####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 89 ( 740), selected 89 , name T0608TS065_1-D1 # Molecule2: number of CA atoms 89 ( 739), selected 89 , name T0608-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0608TS065_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 40 45 - 84 4.97 14.01 LONGEST_CONTINUOUS_SEGMENT: 40 46 - 85 4.90 14.10 LCS_AVERAGE: 38.37 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 101 - 117 1.42 15.80 LCS_AVERAGE: 14.43 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 101 - 115 0.95 15.93 LCS_AVERAGE: 10.76 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 89 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT V 29 V 29 3 9 23 0 3 3 4 4 6 8 10 12 13 17 18 20 23 24 30 31 34 36 39 LCS_GDT S 30 S 30 9 10 23 8 8 9 9 9 9 9 10 13 18 21 23 29 29 30 31 32 34 39 41 LCS_GDT G 31 G 31 9 10 23 8 8 9 9 9 10 14 15 18 20 23 25 29 29 30 31 32 34 39 41 LCS_GDT F 32 F 32 9 10 23 8 8 9 9 9 11 15 16 18 20 23 25 29 29 30 31 32 34 39 41 LCS_GDT Q 33 Q 33 9 10 23 8 8 9 9 9 9 15 16 17 20 23 25 29 29 30 31 32 34 39 41 LCS_GDT R 34 R 34 9 10 23 8 8 9 9 9 11 15 16 18 20 23 25 29 29 30 31 32 34 37 41 LCS_GDT L 35 L 35 9 10 23 8 8 9 9 9 12 12 15 18 20 23 25 29 29 30 31 32 34 37 38 LCS_GDT Q 36 Q 36 9 10 23 8 8 9 9 9 9 9 11 16 20 23 25 29 29 30 31 32 34 36 39 LCS_GDT K 37 K 37 9 10 23 8 8 9 9 9 12 15 16 18 20 23 25 29 29 30 31 32 34 37 39 LCS_GDT P 38 P 38 9 11 23 3 7 9 10 12 13 13 13 14 19 23 25 29 29 30 31 32 34 37 39 LCS_GDT V 39 V 39 6 11 23 3 5 7 10 12 13 13 16 18 20 23 25 29 29 30 31 35 40 44 48 LCS_GDT V 40 V 40 9 11 23 3 5 8 10 12 13 15 16 18 20 23 25 29 29 30 31 32 38 42 47 LCS_GDT S 41 S 41 9 11 23 3 5 8 10 12 13 15 16 18 20 23 25 29 29 30 31 35 40 44 48 LCS_GDT Q 42 Q 42 9 11 23 7 8 8 10 12 13 15 16 18 20 23 25 29 29 37 41 44 47 49 51 LCS_GDT P 43 P 43 9 11 23 7 8 8 10 12 13 13 14 17 21 26 31 38 42 44 46 48 50 52 55 LCS_GDT D 44 D 44 9 11 23 7 8 8 10 12 13 13 14 17 20 25 30 38 42 44 46 48 50 52 55 LCS_GDT F 45 F 45 9 11 40 7 8 8 10 12 13 15 16 18 20 25 30 37 42 44 46 48 50 52 55 LCS_GDT R 46 R 46 9 11 40 7 8 8 10 12 13 15 16 18 22 27 33 38 42 44 46 48 50 52 55 LCS_GDT R 47 R 47 9 11 40 7 8 8 10 12 15 20 24 30 33 37 39 40 42 44 46 48 50 52 55 LCS_GDT Q 48 Q 48 9 11 40 7 8 8 10 12 15 20 25 30 33 37 39 40 42 44 46 48 50 52 55 LCS_GDT P 49 P 49 4 10 40 3 4 7 11 14 20 23 26 30 33 37 39 40 42 44 46 48 50 52 55 LCS_GDT V 50 V 50 4 10 40 3 4 8 9 13 17 22 25 30 33 37 39 40 42 44 46 48 50 52 55 LCS_GDT S 51 S 51 9 10 40 8 9 10 10 10 12 13 15 18 25 33 34 40 42 43 44 48 50 52 55 LCS_GDT E 52 E 52 9 10 40 8 9 10 10 10 12 14 15 20 28 33 34 38 42 43 44 46 49 52 55 LCS_GDT T 53 T 53 9 10 40 8 9 10 11 18 21 24 26 28 31 35 38 40 42 43 44 46 49 52 55 LCS_GDT M 54 M 54 9 10 40 8 9 10 11 18 21 24 26 30 33 37 39 40 42 44 46 48 50 52 55 LCS_GDT Q 55 Q 55 9 10 40 8 9 10 10 11 16 24 26 30 33 37 39 40 42 44 46 48 50 52 55 LCS_GDT V 56 V 56 9 10 40 8 9 10 11 18 21 24 26 30 33 37 39 40 42 43 44 46 49 52 55 LCS_GDT Y 57 Y 57 9 10 40 8 9 10 10 13 21 24 26 30 33 37 39 40 42 43 44 46 49 52 55 LCS_GDT L 58 L 58 9 10 40 8 9 10 10 10 12 20 25 30 33 37 39 40 42 44 46 48 50 52 55 LCS_GDT K 59 K 59 9 10 40 4 9 10 11 18 21 24 26 30 33 37 39 40 42 44 46 48 50 52 55 LCS_GDT Q 60 Q 60 4 10 40 3 6 7 11 16 21 24 26 30 33 37 39 40 42 44 45 48 50 52 55 LCS_GDT A 61 A 61 4 11 40 3 4 4 8 18 21 24 26 30 33 37 39 40 42 44 45 48 50 52 55 LCS_GDT A 62 A 62 9 12 40 3 8 9 9 10 10 15 23 27 33 37 39 40 42 44 46 48 50 52 55 LCS_GDT D 63 D 63 9 14 40 6 8 9 10 18 21 24 26 30 33 37 39 40 42 44 46 48 50 52 55 LCS_GDT P 64 P 64 9 14 40 6 8 9 11 18 21 24 26 30 33 37 39 40 42 44 46 48 50 52 55 LCS_GDT G 65 G 65 9 14 40 6 8 9 11 18 21 24 26 30 33 37 39 40 42 44 46 48 50 52 55 LCS_GDT R 66 R 66 9 14 40 6 8 9 11 18 21 24 26 30 33 37 39 40 42 44 46 48 50 52 55 LCS_GDT D 67 D 67 9 14 40 6 8 9 11 18 21 24 26 30 33 37 39 40 42 44 46 48 50 52 55 LCS_GDT V 68 V 68 9 14 40 6 8 9 11 15 19 24 26 30 33 37 39 40 42 44 46 48 50 52 55 LCS_GDT G 69 G 69 9 14 40 6 8 9 11 18 21 24 26 30 33 37 39 40 42 44 46 48 50 52 55 LCS_GDT L 70 L 70 9 14 40 4 8 9 11 18 21 24 26 30 33 37 39 40 42 44 46 48 50 52 55 LCS_GDT Y 71 Y 71 6 14 40 4 5 7 11 18 21 24 26 30 33 37 39 40 42 44 46 48 50 52 55 LCS_GDT W 72 W 72 6 14 40 4 14 15 16 18 21 24 26 30 33 37 39 40 42 44 46 48 50 52 55 LCS_GDT M 73 M 73 6 14 40 4 6 7 11 18 21 24 26 30 33 37 39 40 42 44 46 48 50 52 55 LCS_GDT A 74 A 74 6 14 40 4 5 7 11 18 21 24 26 30 33 37 39 40 42 44 46 48 50 52 55 LCS_GDT T 75 T 75 5 14 40 4 5 12 12 18 21 24 26 28 31 37 39 40 42 44 46 48 50 52 55 LCS_GDT D 76 D 76 5 14 40 4 5 7 11 17 21 24 26 30 33 37 39 40 42 44 46 48 50 52 55 LCS_GDT F 77 F 77 4 8 40 4 4 4 5 12 13 17 25 30 33 37 39 40 42 44 46 48 50 52 55 LCS_GDT E 78 E 78 4 8 40 4 4 4 7 8 10 15 24 30 33 37 39 40 42 44 46 48 50 52 55 LCS_GDT N 79 N 79 4 8 40 4 4 4 6 9 12 20 25 30 33 37 39 40 42 44 46 48 50 52 55 LCS_GDT R 80 R 80 4 8 40 4 4 10 10 12 13 17 24 30 33 37 39 40 42 44 46 48 50 52 55 LCS_GDT R 81 R 81 4 8 40 3 4 5 7 8 10 20 25 30 33 37 39 40 42 44 46 48 50 52 55 LCS_GDT F 82 F 82 4 8 40 3 4 5 7 8 9 13 21 29 33 37 39 40 42 44 46 48 50 52 55 LCS_GDT P 83 P 83 4 8 40 3 4 5 7 8 9 13 21 29 33 37 39 40 42 44 46 48 50 52 55 LCS_GDT G 84 G 84 4 8 40 4 4 5 7 8 9 12 21 27 32 35 39 40 42 44 46 48 50 52 55 LCS_GDT K 85 K 85 4 15 40 4 4 5 7 8 9 15 15 19 24 29 34 38 42 44 46 48 50 52 55 LCS_GDT V 86 V 86 14 15 39 6 11 13 14 14 14 15 17 21 25 27 31 36 38 43 46 48 50 52 55 LCS_GDT S 87 S 87 14 15 32 6 11 13 14 14 14 15 17 21 26 30 34 36 38 39 40 