####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 71 ( 284), selected 71 , name T0614TS328_1-D1 # Molecule2: number of CA atoms 71 ( 566), selected 71 , name T0614-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0614TS328_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 90 - 111 4.68 24.22 LCS_AVERAGE: 20.13 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 96 - 107 1.97 18.97 LONGEST_CONTINUOUS_SEGMENT: 12 97 - 108 1.93 18.79 LCS_AVERAGE: 10.16 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 6 92 - 97 0.67 25.11 LCS_AVERAGE: 6.21 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 71 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 2 S 2 4 7 11 0 3 4 4 5 6 7 8 9 10 10 14 14 17 18 20 22 24 26 27 LCS_GDT H 3 H 3 4 7 11 3 4 4 6 7 7 8 9 10 10 10 14 14 17 18 20 21 21 23 24 LCS_GDT H 4 H 4 5 7 11 3 5 5 6 7 7 8 9 13 14 17 17 18 22 24 26 29 30 31 34 LCS_GDT Y 5 Y 5 5 7 11 4 5 5 6 7 7 9 10 14 16 19 22 24 27 30 30 32 33 35 36 LCS_GDT K 6 K 6 5 7 11 4 5 5 6 7 7 13 17 20 20 21 23 25 27 30 30 32 33 35 36 LCS_GDT S 7 S 7 5 7 11 4 5 5 6 7 8 16 18 20 20 22 23 25 26 30 30 32 33 35 36 LCS_GDT F 8 F 8 5 7 11 4 5 6 6 7 7 8 9 10 10 12 15 15 18 25 28 29 31 33 33 LCS_GDT K 9 K 9 5 7 11 3 4 5 5 7 7 8 9 10 10 12 13 17 20 21 27 28 31 33 33 LCS_GDT V 10 V 10 4 5 11 3 4 4 4 4 5 7 9 11 12 13 14 15 23 26 27 29 31 33 33 LCS_GDT S 11 S 11 4 5 11 1 4 4 4 4 6 8 10 11 12 13 14 15 17 18 20 22 24 26 28 LCS_GDT M 12 M 12 3 3 11 0 3 3 3 4 5 8 10 11 12 13 14 15 17 18 27 28 31 33 33 LCS_GDT Q 23 Q 23 5 6 12 3 4 5 5 6 8 10 10 11 11 11 12 12 12 13 13 14 17 17 19 LCS_GDT L 24 L 24 5 6 12 3 4 5 5 6 8 10 10 11 11 11 12 12 12 13 13 14 14 14 15 LCS_GDT G 25 G 25 5 6 12 3 4 5 5 7 8 10 10 11 11 11 12 12 12 13 13 13 14 14 15 LCS_GDT I 26 I 26 5 6 12 3 4 5 5 6 8 10 10 11 11 11 12 12 12 13 13 13 14 14 15 LCS_GDT S 27 S 27 5 7 12 3 4 5 5 7 8 10 10 11 11 11 12 12 12 13 13 13 14 14 15 LCS_GDT G 28 G 28 3 7 12 3 3 3 5 7 8 10 10 11 11 11 12 12 12 13 13 13 14 14 15 LCS_GDT D 29 D 29 3 7 12 3 3 3 4 7 8 10 10 11 11 11 12 12 12 13 13 13 14 14 15 LCS_GDT K 30 K 30 5 7 12 4 4 4 5 7 8 10 10 11 11 11 12 12 12 13 13 13 14 14 15 LCS_GDT V 31 V 31 5 7 12 4 4 4 5 7 8 9 10 11 11 11 12 12 12 13 13 13 14 14 15 LCS_GDT E 32 E 32 5 7 12 4 4 4 5 7 8 10 10 11 11 11 12 12 12 12 12 13 14 14 15 LCS_GDT I 33 I 33 5 7 12 4 4 4 5 7 8 10 10 11 11 11 12 12 12 12 12 13 14 14 15 LCS_GDT D 34 D 34 5 6 12 3 4 4 5 7 8 8 10 10 10 11 12 12 12 12 12 12 12 13 14 LCS_GDT P 51 P 51 3 6 10 3 3 6 6 7 9 10 11 15 17 18 22 24 27 30 30 32 33 35 36 LCS_GDT I 52 I 52 3 6 10 3 3 6 6 7 9 10 11 15 16 18 21 24 27 30 30 32 33 35 36 LCS_GDT S 53 S 53 3 6 10 3 3 6 6 7 9 10 11 15 16 18 21 24 27 30 30 32 33 35 36 LCS_GDT I 54 I 54 3 6 10 3 3 6 6 7 9 10 11 15 16 18 20 22 22 29 30 32 33 35 36 LCS_GDT D 55 D 55 3 6 12 3 3 4 4 7 9 10 11 15 16 18 20 22 27 29 30 32 33 35 36 LCS_GDT S 56 S 56 3 6 12 3 3 4 5 7 9 10 11 15 16 18 21 24 27 30 30 32 33 35 36 LCS_GDT D 57 D 57 3 8 12 0 3 4 4 7 9 10 11 15 16 18 20 24 27 30 30 32 33 35 36 LCS_GDT L 58 L 58 4 8 12 3 4 4 5 7 9 10 12 17 19 21 23 24 27 30 30 32 33 35 36 LCS_GDT L 59 L 59 4 8 12 3 4 4 10 12 15 16 18 20 20 22 23 25 27 30 30 32 33 35 36 LCS_GDT C 60 C 60 5 8 12 3 4 5 6 9 12 16 18 20 20 22 23 25 27 30 30 32 33 35 36 LCS_GDT A 61 A 61 5 8 12 3 4 5 6 7 9 10 10 10 12 12 19 21 24 26 28 29 31 33 34 LCS_GDT C 62 C 62 5 8 12 3 4 5 6 7 9 10 10 10 12 12 14 14 15 17 18 20 21 21 27 LCS_GDT D 63 D 63 5 8 12 3 4 5 6 7 9 10 10 10 12 12 14 14 15 17 18 20 21 21 25 LCS_GDT L 64 L 64 5 8 12 3 4 5 6 7 9 10 10 10 12 12 14 14 15 17 18 20 21 21 25 LCS_GDT A 65 A 65 4 7 12 3 4 5 6 7 9 10 10 10 12 12 14 14 15 16 18 20 21 21 25 LCS_GDT E 66 E 66 4 7 12 3 4 5 6 7 9 10 10 10 12 12 14 14 15 16 18 18 18 21 21 LCS_GDT I 74 I 74 3 4 6 0 3 3 4 4 4 6 6 7 9 10 11 12 13 16 