 8 27 4 4 4 7 8 9 10 11 14 18 23 25 26 27 28 30 32 32 36 39 LCS_GDT E 36 E 36 6 8 27 4 5 6 7 8 9 11 15 16 18 23 25 26 27 28 30 31 32 35 37 LCS_GDT N 37 N 37 6 8 27 4 5 6 7 8 11 13 16 17 19 22 25 26 27 28 30 33 34 36 39 LCS_GDT V 38 V 38 6 8 27 4 5 6 7 8 9 10 15 17 22 23 25 26 27 28 30 33 33 36 36 LCS_GDT H 39 H 39 6 8 27 4 5 6 7 8 9 9 10 13 18 21 23 26 27 28 30 32 32 36 36 LCS_GDT E 40 E 40 6 11 26 4 5 7 9 10 12 15 16 17 19 22 24 26 27 28 30 33 33 36 36 LCS_GDT V 41 V 41 6 11 26 3 4 6 9 10 14 15 16 17 19 22 24 26 27 28 30 33 33 36 36 LCS_GDT W 42 W 42 6 11 26 3 5 7 9 10 12 14 16 17 19 22 24 26 27 28 30 33 33 36 36 LCS_GDT A 43 A 43 6 11 26 3 5 7 9 10 12 14 16 17 19 22 24 26 27 28 30 33 33 36 36 LCS_GDT K 44 K 44 6 11 26 4 5 7 9 10 14 15 16 17 19 22 24 26 27 28 30 33 33 36 36 LCS_GDT A 45 A 45 6 11 26 4 5 7 9 10 14 15 16 17 19 22 24 26 27 28 30 33 33 36 36 LCS_GDT R 46 R 46 6 11 26 4 5 7 9 10 14 15 16 17 19 22 24 26 27 28 30 33 33 36 36 LCS_GDT I 47 I 47 6 11 26 4 5 7 9 10 14 15 16 17 19 22 24 26 27 28 30 33 33 36 36 LCS_GDT D 48 D 48 6 11 26 4 4 6 9 10 14 15 16 17 19 22 24 26 27 28 30 33 33 36 36 LCS_GDT E 49 E 49 6 11 26 4 4 6 9 10 14 15 16 17 19 22 24 26 27 28 30 33 33 36 36 LCS_GDT G 50 G 50 6 11 26 4 4 6 9 10 14 15 16 17 19 22 24 26 27 28 30 33 33 36 36 LCS_GDT W 51 W 51 6 11 26 3 4 6 8 10 14 15 16 17 19 22 24 26 27 28 30 33 33 36 36 LCS_GDT T 52 T 52 6 11 26 3 4 6 8 10 14 15 16 17 19 22 24 26 27 28 30 33 33 36 36 LCS_GDT Y 53 Y 53 6 11 26 0 4 6 7 10 14 15 16 17 19 22 24 26 27 28 30 33 33 36 36 LCS_GDT C 66 C 66 3 11 26 3 3 3 4 9 11 14 16 17 19 21 24 26 27 28 30 33 33 36 36 LCS_GDT L 67 L 67 3 8 26 3 3 4 5 6 11 15 16 17 19 22 24 25 27 28 30 33 33 36 36 LCS_GDT V 68 V 68 3 5 26 3 3 4 6 10 14 15 16 17 19 21 24 25 27 28 30 33 33 36 36 LCS_GDT P 69 P 69 3 5 26 3 3 4 5 6 8 9 13 16 17 18 20 21 25 25 26 28 31 32 34 LCS_GDT Y 70 Y 70 3 6 26 3 3 4 6 10 14 15 16 17 19 20 21 23 25 26 28 28 30 32 34 LCS_GDT D 71 D 71 4 6 26 4 4 5 6 10 14 15 16 17 19 20 22 24 25 27 28 28 31 32 34 LCS_GDT E 72 E 72 4 6 26 4 4 5 6 8 8 8 10 12 14 20 22 25 26 27 28 28 31 32 34 LCS_GDT L 73 L 73 4 6 27 4 4 5 6 8 8 10 15 17 19 22 24 26 27 28 30 33 33 36 39 LCS_GDT P 74 P 74 4 6 27 4 4 5 7 8 11 13 16 17 19 22 24 26 27 28 30 33 34 39 40 LCS_GDT E 75 E 75 4 6 27 4 4 5 6 8 11 14 16 17 19 22 24 26 27 31 35 36 38 39 40 LCS_GDT E 76 E 76 4 12 27 4 4 5 6 10 10 13 16 19 20 23 26 29 31 32 35 36 38 39 40 LCS_GDT E 77 E 77 11 20 27 5 7 12 16 18 19 20 21 21 22 23 26 29 31 32 35 36 38 39 40 LCS_GDT K 78 K 78 11 20 27 5 7 12 16 18 19 20 21 21 22 23 26 29 31 32 35 36 38 39 40 LCS_GDT E 79 E 79 11 20 27 5 7 12 16 18 19 20 21 21 22 23 26 29 31 32 35 36 38 39 40 LCS_GDT Y 80 Y 80 11 20 27 5 8 12 16 18 19 20 21 21 22 23 26 29 31 32 35 36 38 39 40 LCS_GDT D 81 D 81 11 20 27 5 8 12 16 18 19 20 21 21 22 23 26 29 31 32 35 36 38 39 40 LCS_GDT R 82 R 82 11 20 27 6 10 13 16 18 19 20 21 21 22 23 26 29 31 32 35 36 38 39 40 LCS_GDT N 83 N 83 11 20 27 9 10 13 16 18 19 20 21 21 22 22 26 29 31 32 35 36 38 39 40 LCS_GDT T 84 T 84 11 20 27 6 8 13 16 18 19 20 21 21 22 23 26 29 31 32 35 36 38 39 40 LCS_GDT A 85 A 85 12 20 27 6 8 13 16 18 19 20 21 21 22 23 26 29 31 32 35 36 38 39 40 LCS_GDT M 86 M 86 12 20 27 6 8 13 16 18 19 20 21 21 22 22 23 29 31 32 35 36 38 39 40 LCS_GDT N 87 N 87 12 20 27 9 10 13 16 18 19 20 21 21 22 23 26 29 31 32 35 36 38 39 40 LCS_GDT T 88 T 88 12 20 27 9 10 13 16 18 19 20 21 21 22 23 26 29 31 32 35 36 38 39 40 LCS_GDT I 89 I 89 12 20 27 9 10 13 16 18 19 20 21 21 22 23 26 29 31 32 35 36 38 39 40 LCS_GDT K 90 K 90 12 20 27 9 10 13 16 18 19 20 21 21 22 23 26 29 31 32 35 36 38 39 40 LCS_GDT M 91 M 91 12 20 27 9 10 13 16 18 19 20 21 21 22 23 26 29 31 32 35 36 38 39 40 LCS_GDT V 92 V 92 12 20 27 9 10 13 16 18 19 20 21 21 22 23 26 29 31 32 35 36 38 39 40 LCS_GDT K 93 K 93 12 20 27 9 10 13 16 18 19 20 21 