44 45 46 47 LCS_GDT P 88 P 88 14 15 32 8 11 13 14 14 14 15 17 21 27 32 35 36 38 39 40 44 45 46 47 LCS_GDT S 89 S 89 14 15 32 6 11 13 14 14 14 15 22 26 30 33 35 36 38 39 40 44 45 46 47 LCS_GDT G 90 G 90 14 15 32 7 11 13 14 14 14 15 17 23 29 33 35 36 38 43 46 48 50 52 55 LCS_GDT F 91 F 91 14 15 32 8 11 13 14 14 14 15 19 26 30 33 35 36 39 43 46 48 50 52 55 LCS_GDT Q 92 Q 92 14 15 32 8 11 13 14 14 17 20 25 27 30 33 35 36 38 39 41 45 47 51 55 LCS_GDT K 93 K 93 14 15 32 8 11 13 14 14 14 23 25 27 30 33 35 36 38 43 45 48 50 52 55 LCS_GDT L 94 L 94 14 15 32 8 11 13 14 14 16 23 25 27 30 33 35 38 42 44 46 48 50 52 55 LCS_GDT Y 95 Y 95 14 15 32 8 11 13 14 16 19 23 25 27 30 33 35 38 42 44 46 48 50 52 55 LCS_GDT R 96 R 96 14 15 32 8 11 13 15 16 18 22 25 27 30 33 35 36 40 43 46 48 50 52 55 LCS_GDT Q 97 Q 97 14 15 32 8 11 13 14 14 18 21 25 27 30 33 35 38 42 44 46 48 50 52 55 LCS_GDT W 98 W 98 14 15 32 3 11 13 15 16 19 23 25 27 30 33 36 38 42 44 46 48 50 52 55 LCS_GDT R 99 R 99 14 15 32 3 7 13 14 14 14 15 18 23 27 32 36 38 42 44 46 48 50 52 55 LCS_GDT N 100 N 100 4 16 32 3 5 7 9 11 18 22 25 27 30 33 36 39 42 44 46 48 50 52 55 LCS_GDT Q 101 Q 101 15 17 32 4 4 15 16 17 19 23 25 30 33 37 39 40 41 43 45 46 49 52 55 LCS_GDT T 102 T 102 15 17 32 4 4 8 16 17 21 24 26 30 33 37 39 40 42 43 44 46 49 52 52 LCS_GDT G 103 G 103 15 17 32 6 14 15 16 18 21 24 26 30 33 37 39 40 42 43 44 45 49 52 52 LCS_GDT W 104 W 104 15 17 32 5 14 15 16 17 20 24 26 30 33 37 39 40 42 43 44 46 49 52 54 LCS_GDT D 105 D 105 15 17 32 8 14 15 16 17 19 23 25 27 30 33 37 39 42 43 44 44 49 52 52 LCS_GDT A 106 A 106 15 17 32 9 14 15 16 17 19 23 25 27 30 33 35 38 42 43 44 44 45 47 47 LCS_GDT Y 107 Y 107 15 17 32 9 14 15 16 17 19 23 25 27 31 33 37 39 42 43 44 44 45 47 51 LCS_GDT V 108 V 108 15 17 32 9 14 15 16 17 19 23 25 27 30 33 35 36 38 39 44 44 45 47 51 LCS_GDT Q 109 Q 109 15 17 32 9 14 15 16 17 19 23 25 27 30 33 35 36 38 39 40 44 45 46 47 LCS_GDT S 110 S 110 15 17 32 9 14 15 16 17 19 23 25 27 30 33 35 36 38 39 40 44 45 46 47 LCS_GDT C 111 C 111 15 17 32 9 14 15 16 17 19 23 25 27 30 33 35 36 38 39 40 44 45 46 47 LCS_GDT R 112 R 112 15 17 32 9 14 15 16 17 19 23 25 27 30 33 35 36 38 39 40 44 45 46 47 LCS_GDT A 113 A 113 15 17 32 9 14 15 16 17 19 23 25 27 30 33 35 36 38 39 40 44 45 46 47 LCS_GDT I 114 I 114 15 17 32 5 14 15 16 17 19 23 25 27 30 33 35 36 38 39 40 44 45 46 47 LCS_GDT W 115 W 115 15 17 32 9 14 15 16 17 19 23 25 27 30 33 35 36 38 39 40 44 45 46 47 LCS_GDT N 116 N 116 5 17 32 3 4 5 10 12 16 23 24 27 30 33 35 36 38 39 40 44 45 46 47 LCS_GDT D 117 D 117 3 17 32 0 10 13 15 17 19 23 25 27 30 33 35 36 38 39 40 44 45 46 46 LCS_AVERAGE LCS_A: 21.18 ( 10.76 14.43 38.37 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 14 15 16 18 21 24 26 30 33 37 39 40 42 44 46 48 50 52 55 GDT PERCENT_AT 10.11 15.73 16.85 17.98 20.22 23.60 26.97 29.21 33.71 37.08 41.57 43.82 44.94 47.19 49.44 51.69 53.93 56.18 58.43 61.80 GDT RMS_LOCAL 0.31 0.63 0.83 0.98 2.00 2.13 2.31 2.48 3.16 3.38 3.72 3.90 4.00 4.36 5.21 5.72 5.79 6.02 6.25 6.61 GDT RMS_ALL_AT 15.78 15.94 15.98 16.02 15.54 15.41 15.37 15.21 14.62 14.52 14.44 14.30 14.37 14.68 13.74 13.61 13.76 13.76 13.91 14.05 # Checking swapping # possible swapping detected: D 44 D 44 # possible swapping detected: F 45 F 45 # possible swapping detected: Y 57 Y 57 # possible swapping detected: Y 71 Y 71 # possible swapping detected: D 76 D 76 # possible swapping detected: E 78 E 78 # possible swapping detected: F 91 F 91 # possible swapping detected: Y 95 Y 95 # possible swapping detected: Y 107 Y 107 # possible swapping detected: D 117 D 117 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA V 29 V 29 21.317 0 0.606 0.899 25.258 0.000 0.000 LGA S 30 S 30 20.977 0 0.573 0.538 23.687 0.000 0.000 LGA G 31 G 31 19.280 0 0.085 0.085 20.268 0.000 0.000 LGA F 32 F 32 18.332 0 0.031 0.427 20.885 0.000 0.000 LGA Q 33 Q 33 22.209 0 0.042 1.171 26.446 0.000 0.000 LGA R 34 R 34 24.860 0 0.038 0.153 27.978 0.000 0.000 LGA L 35 L 35 23.636 0 0.078 0.207 25.965 0.000 0.000 LGA Q 36 Q 36 25.852 0 0.132 0.804 29.067 0.000 0.000 LGA K 37 K 37 30.547 0 0.582 0.904 34.331 0.000 0.000 LGA P 38 P 38 31.300 0 0.641 0.636 34.284 0.000 0.000 LGA V 39 V 39 24.491 0 0.112 0.116 26.900 0.000 0.000 LGA V 40 V 40 26.810 0 0.081 1.019 30.287 0.000 0.000 LGA S 41 S 41 30.369 0 0.150 0.620 34.167 0.000 0.000 LGA Q 42 Q 42 25.655 0 0.019 1.387 29.097 0.000 0.000 LGA P 43 P 43 20.878 0 0.069 0.081 24.902 0.000 0.000 LGA D 44 D 44 16.879 0 0.063 1.096 19.299 0.000 0.000 LGA F 45 F 45 16.960 0 0.062 1.580 22.582 0.000 0.000 LGA R 46 R 46 17.266 0 0.055 1.151 28.929 0.000 0.000 LGA R 47 R 47 11.117 0 0.123 1.423 13.528 2.143 0.779 LGA Q 48 Q 48 8.290 0 0.432 0.759 13.097 6.429 3.016 LGA P 49 P 49 3.921 0 0.190 0.239 4.868 40.357 43.673 LGA V 50 V 50 5.586 0 0.604 1.343 9.364 21.786 14.694 LGA S 51 S 51 6.350 0 0.594 0.557 7.334 24.048 19.921 LGA E 52 E 52 6.038 0 0.085 0.326 8.536 25.714 15.079 LGA T 53 T 53 2.973 0 0.068 1.140 5.562 65.833 55.034 LGA M 54 M 54 1.749 0 0.073 1.010 3.871 69.048 61.429 LGA Q 55 Q 55 3.565 0 0.035 1.145 5.763 57.500 43.386 LGA V 56 V 56 2.082 0 0.029 1.139 6.669 68.810 54.558 LGA Y 57 Y 57 3.566 0 0.057 1.403 13.395 46.429 21.468 LGA L 58 L 58 5.016 0 0.034 0.197 8.774 33.214 21.905 LGA K 59 K 59 1.829 0 0.549 0.784 6.744 69.405 50.370 LGA Q 60 Q 60 2.064 0 0.167 1.265 7.095 73.095 45.503 LGA A 61 A 61 2.810 0 0.626 0.583 5.067 56.071 50.095 LGA A 62 A 62 5.611 0 0.639 0.601 7.998 29.048 24.667 LGA D 63 D 63 2.858 0 0.143 0.171 3.635 57.500 60.179 