####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 89 ( 740), selected 89 , name T0608TS307_1-D1 # Molecule2: number of CA atoms 89 ( 739), selected 89 , name T0608-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0608TS307_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 86 - 108 4.98 20.68 LCS_AVERAGE: 22.24 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 36 - 43 1.98 31.73 LONGEST_CONTINUOUS_SEGMENT: 8 46 - 53 1.85 24.44 LONGEST_CONTINUOUS_SEGMENT: 8 79 - 86 1.97 20.45 LCS_AVERAGE: 6.78 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 6 47 - 52 0.87 25.74 LCS_AVERAGE: 4.58 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 89 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT V 29 V 29 3 5 19 0 3 5 5 5 5 5 7 7 8 9 10 17 19 22 25 26 30 35 36 LCS_GDT S 30 S 30 3 5 22 3 3 4 4 4 5 8 8 11 16 19 21 23 26 30 33 35 37 39 41 LCS_GDT G 31 G 31 3 5 22 3 3 4 5 7 8 8 10 13 17 19 23 27 30 32 37 39 41 41 43 LCS_GDT F 32 F 32 3 5 22 3 3 4 4 7 8 13 16 18 20 26 28 32 34 36 39 39 41 41 43 LCS_GDT Q 33 Q 33 3 6 22 3 3 4 5 7 8 9 10 16 20 22 23 27 30 32 37 39 41 41 43 LCS_GDT R 34 R 34 5 6 22 4 5 5 6 6 7 10 11 14 20 22 24 32 34 36 39 39 41 41 43 LCS_GDT L 35 L 35 5 6 22 4 5 5 6 10 12 14 16 18 21 26 28 32 34 36 39 39 41 41 43 LCS_GDT Q 36 Q 36 5 8 22 4 5 5 7 10 12 14 16 18 20 26 28 32 34 36 39 39 41 41 43 LCS_GDT K 37 K 37 5 8 22 4 5 5 6 7 8 11 14 18 21 26 28 32 34 36 39 39 41 41 43 LCS_GDT P 38 P 38 5 8 22 4 5 5 6 7 8 11 15 18 22 25 28 32 34 36 39 39 41 41 43 LCS_GDT V 39 V 39 4 8 22 4 4 5 6 7 8 9 12 15 18 23 28 32 33 36 39 39 41 41 43 LCS_GDT V 40 V 40 4 8 22 4 4 5 6 7 8 9 10 14 16 18 21 23 28 34 35 37 39 41 43 LCS_GDT S 41 S 41 4 8 22 3 4 4 5 6 8 10 12 15 20 24 28 32 33 36 39 39 41 41 43 LCS_GDT Q 42 Q 42 4 8 22 3 4 5 6 6 9 12 15 18 22 26 28 32 34 36 39 39 41 41 43 LCS_GDT P 43 P 43 4 8 22 3 4 5 6 7 9 11 16 18 22 26 28 32 34 36 39 39 41 41 43 LCS_GDT D 44 D 44 3 5 22 3 3 4 5 7 9 14 16 18 22 26 28 32 34 36 39 39 41 41 43 LCS_GDT F 45 F 45 3 4 22 3 3 4 4 10 12 14 16 18 22 26 28 32 34 36 39 39 41 41 43 LCS_GDT R 46 R 46 4 8 22 3 3 6 7 10 12 14 16 18 22 26 28 32 34 36 39 39 41 41 43 LCS_GDT R 47 R 47 6 8 22 3 4 6 7 7 11 14 16 18 22 26 28 32 34 36 39 39 41 41 43 LCS_GDT Q 48 Q 48 6 8 22 3 4 6 7 10 12 14 16 18 22 26 28 32 34 36 39 39 41 41 43 LCS_GDT P 49 P 49 6 8 22 4 4 6 7 7 10 10 15 18 22 26 28 32 34 36 39 39 41 41 43 LCS_GDT V 50 V 50 6 8 22 4 4 6 7 10 12 14 16 18 22 26 28 32 34 36 39 39 41 41 43 LCS_GDT S 51 S 51 6 8 22 4 4 6 7 10 12 14 16 18 22 26 28 32 34 36 39 39 41 41 43 LCS_GDT E 52 E 52 6 8 22 4 4 6 7 8 12 14 16 18 22 26 28 32 34 36 39 39 41 41 43 LCS_GDT T 53 T 53 4 8 22 3 4 5 7 10 12 14 16 18 22 26 28 32 34 36 39 39 41 41 43 LCS_GDT M 54 M 54 4 5 21 3 4 4 6 6 10 13 15 18 22 26 28 32 34 36 39 39 41 41 43 LCS_GDT Q 55 Q 55 4 6 21 3 4 5 5 7 8 10 15 18 22 24 28 32 34 36 39 39 41 41 43 LCS_GDT V 56 V 56 4 6 20 3 4 4 5 7 8 8 10 13 18 24 28 32 34 36 39 39 41 41 43 LCS_GDT Y 57 Y 57 4 6 20 3 4 4 5 7 8 8 12 15 18 21 26 30 34 36 39 39 41 41 43 LCS_GDT L 58 L 58 4 6 19 3 4 4 5 7 8 8 11 15 16 21 23 30 33 34 39 39 41 41 43 LCS_GDT K 59 K 59 4 6 16 3 4 4 5 7 8 8 10 12 16 17 18 21 22 24 30 31 33 39 41 LCS_GDT Q 60 Q 60 4 6 16 3 4 4 5 7 8 8 10 11 14 14 17 21 22 24 26 28 30 37 40 LCS_GDT A 61 A 61 4 6 16 3 4 4 5 7 8 8 10 11 14 14 18 21 25 27 30 33 36 39 43 LCS_GDT A 62 A 62 4 5 16 3 3 4 5 7 8 8 10 11 14 14 18 21 25 27 31 33 36 39 43 LCS_GDT D 63 D 63 3 5 16 3 4 4 4 6 8 8 10 12 14 16 18 21 26 30 32 33 37 39 43 LCS_GDT P 64 P 64 3 5 16 3 3 4 6 6 6 7 7 11 13 13 18 21 26 30 32 33 37 39 43 LCS_GDT G 65 G 65 3 5 16 3 3 4 6 6 6 7 8 9 11 12 16 19 26 30 32 33 37 38 41 LCS_GDT R 66 R 66 3 4 16 3 3 3 6 6 8 8 9 11 13 15 18 21 26 30 32 33 37 38 43 LCS_GDT D 67 D 67 3 4 14 3 3 3 4 4 5 6 8 10 13 16 18 18 20 24 29 31 33 36 40 LCS_GDT V 68 V 68 4 4 14 3 3 4 4 6 7 10 11 13 15 17 20 22 24 28 28 31 33 35 40 LCS_GDT G 69 G 69 4 5 14 3 3 4 4 6 6 7 9 10 12 15 17 18 19 25 28 31 33 35 37 LCS_GDT L 70 L 70 4 5 14 3 3 4 4 4 5 6 8 10 12 13 13 18 19 20 22 24 27 31 36 LCS_GDT Y 71 Y 71 4 5 14 3 3 4 4 5 6 7 10 10 12 13 14 18 20 24 25 28 33 35 37 LCS_GDT W 72 W 72 3 5 14 3 3 3 5 5 6 7 8 10 12 13 14 18 20 21 24 27 33 35 37 LCS_GDT M 73 M 73 4 5 14 4 4 4 5 6 7 8 9 10 13 13 15 21 27 30 31 35 37 39 41 LCS_GDT A 74 A 74 4 5 14 4 4 4 5 6 7 8 9 10 13 13 13 16 19 21 24 28 31 34 36 LCS_GDT T 75 T 75 4 5 14 4 4 4 5 6 7 8 9 10 13 13 13 16 21 25 28 32 34 37 39 LCS_GDT D 76 D 76 4 5 16 4 4 4 5 6 7 8 12 15 19 23 28 32 34 36 39 39 41 41 43 LCS_GDT F 77 F 77 3 5 16 3 3 4 5 6 7 11 15 18 22 26 28 32 34 36 39 39 41 41 43 LCS_GDT E 78 E 78 3 5 18 3 3 4 4 6 8 10 12 15 19 26 28 32 34 36 39 39 41 41 43 LCS_GDT N 79 N 79 4 8 20 3 3 4 6 7 9 10 11 14 20 22 23 28 33 36 39 39 41 41 43 LCS_GDT R 80 R 80 4 8 20 3 4 4 6 7 8 10 11 14 16 17 19 20 23 25 31 32 35 37 41 LCS_GDT R 81 R 81 4 8 20 3 4 4 6 7 8 10 11 14 16 18 19 22 25 29 29 32 35 39 41 LCS_GDT F 82 F 82 4 8 20 3 4 4 5 7 8 10 13 15 17 18 20 22 26 30 32 33 35 38 41 LCS_GDT P 83 P 83 4 8 20 3 4 4 6 7 8 10 13 15 17 18 20 23 26 30 32 33 35 38 41 LCS_GDT G 84 G 84 3 8 20 3 3 4 5 7 8 10 13 15 17 18 20 22 27 30 33 35 37 41 43 LCS_GDT K 85 K 85 3 8 20 3 3 4 6 7 8 10 13 15 19 22 23 27 30 32 35 37 40 41 43 LCS_GDT V 86 V 86 3 8 23 3 3 4 6 8 12 14 16 18 20 25 28 32 34 36 39 39 41 41 43 LCS_GDT S 87 S 87 3 7 23 3 4 4 7 10 12 14 16 18 21 26 28 32 34 36 39 39 41 41 43 LCS_GDT P 88 P 88 5 7 23 3 5 5 5 7 9 11 15 18 22 26 28 32 34 36 39 39 41 41 43 LCS_GDT S 89 S 89 5 7 23 3 5 5 5 7 7 10 13 15 20 26 28 32 34 36 39 39 41 41 43 LCS_GDT G 90 G 90 5 7 23 3 5 5 7 10 12 14 16 18 21 26 28 32 34 36 39 39 41 41 43 LCS_GDT F 91 F 91 5 7 23 3 5 5 5 7 7 8 10 18 22 26 28 32 34 36 39 39 41 41 43 LCS_GDT Q 92 Q 92 5 7 23 4 5 5 5 7 9 12 15 18 22 25 28 32 34 36 39 39 41 41 43 LCS_GDT K 93 K 93 4 7 23 4 4 4 5 6 9 12 15 18 22 26 28 32 34 36 39 39 41 41 43 LCS_GDT L 94 L 94 4 4 23 4 4 4 5 6 9 12 15 18 22 26 28 32 34 36 39 39 41 41 43 LCS_GDT Y 95 Y 95 4 4 23 4 4 4 5 5 7 11 14 16 22 24 28 30 34 36 39 39 41 41 43 LCS_GDT R 96 R 96 4 4 23 3 3 4 6 6 8 9 12 13 15 18 20 22 26 30 33 37 38 39 43 LCS_GDT Q 97 Q 97 4 4 23 3 3 4 6 7 8 10 12 14 15 18 20 22 26 30 32 37 38 39 43 LCS_GDT W 98 W 98 3 3 23 3 3 4 6 6 6 9 12 14 15 18 20 22 26 30 32 34 38 39 43 LCS_GDT R 99 R 99 5 5 23 4 4 5 5 6 8 10 12 13 15 18 20 22 26 30 32 33 37 39 43 LCS_GDT N 100 N 100 5 6 23 4 4 5 5 6 8 10 12 14 15 18 20 22 26 30 32 33 37 39 43 LCS_GDT Q 101 Q 101 5 6 23 4 4 5 5 6 8 10 12 13 15 18 20 22 26 30 32 33 37 39 43 LCS_GDT T 102 T 102 5 6 23 4 4 5 5 6 8 10 12 13 15 18 20 22 24 30 32 33 37 39 43 LCS_GDT G 103 G 103 5 6 23 3 4 5 5 6 7 10 12 13 15 18 20 22 26 30 32 33 37 39 43 LCS_GDT W 104 W 104 3 6 23 3 3 3 4 6 6 7 9 12 13 14 17 19 25 29 32 33 37 39 43 LCS_GDT D 105 D 105 3 6 23 3 3 5 5 6 7 10 13 15 17 18 20 22 26 30 32 33 37 39 43 LCS_GDT A 106 A 106 4 5 23 3 4 4 5 7 8 10 13 15 17 18 20 22 26 30 32 33 37 39 43 LCS_GDT Y 107 Y 107 4 4 23 3 4 4 5 7 8 10 13 15 17 18 20 22 26 30 32 33 37 39 43 LCS_GDT V 108 V 108 4 4 23 3 4 4 4 6 7 10 12 14 14 18 20 22 25 27 29 33 36 39 43 LCS_GDT Q 109 Q 109 4 4 21 3 4 4 5 6 8 10 12 14 15 18 20 22 26 30 32 33 37 39 43 LCS_GDT S 110 S 110 