21 22 23 26 29 31 32 35 36 38 39 40 LCS_GDT K 94 K 94 12 20 27 9 10 13 16 18 19 20 21 21 22 22 26 29 31 32 35 36 38 39 40 LCS_GDT L 95 L 95 12 20 27 9 10 13 16 18 19 20 21 21 22 23 26 29 31 32 35 36 38 39 40 LCS_GDT G 96 G 96 12 20 27 3 7 12 16 17 19 20 21 21 22 23 26 29 31 32 35 36 38 39 40 LCS_GDT F 97 F 97 11 18 27 3 5 10 13 15 18 18 21 21 22 22 23 24 25 32 34 35 38 39 39 LCS_GDT R 98 R 98 6 17 27 3 5 8 11 14 16 18 19 20 22 22 23 23 25 26 29 30 32 35 37 LCS_GDT I 99 I 99 6 14 27 3 5 6 11 13 16 16 18 20 21 21 23 23 25 25 29 30 32 35 37 LCS_AVERAGE LCS_A: 15.34 ( 7.02 12.12 26.87 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 10 13 16 18 19 20 21 21 22 23 26 29 31 32 35 36 38 39 40 GDT PERCENT_AT 9.28 10.31 13.40 16.49 18.56 19.59 20.62 21.65 21.65 22.68 23.71 26.80 29.90 31.96 32.99 36.08 37.11 39.18 40.21 41.24 GDT RMS_LOCAL 0.22 0.30 0.98 1.15 1.66 1.71 1.82 2.15 2.15 2.65 3.95 4.51 4.77 4.98 5.07 5.49 5.63 5.81 5.96 6.26 GDT RMS_ALL_AT 20.53 20.37 20.94 20.94 20.59 20.62 20.71 20.75 20.75 20.79 18.90 22.03 22.00 21.87 21.82 21.42 21.33 21.37 21.17 20.70 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA L 9 L 9 22.388 4 0.591 0.591 24.849 0.000 0.000 LGA D 10 D 10 21.463 4 0.398 0.398 21.463 0.000 0.000 LGA Y 11 Y 11 19.904 8 0.570 0.570 23.723 0.000 0.000 LGA I 12 I 12 23.214 4 0.057 0.057 23.214 0.000 0.000 LGA P 13 P 13 24.681 3 0.609 0.609 26.533 0.000 0.000 LGA E 14 E 14 25.094 5 0.395 0.395 25.094 0.000 0.000 LGA P 15 P 15 23.057 3 0.073 0.073 24.541 0.000 0.000 LGA M 16 M 16 19.505 4 0.128 0.128 20.159 0.000 0.000 LGA D 17 D 17 22.276 4 0.531 0.531 22.276 0.000 0.000 LGA L 18 L 18 21.250 4 0.591 0.591 23.286 0.000 0.000 LGA S 19 S 19 23.721 2 0.681 0.681 24.588 0.000 0.000 LGA L 20 L 20 25.802 4 0.610 0.610 26.021 0.000 0.000 LGA V 21 V 21 21.837 3 0.040 0.040 23.303 0.000 0.000 LGA D 22 D 22 26.862 4 0.357 0.357 27.852 0.000 0.000 LGA L 23 L 23 25.879 4 0.043 0.043 26.806 0.000 0.000 LGA P 24 P 24 28.926 3 0.037 0.037 28.926 0.000 0.000 LGA E 25 E 25 26.508 5 0.041 0.041 27.898 0.000 0.000 LGA S 26 S 26 27.948 2 0.085 0.085 27.948 0.000 0.000 LGA L 27 L 27 24.669 4 0.231 0.231 25.872 0.000 0.000 LGA I 28 I 28 20.096 4 0.579 0.579 21.723 0.000 0.000 LGA Q 29 Q 29 21.100 5 0.610 0.610 21.100 0.000 0.000 LGA L 30 L 30 16.274 4 0.026 0.026 17.800 0.000 0.000 LGA S 31 S 31 13.040 2 0.612 0.612 15.680 0.000 0.000 LGA E 32 E 32 18.690 5 0.157 0.157 21.727 0.000 0.000 LGA R 33 R 33 21.908 7 0.152 0.152 23.917 0.000 0.000 LGA I 34 I 34 20.850 4 0.571 0.571 21.929 0.000 0.000 LGA A 35 A 35 22.714 1 0.133 0.133 25.129 0.000 0.000 LGA E 36 E 36 25.946 5 0.326 0.326 25.946 0.000 0.000 LGA N 37 N 37 24.164 4 0.029 0.029 24.709 0.000 0.000 LGA V 38 V 38 23.790 3 0.113 0.113 24.758 0.000 0.000 LGA H 39 H 39 25.326 6 0.184 0.184 25.386 0.000 0.000 LGA E 40 E 40 25.252 5 0.621 0.621 26.207 0.000 0.000 LGA V 41 V 41 23.154 3 0.118 0.118 23.584 0.000 0.000 LGA W 42 W 42 19.557 10 0.271 0.271 23.430 0.000 0.000 LGA A 43 A 43 26.697 1 0.062 0.062 30.171 0.000 0.000 LGA K 44 K 44 30.113 5 0.053 0.053 31.343 0.000 0.000 LGA A 45 A 45 26.362 1 0.062 0.062 28.536 0.000 0.000 LGA R 46 R 46 27.514 7 0.016 0.016 31.843 0.000 0.000 LGA I 47 I 47 33.629 4 0.135 0.135 37.525 0.000 0.000 LGA D 48 D 48 35.953 4 0.130 0.130 36.833 0.000 0.000 LGA E 49 E 49 34.622 5 0.297 0.297 36.802 0.000 0.000 LGA G 50 G 50 38.655 0 0.164 0.164 39.201 0.000 0.000 LGA W 51 W 51 34.301 10 0.041 0.041 35.245 0.000 0.000 LGA T 52 T 52 36.624 3 0.584 0.584 36.624 0.000 0.000 LGA Y 53 Y 53 34.049 8 0.020 0.020 35.203 0.000 0.000 LGA C 66 C 66 26.303 2 0.552 0.552 28.257 0.000 0.000 LGA L 67 L 67 23.710 4 0.301 0.301 25.326 0.000 0.000 LGA V 68 V 68 22.725 3 0.255 0.255 22.725 0.000 0.000 LGA P 69 P 69 21.091 3 0.613 0.613 22.130 0.000 0.000 LGA Y 70 Y 70 18.291 8 0.587 0.587 19.341 0.000 