LGA P 64 P 64 1.699 0 0.043 0.359 2.210 75.000 71.769 LGA G 65 G 65 1.128 0 0.038 0.038 1.182 85.952 85.952 LGA R 66 R 66 1.040 0 0.070 1.075 4.011 88.214 70.216 LGA D 67 D 67 2.216 0 0.055 0.065 4.964 67.024 52.917 LGA V 68 V 68 3.221 0 0.044 0.976 3.964 53.810 49.320 LGA G 69 G 69 2.594 0 0.060 0.060 2.716 60.952 60.952 LGA L 70 L 70 1.903 0 0.066 0.797 2.996 70.833 67.857 LGA Y 71 Y 71 2.037 0 0.110 0.446 5.918 70.833 50.556 LGA W 72 W 72 1.260 0 0.056 1.386 4.590 83.690 62.993 LGA M 73 M 73 1.216 0 0.057 1.462 7.980 77.381 56.607 LGA A 74 A 74 2.521 0 0.028 0.033 3.361 59.286 58.857 LGA T 75 T 75 2.692 0 0.219 1.079 5.066 64.881 57.211 LGA D 76 D 76 2.245 0 0.335 1.025 4.687 51.548 55.119 LGA F 77 F 77 7.863 0 0.330 1.005 11.462 11.310 4.156 LGA E 78 E 78 7.553 0 0.318 1.215 11.101 5.952 3.228 LGA N 79 N 79 9.476 0 0.665 0.727 15.297 2.976 1.488 LGA R 80 R 80 8.192 0 0.622 1.233 15.945 3.810 1.429 LGA R 81 R 81 7.789 0 0.045 1.039 9.672 10.119 5.714 LGA F 82 F 82 7.900 0 0.117 1.284 8.114 5.952 9.740 LGA P 83 P 83 7.507 0 0.666 0.702 7.532 11.429 11.293 LGA G 84 G 84 8.660 0 0.427 0.427 10.008 1.548 1.548 LGA K 85 K 85 13.003 1 0.030 0.606 16.120 0.000 0.000 LGA V 86 V 86 15.256 0 0.286 0.974 19.261 0.000 0.000 LGA S 87 S 87 20.773 0 0.043 0.102 21.939 0.000 0.000 LGA P 88 P 88 22.774 0 0.089 0.094 26.398 0.000 0.000 LGA S 89 S 89 22.442 0 0.047 0.123 23.816 0.000 0.000 LGA G 90 G 90 15.520 0 0.062 0.062 18.108 0.000 0.000 LGA F 91 F 91 14.639 0 0.035 1.394 15.708 0.000 0.000 LGA Q 92 Q 92 19.367 0 0.048 1.130 25.248 0.000 0.000 LGA K 93 K 93 17.429 0 0.056 1.050 18.896 0.000 0.000 LGA L 94 L 94 11.703 0 0.029 1.420 13.547 0.000 0.893 LGA Y 95 Y 95 14.586 0 0.052 1.377 20.389 0.000 0.000 LGA R 96 R 96 19.405 0 0.065 0.884 29.924 0.000 0.000 LGA Q 97 Q 97 15.961 0 0.236 1.462 18.567 0.000 0.000 LGA W 98 W 98 11.442 0 0.649 1.425 12.938 0.000 0.476 LGA R 99 R 99 14.415 0 0.118 0.877 25.740 0.000 0.000 LGA N 100 N 100 12.470 0 0.563 0.572 17.336 0.476 0.238 LGA Q 101 Q 101 6.853 0 0.620 1.363 9.133 22.381 13.228 LGA T 102 T 102 2.636 0 0.621 0.989 6.243 50.595 39.728 LGA G 103 G 103 2.470 0 0.087 0.087 3.342 65.119 65.119 LGA W 104 W 104 3.122 0 0.059 1.619 12.769 43.690 15.578 LGA D 105 D 105 8.006 0 0.064 0.107 10.599 7.262 4.583 LGA A 106 A 106 9.323 0 0.048 0.047 11.745 2.262 2.095 LGA Y 107 Y 107 8.227 0 0.066 1.408 10.998 2.500 17.659 LGA V 108 V 108 11.385 0 0.083 1.016 14.954 0.119 0.068 LGA Q 109 Q 109 15.893 0 0.022 1.029 19.022 0.000 0.000 LGA S 110 S 110 16.384 0 0.036 0.702 18.352 0.000 0.000 LGA C 111 C 111 15.178 0 0.045 0.726 18.574 0.000 0.000 LGA R 112 R 112 19.909 0 0.091 0.969 23.237 0.000 0.000 LGA A 113 A 113 23.005 0 0.065 0.079 25.279 0.000 0.000 LGA I 114 I 114 22.761 0 0.029 0.102 25.100 0.000 0.000 LGA W 115 W 115 23.828 0 0.133 0.147 25.650 0.000 0.000 LGA N 116 N 116 26.624 0 0.529 1.227 30.389 0.000 0.000 LGA D 117 D 117 33.760 0 0.942 1.153 34.866 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 89 356 356 100.00 739 739 100.00 89 SUMMARY(RMSD_GDC): 12.481 12.356 12.951 21.386 17.802 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 89 89 4.0 26 2.48 28.652 25.725 1.007 LGA_LOCAL RMSD: 2.482 Number of atoms: 26 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 15.206 Number of assigned atoms: 89 Std_ASGN_ATOMS RMSD: 12.481 Standard rmsd on all 89 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.799496 * X + 0.044847 * Y + -0.598994 * Z + 25.286043 Y_new = -0.442245 * X + -0.718768 * Y + 0.536463 * Z + 5.704457 Z_new = -0.406479 * X + 0.693802 * Y + 0.594486 * Z + 23.916561 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.636331 0.418597 0.862338 [DEG: -151.0507 23.9839 49.4083 ] ZXZ: -2.301178 0.934170 -0.529967 [DEG: -131.8478 53.5240 -30.3649 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0608TS065_1-D1 REMARK 2: T0608-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0608TS065_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 89 89 4.0 26 2.48 25.725 12.48 REMARK ---------------------------------------------------------- MOLECULE T0608TS065_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0608 REMARK MODEL 1 REMARK PARENT 1qwyA 2gu1A 2hsiA ATOM 229 N VAL 29 23.379 26.994 24.490 1.00130.35 N ATOM 230 CA VAL 29 23.924 27.747 25.587 1.00130.35 C ATOM 231 C VAL 29 25.065 26.988 26.172 1.00130.35 C ATOM 232 O VAL 29 26.111 27.558 26.487 1.00130.35 O ATOM 233 CB VAL 29 22.913 28.026 26.664 1.00130.35 C ATOM 234 CG1 VAL 29 21.826 28.934 26.067 1.00130.35 C ATOM 235 CG2 VAL 29 22.359 26.699 27.197 1.00130.35 C ATOM 236 N SER 30 24.893 25.666 26.331 1.00100.00 N ATOM 237 CA SER 30 25.949 24.859 26.863 1.00100.00 C ATOM 238 C SER 30 27.086 24.913 25.896 1.00100.00 C ATOM 239 O SER 30 28.248 25.040 26.279 1.00100.00 O ATOM 240 CB SER 30 25.545 23.384 27.018 1.00100.00 C ATOM 241 OG SER 30 25.316 22.796 25.747 1.00100.00 O ATOM 242 N GLY 31 26.759 24.835 24.595 1.00 60.78 N ATOM 243 CA GLY 31 27.759 24.820 23.560 1.00 60.78 C ATOM 244 C GLY 31 28.488 26.125 23.530 1.00 60.78 C ATOM 245 O GLY 31 29.665 26.187 23.169 1.00 60.78 O ATOM 246 N PHE 32 27.762 27.215 23.828 1.00113.12 N ATOM 247 CA PHE 32 28.303 28.540 23.773 1.00113.12 C ATOM 248 C PHE 32 29.328 28.752 24.840 1.00113.12 C ATOM 249 O PHE 32 30.422 29.254 24.581 1.00113.12 O ATOM 250 CB PHE 32 27.198 29.611 23.835 1.00113.12 C ATOM 251 CG PHE 32 27.800 30.971 23.767 1.00113.12 C ATOM 252 CD1 PHE 32 28.763 31.276 22.834 1.00113.12 C ATOM 253 CD2 PHE 32 27.342 31.970 24.593 1.00113.12 C ATOM 254 CE1 