3 4 19 3 3 4 5 7 7 10 13 15 17 18 20 22 26 30 32 33 37 39 43 LCS_GDT C 111 C 111 3 3 17 3 3 4 5 6 8 10 13 15 17 18 20 22 26 30 32 33 37 39 43 LCS_GDT R 112 R 112 5 6 14 3 5 5 5 7 8 10 13 15 17 18 20 22 25 30 32 33 37 39 43 LCS_GDT A 113 A 113 5 6 14 3 5 5 5 5 6 8 13 15 17 18 20 22 25 28 28 32 37 38 43 LCS_GDT I 114 I 114 5 6 14 3 5 5 5 6 8 9 13 15 17 18 20 22 25 28 28 31 33 35 40 LCS_GDT W 115 W 115 5 6 14 3 5 5 5 5 7 10 12 14 15 18 20 22 25 28 28 31 33 35 37 LCS_GDT N 116 N 116 5 6 14 3 5 5 6 6 7 10 11 13 15 17 20 22 25 28 29 31 33 36 40 LCS_GDT D 117 D 117 3 6 14 3 3 5 5 6 7 10 11 13 15 17 20 22 25 28 28 31 33 35 38 LCS_AVERAGE LCS_A: 11.20 ( 4.58 6.78 22.24 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 5 6 7 10 12 14 16 18 22 26 28 32 34 36 39 39 41 41 43 GDT PERCENT_AT 4.49 5.62 6.74 7.87 11.24 13.48 15.73 17.98 20.22 24.72 29.21 31.46 35.96 38.20 40.45 43.82 43.82 46.07 46.07 48.31 GDT RMS_LOCAL 0.07 0.48 0.87 1.21 1.86 2.07 2.41 2.71 2.92 3.58 4.02 4.18 4.55 4.80 5.00 5.29 5.29 5.61 5.61 5.98 GDT RMS_ALL_AT 31.70 15.67 25.74 24.93 17.33 17.40 17.52 17.58 17.48 15.95 16.83 16.76 16.81 16.44 16.48 16.39 16.39 16.60 16.60 16.53 # Checking swapping # possible swapping detected: Y 57 Y 57 # possible swapping detected: D 63 D 63 # possible swapping detected: Y 95 Y 95 # possible swapping detected: D 117 D 117 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA V 29 V 29 18.116 0 0.620 0.965 20.443 0.000 0.000 LGA S 30 S 30 10.733 0 0.220 0.339 13.429 0.238 0.238 LGA G 31 G 31 8.030 0 0.249 0.249 8.746 10.476 10.476 LGA F 32 F 32 3.594 0 0.548 0.474 5.677 34.524 34.589 LGA Q 33 Q 33 6.138 0 0.332 1.041 14.294 22.738 10.423 LGA R 34 R 34 5.349 0 0.608 0.582 18.701 31.786 12.251 LGA L 35 L 35 2.618 0 0.164 0.417 8.300 56.786 37.321 LGA Q 36 Q 36 1.954 0 0.156 1.601 7.313 75.000 45.450 LGA K 37 K 37 5.511 0 0.412 0.841 9.152 22.143 13.333 LGA P 38 P 38 10.579 0 0.075 0.361 12.520 2.024 1.224 LGA V 39 V 39 10.641 0 0.597 1.319 13.369 0.000 0.000 LGA V 40 V 40 14.272 0 0.517 1.349 17.986 0.000 0.000 LGA S 41 S 41 9.894 0 0.403 0.462 11.681 5.952 3.968 LGA Q 42 Q 42 4.521 0 0.684 0.953 6.709 29.762 33.069 LGA P 43 P 43 4.124 0 0.554 0.799 5.076 35.952 37.415 LGA D 44 D 44 3.440 0 0.294 0.975 3.440 50.000 53.631 LGA F 45 F 45 2.485 0 0.565 0.616 3.503 59.524 66.667 LGA R 46 R 46 2.006 0 0.483 1.349 7.584 65.595 37.013 LGA R 47 R 47 3.538 0 0.658 1.123 14.125 55.595 22.814 LGA Q 48 Q 48 2.834 0 0.348 0.515 6.815 67.024 42.963 LGA P 49 P 49 4.879 0 0.107 0.181 8.849 34.524 23.061 LGA V 50 V 50 1.266 0 0.240 0.340 5.077 73.214 57.211 LGA S 51 S 51 2.973 0 0.218 0.233 6.444 63.214 48.571 LGA E 52 E 52 2.904 0 0.678 0.720 6.885 56.429 38.307 LGA T 53 T 53 1.678 0 0.630 0.586 4.452 60.000 57.755 LGA M 54 M 54 4.345 0 0.407 1.246 9.299 40.238 25.893 LGA Q 55 Q 55 7.327 0 0.591 1.129 12.424 8.690 3.915 LGA V 56 V 56 8.215 0 0.047 1.017 10.835 5.238 5.714 LGA Y 57 Y 57 8.188 0 0.125 1.386 10.814 4.048 10.079 LGA L 58 L 58 9.992 0 0.622 1.354 13.232 0.833 4.286 LGA K 59 K 59 16.313 0 0.462 0.628 19.761 0.000 0.000 LGA Q 60 Q 60 20.864 0 0.623 1.095 23.446 0.000 0.000 LGA A 61 A 61 20.701 0 0.455 0.452 21.803 0.000 0.000 LGA A 62 A 62 24.726 0 0.541 0.581 26.324 0.000 0.000 LGA D 63 D 63 24.555 0 0.604 0.978 26.183 0.000 0.000 LGA P 64 P 64 22.520 0 0.654 0.628 22.701 0.000 0.000 LGA G 65 G 65 23.010 0 0.596 0.596 23.235 0.000 0.000 LGA R 66 R 66 22.065 0 0.145 1.204 29.250 0.000 0.000 LGA D 67 D 67 24.535 0 0.032 1.332 29.552 0.000 0.000 LGA V 68 V 68 22.554 0 0.324 0.970 24.646 0.000 0.000 LGA G 69 G 69 23.867 0 0.634 0.634 23.867 0.000 0.000 LGA L 70 L 70 25.507 0 0.457 0.434 30.860 0.000 0.000 LGA Y 71 Y 71 23.648 0 0.100 1.313 29.338 0.000 0.000 LGA W 72 W 72 19.872 0 0.320 1.217 28.103 0.000 0.000 LGA M 73 M 73 15.998 0 0.216 1.406 17.546 0.000 0.000 LGA A 74 A 74 19.316 0 0.668 0.599 22.266 0.000 0.000 LGA T 75 T 75 15.527 0 0.089 1.061 17.638 0.000 0.000 LGA D 76 D 76 8.783 0 0.571 1.256 11.508 6.548 4.226 LGA F 77 F 77 6.616 0 0.080 0.269 12.802 22.500 9.913 LGA E 78 E 78 6.046 0 0.327 1.092 14.427 15.714 7.513 LGA N 79 N 79 6.086 0 0.675 0.993 8.552 16.071 23.095 LGA R 80 R 80 10.764 0 0.165 1.342 19.103 0.357 0.130 LGA R 81 R 81 10.975 0 0.310 1.047 13.029 0.000 0.000 LGA F 82 F 82 11.947 0 0.085 0.212 13.687 0.000 0.000 LGA P 83 P 83 12.716 0 0.629 0.746 14.715 0.000 0.000 LGA G 84 G 84 10.278 0 0.383 0.383 10.279 2.500 2.500 LGA K 85 K 85 7.905 1 0.437 1.078 15.406 13.214 5.926 LGA V 86 V 86 2.655 0 0.263 0.965 4.562 58.690 61.769 LGA S 87 S 87 1.499 0 0.579 0.772 4.036 65.119 60.397 LGA P 88 P 88 6.493 0 0.321 0.573 8.900 18.929 14.082 LGA S 89 S 89 6.486 0 0.109 0.132 7.458 22.857 19.762 LGA G 90 G 90 1.719 0 0.632 0.632 4.416 54.524 54.524 LGA F 91 F 91 8.238 0 0.394 1.006 14.218 6.905 2.511 LGA Q 92 Q 92 11.472 0 0.575 1.363 15.783 0.357 0.159 LGA K 93 K 93 10.009 0 0.062 0.867 10.989 0.119 0.476 LGA L 94 L 94 10.752 0 0.643 1.347 12.192 0.000 0.000 LGA Y 95 Y 95 11.696 0 0.280 1.261 14.920 0.000 0.000 LGA R 96 R 96 16.072 0 0.454 1.517 18.587 0.000 0.000 LGA Q 97 Q 97 16.871 0 0.581 1.039 18.654 0.000 0.000 LGA W 98 W 98 18.648 0 0.189 0.958 22.102 0.000 0.000 LGA R 99 R 99 25.045 0 0.569 0.875 30.450 0.000 0.000 LGA N 100 N 100 29.474 0 0.107 0.845 32.366 0.000 0.000 LGA Q 101 Q 101 30.765 0 0.555 1.332 33.507 0.000 0.000 LGA T 102 T 102 33.776 0 0.372 1.034 37.735 0.000 0.000 LGA G 103 G 103 34.224 0 0.444 0.444 34.563 0.000 0.000 LGA W 104 W 104 32.118 0 0.277 1.677 35.481 0.000 0.000 LGA D 105 D 105 31.064 0 0.506 0.904 32.950 0.000 0.000 LGA A 106 A 106 26.806 0 0.643 0.605 28.541 0.000 0.000 LGA Y 107 Y 107 20.624 0 0.611 1.116 22.693 0.000 0.000 LGA V 108 V 108 20.317 0 0.452 1.253 21.414 0.000 0.000 LGA Q 109 Q 109 24.168 0 0.417 1.168 29.870 0.000 0.000 LGA S 110 S 110 19.945 0 0.618 0.898 21.361 0.000 0.000 LGA C 111 C 111 21.529 0 0.609 0.567 22.579 0.000 0.000 LGA R 112 R 112 25.648 0 0.659 0.919 30.212 0.000 0.000 LGA A 113 A 113 27.174 0 0.134 0.146 29.379 0.000 0.000 LGA I 114 I 114 28.843 0 0.371 0.356 29.428 0.000 0.000 LGA W 115 W 115 29.723 0 0.233 1.174 33.395 0.000 0.000 LGA N 116 N 116 33.078 0 0.469 1.142 37.594 0.000 0.000 LGA D 117 D 117 38.522 0 0.563 1.373 41.708 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 89 356 356 100.00 739 739 100.00 89 SUMMARY(RMSD_GDC): 14.293 14.240 14.994 14.337 11.288 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 89 89 4.0 16 2.71 18.820 15.868 0.570 LGA_LOCAL RMSD: 2.706 Number of atoms: 16 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 17.577 Number of assigned atoms: 89 Std_ASGN_ATOMS RMSD: 14.293 Standard rmsd on all 89 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.676032 * X + 0.494167 * Y + 0.546607 * Z + 2.025124 Y_new = 0.716225 * X + -0.266295 * Y + -0.645065 * Z + 14.199998 Z_new = -0.173211 * X + 0.827578 * Y + -0.533959 * Z + 63.453815 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.814259 0.174089 2.143794 [DEG: 46.6536 9.9746 122.8304 ] ZXZ: 0.702964 2.134072 -0.206320 [DEG: 40.2769 122.2733 -11.8213 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0608TS307_1-D1 REMARK 2: T0608-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0608TS307_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 89 89 4.0 16 2.71 15.868 14.29 REMARK ---------------------------------------------------------- MOLECULE T0608TS307_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0608 REMARK MODEL 1 REMARK PARENT 2gu1_A ATOM 229 N VAL 29 18.013 33.500 22.450 1.00 0.00 N ATOM 230 CA VAL 29 18.582 33.240 23.762 1.00 0.00 C ATOM 231 C VAL 29 19.152 34.459 24.472 1.00 0.00 C ATOM 232 O VAL 29 18.766 34.653 25.629 1.00 0.00 O ATOM 233 CB VAL 29 19.471 32.021 23.775 1.00 0.00 C ATOM 234 CG1 VAL 29 18.828 30.869 23.027 1.00 0.00 C ATOM 235 CG2 VAL 29 20.792 32.330 23.028 1.00 0.00 C ATOM 236 N SER 30 20.150 35.148 23.884 1.00 0.00 N ATOM 237 CA SER 30 20.638 36.321 24.476 1.00 0.00 C ATOM 238 C SER 30 19.875 37.478 23.774 1.00 0.00 C ATOM 239 O SER 30 20.160 37.833 22.609 1.00 0.00 O ATOM 240 CB SER 30 22.091 36.499 24.196 1.00 0.00 C ATOM 241 OG SER 30 22.706 35.855 23.142 1.00 0.00 O ATOM 242 N GLY 31 18.889 37.995 24.420 1.00 0.00 N ATOM 243 CA GLY 31 17.988 39.012 23.900 1.00 0.00 C ATOM 244 C GLY 31 18.552 40.448 23.820 1.00 0.00 C ATOM 245 O GLY 31 17.776 41.298 23.371 1.00 0.00 O ATOM 246 N PHE 32 19.716 40.792 24.436 1.00 0.00 N ATOM 247 CA PHE 32 20.208 42.195 24.386 1.00 0.00 C ATOM 248 C PHE 32 20.995 42.543 23.083 1.00 0.00 C ATOM 249 O PHE 32 22.223 42.465 23.019 1.00 0.00 O ATOM 250 CB PHE 32 21.096 42.521 25.591 1.00 0.00 C ATOM 251 CG PHE 32 21.555 43.948 25.647 1.00 0.00 C ATOM 252 CD1 PHE 32 20.655 44.926 26.094 1.00 0.00 C ATOM 253 CD2 PHE 32 22.750 44.319 25.060 1.00 0.00 C ATOM 254 CE1 PHE 32 20.988 46.277 26.036 1.00 0.00 C ATOM 255 CE2 PHE 32 23.158 45.652 25.009 1.00 0.00 C ATOM 256 CZ PHE 32 22.264 46.613 25.495 1.00 0.00 C ATOM 257 N GLN 33 20.202 42.692 22.030 1.00 0.00 N ATOM 258 CA GLN 33 20.616 43.027 20.662 1.00 0.00 C ATOM 259 C GLN 33 19.982 44.325 20.082 1.00 0.00 C ATOM 260 O GLN 33 19.879 44.417 18.836 1.00 0.00 O ATOM 261 CB GLN 33 20.219 41.815 19.814 1.00 0.00 C ATOM 262 CG GLN 33 18.707 41.554 19.722 1.00 0.00 C ATOM 263 CD GLN 33 18.290 40.635 18.593 1.00 0.00 C ATOM 264 OE1 GLN 33 17.886 39.473 18.801 1.00 0.00 O ATOM 265 NE2 GLN 33 18.412 41.164 17.377 1.00 0.00 N ATOM 266 N ARG 34 19.357 45.217 20.886 1.00 0.00 N ATOM 267 CA ARG 34 18.735 46.332 20.252 1.00 0.00 C ATOM 268 C ARG 34 19.674 47.545 20.157 1.00 0.00 C ATOM 269 O ARG 34 19.946 48.145 21.242 1.00 0.00 O ATOM 270 CB ARG 34 17.418 46.649 21.014 1.00 0.00 C ATOM 271 CG ARG 34 16.319 45.636 20.649 1.00 0.00 C ATOM 272 CD ARG 34 15.103 45.750 21.461 1.00 0.00 C ATOM 273 NE ARG 34 13.928 45.066 20.916 1.00 0.00 N ATOM 274 CZ ARG 34 12.654 45.337 21.218 1.00 0.00 C ATOM 275 NH1 ARG 34 12.310 46.273 22.114 1.00 0.00 H ATOM 276 NH2 ARG 34 11.618 44.745 20.616 1.00 0.00 H ATOM 277 N LEU 35 20.410 47.558 19.097 1.00 0.00 N ATOM 278 CA LEU 35 21.343 48.648 18.679 1.00 0.00 C ATOM 279 C LEU 35 20.590 49.941 18.237 1.00 0.00 C ATOM 280 O LEU 35 20.998 50.974 18.721 1.00 0.00 O ATOM 281 CB LEU 35 22.228 48.172 17.502 1.00 0.00 C ATOM 282 CG LEU 35 23.161 49.259 16.919 1.00 0.00 C ATOM 283 CD1 LEU 35 24.609 48.872 17.128 1.00 0.00 C ATOM 284 CD2 LEU 35 22.851 49.440 15.444 1.00 0.00 C ATOM 285 N GLN 36 19.588 49.843 17.333 1.00 0.00 N ATOM 286 CA GLN 36 18.885 50.970 16.775 1.00 0.00 C ATOM 287 C GLN 36 18.519 52.042 17.878 1.00 0.00 C ATOM 288 O GLN 36 18.663 53.236 17.584 1.00 0.00 O ATOM 289 CB GLN 36 17.651 50.454 16.069 1.00 0.00 C ATOM 290 CG GLN 36 16.833 51.500 15.339 1.00 0.00 C ATOM 291 CD GLN 36 15.374 51.108 15.349 1.00 0.00 C ATOM 292 OE1 GLN 36 15.105 49.962 14.994 1.00 0.00 O ATOM 293 NE2 GLN 36 14.516 52.009 15.840 1.00 0.00 N ATOM 294 N LYS 37 18.148 51.636 19.128 1.00 0.00 N ATOM 295 CA LYS 37 17.832 52.527 20.244 1.00 0.00 C ATOM 296 C LYS 37 19.022 53.316 20.683 1.00 0.00 C ATOM 297 O LYS 37 19.175 54.374 20.042 1.00 0.00 O ATOM 298 CB LYS 37 17.159 51.820 21.386 1.00 0.00 C ATOM 299 CG LYS 37 15.932 51.003 20.987 1.00 0.00 C ATOM 300 CD LYS 37 14.851 51.951 20.492 1.00 0.00 C ATOM 301 CE LYS 37 13.562 51.235 20.125 1.00 0.00 C ATOM 302 NZ LYS 37 12.554 52.240 19.677 1.00 0.00 N ATOM 303 N PRO 38 19.971 52.957 21.653 1.00 0.00 N ATOM 304 CA PRO 38 21.098 53.879 21.730 1.00 0.00 C ATOM 305 C PRO 38 21.782 53.986 20.338 1.00 0.00 C ATOM 306 O PRO 38 22.263 52.986 19.806 1.00 0.00 O ATOM 307 CB PRO 38 22.059 53.448 22.854 1.00 0.00 C ATOM 308 CG PRO 38 21.782 51.938 22.908 1.00 0.00 C ATOM 309 CD PRO 38 20.373 51.668 22.395 1.00 0.00 C ATOM 310 N VAL 39 22.173 55.191 20.028 1.00 0.00 N ATOM 311 CA VAL 39 22.876 55.547 18.853 1.00 0.00 C ATOM 312 C VAL 39 24.212 56.179 19.219 1.00 0.00 C ATOM 313 O VAL 39 24.267 57.335 19.623 1.00 0.00 O ATOM 314 CB VAL 39 22.030 56.413 17.894 1.00 0.00 C ATOM 315 CG1 VAL 39 20.806 56.963 18.536 1.00 0.00 C ATOM 316 CG2 VAL 39 22.812 57.569 17.258 1.00 0.00 C ATOM 317 N VAL 40 25.094 55.288 19.550 1.00 0.00 N ATOM 318 CA VAL 40 26.457 55.566 19.843 1.00 0.00 C ATOM 319 C VAL 40 27.107 55.649 18.439 1.00 0.00 C ATOM 320 O VAL 40 26.446 56.239 17.530 1.00 0.00 O ATOM 321 CB VAL 40 27.054 54.520 20.803 1.00 0.00 C ATOM 322 CG1 VAL 40 26.350 54.546 22.141 1.00 0.00 C ATOM 323 CG2 VAL 40 26.998 53.121 20.196 1.00 0.00 C ATOM 324 N SER 41 28.404 55.593 18.283 1.00 0.00 N ATOM 325 CA SER 41 28.909 55.597 16.911 1.00 0.00 C ATOM 326 C SER 41 28.149 54.546 16.015 1.00 0.00 C ATOM 327 O SER 41 27.242 54.957 15.295 1.00 0.00 O ATOM 328 CB SER 41 30.426 55.365 16.962 1.00 0.00 C ATOM 329 OG SER 41 30.874 54.281 17.748 1.00 0.00 O ATOM 330 N GLN 42 28.200 53.274 16.437 1.00 0.00 N ATOM 331 CA GLN 42 27.607 52.126 15.752 1.00 0.00 C ATOM 332 C GLN 42 28.117 51.813 14.280 1.00 0.00 C ATOM 333 O GLN 42 27.730 50.709 13.793 1.00 0.00 O ATOM 334 CB GLN 42 26.085 52.301 15.709 1.00 0.00 C ATOM 335 CG GLN 42 25.243 52.646 14.479 1.00 0.00 C ATOM 336 CD GLN 42 23.841 53.206 14.789 1.00 0.00 C ATOM 337 OE1 GLN 42 23.094 53.597 13.884 1.00 0.00 O ATOM 338 NE2 GLN 42 23.351 53.297 16.021 1.00 0.00 N ATOM 339 N PRO 43 28.753 52.689 13.440 1.00 0.00 N ATOM 340 CA PRO 43 29.133 52.207 12.103 1.00 0.00 C ATOM 341 C PRO 43 30.425 51.299 12.089 1.00 0.00 C ATOM 342 O PRO 43 31.544 51.744 11.815 1.00 0.00 O ATOM 343 CB PRO 43 29.426 53.464 11.195 1.00 0.00 C ATOM 344 CG PRO 43 29.962 54.455 12.291 1.00 0.00 C ATOM 345 CD PRO 43 29.375 54.072 13.640 1.00 0.00 C ATOM 346 N ASP 44 30.261 50.138 12.616 1.00 0.00 N ATOM 347 CA ASP 44 31.229 49.075 12.582 1.00 0.00 C ATOM 348 C ASP 44 30.712 47.804 11.818 1.00 0.00 C ATOM 349 O ASP 44 31.265 46.730 12.104 1.00 0.00 O ATOM 350 CB ASP 44 31.608 48.743 13.975 1.00 0.00 C ATOM 351 CG ASP 44 32.871 48.092 14.288 1.00 0.00 C ATOM 352 OD1 ASP 44 33.833 48.861 14.528 1.00 0.00 O ATOM 353 OD2 ASP 44 32.831 46.850 14.277 1.00 0.00 O ATOM 354 N PHE 45 29.745 47.903 10.853 1.00 0.00 N ATOM 355 CA PHE 45 29.230 46.688 10.256 1.00 0.00 C ATOM 356 C PHE 45 30.140 46.091 9.163 1.00 0.00 C ATOM 357 O PHE 45 30.121 46.514 8.012 1.00 0.00 O ATOM 358 CB PHE 45 27.888 47.025 9.607 1.00 0.00 C ATOM 359 CG PHE 45 26.809 45.973 9.539 1.00 0.00 C ATOM 360 CD1 PHE 45 