17 17 19 26 27 LCS_GDT F 75 F 75 3 4 6 0 3 3 4 4 4 6 6 7 10 13 13 16 20 24 28 29 31 33 34 LCS_GDT K 76 K 76 3 4 6 0 3 4 4 4 7 10 13 16 19 22 23 25 25 27 28 30 33 35 36 LCS_GDT L 77 L 77 3 4 6 5 5 8 9 12 15 16 18 20 20 22 23 25 27 30 30 32 33 35 36 LCS_GDT T 78 T 78 3 4 6 3 5 6 10 12 15 16 18 20 20 22 23 25 27 30 30 32 33 35 36 LCS_GDT Y 79 Y 79 3 4 6 3 3 4 4 5 8 10 12 17 19 21 23 24 27 30 30 32 33 35 36 LCS_GDT K 86 K 86 3 4 8 0 3 3 3 5 5 6 6 8 9 11 12 13 15 16 19 20 22 23 25 LCS_GDT H 87 H 87 5 6 9 3 4 5 5 5 6 8 8 8 9 11 12 13 15 16 19 20 20 23 24 LCS_GDT L 88 L 88 5 6 10 3 4 5 6 6 7 8 11 11 12 13 14 15 17 19 21 21 24 26 28 LCS_GDT Y 89 Y 89 5 6 19 3 4 5 6 6 9 10 11 12 13 14 19 21 22 23 25 26 28 31 33 LCS_GDT F 90 F 90 5 6 22 3 4 5 6 6 7 8 10 15 16 19 21 21 22 26 29 30 31 34 36 LCS_GDT E 91 E 91 5 6 22 3 4 5 6 6 7 8 10 15 16 19 22 24 26 30 30 32 33 35 36 LCS_GDT S 92 S 92 6 6 22 5 5 6 7 7 7 9 14 17 20 21 23 24 26 30 30 32 33 35 36 LCS_GDT D 93 D 93 6 6 22 5 5 6 7 7 9 13 17 19 20 22 23 25 25 27 28 29 33 35 36 LCS_GDT A 94 A 94 6 6 22 5 5 6 7 7 8 11 13 15 20 21 23 25 25 27 28 29 31 33 33 LCS_GDT A 95 A 95 6 6 22 5 5 6 7 7 7 8 11 13 20 21 22 25 25 27 28 29 31 33 33 LCS_GDT T 96 T 96 6 12 22 5 5 6 7 9 15 16 18 20 20 22 23 25 27 30 30 32 33 35 36 LCS_GDT V 97 V 97 6 12 22 4 5 7 10 12 15 16 18 20 20 22 23 25 27 30 30 32 33 35 36 LCS_GDT N 98 N 98 5 12 22 4 4 7 10 12 15 16 18 20 20 22 23 25 27 30 30 32 33 35 36 LCS_GDT E 99 E 99 5 12 22 4 4 8 10 12 15 16 18 20 20 22 23 25 27 30 30 32 33 35 36 LCS_GDT I 100 I 100 5 12 22 4 5 8 10 12 15 16 18 20 20 22 23 25 27 30 30 32 33 35 36 LCS_GDT V 101 V 101 5 12 22 5 5 8 10 12 15 16 18 20 20 22 23 25 27 30 30 32 33 35 36 LCS_GDT L 102 L 102 5 12 22 5 5 8 10 12 15 16 18 20 20 22 23 25 27 30 30 32 33 35 36 LCS_GDT K 103 K 103 5 12 22 5 5 8 10 12 15 16 18 20 20 22 23 25 27 30 30 32 33 35 36 LCS_GDT V 104 V 104 5 12 22 5 5 8 10 12 15 16 18 20 20 22 23 25 27 30 30 32 33 35 36 LCS_GDT N 105 N 105 5 12 22 3 5 8 9 12 15 16 18 20 20 22 23 25 27 30 30 32 33 35 36 LCS_GDT Y 106 Y 106 5 12 22 3 5 8 9 12 15 16 18 20 20 22 23 25 27 30 30 32 33 35 36 LCS_GDT I 107 I 107 5 12 22 3 3 7 9 12 15 16 18 20 20 22 23 25 27 30 30 32 33 35 36 LCS_GDT L 108 L 108 5 12 22 3 3 7 8 11 13 16 18 20 20 22 23 25 27 30 30 32 33 35 36 LCS_GDT E 109 E 109 3 4 22 1 3 3 3 4 10 15 18 20 20 22 23 25 27 30 30 32 33 35 36 LCS_GDT S 110 S 110 3 4 22 0 3 3 3 6 7 10 14 19 20 22 23 25 25 27 28 30 33 35 36 LCS_GDT R 111 R 111 3 4 22 0 3 3 3 3 4 4 5 11 12 16 19 22 24 27 28 29 31 33 33 LCS_AVERAGE LCS_A: 12.17 ( 6.21 10.16 20.13 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 5 5 8 10 12 15 16 18 20 20 22 23 25 27 30 30 32 33 35 36 GDT PERCENT_AT 7.04 7.04 11.27 14.08 16.90 21.13 22.54 25.35 28.17 28.17 30.99 32.39 35.21 38.03 42.25 42.25 45.07 46.48 49.30 50.70 GDT RMS_LOCAL 0.22 0.22 1.18 1.45 1.79 2.14 2.30 2.56 2.87 2.87 3.49 3.62 3.95 4.85 5.23 5.23 5.48 5.62 5.97 6.15 GDT RMS_ALL_AT 25.44 25.44 19.00 19.06 18.80 19.11 19.16 19.07 19.05 19.05 18.82 19.01 18.89 20.46 20.09 20.09 20.32 20.25 20.06 20.12 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA S 2 S 2 16.774 2 0.703 0.703 18.258 0.000 0.000 LGA H 3 H 3 17.980 6 0.668 0.668 17.980 0.000 0.000 LGA H 4 H 4 12.186 6 0.035 0.035 14.082 0.000 0.000 LGA Y 5 Y 5 8.502 8 0.093 0.093 9.868 15.476 5.159 LGA K 6 K 6 4.514 5 0.065 0.065 7.399 22.262 9.894 LGA S 7 S 7 5.887 2 0.088 0.088 9.247 14.286 9.524 LGA F 8 F 8 13.219 7 0.686 0.686 14.943 0.000 0.000 LGA K 9 K 9 15.687 5 0.278 0.278 16.124 0.000 0.000 LGA V 10 V 10 14.680 3 0.605 0.605 15.507 0.000 0.000 LGA S 11 S 11 18.579 2 0.620 0.620 18.579 0.000 0.000 LGA M 12 M 12 17.716 4 0.066 0.066 19.273 0.000 0.000 LGA Q 23 Q 23 31.762 5 0.055 0.055 31.762 0.000 0.000 LGA L 24 L 24 31.550 4 0.059 0.059 34.114 