PHE 32 29.297 32.542 22.769 1.00113.12 C ATOM 255 CE2 PHE 32 27.868 33.237 24.531 1.00113.12 C ATOM 256 CZ PHE 32 28.854 33.525 23.619 1.00113.12 C ATOM 257 N GLN 33 29.012 28.329 26.069 1.00143.47 N ATOM 258 CA GLN 33 29.879 28.476 27.197 1.00143.47 C ATOM 259 C GLN 33 31.128 27.703 26.919 1.00143.47 C ATOM 260 O GLN 33 32.221 28.125 27.291 1.00143.47 O ATOM 261 CB GLN 33 29.216 27.852 28.429 1.00143.47 C ATOM 262 CG GLN 33 30.095 27.758 29.664 1.00143.47 C ATOM 263 CD GLN 33 29.390 26.780 30.593 1.00143.47 C ATOM 264 NE2 GLN 33 29.672 25.460 30.416 1.00143.47 N ATOM 265 OE1 GLN 33 28.585 27.175 31.434 1.00143.47 O ATOM 266 N ARG 34 30.975 26.520 26.297 1.00 54.10 N ATOM 267 CA ARG 34 32.058 25.635 25.967 1.00 54.10 C ATOM 268 C ARG 34 32.939 26.233 24.905 1.00 54.10 C ATOM 269 O ARG 34 34.165 26.191 25.003 1.00 54.10 O ATOM 270 CB ARG 34 31.546 24.293 25.410 1.00 54.10 C ATOM 271 CG ARG 34 30.675 23.495 26.386 1.00 54.10 C ATOM 272 CD ARG 34 29.900 22.354 25.716 1.00 54.10 C ATOM 273 NE ARG 34 29.093 21.668 26.767 1.00 54.10 N ATOM 274 CZ ARG 34 29.484 20.458 27.265 1.00 54.10 C ATOM 275 NH1 ARG 34 30.592 19.832 26.770 1.00 54.10 N ATOM 276 NH2 ARG 34 28.756 19.868 28.257 1.00 54.10 N ATOM 277 N LEU 35 32.324 26.832 23.868 1.00 60.33 N ATOM 278 CA LEU 35 33.023 27.328 22.712 1.00 60.33 C ATOM 279 C LEU 35 33.944 28.438 23.091 1.00 60.33 C ATOM 280 O LEU 35 34.994 28.628 22.481 1.00 60.33 O ATOM 281 CB LEU 35 32.077 27.854 21.617 1.00 60.33 C ATOM 282 CG LEU 35 32.809 28.395 20.373 1.00 60.33 C ATOM 283 CD1 LEU 35 33.666 27.306 19.706 1.00 60.33 C ATOM 284 CD2 LEU 35 31.825 29.047 19.389 1.00 60.33 C ATOM 285 N GLN 36 33.578 29.193 24.132 1.00136.19 N ATOM 286 CA GLN 36 34.307 30.365 24.501 1.00136.19 C ATOM 287 C GLN 36 35.729 29.987 24.790 1.00136.19 C ATOM 288 O GLN 36 36.643 30.759 24.509 1.00136.19 O ATOM 289 CB GLN 36 33.698 31.040 25.740 1.00136.19 C ATOM 290 CG GLN 36 34.052 32.517 25.871 1.00136.19 C ATOM 291 CD GLN 36 33.304 33.271 24.778 1.00136.19 C ATOM 292 NE2 GLN 36 32.189 33.950 25.161 1.00136.19 N ATOM 293 OE1 GLN 36 33.698 33.253 23.613 1.00136.19 O ATOM 294 N LYS 37 35.953 28.797 25.382 1.00154.54 N ATOM 295 CA LYS 37 37.274 28.385 25.763 1.00154.54 C ATOM 296 C LYS 37 38.155 28.168 24.564 1.00154.54 C ATOM 297 O LYS 37 39.271 28.688 24.530 1.00154.54 O ATOM 298 CB LYS 37 37.257 27.087 26.595 1.00154.54 C ATOM 299 CG LYS 37 36.253 27.132 27.752 1.00154.54 C ATOM 300 CD LYS 37 36.496 28.260 28.753 1.00154.54 C ATOM 301 CE LYS 37 37.145 27.791 30.055 1.00154.54 C ATOM 302 NZ LYS 37 36.175 27.008 30.852 1.00154.54 N ATOM 303 N PRO 38 37.730 27.447 23.556 1.00 70.85 N ATOM 304 CA PRO 38 38.602 27.225 22.438 1.00 70.85 C ATOM 305 C PRO 38 38.900 28.507 21.737 1.00 70.85 C ATOM 306 O PRO 38 39.990 28.647 21.185 1.00 70.85 O ATOM 307 CB PRO 38 37.910 26.176 21.573 1.00 70.85 C ATOM 308 CG PRO 38 37.077 25.368 22.588 1.00 70.85 C ATOM 309 CD PRO 38 36.756 26.375 23.706 1.00 70.85 C ATOM 310 N VAL 39 37.932 29.439 21.727 1.00 46.27 N ATOM 311 CA VAL 39 38.095 30.698 21.063 1.00 46.27 C ATOM 312 C VAL 39 39.134 31.526 21.756 1.00 46.27 C ATOM 313 O VAL 39 40.048 32.049 21.122 1.00 46.27 O ATOM 314 CB VAL 39 36.831 31.506 21.054 1.00 46.27 C ATOM 315 CG1 VAL 39 37.130 32.879 20.425 1.00 46.27 C ATOM 316 CG2 VAL 39 35.739 30.708 20.321 1.00 46.27 C ATOM 317 N VAL 40 39.027 31.647 23.090 1.00100.76 N ATOM 318 CA VAL 40 39.914 32.484 23.849 1.00100.76 C ATOM 319 C VAL 40 41.295 31.930 23.761 1.00100.76 C ATOM 320 O VAL 40 42.281 32.663 23.821 1.00100.76 O ATOM 321 CB VAL 40 39.541 32.584 25.303 1.00100.76 C ATOM 322 CG1 VAL 40 39.627 31.190 25.943 1.00100.76 C ATOM 323 CG2 VAL 40 40.456 33.628 25.967 1.00100.76 C ATOM 324 N SER 41 41.389 30.596 23.661 1.00 82.73 N ATOM 325 CA SER 41 42.642 29.911 23.598 1.00 82.73 C ATOM 326 C SER 41 43.333 30.209 22.304 1.00 82.73 C ATOM 327 O SER 41 44.562 30.197 22.246 1.00 82.73 O ATOM 328 CB SER 41 42.463 28.389 23.673 1.00 82.73 C ATOM 329 OG SER 41 43.727 27.754 23.600 1.00 82.73 O ATOM 330 N GLN 42 42.567 30.489 21.229 1.00 54.75 N ATOM 331 CA GLN 42 43.169 30.662 19.935 1.00 54.75 C ATOM 332 C GLN 42 43.082 32.102 19.515 1.00 54.75 C ATOM 333 O GLN 42 42.011 32.707 19.504 1.00 54.75 O ATOM 334 CB GLN 42 42.448 29.821 18.864 1.00 54.75 C ATOM 335 CG GLN 42 43.050 29.920 17.464 1.00 54.75 C ATOM 336 CD GLN 42 44.321 29.085 17.434 1.00 54.75 C ATOM 337 NE2 GLN 42 45.442 29.705 16.976 1.00 54.75 N ATOM 338 OE1 GLN 42 44.320 27.914 17.812 1.00 54.75 O ATOM 339 N PRO 43 44.210 32.668 19.173 1.00159.04 N ATOM 340 CA PRO 43 44.218 34.033 18.724 1.00159.04 C ATOM 341 C PRO 43 43.520 34.194 17.409 1.00159.04 C ATOM 342 O PRO 43 43.002 35.280 17.144 1.00159.04 O ATOM 343 CB PRO 43 45.679 34.471 18.749 1.00159.04 C ATOM 344 CG PRO 43 46.292 33.602 19.860 1.00159.04 C ATOM 345 CD PRO 43 45.447 32.316 19.851 1.00159.04 C ATOM 346 N ASP 44 43.513 33.146 16.563 1.00 33.83 N ATOM 347 CA ASP 44 42.849 33.207 15.291 1.00 33.83 C ATOM 348 C ASP 44 41.376 33.320 15.546 1.00 33.83 C ATOM 349 O ASP 44 40.667 34.072 14.877 1.00 33.83 O ATOM 350 CB ASP 44 43.086 31.946 14.439 1.00 33.83 C ATOM 351 CG ASP 44 44.552 31.915 14.018 1.00 33.83 C ATOM 352 OD1 ASP 44 45.246 32.951 14.197 1.00 33.83 O ATOM 353 OD2 ASP 44 44.996 30.851 13.510 1.00 33.83 O ATOM 354 N PHE 45 40.884 32.558 16.540 1.00112.00 N ATOM 355 CA PHE 45 39.504 32.550 16.938 1.00112.00 C ATOM 356 C PHE 45 39.165 33.882 17.520 1.00112.00 C ATOM 357 O PHE 45 38.048 34.370 17.364 1.00112.00 O ATOM 358 CB PHE 45 39.208 31.482 18.000 