26.556 45.142 10.641 1.00 0.00 C ATOM 361 CD2 PHE 45 26.130 45.766 8.344 1.00 0.00 C ATOM 362 CE1 PHE 45 25.574 44.153 10.570 1.00 0.00 C ATOM 363 CE2 PHE 45 25.169 44.751 8.256 1.00 0.00 C ATOM 364 CZ PHE 45 24.918 43.980 9.360 1.00 0.00 C ATOM 365 N ARG 46 31.235 45.520 9.675 1.00 0.00 N ATOM 366 CA ARG 46 32.236 44.798 8.900 1.00 0.00 C ATOM 367 C ARG 46 32.241 43.387 9.462 1.00 0.00 C ATOM 368 O ARG 46 33.230 42.951 10.039 1.00 0.00 O ATOM 369 CB ARG 46 33.567 45.518 8.901 1.00 0.00 C ATOM 370 CG ARG 46 34.740 44.627 8.557 1.00 0.00 C ATOM 371 CD ARG 46 36.017 45.442 8.342 1.00 0.00 C ATOM 372 NE ARG 46 35.845 46.461 7.308 1.00 0.00 N ATOM 373 CZ ARG 46 36.591 47.568 7.116 1.00 0.00 C ATOM 374 NH1 ARG 46 37.652 47.889 7.826 1.00 0.00 H ATOM 375 NH2 ARG 46 36.263 48.390 6.145 1.00 0.00 H ATOM 376 N ARG 47 31.520 42.617 8.615 1.00 0.00 N ATOM 377 CA ARG 47 31.160 41.270 8.799 1.00 0.00 C ATOM 378 C ARG 47 32.056 40.283 8.111 1.00 0.00 C ATOM 379 O ARG 47 32.306 40.454 6.880 1.00 0.00 O ATOM 380 CB ARG 47 29.868 41.241 8.025 1.00 0.00 C ATOM 381 CG ARG 47 29.804 41.094 6.515 1.00 0.00 C ATOM 382 CD ARG 47 28.379 41.275 5.991 1.00 0.00 C ATOM 383 NE ARG 47 28.400 41.116 4.525 1.00 0.00 N ATOM 384 CZ ARG 47 28.893 42.026 3.679 1.00 0.00 C ATOM 385 NH1 ARG 47 29.257 43.279 4.008 1.00 0.00 H ATOM 386 NH2 ARG 47 29.084 41.653 2.411 1.00 0.00 H ATOM 387 N GLN 48 32.917 39.722 8.860 1.00 0.00 N ATOM 388 CA GLN 48 33.751 38.739 8.261 1.00 0.00 C ATOM 389 C GLN 48 33.600 37.544 9.063 1.00 0.00 C ATOM 390 O GLN 48 33.905 37.643 10.238 1.00 0.00 O ATOM 391 CB GLN 48 35.142 39.153 7.958 1.00 0.00 C ATOM 392 CG GLN 48 35.287 40.432 7.211 1.00 0.00 C ATOM 393 CD GLN 48 35.015 40.106 5.742 1.00 0.00 C ATOM 394 OE1 GLN 48 35.216 38.976 5.301 1.00 0.00 O ATOM 395 NE2 GLN 48 34.485 41.128 5.098 1.00 0.00 N ATOM 396 N PRO 49 32.814 36.534 8.602 1.00 0.00 N ATOM 397 CA PRO 49 32.592 35.424 9.428 1.00 0.00 C ATOM 398 C PRO 49 33.830 34.973 10.137 1.00 0.00 C ATOM 399 O PRO 49 34.858 34.849 9.472 1.00 0.00 O ATOM 400 CB PRO 49 31.866 34.343 8.568 1.00 0.00 C ATOM 401 CG PRO 49 32.453 34.774 7.179 1.00 0.00 C ATOM 402 CD PRO 49 32.205 36.299 7.216 1.00 0.00 C ATOM 403 N VAL 50 33.807 35.260 11.428 1.00 0.00 N ATOM 404 CA VAL 50 34.923 34.763 12.095 1.00 0.00 C ATOM 405 C VAL 50 34.821 33.199 12.167 1.00 0.00 C ATOM 406 O VAL 50 33.793 32.690 11.835 1.00 0.00 O ATOM 407 CB VAL 50 35.213 35.470 13.416 1.00 0.00 C ATOM 408 CG1 VAL 50 36.479 34.921 14.064 1.00 0.00 C ATOM 409 CG2 VAL 50 35.266 36.944 13.304 1.00 0.00 C ATOM 410 N SER 51 35.917 32.489 12.023 1.00 0.00 N ATOM 411 CA SER 51 35.951 31.012 12.185 1.00 0.00 C ATOM 412 C SER 51 36.775 30.758 13.512 1.00 0.00 C ATOM 413 O SER 51 38.021 30.902 13.439 1.00 0.00 O ATOM 414 CB SER 51 36.535 30.369 10.921 1.00 0.00 C ATOM 415 OG SER 51 37.876 30.702 10.618 1.00 0.00 O ATOM 416 N GLU 52 36.214 30.251 14.586 1.00 0.00 N ATOM 417 CA GLU 52 36.774 30.049 15.958 1.00 0.00 C ATOM 418 C GLU 52 35.645 29.271 16.619 1.00 0.00 C ATOM 419 O GLU 52 34.493 29.749 16.634 1.00 0.00 O ATOM 420 CB GLU 52 37.175 31.350 16.681 1.00 0.00 C ATOM 421 CG GLU 52 38.423 31.990 16.071 1.00 0.00 C ATOM 422 CD GLU 52 39.831 31.298 16.164 1.00 0.00 C ATOM 423 OE1 GLU 52 40.024 30.228 16.766 1.00 0.00 O ATOM 424 OE2 GLU 52 40.773 31.865 15.589 1.00 0.00 O ATOM 425 N THR 53 35.995 27.987 16.645 1.00 0.00 N ATOM 426 CA THR 53 35.182 26.900 17.001 1.00 0.00 C ATOM 427 C THR 53 33.947 27.518 17.643 1.00 0.00 C ATOM 428 O THR 53 34.148 28.155 18.697 1.00 0.00 O ATOM 429 CB THR 53 35.959 25.861 17.871 1.00 0.00 C ATOM 430 OG1 THR 53 37.002 25.189 17.122 1.00 0.00 O ATOM 431 CG2 THR 53 35.020 24.739 18.435 1.00 0.00 C ATOM 432 N MET 54 32.843 26.903 17.378 1.00 0.00 N ATOM 433 CA MET 54 31.512 27.380 17.699 1.00 0.00 C ATOM 434 C MET 54 31.032 28.532 16.739 1.00 0.00 C ATOM 435 O MET 54 30.936 28.287 15.523 1.00 0.00 O ATOM 436 CB MET 54 31.585 27.900 19.146 1.00 0.00 C ATOM 437 CG MET 54 31.843 26.798 20.118 1.00 0.00 C ATOM 438 SD MET 54 31.757 27.595 21.804 1.00 0.00 S ATOM 439 CE MET 54 33.156 28.623 21.623 1.00 0.00 C ATOM 440 N GLN 55 30.276 29.468 17.348 1.00 0.00 N ATOM 441 CA GLN 55 29.823 30.646 16.709 1.00 0.00 C ATOM 442 C GLN 55 30.967 31.617 16.460 1.00 0.00 C ATOM 443 O GLN 55 31.474 32.248 17.403 1.00 0.00 O ATOM 444 CB GLN 55 28.856 31.411 17.587 1.00 0.00 C ATOM 445 CG GLN 55 28.457 32.875 17.157 1.00 0.00 C ATOM 446 CD GLN 55 29.400 34.008 17.589 1.00 0.00 C ATOM 447 OE1 GLN 55 29.888 34.016 18.719 1.00 0.00 O ATOM 448 NE2 GLN 55 29.683 35.017 16.723 1.00 0.00 N ATOM 449 N VAL 56 31.283 31.692 15.218 1.00 0.00 N ATOM 450 CA VAL 56 32.371 32.531 14.934 1.00 0.00 C ATOM 451 C VAL 56 32.125 33.392 13.704 1.00 0.00 C ATOM 452 O VAL 56 32.357 34.575 13.839 1.00 0.00 O ATOM 453 CB VAL 56 33.669 31.709 14.917 1.00 0.00 C ATOM 454 CG1 VAL 56 33.698 30.786 13.650 1.00 0.00 C ATOM 455 CG2 VAL 56 34.931 32.585 14.743 1.00 0.00 C ATOM 456 N TYR 57 31.067 33.034 12.946 1.00 0.00 N ATOM 457 CA TYR 57 30.643 33.674 11.774 1.00 0.00 C ATOM 458 C TYR 57 30.443 35.157 11.918 1.00 0.00 C ATOM 459 O TYR 57 30.452 35.798 10.869 1.00 0.00 O ATOM 460 CB TYR 57 29.345 33.020 11.311 1.00 0.00 C ATOM 461 CG TYR 57 29.327 31.666 10.732 1.00 0.00 C ATOM 462 CD1 TYR 57 29.719 31.390 9.419 1.00 0.00 C ATOM 463 CD2 TYR 57 28.916 30.648 11.562 1.00 0.00 C ATOM 464 CE1 TYR 57 29.696 30.093 8.935 1.00 0.00 C ATOM 465 CE2 TYR 57 28.913 29.299 11.097 1.00 0.00 C ATOM 466 CZ TYR 57 29.283 29.083 9.761 1.00 0.00 C ATOM 467 OH TYR 57 29.221 27.797 9.289 1.00 0.00 H ATOM 468 N LEU 58 29.756 35.669 12.970 1.00 0.00 N ATOM 469 CA LEU 58 29.540 37.074 12.948 1.00 0.00 C ATOM 470 C LEU 58 30.132 37.831 14.160 1.00 0.00 C ATOM 471 O LEU 58 29.998 37.382 15.294 1.00 0.00 O ATOM 472 CB LEU 58 28.031 37.237 12.553 1.00 0.00 C ATOM 473 CG LEU 58 27.747 38.225 11.432 1.00 0.00 C ATOM 474 CD1 LEU 58 28.990 38.248 10.581 1.00 0.00 C ATOM 475 CD2 LEU 58 26.635 37.742 10.527 1.00 0.00 C ATOM 476 N LYS 59 31.292 38.431 13.785 1.00 0.00 N ATOM 477 CA LYS 59 32.004 39.207 14.735 1.00 0.00 C ATOM 478 C LYS 59 31.895 40.640 14.104 1.00 0.00 C ATOM 479 O LYS 59 30.776 41.186 14.362 1.00 0.00 O ATOM 480 CB LYS 59 33.373 38.620 14.660 1.00 0.00 C ATOM 481 CG LYS 59 33.640 37.333 15.310 1.00 0.00 C ATOM 482 CD LYS 59 32.947 37.198 16.639 1.00 0.00 C ATOM 483 CE LYS 59 32.980 35.810 17.220 1.00 0.00 C ATOM 484 NZ LYS 59 34.315 35.323 17.569 1.00 0.00 N ATOM 485 N GLN 60 32.691 41.057 13.057 1.00 0.00 N ATOM 486 CA GLN 60 32.386 42.412 12.513 1.00 0.00 C ATOM 487 C GLN 60 31.617 43.271 13.603 1.00 0.00 C ATOM 488 O GLN 60 32.072 43.342 14.723 1.00 0.00 O ATOM 489 CB GLN 60 31.276 41.954 11.507 1.00 0.00 C ATOM 490 CG GLN 60 29.850 42.069 11.663 1.00 0.00 C ATOM 491 CD GLN 60 29.019 41.981 10.412 1.00 0.00 C ATOM 492 OE1 GLN 60 28.800 42.990 9.729 1.00 0.00 O ATOM 493 NE2 GLN 60 28.435 40.818 10.186 1.00 0.00 N ATOM 494 N ALA 61 30.841 44.025 13.076 1.00 0.00 N ATOM 495 CA ALA 61 29.636 44.890 13.522 1.00 0.00 C ATOM 496 C ALA 61 29.601 45.218 14.976 1.00 0.00 C ATOM 497 O ALA 61 28.547 45.133 15.658 1.00 0.00 O ATOM 498 CB ALA 61 28.303 44.286 13.061 