0.000 0.000 LGA G 25 G 25 34.896 0 0.071 0.071 35.036 0.000 0.000 LGA I 26 I 26 36.552 4 0.045 0.045 38.774 0.000 0.000 LGA S 27 S 27 39.522 2 0.600 0.600 39.522 0.000 0.000 LGA G 28 G 28 39.058 0 0.296 0.296 39.445 0.000 0.000 LGA D 29 D 29 35.782 4 0.656 0.656 37.019 0.000 0.000 LGA K 30 K 30 35.276 5 0.679 0.679 35.717 0.000 0.000 LGA V 31 V 31 32.616 3 0.113 0.113 32.989 0.000 0.000 LGA E 32 E 32 32.532 5 0.092 0.092 33.863 0.000 0.000 LGA I 33 I 33 31.121 4 0.120 0.120 32.581 0.000 0.000 LGA D 34 D 34 35.332 4 0.597 0.597 35.919 0.000 0.000 LGA P 51 P 51 12.069 3 0.587 0.587 14.128 0.000 0.000 LGA I 52 I 52 14.065 4 0.131 0.131 14.065 0.000 0.000 LGA S 53 S 53 13.473 2 0.128 0.128 16.740 0.000 0.000 LGA I 54 I 54 14.269 4 0.208 0.208 14.269 0.000 0.000 LGA D 55 D 55 13.254 4 0.076 0.076 13.900 0.000 0.000 LGA S 56 S 56 10.653 2 0.660 0.660 11.334 0.119 0.079 LGA D 57 D 57 11.390 4 0.614 0.614 11.476 0.000 0.000 LGA L 58 L 58 6.600 4 0.689 0.689 7.745 26.786 13.393 LGA L 59 L 59 2.355 4 0.043 0.043 3.165 61.190 30.595 LGA C 60 C 60 3.406 2 0.627 0.627 7.470 34.643 23.095 LGA A 61 A 61 9.401 1 0.096 0.096 11.175 3.690 2.952 LGA C 62 C 62 15.598 2 0.024 0.024 18.593 0.000 0.000 LGA D 63 D 63 20.286 4 0.085 0.085 22.970 0.000 0.000 LGA L 64 L 64 27.497 4 0.066 0.066 28.270 0.000 0.000 LGA A 65 A 65 30.593 1 0.045 0.045 34.327 0.000 0.000 LGA E 66 E 66 37.271 5 0.154 0.154 37.971 0.000 0.000 LGA I 74 I 74 17.397 4 0.123 0.123 19.140 0.000 0.000 LGA F 75 F 75 10.884 7 0.435 0.435 13.433 1.429 0.519 LGA K 76 K 76 6.293 5 0.630 0.630 7.381 35.476 15.767 LGA L 77 L 77 2.808 4 0.551 0.551 3.271 55.476 27.738 LGA T 78 T 78 3.242 3 0.089 0.089 6.308 40.357 23.061 LGA Y 79 Y 79 8.783 8 0.219 0.219 10.558 4.048 1.349 LGA K 86 K 86 27.102 5 0.075 0.075 27.623 0.000 0.000 LGA H 87 H 87 27.886 6 0.543 0.543 28.418 0.000 0.000 LGA L 88 L 88 24.270 4 0.095 0.095 25.014 0.000 0.000 LGA Y 89 Y 89 20.713 8 0.347 0.347 22.406 0.000 0.000 LGA F 90 F 90 16.459 7 0.068 0.068 17.545 0.000 0.000 LGA E 91 E 91 12.425 5 0.025 0.025 14.027 0.000 0.000 LGA S 92 S 92 8.513 2 0.639 0.639 9.448 2.619 1.746 LGA D 93 D 93 8.143 4 0.032 0.032 8.143 12.738 6.369 LGA A 94 A 94 9.736 1 0.101 0.101 9.736 1.548 1.238 LGA A 95 A 95 8.348 1 0.115 0.115 8.348 6.905 5.524 LGA T 96 T 96 3.352 3 0.526 0.526 4.238 48.571 27.755 LGA V 97 V 97 2.702 3 0.177 0.177 2.702 60.952 34.830 LGA N 98 N 98 2.503 4 0.570 0.570 4.291 55.952 27.976 LGA E 99 E 99 1.790 5 0.237 0.237 1.790 75.000 33.333 LGA I 100 I 100 1.242 4 0.045 0.045 1.247 83.690 41.845 LGA V 101 V 101 0.519 3 0.207 0.207 0.736 90.476 51.701 LGA L 102 L 102 0.380 4 0.117 0.117 0.565 97.619 48.810 LGA K 103 K 103 0.851 5 0.181 0.181 1.124 88.214 39.206 LGA V 104 V 104 2.162 3 0.212 0.212 2.341 68.810 39.320 LGA N 105 N 105 2.513 4 0.057 0.057 2.524 62.976 31.488 LGA Y 106 Y 106 2.185 8 0.173 0.173 2.185 68.810 22.937 LGA I 107 I 107 2.261 4 0.615 0.615 2.261 68.810 34.405 LGA L 108 L 108 3.830 4 0.570 0.570 3.830 46.667 23.333 LGA E 109 E 109 4.079 5 0.642 0.642 4.616 38.929 17.302 LGA S 110 S 110 8.072 2 0.603 0.603 8.597 7.976 5.317 LGA R 111 R 111 11.444 7 0.091 0.091 11.444 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 71 284 284 100.00 566 284 50.18 71 SUMMARY(RMSD_GDC): 18.031 17.964 17.964 18.345 9.261 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 71 71 4.0 18 2.56 22.183 19.873 0.675 LGA_LOCAL RMSD: 2.565 Number of atoms: 18 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 19.067 Number of assigned atoms: 71 Std_ASGN_ATOMS RMSD: 18.031 Standard rmsd on all 71 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.879840 * X + 0.451509 * Y + -0.148398 * Z + 39.294010 Y_new = 0.454897 * X + 0.890460 * Y + 0.012222 * Z + 13.824231 Z_new = 0.137661 * X + -0.056752 * Y + -0.988852 * Z + 39.401524 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.664419 -0.138099 -3.084264 [DEG: 152.6600 -7.9125 -176.7153 ] ZXZ: -1.652972 2.992136 1.961828 [DEG: -94.7083 171.4368 112.4044 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0614TS328_1-D1 REMARK 2: T0614-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0614TS328_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 71 71 4.0 18 2.56 19.873 18.03 REMARK ---------------------------------------------------------- MOLECULE T0614TS328_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0614 REMARK MODEL 1 REMARK PARENT 2zfn_A ATOM 1 N SER 2 3.453 56.855 42.316 1.00 3.00 N ATOM 2 CA SER 2 3.410 56.093 43.575 1.00 3.00 C ATOM 3 C SER 2 4.005 54.681 43.585 1.00 3.00 C ATOM 4 O SER 2 3.805 53.950 44.562 1.00 3.00 O ATOM 5 N HIS 3 4.667 54.257 42.518 1.00 3.00 N ATOM 6 CA HIS 3 5.272 52.932 42.517 1.00 3.00 C ATOM 7 C HIS 3 6.524 52.970 41.637 1.00 3.00 C ATOM 8 O HIS 3 6.468 53.395 40.475 1.00 3.00 O ATOM 9 N HIS 4 7.654 52.577 42.217 1.00 3.00 N ATOM 10 CA HIS 4 8.945 52.587 41.528 1.00 3.00 C ATOM 11 C HIS 4 9.962 51.837 42.392 1.00 3.00 C ATOM 12 O HIS 4 9.786 51.704 43.596 1.00 3.00 O ATOM 13 N TYR 5 11.036 51.335 41.761 1.00 3.00 N ATOM 14 CA TYR 5 12.094 50.637 42.471 1.00 3.00 C ATOM 15 C TYR 5 13.342 51.516 42.412 1.00 3.00 C ATOM 16 O TYR 5 13.580 52.208 41.416 1.00 3.00 O ATOM 17 N LYS 6 14.137 51.513 43.477 1.00 9.00 N ATOM 18 CA LYS 6 15.331 52.341 43.536 1.00 9.00 C ATOM 19 C LYS 6 16.549 51.450 43.823 1.00 9.00 C ATOM 20 O LYS 6 16.513 50.658 44.748 1.00 9.00 O ATOM 21 N SER 7 17.587 51.594 43.000 1.00 3.00 N ATOM 22 CA SER 7 18.793 50.778 43.124 1.00 3.00 C ATOM 23 C SER 7 19.832 51.497 43.985 1.00 3.00 C ATOM 24 O SER 7 20.041 52.709 43.829 1.00 3.00 O ATOM 25 N PHE 8 20.500 50.739 44.849 1.00 3.00 N ATOM 26 CA PHE 8 21.498 51.316 45.746 1.00 3.00 C ATOM 27 C PHE 8 22.719 51.927 45.064 1.00 3.00 C ATOM 28 O PHE 8 23.419 52.741 45.656 1.00 3.00 O ATOM 29 N LYS 9 22.954 51.558 43.799 1.00 9.00 N ATOM 30 CA LYS 9 24.115 52.074 43.075 1.00 9.00 C ATOM 31 C LYS 9 23.832 52.015 41.588 1.00 9.00 C ATOM 32 O LYS 9 24.518 51.331 40.815 1.00 9.00 O ATOM 33 N VAL 10 22.846 52.774 41.157 1.00 3.00 N ATOM 34 CA VAL 10 22.434 52.718 39.776 1.00 3.00 C ATOM 35 C VAL 10 23.484 53.124 38.750 1.00 3.00 C ATOM 36 O VAL 10 23.619 52.461 37.720 1.00 3.00 O ATOM 37 N SER 11 24.190 54.226 39.020 1.00 3.00 N ATOM 38 CA SER 11 25.204 54.737 38.099 1.00 3.00 C ATOM 39 C SER 11 26.308 53.711 37.882 1.00 3.00 C ATOM 40 O SER 11 26.755 53.516 36.743 1.00 3.00 O ATOM 41 N MET 12 26.723 53.072 38.969 1.00 3.00 N ATOM 42 CA MET 12 27.778 52.066 38.904 1.00 3.00 C ATOM 43 C MET 12 28.742 52.709 37.873 1.00 3.00 C ATOM 44 O MET 12 28.344 52.942 36.716 1.00 3.00 O ATOM 85 N GLN 23 39.070 57.378 17.455 1.00 3.00 N ATOM 86 CA GLN 23 39.299 57.136 16.044 1.00 3.00 C ATOM 87 C GLN 23 40.812 57.040 15.861 1.00 3.00 C ATOM 88 O GLN 23 41.573 57.862 16.377 1.00 3.00 O ATOM 89 N LEU 24 41.256 56.022 15.159 1.00 3.00 N ATOM 90 CA LEU 24 42.686 55.928 14.840 1.00 3.00 C ATOM 91 C LEU 24 43.254 57.234 14.251 1.00 3.00 C ATOM 92 O LEU 24 42.744 57.739 13.248 1.00 3.00 O ATOM 93 N GLY 25 44.318 57.797 14.871 1.00 3.00 N ATOM 94 CA GLY 25 44.985 58.938 14.240 1.00 3.00 C ATOM 95 C GLY 25 45.764 58.603 12.968 1.00 3.00 C ATOM 96 O GLY 25 46.398 57.551 12.881 1.00 3.00 O ATOM 97 N ILE 26 45.711 59.514 12.003 1.00 3.00 N ATOM 98 CA ILE 26 46.581 59.485 10.824 1.00 3.00 C ATOM 99 C ILE 26 47.845 60.271 11.101 1.00 3.00 C ATOM 100 O ILE 26 47.796 61.326 11.755 1.00 3.00 O ATOM 101 N SER 27 48.965 59.751 10.596 1.00 3.00 N ATOM 102 CA SER 27 50.268 60.415 10.683 1.00 3.00 C ATOM 103 C SER 27 50.243 61.814 10.049 1.00 3.00 C ATOM 104 O SER 27 50.820 62.758 10.591 1.00 