1.00112.00 C ATOM 359 CG PHE 45 39.147 30.178 17.288 1.00112.00 C ATOM 360 CD1 PHE 45 40.229 29.711 16.584 1.00112.00 C ATOM 361 CD2 PHE 45 38.011 29.409 17.354 1.00112.00 C ATOM 362 CE1 PHE 45 40.164 28.504 15.932 1.00112.00 C ATOM 363 CE2 PHE 45 37.940 28.200 16.705 1.00112.00 C ATOM 364 CZ PHE 45 39.020 27.746 15.989 1.00112.00 C ATOM 365 N ARG 46 40.116 34.487 18.255 1.00 97.23 N ATOM 366 CA ARG 46 39.873 35.771 18.843 1.00 97.23 C ATOM 367 C ARG 46 39.665 36.763 17.743 1.00 97.23 C ATOM 368 O ARG 46 38.809 37.640 17.839 1.00 97.23 O ATOM 369 CB ARG 46 41.048 36.305 19.677 1.00 97.23 C ATOM 370 CG ARG 46 41.335 35.509 20.947 1.00 97.23 C ATOM 371 CD ARG 46 42.373 36.190 21.840 1.00 97.23 C ATOM 372 NE ARG 46 42.703 35.253 22.946 1.00 97.23 N ATOM 373 CZ ARG 46 43.978 35.208 23.427 1.00 97.23 C ATOM 374 NH1 ARG 46 44.932 36.039 22.915 1.00 97.23 N ATOM 375 NH2 ARG 46 44.301 34.323 24.414 1.00 97.23 N ATOM 376 N ARG 47 40.461 36.648 16.663 1.00 93.40 N ATOM 377 CA ARG 47 40.389 37.567 15.564 1.00 93.40 C ATOM 378 C ARG 47 39.026 37.476 14.954 1.00 93.40 C ATOM 379 O ARG 47 38.407 38.495 14.648 1.00 93.40 O ATOM 380 CB ARG 47 41.412 37.224 14.465 1.00 93.40 C ATOM 381 CG ARG 47 42.864 37.315 14.943 1.00 93.40 C ATOM 382 CD ARG 47 43.896 36.838 13.915 1.00 93.40 C ATOM 383 NE ARG 47 43.974 37.859 12.833 1.00 93.40 N ATOM 384 CZ ARG 47 45.152 38.071 12.178 1.00 93.40 C ATOM 385 NH1 ARG 47 46.267 37.369 12.534 1.00 93.40 N ATOM 386 NH2 ARG 47 45.217 38.985 11.167 1.00 93.40 N ATOM 387 N GLN 48 38.520 36.242 14.773 1.00 52.27 N ATOM 388 CA GLN 48 37.240 36.037 14.154 1.00 52.27 C ATOM 389 C GLN 48 36.156 36.182 15.174 1.00 52.27 C ATOM 390 O GLN 48 36.372 36.029 16.376 1.00 52.27 O ATOM 391 CB GLN 48 37.071 34.637 13.535 1.00 52.27 C ATOM 392 CG GLN 48 37.982 34.383 12.333 1.00 52.27 C ATOM 393 CD GLN 48 37.718 32.975 11.824 1.00 52.27 C ATOM 394 NE2 GLN 48 38.165 32.687 10.573 1.00 52.27 N ATOM 395 OE1 GLN 48 37.133 32.148 12.521 1.00 52.27 O ATOM 396 N PRO 49 34.981 36.507 14.693 1.00 79.54 N ATOM 397 CA PRO 49 33.819 36.593 15.530 1.00 79.54 C ATOM 398 C PRO 49 33.421 35.198 15.891 1.00 79.54 C ATOM 399 O PRO 49 33.633 34.287 15.093 1.00 79.54 O ATOM 400 CB PRO 49 32.767 37.371 14.735 1.00 79.54 C ATOM 401 CG PRO 49 33.307 37.392 13.293 1.00 79.54 C ATOM 402 CD PRO 49 34.831 37.280 13.473 1.00 79.54 C ATOM 403 N VAL 50 32.805 35.015 17.070 1.00104.73 N ATOM 404 CA VAL 50 32.472 33.718 17.574 1.00104.73 C ATOM 405 C VAL 50 31.549 33.051 16.606 1.00104.73 C ATOM 406 O VAL 50 31.568 31.832 16.452 1.00104.73 O ATOM 407 CB VAL 50 31.770 33.784 18.899 1.00104.73 C ATOM 408 CG1 VAL 50 30.401 34.460 18.702 1.00104.73 C ATOM 409 CG2 VAL 50 31.682 32.362 19.473 1.00104.73 C ATOM 410 N SER 51 30.685 33.846 15.953 1.00 47.20 N ATOM 411 CA SER 51 29.732 33.332 15.013 1.00 47.20 C ATOM 412 C SER 51 30.438 32.742 13.827 1.00 47.20 C ATOM 413 O SER 51 29.972 31.752 13.266 1.00 47.20 O ATOM 414 CB SER 51 28.780 34.425 14.500 1.00 47.20 C ATOM 415 OG SER 51 29.510 35.419 13.795 1.00 47.20 O ATOM 416 N GLU 52 31.554 33.359 13.384 1.00119.29 N ATOM 417 CA GLU 52 32.288 32.862 12.247 1.00119.29 C ATOM 418 C GLU 52 32.929 31.545 12.551 1.00119.29 C ATOM 419 O GLU 52 32.785 30.589 11.792 1.00119.29 O ATOM 420 CB GLU 52 33.448 33.776 11.818 1.00119.29 C ATOM 421 CG GLU 52 33.020 34.950 10.950 1.00119.29 C ATOM 422 CD GLU 52 32.668 34.377 9.585 1.00119.29 C ATOM 423 OE1 GLU 52 33.139 33.251 9.274 1.00119.29 O ATOM 424 OE2 GLU 52 31.919 35.059 8.837 1.00119.29 O ATOM 425 N THR 53 33.648 31.460 13.688 1.00128.69 N ATOM 426 CA THR 53 34.367 30.262 14.016 1.00128.69 C ATOM 427 C THR 53 33.379 29.159 14.221 1.00128.69 C ATOM 428 O THR 53 33.633 28.009 13.866 1.00128.69 O ATOM 429 CB THR 53 35.218 30.380 15.252 1.00128.69 C ATOM 430 CG2 THR 53 36.283 31.463 15.036 1.00128.69 C ATOM 431 OG1 THR 53 34.423 30.706 16.378 1.00128.69 O ATOM 432 N MET 54 32.225 29.483 14.821 1.00 47.68 N ATOM 433 CA MET 54 31.216 28.492 15.057 1.00 47.68 C ATOM 434 C MET 54 30.729 27.965 13.739 1.00 47.68 C ATOM 435 O MET 54 30.595 26.757 13.553 1.00 47.68 O ATOM 436 CB MET 54 29.999 29.084 15.789 1.00 47.68 C ATOM 437 CG MET 54 28.884 28.079 16.077 1.00 47.68 C ATOM 438 SD MET 54 27.404 28.827 16.815 1.00 47.68 S ATOM 439 CE MET 54 26.967 29.722 15.296 1.00 47.68 C ATOM 440 N GLN 55 30.489 28.871 12.772 1.00 60.07 N ATOM 441 CA GLN 55 29.945 28.497 11.496 1.00 60.07 C ATOM 442 C GLN 55 30.889 27.585 10.789 1.00 60.07 C ATOM 443 O GLN 55 30.466 26.614 10.166 1.00 60.07 O ATOM 444 CB GLN 55 29.754 29.693 10.559 1.00 60.07 C ATOM 445 CG GLN 55 29.179 29.289 9.204 1.00 60.07 C ATOM 446 CD GLN 55 29.438 30.446 8.260 1.00 60.07 C ATOM 447 NE2 GLN 55 28.733 30.466 7.099 1.00 60.07 N ATOM 448 OE1 GLN 55 30.265 31.305 8.554 1.00 60.07 O ATOM 449 N VAL 56 32.199 27.879 10.845 1.00108.83 N ATOM 450 CA VAL 56 33.114 27.043 10.129 1.00108.83 C ATOM 451 C VAL 56 33.095 25.664 10.712 1.00108.83 C ATOM 452 O VAL 56 33.123 24.678 9.979 1.00108.83 O ATOM 453 CB VAL 56 34.529 27.557 10.098 1.00108.83 C ATOM 454 CG1 VAL 56 34.557 28.846 9.259 1.00108.83 C ATOM 455 CG2 VAL 56 35.036 27.765 11.531 1.00108.83 C ATOM 456 N TYR 57 33.050 25.560 12.053 1.00 64.99 N ATOM 457 CA TYR 57 33.109 24.286 12.715 1.00 64.99 C ATOM 458 C TYR 57 31.869 23.492 12.400 1.00 64.99 C ATOM 459 O TYR 57 31.943 22.342 11.968 1.00 64.99 O ATOM 460 CB TYR 57 33.179 24.482 14.239 1.00 64.99 C ATOM 461 CG TYR 57 33.693 23.240 14.871 1.00 64.99 C ATOM 462 CD1 TYR 57 35.053 23.038 14.931 1.00 64.99 C ATOM 463 CD2 TYR 57 