1.00 0.00 C ATOM 499 N ALA 62 30.734 45.493 15.420 1.00 0.00 N ATOM 500 CA ALA 62 30.940 46.012 16.705 1.00 0.00 C ATOM 501 C ALA 62 30.345 47.404 16.539 1.00 0.00 C ATOM 502 O ALA 62 29.253 47.623 15.926 1.00 0.00 O ATOM 503 CB ALA 62 32.470 45.946 16.916 1.00 0.00 C ATOM 504 N ASP 63 30.937 48.382 17.100 1.00 0.00 N ATOM 505 CA ASP 63 30.420 49.689 17.037 1.00 0.00 C ATOM 506 C ASP 63 29.351 49.989 18.099 1.00 0.00 C ATOM 507 O ASP 63 29.518 51.136 18.617 1.00 0.00 O ATOM 508 CB ASP 63 30.255 50.347 15.695 1.00 0.00 C ATOM 509 CG ASP 63 30.924 51.542 15.217 1.00 0.00 C ATOM 510 OD1 ASP 63 30.448 52.643 15.529 1.00 0.00 O ATOM 511 OD2 ASP 63 31.952 51.436 14.531 1.00 0.00 O ATOM 512 N PRO 64 28.175 49.301 18.459 1.00 0.00 N ATOM 513 CA PRO 64 27.545 49.772 19.628 1.00 0.00 C ATOM 514 C PRO 64 28.536 49.645 20.860 1.00 0.00 C ATOM 515 O PRO 64 29.200 48.600 20.976 1.00 0.00 O ATOM 516 CB PRO 64 26.250 49.002 19.892 1.00 0.00 C ATOM 517 CG PRO 64 26.618 47.670 19.193 1.00 0.00 C ATOM 518 CD PRO 64 27.355 48.095 17.935 1.00 0.00 C ATOM 519 N GLY 65 28.584 50.652 21.764 1.00 0.00 N ATOM 520 CA GLY 65 29.482 50.656 22.903 1.00 0.00 C ATOM 521 C GLY 65 29.220 49.427 23.801 1.00 0.00 C ATOM 522 O GLY 65 28.152 49.315 24.370 1.00 0.00 O ATOM 523 N ARG 66 30.327 48.884 24.210 1.00 0.00 N ATOM 524 CA ARG 66 30.420 47.787 25.136 1.00 0.00 C ATOM 525 C ARG 66 30.446 48.055 26.640 1.00 0.00 C ATOM 526 O ARG 66 30.110 47.162 27.353 1.00 0.00 O ATOM 527 CB ARG 66 31.207 46.568 24.605 1.00 0.00 C ATOM 528 CG ARG 66 32.691 46.729 25.233 1.00 0.00 C ATOM 529 CD ARG 66 33.424 47.976 24.816 1.00 0.00 C ATOM 530 NE ARG 66 34.735 47.967 25.343 1.00 0.00 N ATOM 531 CZ ARG 66 35.100 48.327 26.603 1.00 0.00 C ATOM 532 NH1 ARG 66 34.265 48.771 27.525 1.00 0.00 H ATOM 533 NH2 ARG 66 36.387 48.253 26.888 1.00 0.00 H ATOM 534 N ASP 67 30.853 49.172 27.111 1.00 0.00 N ATOM 535 CA ASP 67 30.838 49.576 28.520 1.00 0.00 C ATOM 536 C ASP 67 31.947 48.890 29.323 1.00 0.00 C ATOM 537 O ASP 67 32.663 49.594 30.042 1.00 0.00 O ATOM 538 CB ASP 67 29.421 49.325 29.052 1.00 0.00 C ATOM 539 CG ASP 67 29.227 49.626 30.499 1.00 0.00 C ATOM 540 OD1 ASP 67 28.317 49.076 31.136 1.00 0.00 O ATOM 541 OD2 ASP 67 30.015 50.448 31.038 1.00 0.00 O ATOM 542 N VAL 68 32.042 47.556 29.298 1.00 0.00 N ATOM 543 CA VAL 68 32.980 46.736 30.081 1.00 0.00 C ATOM 544 C VAL 68 32.924 47.126 31.607 1.00 0.00 C ATOM 545 O VAL 68 33.898 46.918 32.395 1.00 0.00 O ATOM 546 CB VAL 68 34.350 46.646 29.501 1.00 0.00 C ATOM 547 CG1 VAL 68 35.423 46.065 30.448 1.00 0.00 C ATOM 548 CG2 VAL 68 34.502 45.899 28.221 1.00 0.00 C ATOM 549 N GLY 69 31.714 47.265 32.119 1.00 0.00 N ATOM 550 CA GLY 69 31.423 47.667 33.459 1.00 0.00 C ATOM 551 C GLY 69 31.984 49.090 33.596 1.00 0.00 C ATOM 552 O GLY 69 33.170 49.325 33.244 1.00 0.00 O ATOM 553 N LEU 70 31.416 49.862 34.442 1.00 0.00 N ATOM 554 CA LEU 70 31.865 51.192 34.779 1.00 0.00 C ATOM 555 C LEU 70 32.073 52.143 33.567 1.00 0.00 C ATOM 556 O LEU 70 33.185 52.706 33.482 1.00 0.00 O ATOM 557 CB LEU 70 33.120 51.043 35.659 1.00 0.00 C ATOM 558 CG LEU 70 32.869 50.419 37.015 1.00 0.00 C ATOM 559 CD1 LEU 70 34.176 50.069 37.747 1.00 0.00 C ATOM 560 CD2 LEU 70 31.801 51.135 37.825 1.00 0.00 C ATOM 561 N TYR 71 31.198 52.184 32.561 1.00 0.00 N ATOM 562 CA TYR 71 31.379 53.216 31.554 1.00 0.00 C ATOM 563 C TYR 71 32.321 52.963 30.339 1.00 0.00 C ATOM 564 O TYR 71 31.731 53.012 29.270 1.00 0.00 O ATOM 565 CB TYR 71 31.586 54.639 32.122 1.00 0.00 C ATOM 566 CG TYR 71 30.527 55.254 33.013 1.00 0.00 C ATOM 567 CD1 TYR 71 30.637 55.083 34.398 1.00 0.00 C ATOM 568 CD2 TYR 71 29.419 55.942 32.509 1.00 0.00 C ATOM 569 CE1 TYR 71 29.663 55.584 35.258 1.00 0.00 C ATOM 570 CE2 TYR 71 28.456 56.475 33.370 1.00 0.00 C ATOM 571 CZ TYR 71 28.582 56.300 34.747 1.00 0.00 C ATOM 572 OH TYR 71 27.675 56.807 35.635 1.00 0.00 H ATOM 573 N TRP 72 33.546 52.359 30.433 1.00 0.00 N ATOM 574 CA TRP 72 34.513 52.322 29.290 1.00 0.00 C ATOM 575 C TRP 72 33.818 52.598 27.929 1.00 0.00 C ATOM 576 O TRP 72 33.619 53.804 27.658 1.00 0.00 O ATOM 577 CB TRP 72 35.426 51.059 29.347 1.00 0.00 C ATOM 578 CG TRP 72 36.347 51.025 30.531 1.00 0.00 C ATOM 579 CD1 TRP 72 36.252 50.275 31.654 1.00 0.00 C ATOM 580 CD2 TRP 72 37.535 51.780 30.693 1.00 0.00 C ATOM 581 NE1 TRP 72 37.356 50.514 32.473 1.00 0.00 N ATOM 582 CE2 TRP 72 38.107 51.404 31.920 1.00 0.00 C ATOM 583 CE3 TRP 72 38.155 52.718 29.863 1.00 0.00 C ATOM 584 CZ2 TRP 72 39.336 51.931 32.381 1.00 0.00 C ATOM 585 CZ3 TRP 72 39.388 53.275 30.340 1.00 0.00 C ATOM 586 CH2 TRP 72 39.967 52.873 31.559 1.00 0.00 H ATOM 587 N MET 73 33.311 51.559 27.339 1.00 0.00 N ATOM 588 CA MET 73 32.480 51.555 26.169 1.00 0.00 C ATOM 589 C MET 73 32.695 52.625 25.072 1.00 0.00 C ATOM 590 O MET 73 32.049 52.484 24.036 1.00 0.00 O ATOM 591 CB MET 73 31.064 51.930 26.690 1.00 0.00 C ATOM 592 CG MET 73 29.953 51.983 25.679 1.00 0.00 C ATOM 593 SD MET 73 28.338 52.047 26.479 1.00 0.00 S ATOM 594 CE MET 73 28.396 53.631 27.295 1.00 0.00 C ATOM 595 N ALA 74 33.713 53.497 25.076 1.00 0.00 N ATOM 596 CA ALA 74 33.912 54.399 23.961 1.00 0.00 C ATOM 597 C ALA 74 34.804 53.535 23.058 1.00 0.00 C ATOM 598 O ALA 74 35.960 53.317 23.475 1.00 0.00 O ATOM 599 CB ALA 74 34.490 55.763 24.373 1.00 0.00 C ATOM 600 N THR 75 34.467 53.399 21.840 1.00 0.00 N ATOM 601 CA THR 75 35.086 52.469 20.896 1.00 0.00 C ATOM 602 C THR 75 34.433 51.061 20.968 1.00 0.00 C ATOM 603 O THR 75 34.761 50.270 20.088 1.00 0.00 O ATOM 604 CB THR 75 36.639 52.429 21.016 1.00 0.00 C ATOM 605 OG1 THR 75 37.300 53.715 20.964 1.00 0.00 O ATOM 606 CG2 THR 75 37.168 51.648 19.771 1.00 0.00 C ATOM 607 N ASP 76 33.679 50.706 21.994 1.00 0.00 N ATOM 608 CA ASP 76 32.875 49.513 22.066 1.00 0.00 C ATOM 609 C ASP 76 33.561 48.230 21.539 1.00 0.00 C ATOM 610 O ASP 76 34.563 47.777 22.106 1.00 0.00 O ATOM 611 CB ASP 76 31.662 49.851 21.219 1.00 0.00 C ATOM 612 CG ASP 76 31.601 51.175 20.543 1.00 0.00 C ATOM 613 OD1 ASP 76 32.017 51.293 19.361 1.00 0.00 O ATOM 614 OD2 ASP 76 31.325 52.282 21.237 1.00 0.00 O ATOM 615 N PHE 77 33.194 47.953 20.278 1.00 0.00 N ATOM 616 CA PHE 77 33.542 46.817 19.522 1.00 0.00 C ATOM 617 C PHE 77 32.714 45.583 19.882 1.00 0.00 C ATOM 618 O PHE 77 33.252 44.460 19.852 1.00 0.00 O ATOM 619 CB PHE 77 34.990 46.487 19.596 1.00 0.00 C ATOM 620 CG PHE 77 36.013 47.192 18.817 1.00 0.00 C ATOM 621 CD1 PHE 77 36.826 48.192 19.350 1.00 0.00 C ATOM 622 CD2 PHE 77 36.184 46.895 17.446 1.00 0.00 C ATOM 623 CE1 PHE 77 37.778 48.890 18.605 1.00 0.00 C ATOM 624 CE2 PHE 77 37.112 47.589 16.688 1.00 0.00 C ATOM 625 CZ PHE 77 37.924 48.567 17.264 1.00 0.00 C ATOM 626 N GLU 78 31.362 45.737 19.990 1.00 0.00 N ATOM 627 CA GLU 78 30.556 44.588 20.220 1.00 0.00 C ATOM 628 C GLU 78 29.952 44.109 18.834 1.00 0.00 C ATOM 629 O GLU 78 28.859 44.475 18.402 1.00 0.00 O ATOM 630 CB GLU 78 29.465 44.938 21.166 1.00 0.00 C ATOM 631 CG GLU 78 28.360 45.909 20.845 1.00 0.00 C ATOM 632 CD GLU 78 27.530 46.405 22.012 1.00 0.00 C ATOM 633 OE1 GLU 78 28.081 46.774 23.033 1.00 0.00 O ATOM 634 OE2 GLU 78 26.288 46.317 21.780 1.00 0.00 O ATOM 635 N ASN 79 30.637 43.133 18.318 1.00 0.00 N ATOM 636 CA