0.000 LGA D 71 D 71 18.332 4 0.628 0.628 19.830 0.000 0.000 LGA E 72 E 72 16.597 5 0.111 0.111 16.597 0.000 0.000 LGA L 73 L 73 12.871 4 0.319 0.319 13.888 0.000 0.000 LGA P 74 P 74 12.766 3 0.668 0.668 12.907 0.119 0.068 LGA E 75 E 75 12.615 5 0.109 0.109 12.833 0.000 0.000 LGA E 76 E 76 9.880 5 0.128 0.128 10.904 5.952 2.646 LGA E 77 E 77 3.491 5 0.526 0.526 5.866 50.238 22.328 LGA K 78 K 78 1.596 5 0.049 0.049 1.980 75.000 33.333 LGA E 79 E 79 3.362 5 0.033 0.033 3.362 53.690 23.862 LGA Y 80 Y 80 3.334 8 0.101 0.101 3.334 55.476 18.492 LGA D 81 D 81 2.001 4 0.063 0.063 2.455 68.810 34.405 LGA R 82 R 82 1.988 7 0.092 0.092 2.215 72.976 26.537 LGA N 83 N 83 1.007 4 0.129 0.129 1.193 85.952 42.976 LGA T 84 T 84 0.980 3 0.046 0.046 1.456 85.952 49.116 LGA A 85 A 85 2.239 1 0.044 0.044 2.582 64.881 51.905 LGA M 86 M 86 2.238 4 0.026 0.026 2.238 66.786 33.393 LGA N 87 N 87 0.947 4 0.181 0.181 1.143 85.952 42.976 LGA T 88 T 88 1.254 3 0.040 0.040 1.254 88.214 50.408 LGA I 89 I 89 0.766 4 0.047 0.047 0.766 92.857 46.429 LGA K 90 K 90 0.788 5 0.034 0.034 0.967 92.857 41.270 LGA M 91 M 91 1.263 4 0.016 0.016 1.263 83.690 41.845 LGA V 92 V 92 0.963 3 0.014 0.014 0.963 90.476 51.701 LGA K 93 K 93 1.029 5 0.028 0.028 1.445 83.690 37.196 LGA K 94 K 94 1.563 5 0.063 0.063 2.151 72.976 32.434 LGA L 95 L 95 1.037 4 0.065 0.065 1.037 88.333 44.167 LGA G 96 G 96 2.352 0 0.034 0.034 3.315 63.333 63.333 LGA F 97 F 97 4.832 7 0.076 0.076 6.048 30.000 10.909 LGA R 98 R 98 9.043 7 0.041 0.041 9.988 2.381 0.866 LGA I 99 I 99 11.345 4 0.048 0.048 13.422 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 79 316 316 100.00 653 316 48.39 97 SUMMARY(RMSD_GDC): 15.613 15.660 15.660 16.089 8.274 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 79 97 4.0 21 2.15 21.134 18.780 0.935 LGA_LOCAL RMSD: 2.146 Number of atoms: 21 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 20.753 Number of assigned atoms: 79 Std_ASGN_ATOMS RMSD: 15.613 Standard rmsd on all 79 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.748792 * X + -0.651061 * Y + 0.124216 * Z + -33.652206 Y_new = 0.649321 * X + 0.758171 * Y + 0.059648 * Z + -8.800770 Z_new = -0.133011 * X + 0.035992 * Y + 0.990461 * Z + -22.367886 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.714372 0.133407 0.036322 [DEG: 40.9305 7.6436 2.0811 ] ZXZ: 2.018479 0.138235 -1.306534 [DEG: 115.6503 7.9203 -74.8589 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0616TS328_1-D1 REMARK 2: T0616-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0616TS328_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 79 97 4.0 21 2.15 18.780 15.61 REMARK ---------------------------------------------------------- MOLECULE T0616TS328_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0616 REMARK MODEL 1 REMARK PARENT 2csu_A ATOM 1 N LEU 9 -10.715 -1.934 -19.132 1.00 3.00 N ATOM 2 CA LEU 9 -11.888 -1.134 -18.808 1.00 3.00 C ATOM 3 C LEU 9 -11.656 0.350 -19.090 1.00 3.00 C ATOM 4 O LEU 9 -12.562 1.172 -19.055 1.00 3.00 O ATOM 5 N ASP 10 -10.379 0.691 -19.337 1.00 3.00 N ATOM 6 CA ASP 10 -10.046 2.086 -19.595 1.00 3.00 C ATOM 7 C ASP 10 -10.430 2.508 -21.017 1.00 3.00 C ATOM 8 O ASP 10 -10.619 3.677 -21.320 1.00 3.00 O ATOM 9 N TYR 11 -10.509 1.505 -21.914 1.00 3.00 N ATOM 10 CA TYR 11 -10.727 1.817 -23.323 1.00 3.00 C ATOM 11 C TYR 11 -12.202 2.030 -23.665 1.00 3.00 C ATOM 12 O TYR 11 -12.561 2.463 -24.751 1.00 3.00 O ATOM 13 N ILE 12 -13.077 1.668 -22.711 1.00 3.00 N ATOM 14 CA ILE 12 -14.508 1.870 -22.942 1.00 3.00 C ATOM 15 C ILE 12 -14.876 3.364 -23.055 1.00 3.00 C ATOM 16 O ILE 12 -14.727 4.142 -22.124 1.00 3.00 O ATOM 17 N PRO 13 -15.346 3.750 -24.262 1.00 3.00 N ATOM 18 CA PRO 13 -15.727 5.136 -24.545 1.00 3.00 C ATOM 19 C PRO 13 -16.794 5.693 -23.583 1.00 3.00 C ATOM 20 O PRO 13 -16.730 6.826 -23.121 1.00 3.00 O ATOM 21 N GLU 