32.848 22.298 15.406 1.00 64.99 C ATOM 464 CE1 TYR 57 35.571 21.907 15.510 1.00 64.99 C ATOM 465 CE2 TYR 57 33.362 21.161 15.988 1.00 64.99 C ATOM 466 CZ TYR 57 34.722 20.965 16.038 1.00 64.99 C ATOM 467 OH TYR 57 35.255 19.801 16.631 1.00 64.99 O ATOM 468 N LEU 58 30.684 24.104 12.595 1.00 66.53 N ATOM 469 CA LEU 58 29.417 23.455 12.377 1.00 66.53 C ATOM 470 C LEU 58 29.193 23.209 10.918 1.00 66.53 C ATOM 471 O LEU 58 28.564 22.222 10.539 1.00 66.53 O ATOM 472 CB LEU 58 28.231 24.266 12.924 1.00 66.53 C ATOM 473 CG LEU 58 28.244 24.374 14.462 1.00 66.53 C ATOM 474 CD1 LEU 58 27.050 25.189 14.976 1.00 66.53 C ATOM 475 CD2 LEU 58 28.335 22.987 15.127 1.00 66.53 C ATOM 476 N LYS 59 29.656 24.130 10.055 1.00 98.95 N ATOM 477 CA LYS 59 29.485 23.946 8.645 1.00 98.95 C ATOM 478 C LYS 59 28.057 24.205 8.286 1.00 98.95 C ATOM 479 O LYS 59 27.452 25.187 8.713 1.00 98.95 O ATOM 480 CB LYS 59 29.879 22.549 8.136 1.00 98.95 C ATOM 481 CG LYS 59 31.390 22.308 8.125 1.00 98.95 C ATOM 482 CD LYS 59 31.771 20.848 7.867 1.00 98.95 C ATOM 483 CE LYS 59 33.281 20.606 7.810 1.00 98.95 C ATOM 484 NZ LYS 59 33.863 20.683 9.169 1.00 98.95 N ATOM 485 N GLN 60 27.486 23.304 7.470 1.00 90.37 N ATOM 486 CA GLN 60 26.151 23.433 6.964 1.00 90.37 C ATOM 487 C GLN 60 25.200 23.420 8.120 1.00 90.37 C ATOM 488 O GLN 60 24.108 23.979 8.044 1.00 90.37 O ATOM 489 CB GLN 60 25.771 22.320 5.977 1.00 90.37 C ATOM 490 CG GLN 60 24.487 22.608 5.195 1.00 90.37 C ATOM 491 CD GLN 60 24.369 21.558 4.097 1.00 90.37 C ATOM 492 NE2 GLN 60 23.838 21.966 2.912 1.00 90.37 N ATOM 493 OE1 GLN 60 24.749 20.405 4.287 1.00 90.37 O ATOM 494 N ALA 61 25.590 22.766 9.229 1.00 35.48 N ATOM 495 CA ALA 61 24.734 22.680 10.377 1.00 35.48 C ATOM 496 C ALA 61 24.407 24.067 10.851 1.00 35.48 C ATOM 497 O ALA 61 23.303 24.311 11.337 1.00 35.48 O ATOM 498 CB ALA 61 25.384 21.935 11.554 1.00 35.48 C ATOM 499 N ALA 62 25.369 25.007 10.760 1.00 35.66 N ATOM 500 CA ALA 62 25.142 26.357 11.206 1.00 35.66 C ATOM 501 C ALA 62 24.329 27.110 10.193 1.00 35.66 C ATOM 502 O ALA 62 24.381 26.826 8.999 1.00 35.66 O ATOM 503 CB ALA 62 26.441 27.156 11.420 1.00 35.66 C ATOM 504 N ASP 63 23.549 28.106 10.668 1.00 58.11 N ATOM 505 CA ASP 63 22.721 28.933 9.830 1.00 58.11 C ATOM 506 C ASP 63 23.336 30.301 9.826 1.00 58.11 C ATOM 507 O ASP 63 23.282 31.015 10.827 1.00 58.11 O ATOM 508 CB ASP 63 21.300 29.061 10.411 1.00 58.11 C ATOM 509 CG ASP 63 20.421 29.886 9.489 1.00 58.11 C ATOM 510 OD1 ASP 63 20.945 30.422 8.476 1.00 58.11 O ATOM 511 OD2 ASP 63 19.203 29.989 9.797 1.00 58.11 O ATOM 512 N PRO 64 23.910 30.706 8.726 1.00 64.99 N ATOM 513 CA PRO 64 24.557 31.987 8.665 1.00 64.99 C ATOM 514 C PRO 64 23.620 33.127 8.905 1.00 64.99 C ATOM 515 O PRO 64 24.060 34.154 9.418 1.00 64.99 O ATOM 516 CB PRO 64 25.253 32.029 7.307 1.00 64.99 C ATOM 517 CG PRO 64 25.554 30.547 7.011 1.00 64.99 C ATOM 518 CD PRO 64 24.455 29.770 7.757 1.00 64.99 C ATOM 519 N GLY 65 22.339 32.990 8.520 1.00 26.59 N ATOM 520 CA GLY 65 21.419 34.074 8.712 1.00 26.59 C ATOM 521 C GLY 65 21.213 34.296 10.178 1.00 26.59 C ATOM 522 O GLY 65 21.210 35.429 10.657 1.00 26.59 O ATOM 523 N ARG 66 21.014 33.190 10.914 1.00129.19 N ATOM 524 CA ARG 66 20.772 33.153 12.329 1.00129.19 C ATOM 525 C ARG 66 22.022 33.573 13.034 1.00129.19 C ATOM 526 O ARG 66 21.973 34.175 14.105 1.00129.19 O ATOM 527 CB ARG 66 20.453 31.719 12.776 1.00129.19 C ATOM 528 CG ARG 66 20.060 31.546 14.239 1.00129.19 C ATOM 529 CD ARG 66 20.099 30.077 14.675 1.00129.19 C ATOM 530 NE ARG 66 19.322 29.291 13.674 1.00129.19 N ATOM 531 CZ ARG 66 19.444 27.931 13.627 1.00129.19 C ATOM 532 NH1 ARG 66 20.223 27.282 14.541 1.00129.19 N ATOM 533 NH2 ARG 66 18.801 27.223 12.652 1.00129.19 N ATOM 534 N ASP 67 23.186 33.216 12.458 1.00 42.31 N ATOM 535 CA ASP 67 24.442 33.518 13.079 1.00 42.31 C ATOM 536 C ASP 67 24.596 34.997 13.179 1.00 42.31 C ATOM 537 O ASP 67 24.920 35.526 14.240 1.00 42.31 O ATOM 538 CB ASP 67 25.646 32.996 12.275 1.00 42.31 C ATOM 539 CG ASP 67 25.664 31.473 12.338 1.00 42.31 C ATOM 540 OD1 ASP 67 24.896 30.897 13.152 1.00 42.31 O ATOM 541 OD2 ASP 67 26.455 30.867 11.567 1.00 42.31 O ATOM 542 N VAL 68 24.386 35.702 12.055 1.00 43.39 N ATOM 543 CA VAL 68 24.487 37.127 12.039 1.00 43.39 C ATOM 544 C VAL 68 23.342 37.715 12.805 1.00 43.39 C ATOM 545 O VAL 68 23.515 38.657 13.576 1.00 43.39 O ATOM 546 CB VAL 68 24.440 37.682 10.648 1.00 43.39 C ATOM 547 CG1 VAL 68 24.516 39.214 10.729 1.00 43.39 C ATOM 548 CG2 VAL 68 25.578 37.047 9.830 1.00 43.39 C ATOM 549 N GLY 69 22.118 37.193 12.588 1.00 68.54 N ATOM 550 CA GLY 69 20.995 37.800 13.236 1.00 68.54 C ATOM 551 C GLY 69 21.030 37.633 14.729 1.00 68.54 C ATOM 552 O GLY 69 20.975 38.617 15.466 1.00 68.54 O ATOM 553 N LEU 70 21.011 36.378 15.222 1.00157.71 N ATOM 554 CA LEU 70 21.023 36.161 16.646 1.00157.71 C ATOM 555 C LEU 70 22.373 36.029 17.294 1.00157.71 C ATOM 556 O LEU 70 22.707 36.722 18.253 1.00157.71 O ATOM 557 CB LEU 70 20.200 34.941 17.067 1.00157.71 C ATOM 558 CG LEU 70 18.707 35.095 16.734 1.00157.71 C ATOM 559 CD1 LEU 70 18.430 34.998 15.226 1.00157.71 C ATOM 560 CD2 LEU 70 17.866 34.125 17.561 1.00157.71 C ATOM 561 N TYR 71 23.200 35.138 16.723 1.00173.65 N ATOM 562 CA TYR 71 24.426 34.652 17.297 1.00173.65 C ATOM 563 C TYR 71 25.427 35.756 17.396 1.00173.65 C ATOM 564 O TYR 71 26.315 35.726 18.246 1.00173.65 O ATOM 565 CB TYR 71 25.031 33.494 16.478 1.00173.65 C ATOM 566 CG TYR 71 26.011 32.772 17.340 1.00173.65 C ATOM 567 CD1 TYR 71 27.333 33.140 17.403 1.00173.65 C ATOM 568 CD2 TYR 71 25.588 31.710 