ASN 79 30.443 42.460 17.098 1.00 0.00 C ATOM 637 C ASN 79 29.085 41.730 17.071 1.00 0.00 C ATOM 638 O ASN 79 28.686 41.112 18.056 1.00 0.00 O ATOM 639 CB ASN 79 31.551 41.431 17.194 1.00 0.00 C ATOM 640 CG ASN 79 32.993 41.761 16.940 1.00 0.00 C ATOM 641 OD1 ASN 79 33.428 42.924 17.036 1.00 0.00 O ATOM 642 ND2 ASN 79 33.774 40.724 16.607 1.00 0.00 N ATOM 643 N ARG 80 28.295 42.043 16.033 1.00 0.00 N ATOM 644 CA ARG 80 27.026 41.443 15.831 1.00 0.00 C ATOM 645 C ARG 80 27.324 39.997 15.462 1.00 0.00 C ATOM 646 O ARG 80 27.922 39.728 14.408 1.00 0.00 O ATOM 647 CB ARG 80 26.360 42.256 14.694 1.00 0.00 C ATOM 648 CG ARG 80 25.234 43.135 15.221 1.00 0.00 C ATOM 649 CD ARG 80 24.246 43.486 14.171 1.00 0.00 C ATOM 650 NE ARG 80 24.646 44.613 13.338 1.00 0.00 N ATOM 651 CZ ARG 80 24.796 45.834 13.864 1.00 0.00 C ATOM 652 NH1 ARG 80 24.583 46.033 15.163 1.00 0.00 H ATOM 653 NH2 ARG 80 25.157 46.830 13.072 1.00 0.00 H ATOM 654 N ARG 81 26.840 39.123 16.259 1.00 0.00 N ATOM 655 CA ARG 81 27.139 37.782 16.004 1.00 0.00 C ATOM 656 C ARG 81 25.852 37.158 15.590 1.00 0.00 C ATOM 657 O ARG 81 25.208 36.439 16.381 1.00 0.00 O ATOM 658 CB ARG 81 27.841 37.322 17.207 1.00 0.00 C ATOM 659 CG ARG 81 27.329 36.326 18.096 1.00 0.00 C ATOM 660 CD ARG 81 27.429 36.111 19.585 1.00 0.00 C ATOM 661 NE ARG 81 26.790 34.788 19.748 1.00 0.00 N ATOM 662 CZ ARG 81 26.974 33.827 20.594 1.00 0.00 C ATOM 663 NH1 ARG 81 27.739 34.038 21.665 1.00 0.00 H ATOM 664 NH2 ARG 81 26.480 32.584 20.394 1.00 0.00 H ATOM 665 N PHE 82 25.735 37.192 14.238 1.00 0.00 N ATOM 666 CA PHE 82 24.589 36.667 13.549 1.00 0.00 C ATOM 667 C PHE 82 24.430 35.310 14.172 1.00 0.00 C ATOM 668 O PHE 82 25.443 34.604 14.058 1.00 0.00 O ATOM 669 CB PHE 82 24.795 36.506 12.048 1.00 0.00 C ATOM 670 CG PHE 82 23.541 36.179 11.307 1.00 0.00 C ATOM 671 CD1 PHE 82 22.457 37.060 11.329 1.00 0.00 C ATOM 672 CD2 PHE 82 23.450 34.967 10.665 1.00 0.00 C ATOM 673 CE1 PHE 82 21.275 36.726 10.712 1.00 0.00 C ATOM 674 CE2 PHE 82 22.260 34.644 10.050 1.00 0.00 C ATOM 675 CZ PHE 82 21.180 35.507 10.069 1.00 0.00 C ATOM 676 N PRO 83 23.163 34.766 14.296 1.00 0.00 N ATOM 677 CA PRO 83 23.141 33.577 15.058 1.00 0.00 C ATOM 678 C PRO 83 24.234 32.625 14.692 1.00 0.00 C ATOM 679 O PRO 83 24.421 32.262 13.507 1.00 0.00 O ATOM 680 CB PRO 83 21.854 32.776 14.735 1.00 0.00 C ATOM 681 CG PRO 83 21.564 33.257 13.265 1.00 0.00 C ATOM 682 CD PRO 83 22.025 34.729 13.302 1.00 0.00 C ATOM 683 N GLY 84 24.990 32.298 15.733 1.00 0.00 N ATOM 684 CA GLY 84 25.994 31.326 15.557 1.00 0.00 C ATOM 685 C GLY 84 25.391 30.137 16.301 1.00 0.00 C ATOM 686 O GLY 84 25.521 30.102 17.524 1.00 0.00 O ATOM 687 N LYS 85 25.419 29.045 15.639 1.00 0.00 N ATOM 688 CA LYS 85 24.837 27.840 16.073 1.00 0.00 C ATOM 689 C LYS 85 25.857 26.736 16.465 1.00 0.00 C ATOM 690 O LYS 85 25.640 25.610 15.981 1.00 0.00 O ATOM 691 CB LYS 85 24.167 27.359 14.735 1.00 0.00 C ATOM 692 CG LYS 85 23.298 28.323 13.997 1.00 0.00 C ATOM 693 CD LYS 85 22.190 27.672 13.148 1.00 0.00 C ATOM 694 CE LYS 85 21.472 28.678 12.231 1.00 0.00 C ATOM 695 NZ LYS 85 22.365 29.087 11.140 1.00 0.00 N ATOM 696 N VAL 86 27.140 27.043 16.824 1.00 0.00 N ATOM 697 CA VAL 86 27.954 25.872 17.278 1.00 0.00 C ATOM 698 C VAL 86 26.964 24.941 18.029 1.00 0.00 C ATOM 699 O VAL 86 26.146 25.514 18.763 1.00 0.00 O ATOM 700 CB VAL 86 29.045 26.251 18.230 1.00 0.00 C ATOM 701 CG1 VAL 86 28.640 27.095 19.438 1.00 0.00 C ATOM 702 CG2 VAL 86 30.047 25.166 18.554 1.00 0.00 C ATOM 703 N SER 87 27.144 23.677 18.031 1.00 0.00 N ATOM 704 CA SER 87 26.209 22.782 18.651 1.00 0.00 C ATOM 705 C SER 87 25.643 23.299 20.030 1.00 0.00 C ATOM 706 O SER 87 24.407 23.379 20.107 1.00 0.00 O ATOM 707 CB SER 87 26.954 21.480 18.787 1.00 0.00 C ATOM 708 OG SER 87 26.272 20.313 19.098 1.00 0.00 O ATOM 709 N PRO 88 26.420 23.523 21.136 1.00 0.00 N ATOM 710 CA PRO 88 25.864 24.074 22.330 1.00 0.00 C ATOM 711 C PRO 88 25.489 25.606 22.338 1.00 0.00 C ATOM 712 O PRO 88 25.335 26.116 23.454 1.00 0.00 O ATOM 713 CB PRO 88 26.896 23.868 23.480 1.00 0.00 C ATOM 714 CG PRO 88 28.214 23.959 22.678 1.00 0.00 C ATOM 715 CD PRO 88 27.911 23.338 21.319 1.00 0.00 C ATOM 716 N SER 89 25.591 26.373 21.296 1.00 0.00 N ATOM 717 CA SER 89 25.347 27.827 21.244 1.00 0.00 C ATOM 718 C SER 89 24.159 28.212 22.227 1.00 0.00 C ATOM 719 O SER 89 24.393 29.093 23.079 1.00 0.00 O ATOM 720 CB SER 89 25.024 28.261 19.823 1.00 0.00 C ATOM 721 OG SER 89 23.814 27.768 19.262 1.00 0.00 O ATOM 722 N GLY 90 23.040 27.499 22.112 1.00 0.00 N ATOM 723 CA GLY 90 21.987 27.750 23.048 1.00 0.00 C ATOM 724 C GLY 90 22.495 27.226 24.384 1.00 0.00 C ATOM 725 O GLY 90 22.910 26.056 24.430 1.00 0.00 O ATOM 726 N PHE 91 21.875 27.738 25.368 1.00 0.00 N ATOM 727 CA PHE 91 22.163 27.543 26.765 1.00 0.00 C ATOM 728 C PHE 91 23.541 28.121 27.241 1.00 0.00 C ATOM 729 O PHE 91 24.254 27.480 28.027 1.00 0.00 O ATOM 730 CB PHE 91 22.128 26.043 27.126 1.00 0.00 C ATOM 731 CG PHE 91 20.794 25.446 27.349 1.00 0.00 C ATOM 732 CD1 PHE 91 19.677 26.037 26.723 1.00 0.00 C ATOM 733 CD2 PHE 91 20.623 24.286 28.130 1.00 0.00 C ATOM 734 CE1 PHE 91 18.398 25.475 26.875 1.00 0.00 C ATOM 735 CE2 PHE 91 19.358 23.714 28.287 1.00 0.00 C ATOM 736 CZ PHE 91 18.277 24.326 27.650 1.00 0.00 C ATOM 737 N GLN 92 23.999 29.279 26.739 1.00 0.00 N ATOM 738 CA GLN 92 25.191 29.941 27.293 1.00 0.00 C ATOM 739 C GLN 92 24.604 31.177 27.892 1.00 0.00 C ATOM 740 O GLN 92 24.546 32.221 27.255 1.00 0.00 O ATOM 741 CB GLN 92 26.268 30.234 26.289 1.00 0.00 C ATOM 742 CG GLN 92 26.987 29.026 25.758 1.00 0.00 C ATOM 743 CD GLN 92 27.878 29.440 24.602 1.00 0.00 C ATOM 744 OE1 GLN 92 28.873 30.136 24.734 1.00 0.00 O ATOM 745 NE2 GLN 92 27.537 28.980 23.427 1.00 0.00 N ATOM 746 N LYS 93 24.297 31.021 29.178 1.00 0.00 N ATOM 747 CA LYS 93 23.618 32.065 29.916 1.00 0.00 C ATOM 748 C LYS 93 24.156 33.454 29.582 1.00 0.00 C ATOM 749 O LYS 93 23.344 34.396 29.512 1.00 0.00 O ATOM 750 CB LYS 93 23.724 31.641 31.382 1.00 0.00 C ATOM 751 CG LYS 93 22.886 32.388 32.379 1.00 0.00 C ATOM 752 CD LYS 93 23.253 31.991 33.826 1.00 0.00 C ATOM 753 CE LYS 93 24.676 32.396 34.218 1.00 0.00 C ATOM 754 NZ LYS 93 24.787 32.488 35.662 1.00 0.00 N ATOM 755 N LEU 94 25.424 33.624 29.740 1.00 0.00 N ATOM 756 CA LEU 94 26.081 34.796 29.332 1.00 0.00 C ATOM 757 C LEU 94 26.421 34.474 27.822 1.00 0.00 C ATOM 758 O LEU 94 26.868 33.371 27.500 1.00 0.00 O ATOM 759 CB LEU 94 27.239 34.929 30.246 1.00 0.00 C ATOM 760 CG LEU 94 27.442 34.953 31.732 1.00 0.00 C ATOM 761 CD1 LEU 94 26.297 35.709 32.371 1.00 0.00 C ATOM 762 CD2 LEU 94 27.398 33.525 32.237 1.00 0.00 C ATOM 763 N TYR 95 25.730 35.142 26.934 1.00 0.00 N ATOM 764 CA TYR 95 25.909 34.830 25.507 1.00 0.00 C ATOM 765 C TYR 95 26.807 35.846 24.755 1.00 0.00 C ATOM 766 O TYR 95 26.910 35.772 23.533 1.00 0.00 O ATOM 767 CB TYR 95 24.518 34.890 25.004 1.00 0.00 C ATOM 768 CG TYR 95 23.669 33.667 25.073 1.00 0.00 C ATOM 769 CD1 TYR 95 22.688 33.637 26.075 1.00 0.00 C ATOM 770 CD2 TYR 95 23.868 32.538 24.270 1.00 0.00 C ATOM 771 CE1 TYR 95 21.894 32.513 26.265 1.00 0.00 C ATOM 772 CE2 TYR 95 23.104 31.387 24.462 1.00 0.00 C ATOM 773 CZ TYR 95 22.107 31.392 25.453 1.00 