14 -17.831 4.877 -23.323 1.00 3.00 N ATOM 22 CA GLU 14 -18.921 5.330 -22.458 1.00 3.00 C ATOM 23 C GLU 14 -18.518 5.323 -20.976 1.00 3.00 C ATOM 24 O GLU 14 -17.434 4.900 -20.599 1.00 3.00 O ATOM 25 N PRO 15 -19.413 5.857 -20.121 1.00 3.00 N ATOM 26 CA PRO 15 -19.105 5.878 -18.694 1.00 3.00 C ATOM 27 C PRO 15 -19.461 4.550 -18.021 1.00 3.00 C ATOM 28 O PRO 15 -20.474 3.928 -18.311 1.00 3.00 O ATOM 29 N MET 16 -18.564 4.104 -17.124 1.00 3.00 N ATOM 30 CA MET 16 -18.827 2.895 -16.357 1.00 3.00 C ATOM 31 C MET 16 -19.000 3.226 -14.868 1.00 3.00 C ATOM 32 O MET 16 -18.180 3.893 -14.252 1.00 3.00 O ATOM 33 N ASP 17 -20.142 2.783 -14.301 1.00 3.00 N ATOM 34 CA ASP 17 -20.342 2.985 -12.867 1.00 3.00 C ATOM 35 C ASP 17 -20.371 1.665 -12.092 1.00 3.00 C ATOM 36 O ASP 17 -20.436 1.630 -10.873 1.00 3.00 O ATOM 37 N LEU 18 -20.342 0.552 -12.851 1.00 3.00 N ATOM 38 CA LEU 18 -20.278 -0.758 -12.204 1.00 3.00 C ATOM 39 C LEU 18 -19.410 -1.732 -13.000 1.00 3.00 C ATOM 40 O LEU 18 -19.533 -1.858 -14.210 1.00 3.00 O ATOM 41 N SER 19 -18.559 -2.443 -12.271 1.00 3.00 N ATOM 42 CA SER 19 -17.703 -3.438 -12.895 1.00 3.00 C ATOM 43 C SER 19 -17.739 -4.723 -12.102 1.00 3.00 C ATOM 44 O SER 19 -17.816 -4.705 -10.876 1.00 3.00 O ATOM 45 N LEU 20 -17.681 -5.844 -12.811 1.00 3.00 N ATOM 46 CA LEU 20 -17.665 -7.141 -12.173 1.00 3.00 C ATOM 47 C LEU 20 -16.294 -7.723 -12.463 1.00 3.00 C ATOM 48 O LEU 20 -15.919 -7.899 -13.628 1.00 3.00 O ATOM 49 N VAL 21 -15.531 -8.007 -11.415 1.00 3.00 N ATOM 50 CA VAL 21 -14.218 -8.567 -11.607 1.00 3.00 C ATOM 51 C VAL 21 -14.294 -10.069 -11.421 1.00 3.00 C ATOM 52 O VAL 21 -14.553 -10.571 -10.326 1.00 3.00 O ATOM 53 N ASP 22 -14.090 -10.779 -12.527 1.00 3.00 N ATOM 54 CA ASP 22 -14.148 -12.229 -12.541 1.00 3.00 C ATOM 55 C ASP 22 -12.942 -12.804 -13.269 1.00 3.00 C ATOM 56 O ASP 22 -13.036 -13.703 -14.097 1.00 3.00 O ATOM 57 N LEU 23 -11.782 -12.196 -12.970 1.00 3.00 N ATOM 58 CA LEU 23 -10.528 -12.731 -13.475 1.00 3.00 C ATOM 59 C LEU 23 -9.773 -13.474 -12.367 1.00 3.00 C ATOM 60 O LEU 23 -10.141 -13.442 -11.202 1.00 3.00 O ATOM 61 N PRO 24 -8.726 -14.208 -12.782 1.00 3.00 N ATOM 62 CA PRO 24 -7.853 -14.898 -11.841 1.00 3.00 C ATOM 63 C PRO 24 -7.260 -13.960 -10.780 1.00 3.00 C ATOM 64 O PRO 24 -7.063 -12.773 -10.984 1.00 3.00 O ATOM 65 N GLU 25 -7.018 -14.552 -9.590 1.00 3.00 N ATOM 66 CA GLU 25 -6.614 -13.775 -8.424 1.00 3.00 C ATOM 67 C GLU 25 -5.493 -12.772 -8.722 1.00 3.00 C ATOM 68 O GLU 25 -5.552 -11.609 -8.349 1.00 3.00 O ATOM 69 N SER 26 -4.427 -13.255 -9.397 1.00 3.00 N ATOM 70 CA SER 26 -3.250 -12.388 -9.497 1.00 3.00 C ATOM 71 C SER 26 -3.525 -11.107 -10.302 1.00 3.00 C ATOM 72 O SER 26 -2.765 -10.147 -10.271 1.00 3.00 O ATOM 73 N LEU 27 -4.657 -11.013 -10.993 1.00 3.00 N ATOM 74 CA LEU 27 -4.979 -9.782 -11.734 1.00 3.00 C ATOM 75 C LEU 27 -5.881 -8.885 -10.904 1.00 3.00 C ATOM 76 O LEU 27 -6.337 -7.842 -11.373 1.00 3.00 O ATOM 77 N ILE 28 -6.148 -9.286 -9.672 1.00 3.00 N ATOM 78 CA ILE 28 -6.979 -8.492 -8.776 1.00 3.00 C ATOM 79 C ILE 28 -6.052 -8.083 -7.642 1.00 3.00 C ATOM 80 O ILE 28 -5.892 -8.815 -6.659 1.00 3.00 O ATOM 81 N GLN 29 -5.404 -6.921 -7.804 1.00 3.00 N ATOM 82 CA GLN 29 -4.471 -6.414 -6.801 1.00 3.00 C ATOM 83 C GLN 29 -5.158 -6.142 -5.462 1.00 3.00 C ATOM 84 O GLN 29 -6.048 -5.297 -5.362 1.00 3.00 O ATOM 85 N LEU 30 -4.747 -6.861 -4.429 1.00 9.00 N ATOM 86 CA LEU 30 -5.346 -6.722 -3.117 1.00 9.00 C ATOM 87 C LEU 30 -4.486 -5.972 -2.112 1.00 9.00 C ATOM 88 O LEU 30 -4.880 -5.776 -0.965 1.00 9.00 O ATOM 89 N SER 31 -3.302 -5.546 -2.548 1.00 9.00 N ATOM 90 CA SER 31 -2.399 -4.807 -1.689 1.00 9.00 C ATOM 91 C SER 31 -1.583 -3.879 -2.587 1.00 9.00 C ATOM 92 O SER 31 -0.743 -4.333 -3.369 1.00 9.00 O ATOM 93 N GLU 32 -1.813 -2.558 -2.486 1.00 9.00 N ATOM 94 CA GLU 32 -1.110 -1.561 -3.293 1.00 9.00 C ATOM 95 C GLU 32 0.403 -1.534 -3.174 1.00 9.00 C ATOM 96 O GLU 32 1.070 -0.873 -3.956 1.00 9.00 O ATOM 97 N ARG 33 0.960 -2.268 -2.208 1.00 9.00 N ATOM 98 CA ARG 33 2.406 -2.290 -2.050 1.00 9.00 C ATOM 99 C ARG 33 3.073 -3.099 -3.157 1.00 9.00 C ATOM 100 O ARG 33 4.301 -3.055 -3.320 1.00 9.00 O ATOM 101 N ILE 34 2.262 -3.829 -3.920 1.00 9.00 N ATOM 102 CA ILE 34 2.727 -4.658 -5.019 1.00 9.00 C ATOM 103 C ILE 34 3.155 -3.790 -6.205 1.00 9.00 C ATOM 104 O ILE 34 2.397 -2.914 -6.633 1.00 9.00 O ATOM 105 N ALA 35 4.350 -4.056 -6.731 1.00 9.00 N ATOM 106 CA ALA 35 4.865 -3.297 -7.855 1.00 9.00 C ATOM 107 C ALA 35 4.055 -3.364 -9.146 1.00 9.00 C ATOM 108 O ALA 35 4.262 -2.548 -10.045 1.00 9.00 O ATOM 109 N GLU 36 3.118 -4.302 -9.246 1.00 9.00 N ATOM 110 CA GLU 36 2.322 -4.405 -10.459 1.00 9.00 C ATOM 111 C GLU 36 0.858 -4.072 -10.244 1.00 9.00 C ATOM 112 O GLU 36 0.012 -4.406 -11.078 1.00 9.00 O ATOM 113 N ASN 37 0.544 -3.422 -9.133 1.00 9.00 N ATOM 114 CA ASN 37 -0.828 -3.076 -8.844 1.00 9.00 C ATOM 115 C ASN 37 -1.442 -2.181 -9.933 1.00 9.00 C ATOM 116 O ASN 37 -2.645 -2.245 -10.174 1.00 9.00 O ATOM 117 N VAL 38 -0.620 -1.370 -10.586 1.00 9.00 N ATOM 118 CA VAL 38 -1.138 -0.484 -11.627 1.00 9.00 C ATOM 119 C VAL 38 -1.566 -1.260 -12.876 1.00 9.00 C ATOM 120 O VAL 38 -2.302 -0.729 -13.708 1.00 9.00 O ATOM 121 N HIS 39 -1.128 -2.512 -12.996 1.00 9.00 N ATOM 122 CA HIS 39 -1.530 -3.325 -14.131 1.00 9.00 C ATOM 123 C HIS 39 -2.867 -3.993 -13.841 1.00 9.00 C ATOM 124 O HIS 39 -3.392 -4.732 -14.656 1.00 9.00 O ATOM 125 N GLU 40 -3.408 -3.722 -12.657 1.00 3.00 N ATOM 126 CA GLU 40 -4.689 -4.290 -12.240 1.00 3.00 C ATOM 127 C GLU 40 -5.804 -3.258 -12.313 1.00 3.00 C ATOM 128 O GLU 40 -5.655 -2.131 -11.837 1.00 3.00 O ATOM 129 N VAL 41 -6.924 -3.643 -12.905 1.00 3.00 N ATOM 130 CA VAL 41 -8.053 -2.730 -13.035 1.00 3.00 C ATOM 131 C VAL 41 -8.701 -2.294 -11.718 1.00 3.00 C ATOM 132 O VAL 41 -9.246 -1.204 -11.625 1.00 3.00 O ATOM 133 N TRP 42 -8.652 -3.153 -10.699 1.00 3.00 N ATOM 134 CA TRP 42 -9.296 -2.826 -9.438 1.00 3.00 C ATOM 135 C TRP 42 -8.793 -1.390 -9.629 1.00 3.00 C ATOM 136 O TRP 42 -9.579 -0.451 -9.685 1.00 3.00 O ATOM 137 N ALA 43 -7.474 -1.234 -9.732 1.00 3.00 N ATOM 138 CA ALA 43 -6.876 0.090 -9.945 1.00 3.00 C ATOM 139 C ALA 43 -7.151 0.754 -11.300 1.00 3.00 C ATOM 140 O ALA 43 -7.654 1.874 -11.355 1.00 3.00 O ATOM 141 N LYS 44 -6.869 0.044 -12.392 1.00 3.00 N ATOM 142 CA LYS 44 -7.078 0.589 -13.721 1.00 3.00 C ATOM 143 C LYS 44 -8.508 0.966 -14.062 1.00 3.00 C ATOM 144 O LYS 44 -8.750 2.067 -14.551 1.00 3.00 O ATOM 145 N ALA 45 -9.477 0.100 -13.749 1.00 3.00 N ATOM 146 CA ALA 45 -10.870 0.345 -14.095 1.00 3.00 C ATOM 147 C ALA 45 -11.618 1.143 -13.032 1.00 3.00 C ATOM 148 O ALA 45 -12.177 2.182 -13.373 1.00 3.00 O ATOM 149 N ARG 46 -11.642 0.687 -11.764 1.00 9.00 N ATOM 150 CA ARG 46 -12.405 1.363 -10.719 1.00 9.00 C ATOM 151 C ARG 46 -11.815 2.724 -10.364 1.00 9.00 C ATOM 152 O ARG 46 -12.568 3.686 -10.203 1.00 9.00 O ATOM 153 N ILE 47 -10.489 2.827 -10.294 1.00 3.00 N ATOM 154 CA ILE 47 -9.857 4.076 -9.913 1.00 3.00 C ATOM 155 C ILE 47 -9.454 4.965 -11.091 1.00 3.00 C ATOM 156 O ILE 47 -9.760 6.164 -11.051 1.00 3.00 O ATOM 157 N ASP 48 -8.785 4.480 -12.141 1.00 3.00 N ATOM 158 CA ASP 48 -8.436 5.340 -13.273 1.00 3.00 C ATOM 159 C ASP 48 -9.544 5.527 -14.312 1.00 3.00 C ATOM 160 O ASP 48 -9.454 6.395 -15.181 1.00 3.00 O ATOM 161 N GLU 49 -10.624 4.715 -14.212 1.00 3.00 N ATOM 162 CA GLU 49 -11.782 4.800 -15.079 1.00 3.00 C ATOM 163 C GLU 49 -12.984 5.551 -14.476 1.00 3.00 C ATOM 164 O GLU 49 -13.857 6.061 -15.168 1.00 3.00 O ATOM 165 N GLY 50 -13.030 5.559 -13.130 1.00 3.00 N ATOM 166 CA GLY 50 -14.085 6.307 -12.449 1.00 3.00 C ATOM 167 C GLY 50 -15.280 5.421 -12.088 1.00 3.00 C ATOM 168 O GLY 50 -16.416 5.868 -11.971 1.00 3.00 O ATOM 169 N TRP 51 -15.001 4.114 -11.951 1.00 