18.101 1.00173.65 C ATOM 569 CE1 TYR 71 28.210 32.454 18.211 1.00173.65 C ATOM 570 CE2 TYR 71 26.462 31.022 18.909 1.00173.65 C ATOM 571 CZ TYR 71 27.777 31.394 18.967 1.00173.65 C ATOM 572 OH TYR 71 28.677 30.690 19.793 1.00173.65 O ATOM 573 N TRP 72 25.317 36.762 16.515 1.00 79.00 N ATOM 574 CA TRP 72 26.268 37.830 16.444 1.00 79.00 C ATOM 575 C TRP 72 26.381 38.456 17.801 1.00 79.00 C ATOM 576 O TRP 72 27.440 38.963 18.166 1.00 79.00 O ATOM 577 CB TRP 72 25.868 38.933 15.452 1.00 79.00 C ATOM 578 CG TRP 72 26.891 40.036 15.334 1.00 79.00 C ATOM 579 CD1 TRP 72 26.963 41.222 16.003 1.00 79.00 C ATOM 580 CD2 TRP 72 28.022 39.999 14.450 1.00 79.00 C ATOM 581 CE2 TRP 72 28.728 41.186 14.633 1.00 79.00 C ATOM 582 CE3 TRP 72 28.440 39.051 13.559 1.00 79.00 C ATOM 583 NE1 TRP 72 28.067 41.929 15.589 1.00 79.00 N ATOM 584 CZ2 TRP 72 29.867 41.447 13.924 1.00 79.00 C ATOM 585 CZ3 TRP 72 29.586 39.316 12.845 1.00 79.00 C ATOM 586 CH2 TRP 72 30.285 40.492 13.025 1.00 79.00 C ATOM 587 N MET 73 25.297 38.421 18.594 1.00 64.51 N ATOM 588 CA MET 73 25.286 39.016 19.900 1.00 64.51 C ATOM 589 C MET 73 26.384 38.392 20.711 1.00 64.51 C ATOM 590 O MET 73 27.023 39.056 21.524 1.00 64.51 O ATOM 591 CB MET 73 23.956 38.781 20.640 1.00 64.51 C ATOM 592 CG MET 73 23.884 39.437 22.021 1.00 64.51 C ATOM 593 SD MET 73 22.285 39.248 22.869 1.00 64.51 S ATOM 594 CE MET 73 22.473 37.478 23.232 1.00 64.51 C ATOM 595 N ALA 74 26.644 37.093 20.492 1.00 60.90 N ATOM 596 CA ALA 74 27.625 36.336 21.221 1.00 60.90 C ATOM 597 C ALA 74 28.990 36.926 21.024 1.00 60.90 C ATOM 598 O ALA 74 29.857 36.817 21.889 1.00 60.90 O ATOM 599 CB ALA 74 27.688 34.863 20.783 1.00 60.90 C ATOM 600 N THR 75 29.218 37.561 19.863 1.00129.51 N ATOM 601 CA THR 75 30.495 38.089 19.476 1.00129.51 C ATOM 602 C THR 75 30.964 39.051 20.527 1.00129.51 C ATOM 603 O THR 75 32.158 39.162 20.795 1.00129.51 O ATOM 604 CB THR 75 30.363 38.844 18.187 1.00129.51 C ATOM 605 CG2 THR 75 31.751 39.276 17.716 1.00129.51 C ATOM 606 OG1 THR 75 29.774 38.011 17.202 1.00129.51 O ATOM 607 N ASP 76 30.025 39.812 21.104 1.00 85.42 N ATOM 608 CA ASP 76 30.262 40.798 22.119 1.00 85.42 C ATOM 609 C ASP 76 30.548 40.184 23.461 1.00 85.42 C ATOM 610 O ASP 76 31.042 40.884 24.343 1.00 85.42 O ATOM 611 CB ASP 76 29.068 41.749 22.286 1.00 85.42 C ATOM 612 CG ASP 76 28.967 42.554 20.998 1.00 85.42 C ATOM 613 OD1 ASP 76 30.036 42.983 20.486 1.00 85.42 O ATOM 614 OD2 ASP 76 27.824 42.733 20.498 1.00 85.42 O ATOM 615 N PHE 77 30.201 38.898 23.695 1.00145.03 N ATOM 616 CA PHE 77 30.334 38.385 25.037 1.00145.03 C ATOM 617 C PHE 77 31.712 37.863 25.321 1.00145.03 C ATOM 618 O PHE 77 32.181 36.909 24.703 1.00145.03 O ATOM 619 CB PHE 77 29.367 37.240 25.376 1.00145.03 C ATOM 620 CG PHE 77 27.977 37.738 25.192 1.00145.03 C ATOM 621 CD1 PHE 77 27.546 38.876 25.837 1.00145.03 C ATOM 622 CD2 PHE 77 27.093 37.036 24.407 1.00145.03 C ATOM 623 CE1 PHE 77 26.259 39.325 25.670 1.00145.03 C ATOM 624 CE2 PHE 77 25.805 37.479 24.240 1.00145.03 C ATOM 625 CZ PHE 77 25.386 38.627 24.869 1.00145.03 C ATOM 626 N GLU 78 32.404 38.538 26.264 1.00 92.71 N ATOM 627 CA GLU 78 33.711 38.197 26.753 1.00 92.71 C ATOM 628 C GLU 78 33.675 37.067 27.744 1.00 92.71 C ATOM 629 O GLU 78 34.540 36.193 27.727 1.00 92.71 O ATOM 630 CB GLU 78 34.384 39.393 27.444 1.00 92.71 C ATOM 631 CG GLU 78 34.669 40.555 26.489 1.00 92.71 C ATOM 632 CD GLU 78 35.864 40.169 25.630 1.00 92.71 C ATOM 633 OE1 GLU 78 36.855 39.646 26.205 1.00 92.71 O ATOM 634 OE2 GLU 78 35.802 40.384 24.389 1.00 92.71 O ATOM 635 N ASN 79 32.669 37.047 28.642 1.00 57.84 N ATOM 636 CA ASN 79 32.673 36.102 29.727 1.00 57.84 C ATOM 637 C ASN 79 32.568 34.702 29.202 1.00 57.84 C ATOM 638 O ASN 79 31.713 34.387 28.376 1.00 57.84 O ATOM 639 CB ASN 79 31.546 36.352 30.745 1.00 57.84 C ATOM 640 CG ASN 79 31.901 35.621 32.031 1.00 57.84 C ATOM 641 ND2 ASN 79 32.249 36.395 33.092 1.00 57.84 N ATOM 642 OD1 ASN 79 31.877 34.393 32.090 1.00 57.84 O ATOM 643 N ARG 80 33.474 33.827 29.691 1.00 87.78 N ATOM 644 CA ARG 80 33.578 32.452 29.286 1.00 87.78 C ATOM 645 C ARG 80 32.381 31.689 29.747 1.00 87.78 C ATOM 646 O ARG 80 31.915 30.773 29.070 1.00 87.78 O ATOM 647 CB ARG 80 34.828 31.762 29.859 1.00 87.78 C ATOM 648 CG ARG 80 36.131 32.403 29.376 1.00 87.78 C ATOM 649 CD ARG 80 37.387 31.663 29.835 1.00 87.78 C ATOM 650 NE ARG 80 37.413 31.703 31.323 1.00 87.78 N ATOM 651 CZ ARG 80 38.367 31.002 32.001 1.00 87.78 C ATOM 652 NH1 ARG 80 39.305 30.287 31.314 1.00 87.78 N ATOM 653 NH2 ARG 80 38.383 31.019 33.366 1.00 87.78 N ATOM 654 N ARG 81 31.856 32.044 30.931 1.00215.80 N ATOM 655 CA ARG 81 30.757 31.305 31.468 1.00215.80 C ATOM 656 C ARG 81 29.537 32.163 31.383 1.00215.80 C ATOM 657 O ARG 81 29.619 33.387 31.476 1.00215.80 O ATOM 658 CB ARG 81 30.965 30.949 32.946 1.00215.80 C ATOM 659 CG ARG 81 30.158 29.736 33.372 1.00215.80 C ATOM 660 CD ARG 81 30.644 28.487 32.644 1.00215.80 C ATOM 661 NE ARG 81 31.912 28.042 33.275 1.00215.80 N ATOM 662 CZ ARG 81 31.880 27.109 34.267 1.00215.80 C ATOM 663 NH1 ARG 81 30.700 26.513 34.610 1.00215.80 N ATOM 664 NH2 ARG 81 33.032 26.774 34.916 1.00215.80 N ATOM 665 N PHE 82 28.364 31.524 31.190 1.00173.26 N ATOM 666 CA PHE 82 27.151 32.279 31.059 1.00173.26 C ATOM 667 C PHE 82 26.152 31.758 32.035 1.00173.26 C ATOM 668 O PHE 82 26.153 30.588 32.417 1.00173.26 O ATOM 669 CB PHE 82 26.533 32.205 29.648 1.00173.26 C ATOM 670 CG PHE 82 27.519 32.818 28.707 1.00173.26 C ATOM 671 CD1 PHE 82 27.525 34.178 28.487 1.00173.26 C ATOM 672 CD2 PHE 82 28.447 32.040 28.052 