0.00 C ATOM 774 OH TYR 95 21.351 30.242 25.624 1.00 0.00 H ATOM 775 N ARG 96 27.378 36.771 25.454 1.00 0.00 N ATOM 776 CA ARG 96 28.249 37.760 24.980 1.00 0.00 C ATOM 777 C ARG 96 29.729 37.519 25.481 1.00 0.00 C ATOM 778 O ARG 96 30.284 38.364 26.237 1.00 0.00 O ATOM 779 CB ARG 96 27.730 38.978 25.713 1.00 0.00 C ATOM 780 CG ARG 96 26.350 39.496 25.498 1.00 0.00 C ATOM 781 CD ARG 96 26.037 39.942 24.125 1.00 0.00 C ATOM 782 NE ARG 96 24.604 40.285 23.908 1.00 0.00 N ATOM 783 CZ ARG 96 23.651 39.451 23.416 1.00 0.00 C ATOM 784 NH1 ARG 96 24.009 38.231 23.025 1.00 0.00 H ATOM 785 NH2 ARG 96 22.412 39.908 23.397 1.00 0.00 H ATOM 786 N GLN 97 30.446 36.892 24.513 1.00 0.00 N ATOM 787 CA GLN 97 31.774 36.530 24.810 1.00 0.00 C ATOM 788 C GLN 97 32.565 37.833 24.757 1.00 0.00 C ATOM 789 O GLN 97 32.774 38.365 23.645 1.00 0.00 O ATOM 790 CB GLN 97 32.341 35.639 23.737 1.00 0.00 C ATOM 791 CG GLN 97 31.559 34.363 23.531 1.00 0.00 C ATOM 792 CD GLN 97 30.619 34.514 22.347 1.00 0.00 C ATOM 793 OE1 GLN 97 29.780 35.411 22.273 1.00 0.00 O ATOM 794 NE2 GLN 97 30.736 33.670 21.340 1.00 0.00 N ATOM 795 N TRP 98 33.319 38.100 25.779 1.00 0.00 N ATOM 796 CA TRP 98 34.106 39.298 25.876 1.00 0.00 C ATOM 797 C TRP 98 35.546 39.270 25.349 1.00 0.00 C ATOM 798 O TRP 98 36.231 40.251 25.590 1.00 0.00 O ATOM 799 CB TRP 98 34.190 39.771 27.304 1.00 0.00 C ATOM 800 CG TRP 98 32.887 40.031 28.013 1.00 0.00 C ATOM 801 CD1 TRP 98 31.687 40.218 27.428 1.00 0.00 C ATOM 802 CD2 TRP 98 32.657 40.234 29.417 1.00 0.00 C ATOM 803 NE1 TRP 98 30.727 40.436 28.371 1.00 0.00 N ATOM 804 CE2 TRP 98 31.318 40.551 29.588 1.00 0.00 C ATOM 805 CE3 TRP 98 33.466 40.197 30.544 1.00 0.00 C ATOM 806 CZ2 TRP 98 30.775 40.797 30.831 1.00 0.00 C ATOM 807 CZ3 TRP 98 32.927 40.565 31.780 1.00 0.00 C ATOM 808 CH2 TRP 98 31.575 40.793 31.930 1.00 0.00 H ATOM 809 N ARG 99 36.148 38.085 25.025 1.00 0.00 N ATOM 810 CA ARG 99 37.537 38.115 24.628 1.00 0.00 C ATOM 811 C ARG 99 38.472 38.645 25.796 1.00 0.00 C ATOM 812 O ARG 99 38.203 38.164 26.898 1.00 0.00 O ATOM 813 CB ARG 99 37.535 38.767 23.290 1.00 0.00 C ATOM 814 CG ARG 99 37.616 40.322 23.274 1.00 0.00 C ATOM 815 CD ARG 99 37.026 40.915 21.987 1.00 0.00 C ATOM 816 NE ARG 99 37.808 40.595 20.798 1.00 0.00 N ATOM 817 CZ ARG 99 37.811 41.271 19.634 1.00 0.00 C ATOM 818 NH1 ARG 99 38.541 40.875 18.597 1.00 0.00 H ATOM 819 NH2 ARG 99 36.961 42.284 19.475 1.00 0.00 H ATOM 820 N ASN 100 39.195 39.799 25.763 1.00 0.00 N ATOM 821 CA ASN 100 40.180 40.136 26.833 1.00 0.00 C ATOM 822 C ASN 100 41.650 39.580 26.711 1.00 0.00 C ATOM 823 O ASN 100 42.409 39.889 27.644 1.00 0.00 O ATOM 824 CB ASN 100 39.524 39.945 28.258 1.00 0.00 C ATOM 825 CG ASN 100 40.014 40.834 29.340 1.00 0.00 C ATOM 826 OD1 ASN 100 40.552 41.912 29.073 1.00 0.00 O ATOM 827 ND2 ASN 100 39.830 40.398 30.577 1.00 0.00 N ATOM 828 N GLN 101 42.204 39.044 25.550 1.00 0.00 N ATOM 829 CA GLN 101 43.642 38.635 25.522 1.00 0.00 C ATOM 830 C GLN 101 44.679 39.285 24.513 1.00 0.00 C ATOM 831 O GLN 101 45.635 38.537 24.141 1.00 0.00 O ATOM 832 CB GLN 101 44.000 37.175 25.666 1.00 0.00 C ATOM 833 CG GLN 101 43.454 36.469 26.850 1.00 0.00 C ATOM 834 CD GLN 101 44.078 35.149 27.144 1.00 0.00 C ATOM 835 OE1 GLN 101 43.436 34.204 27.595 1.00 0.00 O ATOM 836 NE2 GLN 101 45.362 34.974 26.895 1.00 0.00 N ATOM 837 N THR 102 44.514 40.476 23.872 1.00 0.00 N ATOM 838 CA THR 102 45.563 41.062 23.041 1.00 0.00 C ATOM 839 C THR 102 46.054 40.033 21.952 1.00 0.00 C ATOM 840 O THR 102 45.287 39.593 21.081 1.00 0.00 O ATOM 841 CB THR 102 46.670 41.637 23.993 1.00 0.00 C ATOM 842 OG1 THR 102 47.624 42.528 23.308 1.00 0.00 O ATOM 843 CG2 THR 102 47.486 40.536 24.722 1.00 0.00 C ATOM 844 N GLY 103 47.399 39.845 21.947 1.00 0.00 N ATOM 845 CA GLY 103 48.120 38.920 21.155 1.00 0.00 C ATOM 846 C GLY 103 47.746 39.228 19.724 1.00 0.00 C ATOM 847 O GLY 103 48.224 40.262 19.191 1.00 0.00 O ATOM 848 N TRP 104 47.533 38.161 19.028 1.00 0.00 N ATOM 849 CA TRP 104 47.259 38.288 17.608 1.00 0.00 C ATOM 850 C TRP 104 45.865 37.753 17.077 1.00 0.00 C ATOM 851 O TRP 104 45.674 37.866 15.849 1.00 0.00 O ATOM 852 CB TRP 104 48.425 37.576 16.863 1.00 0.00 C ATOM 853 CG TRP 104 49.160 38.367 15.748 1.00 0.00 C ATOM 854 CD1 TRP 104 49.028 39.739 15.699 1.00 0.00 C ATOM 855 CD2 TRP 104 50.033 37.894 14.768 1.00 0.00 C ATOM 856 NE1 TRP 104 49.814 40.124 14.712 1.00 0.00 N ATOM 857 CE2 TRP 104 50.429 39.080 14.144 1.00 0.00 C ATOM 858 CE3 TRP 104 50.564 36.693 14.312 1.00 0.00 C ATOM 859 CZ2 TRP 104 51.334 39.111 13.107 1.00 0.00 C ATOM 860 CZ3 TRP 104 51.474 36.709 13.271 1.00 0.00 C ATOM 861 CH2 TRP 104 51.861 37.909 12.670 1.00 0.00 H ATOM 862 N ASP 105 44.891 37.410 17.915 1.00 0.00 N ATOM 863 CA ASP 105 43.683 36.844 17.334 1.00 0.00 C ATOM 864 C ASP 105 42.447 37.825 17.453 1.00 0.00 C ATOM 865 O ASP 105 41.436 37.348 17.964 1.00 0.00 O ATOM 866 CB ASP 105 43.458 35.418 17.843 1.00 0.00 C ATOM 867 CG ASP 105 42.480 34.617 17.020 1.00 0.00 C ATOM 868 OD1 ASP 105 42.667 34.623 15.815 1.00 0.00 O ATOM 869 OD2 ASP 105 41.569 33.964 17.546 1.00 0.00 O ATOM 870 N ALA 106 42.313 38.503 16.346 1.00 0.00 N ATOM 871 CA ALA 106 41.326 39.551 16.072 1.00 0.00 C ATOM 872 C ALA 106 40.673 39.160 14.762 1.00 0.00 C ATOM 873 O ALA 106 41.374 39.250 13.728 1.00 0.00 O ATOM 874 CB ALA 106 41.917 40.943 15.862 1.00 0.00 C ATOM 875 N TYR 107 39.460 38.696 14.756 1.00 0.00 N ATOM 876 CA TYR 107 38.895 38.407 13.505 1.00 0.00 C ATOM 877 C TYR 107 38.267 39.692 12.974 1.00 0.00 C ATOM 878 O TYR 107 37.462 40.329 13.683 1.00 0.00 O ATOM 879 CB TYR 107 38.044 37.189 13.486 1.00 0.00 C ATOM 880 CG TYR 107 37.962 36.532 12.130 1.00 0.00 C ATOM 881 CD1 TYR 107 37.258 37.200 11.160 1.00 0.00 C ATOM 882 CD2 TYR 107 38.667 35.374 11.789 1.00 0.00 C ATOM 883 CE1 TYR 107 37.219 36.759 9.869 1.00 0.00 C ATOM 884 CE2 TYR 107 38.632 34.915 10.482 1.00 0.00 C ATOM 885 CZ TYR 107 37.903 35.636 9.531 1.00 0.00 C ATOM 886 OH TYR 107 37.800 35.312 8.192 1.00 0.00 H ATOM 887 N VAL 108 38.929 40.190 11.922 1.00 0.00 N ATOM 888 CA VAL 108 38.525 41.415 11.218 1.00 0.00 C ATOM 889 C VAL 108 38.667 42.717 12.110 1.00 0.00 C ATOM 890 O VAL 108 37.644 43.425 12.389 1.00 0.00 O ATOM 891 CB VAL 108 37.101 41.341 10.633 1.00 0.00 C ATOM 892 CG1 VAL 108 36.828 42.646 9.830 1.00 0.00 C ATOM 893 CG2 VAL 108 37.005 40.143 9.664 1.00 0.00 C ATOM 894 N GLN 109 39.876 42.844 12.723 1.00 0.00 N ATOM 895 CA GLN 109 40.181 43.995 13.520 1.00 0.00 C ATOM 896 C GLN 109 39.210 44.212 14.727 1.00 0.00 C ATOM 897 O GLN 109 38.858 45.401 14.990 1.00 0.00 O ATOM 898 CB GLN 109 40.130 45.244 12.721 1.00 0.00 C ATOM 899 CG GLN 109 40.697 45.406 11.376 1.00 0.00 C ATOM 900 CD GLN 109 42.226 45.385 11.460 1.00 0.00 C ATOM 901 OE1 GLN 109 42.813 46.494 11.331 1.00 0.00 O ATOM 902 NE2 GLN 109 42.770 44.164 11.691 1.00 0.00 N ATOM 903 N SER 110 38.633 43.211 15.318 1.00 0.00 N ATOM 904 CA SER 110 37.874 43.471 16.472 1.00 0.00 C ATOM 905 C SER 110 38.767 43.627 17.752 1.00 0.00 C ATOM 906 O SER 110 39.799 42.905 17.795 1.00 0.00 O ATOM 907 CB SER 110 36.755 42.385 16.552 1.00 0.00 C ATOM 908 OG SER 110 37.140 41.015 16.311 1.00 0.00 O ATOM 909 N CYS 111 38.868 