3.00 O ATOM 105 N GLY 28 49.567 61.935 8.905 1.00 3.00 N ATOM 106 CA GLY 28 49.509 63.189 8.140 1.00 3.00 C ATOM 107 C GLY 28 48.378 64.121 8.607 1.00 3.00 C ATOM 108 O GLY 28 47.677 64.731 7.793 1.00 3.00 O ATOM 109 N ASP 29 48.209 64.219 9.922 1.00 3.00 N ATOM 110 CA ASP 29 47.185 65.076 10.510 1.00 3.00 C ATOM 111 C ASP 29 47.845 66.058 11.471 1.00 3.00 C ATOM 112 O ASP 29 48.828 65.721 12.141 1.00 3.00 O ATOM 113 N LYS 30 47.293 67.266 11.539 1.00 3.00 N ATOM 114 CA LYS 30 47.943 68.361 12.258 1.00 3.00 C ATOM 115 C LYS 30 47.583 68.407 13.752 1.00 3.00 C ATOM 116 O LYS 30 48.289 69.042 14.550 1.00 3.00 O ATOM 117 N VAL 31 46.496 67.733 14.125 1.00 3.00 N ATOM 118 CA VAL 31 46.130 67.602 15.537 1.00 3.00 C ATOM 119 C VAL 31 45.707 66.180 15.913 1.00 3.00 C ATOM 120 O VAL 31 44.732 65.646 15.387 1.00 3.00 O ATOM 121 N GLU 32 46.500 65.582 16.803 1.00 3.00 N ATOM 122 CA GLU 32 46.235 64.299 17.449 1.00 3.00 C ATOM 123 C GLU 32 45.825 64.625 18.902 1.00 3.00 C ATOM 124 O GLU 32 46.331 65.605 19.474 1.00 3.00 O ATOM 125 N ILE 33 44.903 63.822 19.503 1.00 3.00 N ATOM 126 CA ILE 33 44.454 64.124 20.870 1.00 3.00 C ATOM 127 C ILE 33 45.593 64.137 21.872 1.00 3.00 C ATOM 128 O ILE 33 46.516 63.318 21.795 1.00 3.00 O ATOM 129 N ASP 34 45.521 65.076 22.802 1.00 3.00 N ATOM 130 CA ASP 34 46.430 65.116 23.916 1.00 3.00 C ATOM 131 C ASP 34 46.175 63.883 24.780 1.00 3.00 C ATOM 132 O ASP 34 47.112 63.210 25.235 1.00 3.00 O ATOM 197 N PRO 51 15.469 41.404 40.563 1.00 9.00 N ATOM 198 CA PRO 51 16.027 40.113 40.205 1.00 9.00 C ATOM 199 C PRO 51 15.873 39.892 38.719 1.00 9.00 C ATOM 200 O PRO 51 16.034 38.768 38.243 1.00 9.00 O ATOM 201 N ILE 52 15.501 40.931 37.978 1.00 3.00 N ATOM 202 CA ILE 52 15.323 40.756 36.550 1.00 3.00 C ATOM 203 C ILE 52 16.096 41.804 35.774 1.00 3.00 C ATOM 204 O ILE 52 16.556 42.798 36.343 1.00 3.00 O ATOM 205 N SER 53 16.234 41.623 34.458 1.00 3.00 N ATOM 206 CA SER 53 16.955 42.569 33.629 1.00 3.00 C ATOM 207 C SER 53 16.299 43.940 33.663 1.00 3.00 C ATOM 208 O SER 53 15.144 44.081 34.054 1.00 3.00 O ATOM 209 N ILE 54 17.073 44.960 33.292 1.00 3.00 N ATOM 210 CA ILE 54 16.573 46.339 33.241 1.00 3.00 C ATOM 211 C ILE 54 18.022 46.694 33.573 1.00 3.00 C ATOM 212 O ILE 54 18.373 46.904 34.755 1.00 3.00 O ATOM 213 N ASP 55 18.875 46.705 32.555 1.00 3.00 N ATOM 214 CA ASP 55 20.222 47.222 32.693 1.00 3.00 C ATOM 215 C ASP 55 20.687 47.949 31.426 1.00 3.00 C ATOM 216 O ASP 55 20.216 47.634 30.335 1.00 3.00 O ATOM 217 N SER 56 21.630 48.890 31.577 1.00 3.00 N ATOM 218 CA SER 56 22.065 49.789 30.493 1.00 3.00 C ATOM 219 C SER 56 23.547 50.074 30.700 1.00 3.00 C ATOM 220 O SER 56 23.991 50.451 31.803 1.00 3.00 O ATOM 221 N ASP 57 24.326 49.854 29.644 1.00 3.00 N ATOM 222 CA ASP 57 25.762 50.043 29.705 1.00 3.00 C ATOM 223 C ASP 57 26.177 51.139 28.740 1.00 3.00 C ATOM 224 O ASP 57 25.966 51.025 27.516 1.00 3.00 O ATOM 225 N LEU 58 26.772 52.181 29.280 1.00 3.00 N ATOM 226 CA LEU 58 27.173 53.366 28.506 1.00 3.00 C ATOM 227 C LEU 58 28.640 53.722 28.782 1.00 3.00 C ATOM 228 O LEU 58 29.134 53.513 29.917 1.00 3.00 O ATOM 229 N LEU 59 29.352 54.237 27.763 1.00 3.00 N ATOM 230 CA LEU 59 30.727 54.673 27.899 1.00 3.00 C ATOM 231 C LEU 59 30.772 56.139 27.494 1.00 3.00 C ATOM 232 O LEU 59 30.139 56.523 26.510 1.00 3.00 O ATOM 233 N CYS 60 31.426 56.970 28.316 1.00 3.00 N ATOM 234 CA CYS 60 31.632 58.412 28.033 1.00 3.00 C ATOM 235 C CYS 60 33.113 58.597 27.764 1.00 3.00 C ATOM 236 O CYS 60 33.953 58.212 28.612 1.00 3.00 O ATOM 237 N ALA 61 33.430 59.192 26.620 1.00 3.00 N ATOM 238 CA ALA 61 34.810 59.497 26.273 1.00 3.00 C ATOM 239 C ALA 61 34.929 61.003 26.235 1.00 3.00 C ATOM 240 O ALA 61 34.102 61.660 25.599 1.00 3.00 O ATOM 241 N CYS 62 35.888 61.550 26.964 1.00 3.00 N ATOM 242 CA CYS 62 36.252 62.965 