3.00 N ATOM 170 CA TRP 51 -16.065 3.190 -11.580 1.00 3.00 C ATOM 171 C TRP 51 -16.527 3.421 -10.138 1.00 3.00 C ATOM 172 O TRP 51 -15.743 3.660 -9.231 1.00 3.00 O ATOM 173 N THR 52 -17.860 3.385 -9.952 1.00 3.00 N ATOM 174 CA THR 52 -18.396 3.662 -8.624 1.00 3.00 C ATOM 175 C THR 52 -18.388 2.420 -7.730 1.00 3.00 C ATOM 176 O THR 52 -17.944 2.442 -6.588 1.00 3.00 O ATOM 177 N TYR 53 -18.931 1.317 -8.276 1.00 3.00 N ATOM 178 CA TYR 53 -19.012 0.092 -7.487 1.00 3.00 C ATOM 179 C TYR 53 -18.373 -1.101 -8.205 1.00 3.00 C ATOM 180 O TYR 53 -18.375 -1.211 -9.424 1.00 3.00 O ATOM 181 N CYS 66 -17.775 -1.997 -7.394 1.00 3.00 N ATOM 182 CA CYS 66 -17.144 -3.184 -7.964 1.00 3.00 C ATOM 183 C CYS 66 -17.580 -4.464 -7.237 1.00 3.00 C ATOM 184 O CYS 66 -17.552 -4.556 -6.016 1.00 3.00 O ATOM 185 N LEU 67 -17.980 -5.454 -8.023 1.00 3.00 N ATOM 186 CA LEU 67 -18.324 -6.750 -7.489 1.00 3.00 C ATOM 187 C LEU 67 -17.154 -7.637 -7.884 1.00 3.00 C ATOM 188 O LEU 67 -16.863 -7.802 -9.082 1.00 3.00 O ATOM 189 N VAL 68 -16.476 -8.184 -6.882 1.00 3.00 N ATOM 190 CA VAL 68 -15.333 -9.067 -7.103 1.00 3.00 C ATOM 191 C VAL 68 -15.802 -10.489 -6.859 1.00 3.00 C ATOM 192 O VAL 68 -16.003 -10.903 -5.712 1.00 3.00 O ATOM 193 N PRO 69 -15.982 -11.232 -7.944 1.00 3.00 N ATOM 194 CA PRO 69 -16.441 -12.605 -7.860 1.00 3.00 C ATOM 195 C PRO 69 -15.297 -13.503 -7.434 1.00 3.00 C ATOM 196 O PRO 69 -15.474 -14.427 -6.648 1.00 3.00 O ATOM 197 N TYR 70 -14.115 -13.201 -7.944 1.00 3.00 N ATOM 198 CA TYR 70 -12.920 -13.981 -7.654 1.00 3.00 C ATOM 199 C TYR 70 -12.616 -14.263 -6.182 1.00 3.00 C ATOM 200 O TYR 70 -12.734 -13.393 -5.315 1.00 3.00 O ATOM 201 N ASP 71 -12.209 -15.499 -5.931 1.00 3.00 N ATOM 202 CA ASP 71 -11.807 -15.973 -4.614 1.00 3.00 C ATOM 203 C ASP 71 -10.285 -16.014 -4.479 1.00 3.00 C ATOM 204 O ASP 71 -9.537 -15.648 -5.372 1.00 3.00 O ATOM 205 N GLU 72 -9.834 -16.445 -3.284 1.00 3.00 N ATOM 206 CA GLU 72 -8.399 -16.548 -3.047 1.00 3.00 C ATOM 207 C GLU 72 -7.906 -15.444 -2.112 1.00 3.00 C ATOM 208 O GLU 72 -6.723 -15.125 -2.040 1.00 3.00 O ATOM 209 N LEU 73 -8.869 -14.825 -1.402 1.00 3.00 N ATOM 210 CA LEU 73 -8.513 -13.732 -0.506 1.00 3.00 C ATOM 211 C LEU 73 -8.666 -14.103 0.985 1.00 3.00 C ATOM 212 O LEU 73 -8.097 -15.070 1.475 1.00 3.00 O ATOM 213 N PRO 74 -9.436 -13.275 1.719 1.00 3.00 N ATOM 214 CA PRO 74 -9.442 -13.390 3.182 1.00 3.00 C ATOM 215 C PRO 74 -10.013 -14.719 3.689 1.00 3.00 C ATOM 216 O PRO 74 -10.002 -15.015 4.877 1.00 3.00 O ATOM 217 N GLU 75 -10.494 -15.607 2.833 1.00 3.00 N ATOM 218 CA GLU 75 -11.007 -16.887 3.310 1.00 3.00 C ATOM 219 C GLU 75 -9.903 -17.938 3.363 1.00 3.00 C ATOM 220 O GLU 75 -10.073 -18.998 3.966 1.00 3.00 O ATOM 221 N GLU 76 -8.773 -17.640 2.730 1.00 3.00 N ATOM 222 CA GLU 76 -7.664 -18.580 2.689 1.00 3.00 C ATOM 223 C GLU 76 -6.613 -18.388 3.781 1.00 3.00 C ATOM 224 O GLU 76 -5.711 -19.211 3.914 1.00 3.00 O ATOM 225 N GLU 77 -6.720 -17.315 4.556 1.00 3.00 N ATOM 226 CA GLU 77 -5.741 -17.095 5.610 1.00 3.00 C ATOM 227 C GLU 77 -5.320 -15.654 5.848 1.00 3.00 C ATOM 228 O GLU 77 -5.872 -14.722 5.261 1.00 3.00 O ATOM 229 N LYS 78 -4.315 -15.480 6.704 1.00 3.00 N ATOM 230 CA LYS 78 -3.809 -14.159 7.053 1.00 3.00 C ATOM 231 C LYS 78 -3.246 -13.397 5.862 1.00 3.00 C ATOM 232 O LYS 78 -3.417 -12.186 5.756 1.00 3.00 O ATOM 233 N GLU 79 -2.573 -14.105 4.964 1.00 3.00 N ATOM 234 CA GLU 79 -2.003 -13.467 3.787 1.00 3.00 C ATOM 235 C GLU 79 -3.123 -12.997 2.850 1.00 3.00 C ATOM 236 O GLU 79 -3.046 -11.916 2.254 1.00 3.00 O ATOM 237 N TYR 80 -4.170 -13.807 2.732 1.00 3.00 N ATOM 238 CA TYR 80 -5.281 -13.425 1.883 1.00 3.00 C ATOM 239 C TYR 80 -5.993 -12.222 2.464 1.00 3.00 C ATOM 240 O TYR 80 -6.481 -11.358 1.726 1.00 3.00 O ATOM 241 N ASP 81 -6.051 -12.162 3.794 1.00 3.00 N ATOM 242 CA ASP 81 -6.710 -11.078 4.497 1.00 3.00 C ATOM 243 C ASP 81 -5.979 -9.896 5.169 1.00 3.00 C ATOM 244 O ASP 81 -6.446 -8.781 5.092 1.00 3.00 O ATOM 245 N ARG 82 -4.902 -10.154 5.895 1.00 3.00 N ATOM 246 CA ARG 82 -4.139 -9.079 6.520 1.00 3.00 C ATOM 247 C ARG 82 -3.750 -8.121 5.376 1.00 3.00 C ATOM 248 O ARG 82 -4.083 -6.928 5.391 1.00 3.00 O ATOM 249 N ASN 83 -3.076 -8.652 4.371 1.00 3.00 N ATOM 250 CA ASN 83 -2.716 -7.833 3.225 1.00 3.00 C ATOM 251 C ASN 83 -4.030 -7.508 2.461 1.00 3.00 C ATOM 252 O ASN 83 -4.339 -6.338 2.252 1.00 3.00 O ATOM 253 N THR 84 -4.830 -8.531 2.143 1.00 9.00 N ATOM 254 CA THR 84 -6.066 -8.324 1.388 1.00 9.00 C ATOM 255 C THR 84 -7.022 -7.290 1.985 1.00 9.00 C ATOM 256 O THR 84 -7.704 -6.573 1.249 1.00 9.00 O ATOM 257 N ALA 85 -7.046 -7.194 3.297 1.00 3.00 N ATOM 258 CA ALA 85 -7.886 -6.202 3.993 1.00 3.00 C ATOM 259 C ALA 85 -7.122 -4.882 3.954 1.00 3.00 C ATOM 260 O ALA 85 -7.692 -3.836 3.653 1.00 3.00 O ATOM 261 N MET 86 -5.827 -4.956 4.207 1.00 3.00 N ATOM 262 CA MET 86 -4.989 -3.768 4.176 1.00 3.00 C ATOM 263 C MET 86 -5.059 -3.141 2.770 1.00 3.00 C ATOM 264 O MET 86 -5.166 -1.928 2.614 1.00 3.00 O ATOM 265 N ASN 87 -5.152 -3.999 1.761 1.00 3.00 N ATOM 266 CA ASN 87 -5.221 -3.574 0.366 1.00 3.00 C ATOM 267 C ASN 87 -6.230 -3.280 -0.725 1.00 3.00 C ATOM 268 O ASN 87 -6.266 -2.154 -1.222 1.00 3.00 O ATOM 269 N THR 88 -7.053 -4.262 -1.091 1.00 3.00 N ATOM 270 CA THR 88 -8.076 -4.054 -2.123 1.00 3.00 C ATOM 271 C THR 88 -9.049 -2.981 -1.649 1.00 3.00 C ATOM 272 O THR 88 -9.424 -2.097 -2.405 1.00 3.00 O ATOM 273 N ILE 89 -9.447 -3.065 -0.384 1.00 3.00 N ATOM 274 CA ILE 89 -10.379 -2.101 0.192 1.00 3.00 C ATOM 275 C ILE 89 -9.723 -0.727 0.272 1.00 3.00 C ATOM 276 O ILE 89 -10.343 0.294 -0.043 1.00 3.00 O ATOM 277 N LYS 90 -8.457 -0.713 0.674 1.00 3.00 N ATOM 278 CA LYS 90 -7.699 0.526 0.768 1.00 3.00 C ATOM 279 C LYS 90 -7.658 1.207 -0.609 1.00 3.00 C ATOM 280 O LYS 90 -7.818 2.424 -0.723 1.00 3.00 O ATOM 281 N MET 91 -7.441 0.418 -1.656 1.00 3.00 N ATOM 282 CA MET 91 -7.399 0.984 -2.996 1.00 3.00 C ATOM 283 C MET 91 -8.761 1.556 -3.353 1.00 3.00 C ATOM 284 O MET 91 -8.857 2.640 -3.920 1.00 3.00 O ATOM 285 N VAL 92 -9.821 0.835 -3.007 1.00 3.00 N ATOM 286 CA VAL 92 -11.162 1.307 -3.320 1.00 3.00 C ATOM 287 C VAL 92 -11.442 2.644 -2.661 1.00 3.00 C ATOM 288 O VAL 92 -11.907 3.565 -3.315 1.00 3.00 O ATOM 289 N LYS 93 -11.158 2.750 -1.369 1.00 3.00 N ATOM 290 CA LYS 93 -11.408 3.993 -0.647 1.00 3.00 C ATOM 291 C LYS 93 -10.661 5.173 -1.263 1.00 3.00 C ATOM 292 O LYS 93 -11.158 6.300 -1.259 1.00 3.00 O ATOM 293 N LYS 94 -9.474 4.915 -1.798 1.00 3.00 N ATOM 294 CA LYS 94 -8.687 5.961 -2.427 1.00 3.00 C ATOM 295 C LYS 94 -9.391 6.526 -3.659 1.00 3.00 C ATOM 296 O LYS 94 -9.388 7.737 -3.885 1.00 3.00 O ATOM 297 N LEU 95 -9.974 5.641 -4.465 1.00 3.00 N ATOM 298 CA LEU 95 -10.657 6.066 -5.680 1.00 3.00 C ATOM 299 C LEU 95 -12.120 6.391 -5.446 1.00 3.00 C ATOM 300 O LEU 95 -12.829 6.787 -6.370 1.00 3.00 O ATOM 301 N GLY 96 -12.567 6.238 -4.204 1.00 3.00 N ATOM 302 CA GLY 96 -13.987 6.472 -3.911 1.00 3.00 C ATOM 303 C GLY 96 -14.889 5.341 -4.427 1.00 3.00 C ATOM 304 O GLY 96 -16.041 5.533 -4.793 1.00 3.00 O ATOM 305 N PHE 97 -14.323 4.133 -4.479 1.00 3.00 N ATOM 306 CA PHE 97 -15.112 3.008 -4.943 1.00 3.00 C ATOM 307 C PHE 97 -15.596 2.143 -3.775 1.00 3.00 C ATOM 308 O PHE 97 -15.013 2.097 -2.697 1.00 3.00 O ATOM 309 N ARG 98 -16.742 1.487 -3.994 1.00 3.00 N ATOM 310 CA ARG 98 -17.208 0.497 -3.028 1.00 3.00 C ATOM 311 C ARG 98 -17.100 -0.925 -3.589 1.00 3.00 C ATOM 312 O ARG 98 -17.340 -1.180 -4.761 1.00 3.00 O ATOM 313 N ILE 99 -16.691 -1.864 -2.714 1.00 3.00 N ATOM 314 CA ILE 99 -16.488 -3.229 -3.189 1.00 3.00 C ATOM 315 C ILE 99 -17.400 -4.240 -2.495 1.00 3.00 C ATOM 316 O ILE 99 -17.515 -4.293 -1.276 1.00 3.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 316 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 62.07 63.0 154 80.2 192 ARMSMC SECONDARY STRUCTURE . . 