44.888 18.137 1.00 0.00 N ATOM 910 CA CYS 111 39.628 45.162 19.332 1.00 0.00 C ATOM 911 C CYS 111 38.915 44.402 20.486 1.00 0.00 C ATOM 912 O CYS 111 37.790 44.735 20.830 1.00 0.00 O ATOM 913 CB CYS 111 39.775 46.652 19.566 1.00 0.00 C ATOM 914 SG CYS 111 40.841 47.441 18.375 1.00 0.00 S ATOM 915 N ARG 112 39.661 43.523 21.130 1.00 0.00 N ATOM 916 CA ARG 112 39.199 42.645 22.146 1.00 0.00 C ATOM 917 C ARG 112 38.417 43.544 23.165 1.00 0.00 C ATOM 918 O ARG 112 38.979 44.563 23.655 1.00 0.00 O ATOM 919 CB ARG 112 40.472 42.192 22.841 1.00 0.00 C ATOM 920 CG ARG 112 41.294 41.183 22.022 1.00 0.00 C ATOM 921 CD ARG 112 42.408 41.914 21.241 1.00 0.00 C ATOM 922 NE ARG 112 43.142 40.982 20.377 1.00 0.00 N ATOM 923 CZ ARG 112 43.390 41.209 19.101 1.00 0.00 C ATOM 924 NH1 ARG 112 42.980 42.328 18.537 1.00 0.00 H ATOM 925 NH2 ARG 112 44.067 40.327 18.392 1.00 0.00 H ATOM 926 N ALA 113 37.220 43.117 23.646 1.00 0.00 N ATOM 927 CA ALA 113 36.311 43.872 24.512 1.00 0.00 C ATOM 928 C ALA 113 37.063 44.591 25.625 1.00 0.00 C ATOM 929 O ALA 113 36.956 45.832 25.643 1.00 0.00 O ATOM 930 CB ALA 113 35.378 42.836 25.217 1.00 0.00 C ATOM 931 N ILE 114 37.800 43.893 26.511 1.00 0.00 N ATOM 932 CA ILE 114 38.563 44.653 27.473 1.00 0.00 C ATOM 933 C ILE 114 39.880 44.978 26.834 1.00 0.00 C ATOM 934 O ILE 114 39.767 45.859 25.976 1.00 0.00 O ATOM 935 CB ILE 114 38.634 44.016 28.859 1.00 0.00 C ATOM 936 CG1 ILE 114 37.332 43.643 29.497 1.00 0.00 C ATOM 937 CG2 ILE 114 39.438 44.898 29.854 1.00 0.00 C ATOM 938 CD1 ILE 114 37.592 42.661 30.664 1.00 0.00 C ATOM 939 N TRP 115 40.834 44.003 26.822 1.00 0.00 N ATOM 940 CA TRP 115 42.102 44.180 26.158 1.00 0.00 C ATOM 941 C TRP 115 42.361 45.695 26.043 1.00 0.00 C ATOM 942 O TRP 115 43.132 46.258 26.833 1.00 0.00 O ATOM 943 CB TRP 115 42.309 43.287 24.906 1.00 0.00 C ATOM 944 CG TRP 115 43.298 43.814 23.900 1.00 0.00 C ATOM 945 CD1 TRP 115 44.619 43.538 24.103 1.00 0.00 C ATOM 946 CD2 TRP 115 43.066 44.484 22.717 1.00 0.00 C ATOM 947 NE1 TRP 115 45.234 44.023 23.055 1.00 0.00 N ATOM 948 CE2 TRP 115 44.362 44.591 22.204 1.00 0.00 C ATOM 949 CE3 TRP 115 42.000 45.013 21.990 1.00 0.00 C ATOM 950 CZ2 TRP 115 44.603 45.221 20.980 1.00 0.00 C ATOM 951 CZ3 TRP 115 42.233 45.641 20.766 1.00 0.00 C ATOM 952 CH2 TRP 115 43.526 45.742 20.264 1.00 0.00 H ATOM 953 N ASN 116 42.185 46.059 24.775 1.00 0.00 N ATOM 954 CA ASN 116 42.249 47.359 24.256 1.00 0.00 C ATOM 955 C ASN 116 43.534 48.083 24.635 1.00 0.00 C ATOM 956 O ASN 116 43.435 48.957 25.499 1.00 0.00 O ATOM 957 CB ASN 116 41.031 48.170 24.769 1.00 0.00 C ATOM 958 CG ASN 116 39.789 47.811 23.986 1.00 0.00 C ATOM 959 OD1 ASN 116 38.696 48.268 24.317 1.00 0.00 O ATOM 960 ND2 ASN 116 39.914 47.013 22.940 1.00 0.00 N ATOM 961 N ASP 117 44.716 47.575 24.363 1.00 0.00 N ATOM 962 CA ASP 117 45.886 48.332 24.860 1.00 0.00 C ATOM 963 C ASP 117 46.126 49.486 23.842 1.00 0.00 C ATOM 964 O ASP 117 46.638 49.296 22.734 1.00 0.00 O ATOM 965 CB ASP 117 47.028 47.327 24.990 1.00 0.00 C ATOM 966 CG ASP 117 48.387 47.909 25.212 1.00 0.00 C ATOM 967 OD1 ASP 117 48.567 49.041 25.697 1.00 0.00 O ATOM 968 OD2 ASP 117 49.303 47.163 24.867 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 739 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 91.67 28.4 176 100.0 176 ARMSMC SECONDARY STRUCTURE . . 96.61 32.1 84 100.0 84 ARMSMC SURFACE . . . . . . . . 90.47 22.6 106 100.0 106 ARMSMC BURIED . . . . . . . . 93.47 37.1 70 100.0 70 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 82.74 42.3 78 100.0 78 ARMSSC1 RELIABLE SIDE CHAINS . 78.14 45.7 70 100.0 70 ARMSSC1 SECONDARY STRUCTURE . . 76.35 44.4 36 100.0 36 ARMSSC1 SURFACE . . . . . . . . 86.33 38.8 49 100.0 49 ARMSSC1 BURIED . . . . . . . . 76.29 48.3 29 100.0 29 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 72.48 40.0 60 100.0 60 ARMSSC2 RELIABLE SIDE CHAINS . 66.30 43.4 53 100.0 53 ARMSSC2 SECONDARY STRUCTURE . . 82.23 35.7 28 100.0 28 ARMSSC2 SURFACE . . . . . . . . 66.49 40.5 37 100.0 37 ARMSSC2 BURIED . . . . . . . . 81.19 39.1 23 100.0 23 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 95.58 18.5 27 100.0 27 ARMSSC3 RELIABLE SIDE CHAINS . 93.25 23.5 17 100.0 17 ARMSSC3 SECONDARY STRUCTURE . . 84.08 18.2 11 100.0 11 ARMSSC3 SURFACE . . . . . . . . 97.09 13.6 22 100.0 22 ARMSSC3 BURIED . . . . . . . . 88.66 40.0 5 100.0 5 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 90.36 33.3 12 100.0 12 ARMSSC4 RELIABLE SIDE CHAINS . 90.36 33.3 12 100.0 12 ARMSSC4 SECONDARY STRUCTURE . . 68.01 50.0 4 100.0 4 ARMSSC4 SURFACE . . . . . . . . 90.37 40.0 10 100.0 10 ARMSSC4 BURIED . . . . . . . . 90.28 0.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 14.29 (Number of atoms: 89) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 14.29 89 100.0 89 CRMSCA CRN = ALL/NP . . . . . 0.1606 CRMSCA SECONDARY STRUCTURE . . 13.92 42 100.0 42 CRMSCA SURFACE . . . . . . . . 14.25 54 100.0 54 CRMSCA BURIED . . . . . . . . 14.36 35 100.0 35 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 14.36 439 100.0 439 CRMSMC SECONDARY STRUCTURE . . 13.94 207 100.0 207 CRMSMC SURFACE . . . . . . . . 14.24 268 100.0 268 CRMSMC BURIED . . . . . . . . 14.54 171 100.0 171 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 15.84 383 100.0 383 CRMSSC RELIABLE SIDE CHAINS . 15.70 333 100.0 333 CRMSSC SECONDARY STRUCTURE . . 15.74 192 100.0 192 CRMSSC SURFACE . . . . . . . . 16.40 225 100.0 225 CRMSSC BURIED . . . . . . . . 15.02 158 100.0 158 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 15.10 739 100.0 739 CRMSALL SECONDARY STRUCTURE . . 14.88 360 100.0 360 CRMSALL SURFACE . . . . . . . . 15.31 441 100.0 441 CRMSALL BURIED . . . . . . . . 14.77 298 100.0 298 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 13.208 1.000 0.500 89 100.0 89 ERRCA SECONDARY STRUCTURE . . 12.973 1.000 0.500 42 100.0 42 ERRCA SURFACE . . . . . . . . 12.920 1.000 0.500 54 100.0 54 ERRCA BURIED . . . . . . . . 13.653 1.000 0.500 35 100.0 35 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 13.282 1.000 0.500 439 100.0 439 ERRMC SECONDARY STRUCTURE . . 12.988 1.000 0.500 207 100.0 207 ERRMC SURFACE . . . . . . . . 12.937 1.000 0.500 268 100.0 268 ERRMC BURIED . . . . . . . . 13.823 1.000 0.500 171 100.0 171 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 14.736 1.000 0.500 383 100.0 383 ERRSC RELIABLE SIDE CHAINS . 14.635 1.000 0.500 333 100.0 333 ERRSC SECONDARY STRUCTURE . . 14.782 1.000 0.500 192 100.0 192 ERRSC SURFACE . . . . . . . . 14.963 1.000 0.500 225 100.0 225 ERRSC BURIED . . . . . . . . 14.413 1.000 0.500 158 100.0 158 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 13.995 1.000 0.500 739 100.0 739 ERRALL SECONDARY STRUCTURE . . 13.900 1.000 0.500 360 100.0 360 ERRALL SURFACE . . . . . . . . 13.909 1.000 0.500 441 100.0 441 ERRALL BURIED . . . . . . . . 14.121 1.000 0.500 298 100.0 298 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 2 8 31 89 89 DISTCA CA (P) 0.00 0.00 2.25 8.99 34.83 89 DISTCA CA (RMS) 0.00 0.00 2.43 3.47 7.38 DISTCA ALL (N) 2 6 17 52 192 739 739 DISTALL ALL (P) 0.27 0.81 2.30 7.04 25.98 739 DISTALL ALL (RMS) 0.80 1.45 2.26 3.51 7.07 DISTALL END of the results output