26.817 1.00 3.00 C ATOM 243 C CYS 62 37.561 63.031 26.066 1.00 3.00 C ATOM 244 O CYS 62 38.586 62.500 26.525 1.00 3.00 O ATOM 245 N ASP 63 37.542 63.632 24.871 1.00 3.00 N ATOM 246 CA ASP 63 38.786 63.742 24.081 1.00 3.00 C ATOM 247 C ASP 63 39.349 65.158 24.220 1.00 3.00 C ATOM 248 O ASP 63 38.643 66.143 24.006 1.00 3.00 O ATOM 249 N LEU 64 40.616 65.231 24.578 1.00 3.00 N ATOM 250 CA LEU 64 41.279 66.513 24.801 1.00 3.00 C ATOM 251 C LEU 64 42.273 66.786 23.692 1.00 3.00 C ATOM 252 O LEU 64 43.097 65.934 23.372 1.00 3.00 O ATOM 253 N ALA 65 42.184 67.975 23.103 1.00 3.00 N ATOM 254 CA ALA 65 43.173 68.393 22.111 1.00 3.00 C ATOM 255 C ALA 65 44.096 69.454 22.736 1.00 3.00 C ATOM 256 O ALA 65 45.291 69.471 22.464 1.00 3.00 O ATOM 257 N GLU 66 43.520 70.313 23.584 1.00 3.00 N ATOM 258 CA GLU 66 44.233 71.286 24.429 1.00 3.00 C ATOM 259 C GLU 66 43.343 71.698 25.621 1.00 3.00 C ATOM 260 O GLU 66 42.333 71.039 25.920 1.00 3.00 O ATOM 289 N ILE 74 29.175 60.001 24.199 1.00 3.00 N ATOM 290 CA ILE 74 28.503 59.203 25.221 1.00 3.00 C ATOM 291 C ILE 74 27.807 58.033 24.590 1.00 3.00 C ATOM 292 O ILE 74 26.845 58.196 23.853 1.00 3.00 O ATOM 293 N PHE 75 28.308 56.818 24.817 1.00 3.00 N ATOM 294 CA PHE 75 27.687 55.630 24.256 1.00 3.00 C ATOM 295 C PHE 75 26.337 55.310 24.918 1.00 3.00 C ATOM 296 O PHE 75 26.164 54.253 25.533 1.00 3.00 O ATOM 297 N LYS 76 25.379 56.218 24.749 1.00 9.00 N ATOM 298 CA LYS 76 24.034 56.055 25.322 1.00 9.00 C ATOM 299 C LYS 76 23.341 54.850 24.704 1.00 9.00 C ATOM 300 O LYS 76 22.549 54.167 25.354 1.00 9.00 O ATOM 301 N LEU 77 23.685 54.573 23.445 1.00 3.00 N ATOM 302 CA LEU 77 23.118 53.445 22.733 1.00 3.00 C ATOM 303 C LEU 77 23.870 52.136 22.936 1.00 3.00 C ATOM 304 O LEU 77 23.662 51.197 22.181 1.00 3.00 O ATOM 305 N THR 78 24.772 52.063 23.921 1.00 3.00 N ATOM 306 CA THR 78 25.500 50.828 24.173 1.00 3.00 C ATOM 307 C THR 78 24.590 49.900 24.952 1.00 3.00 C ATOM 308 O THR 78 23.712 50.350 25.664 1.00 3.00 O ATOM 309 N TYR 79 24.805 48.605 24.798 1.00 3.00 N ATOM 310 CA TYR 79 24.006 47.608 25.492 1.00 3.00 C ATOM 311 C TYR 79 22.847 48.063 26.365 1.00 3.00 C ATOM 312 O TYR 79 23.080 48.709 27.380 1.00 3.00 O ATOM 337 N LYS 86 9.471 41.841 35.589 1.00 3.00 N ATOM 338 CA LYS 86 8.898 43.026 36.218 1.00 3.00 C ATOM 339 C LYS 86 7.396 42.821 36.164 1.00 3.00 C ATOM 340 O LYS 86 6.846 42.441 35.129 1.00 3.00 O ATOM 341 N HIS 87 6.712 43.011 37.278 1.00 3.00 N ATOM 342 CA HIS 87 5.298 42.727 37.261 1.00 3.00 C ATOM 343 C HIS 87 4.479 44.009 37.124 1.00 3.00 C ATOM 344 O HIS 87 3.262 43.991 37.288 1.00 3.00 O ATOM 345 N LEU 88 5.138 45.122 36.814 1.00 3.00 N ATOM 346 CA LEU 88 4.417 46.357 36.586 1.00 3.00 C ATOM 347 C LEU 88 4.759 46.962 35.234 1.00 3.00 C ATOM 348 O LEU 88 5.814 46.643 34.664 1.00 3.00 O ATOM 349 N TYR 89 3.860 47.809 34.726 1.00 3.00 N ATOM 350 CA TYR 89 4.024 48.445 33.427 1.00 3.00 C ATOM 351 C TYR 89 4.324 49.911 33.359 1.00 3.00 C ATOM 352 O TYR 89 3.505 50.715 32.941 1.00 3.00 O ATOM 353 N PHE 90 5.524 50.295 33.808 1.00 3.00 N ATOM 354 CA PHE 90 5.906 51.690 33.874 1.00 3.00 C ATOM 355 C PHE 90 7.028 51.926 32.870 1.00 3.00 C ATOM 356 O PHE 90 7.995 51.168 32.860 1.00 3.00 O ATOM 357 N GLU 91 6.977 53.029 32.084 1.00 3.00 N ATOM 358 CA GLU 91 8.058 53.246 31.114 1.00 3.00 C ATOM 359 C GLU 91 9.350 53.395 31.842 1.00 3.00 C ATOM 360 O GLU 91 9.425 54.052 32.867 1.00 3.00 O ATOM 361 N SER 92 10.363 52.710 31.354 1.00 9.00 N ATOM 362 CA SER 92 11.638 52.789 32.006 1.00 9.00 C ATOM 363 C SER 92 11.962 51.429 32.563 1.00 9.00 C ATOM 364 O SER 92 13.156 51.102 32.764 1.00 9.00 O ATOM 365 N ASP 93 10.919 50.638 32.836 1.00 9.00 N ATOM 366 CA ASP 93 11.094 49.294 33.361 1.00 9.00 C ATOM 367 C ASP 93 11.359 48.311 32.267 1.00 9.00 C ATOM 368 O ASP 93 11.005 48.559 31.136 