46.94 78.4 74 100.0 74 ARMSMC SURFACE . . . . . . . . 63.40 62.5 120 77.9 154 ARMSMC BURIED . . . . . . . . 57.15 64.7 34 89.5 38 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 89 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 84 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 33 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 74 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 15 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 77 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 62 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 27 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 65 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 12 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 33 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 32 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 17 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 31 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 2 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 15 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 15 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 8 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 14 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 1 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 15.61 (Number of atoms: 79) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 15.61 79 81.4 97 CRMSCA CRN = ALL/NP . . . . . 0.1976 CRMSCA SECONDARY STRUCTURE . . 14.91 37 100.0 37 CRMSCA SURFACE . . . . . . . . 15.92 62 79.5 78 CRMSCA BURIED . . . . . . . . 14.44 17 89.5 19 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 15.66 316 65.6 482 CRMSMC SECONDARY STRUCTURE . . 15.08 148 80.0 185 CRMSMC SURFACE . . . . . . . . 15.95 248 63.9 388 CRMSMC BURIED . . . . . . . . 14.54 68 72.3 94 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 0.00 0 0.0 416 CRMSSC RELIABLE SIDE CHAINS . 0.00 0 0.0 368 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 162 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 342 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 74 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 15.66 316 39.3 804 CRMSALL SECONDARY STRUCTURE . . 15.08 148 47.7 310 CRMSALL SURFACE . . . . . . . . 15.95 248 37.9 654 CRMSALL BURIED . . . . . . . . 14.54 68 45.3 150 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 11.183 0.582 0.294 79 81.4 97 ERRCA SECONDARY STRUCTURE . . 9.952 0.520 0.265 37 100.0 37 ERRCA SURFACE . . . . . . . . 11.394 0.582 0.293 62 79.5 78 ERRCA BURIED . . . . . . . . 10.414 0.579 0.300 17 89.5 19 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 11.218 0.583 0.296 316 65.6 482 ERRMC SECONDARY STRUCTURE . . 10.117 0.526 0.268 148 80.0 185 ERRMC SURFACE . . . . . . . . 11.429 0.584 0.296 248 63.9 388 ERRMC BURIED . . . . . . . . 10.446 0.578 0.299 68 72.3 94 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.000 0.000 0.000 0 0.0 416 ERRSC RELIABLE SIDE CHAINS . 0.000 0.000 0.000 0 0.0 368 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 162 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 342 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 74 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 11.218 0.583 0.296 316 39.3 804 ERRALL SECONDARY STRUCTURE . . 10.117 0.526 0.268 148 47.7 310 ERRALL SURFACE . . . . . . . . 11.429 0.584 0.296 248 37.9 654 ERRALL BURIED . . . . . . . . 10.446 0.578 0.299 68 45.3 150 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 0 15 79 97 DISTCA CA (P) 0.00 0.00 0.00 0.00 15.46 97 DISTCA CA (RMS) 0.00 0.00 0.00 0.00 8.09 DISTCA ALL (N) 0 0 0 3 58 316 804 DISTALL ALL (P) 0.00 0.00 0.00 0.37 7.21 804 DISTALL ALL (RMS) 0.00 0.00 0.00 4.03 8.04 DISTALL END of the results output