1.00 9.00 O ATOM 369 N ALA 94 11.859 47.111 32.603 1.00 9.00 N ATOM 370 CA ALA 94 12.142 46.189 31.503 1.00 9.00 C ATOM 371 C ALA 94 11.189 45.819 30.362 1.00 9.00 C ATOM 372 O ALA 94 11.711 45.560 29.280 1.00 9.00 O ATOM 373 N ALA 95 9.850 45.774 30.553 1.00 9.00 N ATOM 374 CA ALA 95 8.925 45.421 29.462 1.00 9.00 C ATOM 375 C ALA 95 8.687 46.590 28.561 1.00 9.00 C ATOM 376 O ALA 95 8.274 46.447 27.399 1.00 9.00 O ATOM 377 N THR 96 9.033 47.764 29.039 1.00 9.00 N ATOM 378 CA THR 96 8.894 48.980 28.240 1.00 9.00 C ATOM 379 C THR 96 9.977 49.919 28.667 1.00 9.00 C ATOM 380 O THR 96 9.724 50.934 29.290 1.00 9.00 O ATOM 381 N VAL 97 11.210 49.657 28.224 1.00 3.00 N ATOM 382 CA VAL 97 12.354 50.493 28.589 1.00 3.00 C ATOM 383 C VAL 97 12.504 51.862 27.997 1.00 3.00 C ATOM 384 O VAL 97 13.288 52.666 28.489 1.00 3.00 O ATOM 385 N ASN 98 11.683 52.206 27.027 1.00 3.00 N ATOM 386 CA ASN 98 11.917 53.464 26.376 1.00 3.00 C ATOM 387 C ASN 98 11.242 54.617 27.056 1.00 3.00 C ATOM 388 O ASN 98 10.056 54.859 26.900 1.00 3.00 O ATOM 389 N GLU 99 12.061 55.385 27.756 1.00 3.00 N ATOM 390 CA GLU 99 11.644 56.537 28.553 1.00 3.00 C ATOM 391 C GLU 99 13.023 56.322 29.184 1.00 3.00 C ATOM 392 O GLU 99 13.675 57.281 29.595 1.00 3.00 O ATOM 393 N ILE 100 13.416 55.061 29.207 1.00 3.00 N ATOM 394 CA ILE 100 14.694 54.620 29.718 1.00 3.00 C ATOM 395 C ILE 100 15.779 55.604 29.249 1.00 3.00 C ATOM 396 O ILE 100 16.530 56.114 30.094 1.00 3.00 O ATOM 397 N VAL 101 15.792 55.880 27.957 1.00 3.00 N ATOM 398 CA VAL 101 16.777 56.779 27.334 1.00 3.00 C ATOM 399 C VAL 101 16.716 58.263 27.676 1.00 3.00 C ATOM 400 O VAL 101 17.700 58.958 27.296 1.00 3.00 O ATOM 401 N LEU 102 15.690 58.723 28.376 1.00 3.00 N ATOM 402 CA LEU 102 15.653 60.117 28.766 1.00 3.00 C ATOM 403 C LEU 102 16.824 60.329 29.775 1.00 3.00 C ATOM 404 O LEU 102 17.322 61.464 29.900 1.00 3.00 O ATOM 405 N LYS 103 17.146 59.222 30.474 1.00 3.00 N ATOM 406 CA LYS 103 18.227 59.305 31.477 1.00 3.00 C ATOM 407 C LYS 103 19.548 59.503 30.806 1.00 3.00 C ATOM 408 O LYS 103 20.497 59.838 31.527 1.00 3.00 O ATOM 409 N VAL 104 19.709 59.237 29.493 1.00 3.00 N ATOM 410 CA VAL 104 20.993 59.456 28.866 1.00 3.00 C ATOM 411 C VAL 104 20.945 60.916 29.079 1.00 3.00 C ATOM 412 O VAL 104 21.890 61.656 28.959 1.00 3.00 O ATOM 413 N ASN 105 19.761 61.428 29.365 1.00 3.00 N ATOM 414 CA ASN 105 19.748 62.803 29.705 1.00 3.00 C ATOM 415 C ASN 105 20.453 63.171 31.048 1.00 3.00 C ATOM 416 O ASN 105 20.997 64.301 31.194 1.00 3.00 O ATOM 417 N TYR 106 20.420 62.258 32.028 1.00 3.00 N ATOM 418 CA TYR 106 21.156 62.462 33.275 1.00 3.00 C ATOM 419 C TYR 106 22.395 63.203 33.754 1.00 3.00 C ATOM 420 O TYR 106 22.297 64.138 34.547 1.00 3.00 O ATOM 421 N ILE 107 23.549 62.760 33.281 1.00 3.00 N ATOM 422 CA ILE 107 24.811 63.411 33.595 1.00 3.00 C ATOM 423 C ILE 107 25.265 63.926 32.244 1.00 3.00 C ATOM 424 O ILE 107 25.796 63.178 31.424 1.00 3.00 O ATOM 425 N LEU 108 25.041 65.213 32.009 1.00 3.00 N ATOM 426 CA LEU 108 25.389 65.809 30.743 1.00 3.00 C ATOM 427 C LEU 108 26.797 66.375 30.679 1.00 3.00 C ATOM 428 O LEU 108 27.357 66.799 31.687 1.00 3.00 O ATOM 429 N GLU 109 27.338 66.383 29.467 1.00 9.00 N ATOM 430 CA GLU 109 28.663 66.911 29.213 1.00 9.00 C ATOM 431 C GLU 109 28.517 67.945 28.088 1.00 9.00 C ATOM 432 O GLU 109 28.066 67.598 27.005 1.00 9.00 O ATOM 433 N SER 110 28.874 69.195 28.355 1.00 9.00 N ATOM 434 CA SER 110 28.802 70.227 27.319 1.00 9.00 C ATOM 435 C SER 110 29.552 71.471 27.774 1.00 9.00 C ATOM 436 O SER 110 30.035 71.513 28.905 1.00 9.00 O ATOM 437 N ARG 111 29.654 72.461 26.905 1.00 9.00 N ATOM 438 CA ARG 111 30.378 73.686 27.244 1.00 9.00 C ATOM 439 C ARG 111 29.603 74.539 28.240 1.00 9.00 C ATOM 440 O ARG 111 30.181 75.394 28.906 1.00 9.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 284 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 78.96 41.6 77 55.0 140 ARMSMC SECONDARY STRUCTURE . . 75.15 47.2 36 40.9 88 ARMSMC SURFACE . . . . . . . . 77.78 49.0 51 55.4 92 ARMSMC BURIED . . . . . . . . 81.22 26.9 26 54.2 48 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 63 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 58 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 39 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 42 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 21 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 43 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 31 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 28 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 30 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 13 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 16 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 15 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 11 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 13 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 6 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 3 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 5 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 1 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 18.03 (Number of atoms: 71) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 18.03 71 100.0 71 CRMSCA CRN = ALL/NP . . . . . 0.2540 CRMSCA SECONDARY STRUCTURE . . 16.08 44 100.0 44 CRMSCA SURFACE . . . . . . . . 18.31 47 100.0 47 CRMSCA BURIED . . . . . . . . 17.48 24 100.0 24 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 17.97 284 80.5 353 CRMSMC SECONDARY STRUCTURE . . 16.09 176 80.4 219 CRMSMC SURFACE . . . . . . . . 18.29 188 80.0 235 CRMSMC BURIED . . . . . . . . 17.31 96 81.4 118 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 0.00 0 0.0 282 CRMSSC RELIABLE SIDE CHAINS . 0.00 0 0.0 238 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 176 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 196 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 86 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 17.97 284 50.2 566 CRMSALL SECONDARY STRUCTURE . . 16.09 176 50.0 352 CRMSALL SURFACE . . . . . . . . 18.29 188 49.0 384 CRMSALL BURIED . . . . . . . . 17.31 96 52.7 182 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 12.352 0.562 0.303 71 100.0 71 ERRCA SECONDARY STRUCTURE . . 10.541 0.526 0.283 44 100.0 44 ERRCA SURFACE . . . . . . . . 12.581 0.557 0.304 47 100.0 47 ERRCA BURIED . . . . . . . . 11.904 0.572 0.301 24 100.0 24 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 12.307 0.560 0.302 284 80.5 353 ERRMC SECONDARY STRUCTURE . . 10.540 0.521 0.283 176 80.4 219 ERRMC SURFACE . . . . . . . . 12.593 0.560 0.308 188 80.0 235 ERRMC BURIED . . . . . . . . 11.747 0.560 0.290 96 81.4 118 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.000 0.000 0.000 0 0.0 282 ERRSC RELIABLE SIDE CHAINS . 0.000 0.000 0.000 0 0.0 238 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 176 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 196 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 86 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 12.307 0.560 0.302 284 50.2 566 ERRALL SECONDARY STRUCTURE . . 10.540 0.521 0.283 176 50.0 352 ERRALL SURFACE . . . . . . . . 12.593 0.560 0.308 188 49.0 384 ERRALL BURIED . . . . . . . . 11.747 0.560 0.290 96 52.7 182 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 1 1 2 6 28 71 71 DISTCA CA (P) 1.41 1.41 2.82 8.45 39.44 71 DISTCA CA (RMS) 0.64 0.64 1.54 3.42 6.81 DISTCA ALL (N) 2 4 7 27 108 284 566 DISTALL ALL (P) 0.35 0.71 1.24 4.77 19.08 566 DISTALL ALL (RMS) 0.52 1.08 1.65 3.58 6.63 DISTALL END of the results output