1.00173.26 C ATOM 673 CE1 PHE 82 28.434 34.749 27.626 1.00173.26 C ATOM 674 CE2 PHE 82 29.359 32.605 27.189 1.00173.26 C ATOM 675 CZ PHE 82 29.353 33.963 26.975 1.00173.26 C ATOM 676 N PRO 83 25.320 32.667 32.457 1.00 90.16 N ATOM 677 CA PRO 83 24.242 32.401 33.364 1.00 90.16 C ATOM 678 C PRO 83 23.182 31.808 32.527 1.00 90.16 C ATOM 679 O PRO 83 23.365 31.725 31.313 1.00 90.16 O ATOM 680 CB PRO 83 23.836 33.755 33.945 1.00 90.16 C ATOM 681 CG PRO 83 24.387 34.781 32.941 1.00 90.16 C ATOM 682 CD PRO 83 25.627 34.084 32.363 1.00 90.16 C ATOM 683 N GLY 84 22.072 31.385 33.142 1.00 59.11 N ATOM 684 CA GLY 84 21.082 30.788 32.326 1.00 59.11 C ATOM 685 C GLY 84 20.641 31.796 31.304 1.00 59.11 C ATOM 686 O GLY 84 20.586 31.532 30.104 1.00 59.11 O ATOM 687 N LYS 85 20.365 33.023 31.743 1.00196.54 N ATOM 688 CA LYS 85 19.900 34.002 30.809 1.00196.54 C ATOM 689 C LYS 85 20.894 35.115 30.859 1.00196.54 C ATOM 690 O LYS 85 21.285 35.545 31.941 1.00196.54 O ATOM 691 CB LYS 85 18.577 34.635 31.283 1.00196.54 C ATOM 692 CG LYS 85 17.713 35.357 30.241 1.00196.54 C ATOM 693 CD LYS 85 16.778 34.427 29.462 1.00196.54 C ATOM 694 CE LYS 85 17.300 34.065 28.078 1.00196.54 C ATOM 695 NZ LYS 85 18.765 34.060 28.133 1.00196.54 N ATOM 696 N VAL 86 21.325 35.626 29.691 1.00117.56 N ATOM 697 CA VAL 86 22.247 36.723 29.714 1.00117.56 C ATOM 698 C VAL 86 21.472 37.925 30.148 1.00117.56 C ATOM 699 O VAL 86 20.275 38.025 29.886 1.00117.56 O ATOM 700 CB VAL 86 22.854 37.007 28.369 1.00117.56 C ATOM 701 CG1 VAL 86 21.727 37.370 27.387 1.00117.56 C ATOM 702 CG2 VAL 86 23.916 38.108 28.530 1.00117.56 C ATOM 703 N SER 87 22.141 38.869 30.839 1.00 42.67 N ATOM 704 CA SER 87 21.473 40.033 31.350 1.00 42.67 C ATOM 705 C SER 87 21.051 40.890 30.200 1.00 42.67 C ATOM 706 O SER 87 21.412 40.653 29.049 1.00 42.67 O ATOM 707 CB SER 87 22.356 40.883 32.282 1.00 42.67 C ATOM 708 OG SER 87 23.486 41.367 31.571 1.00 42.67 O ATOM 709 N PRO 88 20.263 41.884 30.507 1.00 61.81 N ATOM 710 CA PRO 88 19.746 42.768 29.500 1.00 61.81 C ATOM 711 C PRO 88 20.839 43.494 28.784 1.00 61.81 C ATOM 712 O PRO 88 20.646 43.868 27.628 1.00 61.81 O ATOM 713 CB PRO 88 18.754 43.673 30.224 1.00 61.81 C ATOM 714 CG PRO 88 18.244 42.796 31.383 1.00 61.81 C ATOM 715 CD PRO 88 19.412 41.838 31.683 1.00 61.81 C ATOM 716 N SER 89 21.989 43.705 29.446 1.00 25.61 N ATOM 717 CA SER 89 23.073 44.410 28.832 1.00 25.61 C ATOM 718 C SER 89 23.560 43.588 27.684 1.00 25.61 C ATOM 719 O SER 89 24.049 44.119 26.689 1.00 25.61 O ATOM 720 CB SER 89 24.250 44.630 29.799 1.00 25.61 C ATOM 721 OG SER 89 24.780 43.380 30.215 1.00 25.61 O ATOM 722 N GLY 90 23.423 42.253 27.794 1.00 30.91 N ATOM 723 CA GLY 90 23.871 41.360 26.765 1.00 30.91 C ATOM 724 C GLY 90 23.096 41.628 25.513 1.00 30.91 C ATOM 725 O GLY 90 23.627 41.512 24.411 1.00 30.91 O ATOM 726 N PHE 91 21.792 41.918 25.664 1.00142.83 N ATOM 727 CA PHE 91 20.920 42.216 24.562 1.00142.83 C ATOM 728 C PHE 91 21.235 43.573 23.999 1.00142.83 C ATOM 729 O PHE 91 21.097 43.802 22.797 1.00142.83 O ATOM 730 CB PHE 91 19.432 42.162 24.948 1.00142.83 C ATOM 731 CG PHE 91 19.131 40.736 25.272 1.00142.83 C ATOM 732 CD1 PHE 91 18.789 39.852 24.275 1.00142.83 C ATOM 733 CD2 PHE 91 19.206 40.273 26.566 1.00142.83 C ATOM 734 CE1 PHE 91 18.515 38.534 24.561 1.00142.83 C ATOM 735 CE2 PHE 91 18.932 38.956 26.858 1.00142.83 C ATOM 736 CZ PHE 91 18.586 38.082 25.857 1.00142.83 C ATOM 737 N GLN 92 21.631 44.526 24.864 1.00 48.11 N ATOM 738 CA GLN 92 21.940 45.859 24.427 1.00 48.11 C ATOM 739 C GLN 92 23.128 45.804 23.521 1.00 48.11 C ATOM 740 O GLN 92 23.248 46.607 22.596 1.00 48.11 O ATOM 741 CB GLN 92 22.239 46.844 25.571 1.00 48.11 C ATOM 742 CG GLN 92 20.989 47.214 26.374 1.00 48.11 C ATOM 743 CD GLN 92 21.341 48.374 27.294 1.00 48.11 C ATOM 744 NE2 GLN 92 20.750 49.566 27.008 1.00 48.11 N ATOM 745 OE1 GLN 92 22.120 48.232 28.234 1.00 48.11 O ATOM 746 N LYS 93 24.044 44.853 23.773 1.00112.32 N ATOM 747 CA LYS 93 25.219 44.710 22.966 1.00112.32 C ATOM 748 C LYS 93 24.763 44.465 21.560 1.00112.32 C ATOM 749 O LYS 93 25.320 45.016 20.612 1.00112.32 O ATOM 750 CB LYS 93 26.046 43.470 23.358 1.00112.32 C ATOM 751 CG LYS 93 26.623 43.482 24.777 1.00112.32 C ATOM 752 CD LYS 93 27.684 44.554 25.017 1.00112.32 C ATOM 753 CE LYS 93 28.246 44.544 26.440 1.00112.32 C ATOM 754 NZ LYS 93 29.139 43.376 26.629 1.00112.32 N ATOM 755 N LEU 94 23.737 43.610 21.395 1.00 49.16 N ATOM 756 CA LEU 94 23.206 43.282 20.102 1.00 49.16 C ATOM 757 C LEU 94 22.554 44.495 19.514 1.00 49.16 C ATOM 758 O LEU 94 22.627 44.728 18.309 1.00 49.16 O ATOM 759 CB LEU 94 22.165 42.149 20.148 1.00 49.16 C ATOM 760 CG LEU 94 21.615 41.752 18.764 1.00 49.16 C ATOM 761 CD1 LEU 94 22.728 41.202 17.855 1.00 49.16 C ATOM 762 CD2 LEU 94 20.436 40.775 18.900 1.00 49.16 C ATOM 763 N TYR 95 21.906 45.316 20.360 1.00 66.10 N ATOM 764 CA TYR 95 21.192 46.463 19.876 1.00 66.10 C ATOM 765 C TYR 95 22.140 47.373 19.166 1.00 66.10 C ATOM 766 O TYR 95 21.817 47.921 18.114 1.00 66.10 O ATOM 767 CB TYR 95 20.506 47.267 20.991 1.00 66.10 C ATOM 768 CG TYR 95 19.824 48.416 20.332 1.00 66.10 C ATOM 769 CD1 TYR 95 18.769 48.205 19.478 1.00 66.10 C ATOM 770 CD2 TYR 95 20.225 49.707 20.586 1.00 66.10 C ATOM 771 CE1 TYR 95 18.131 49.262 18.871 1.00 66.10 C ATOM 772 CE2 TYR 95 19.592 50.768 19.984 1.00 66.10 C ATOM 773 CZ TYR 95 18.546 50.546 19.124 1.00 66.10 C ATOM 774 OH TYR 95 17.894 51.634 18.505 1.00 66.10 O ATOM 775 N ARG 96 23.351 47.544 19.721 1.00 96.25 N ATOM 776 CA ARG 96 24.333 48.409 19.137 1.00 96.25 C ATOM 777 C ARG 96 24.647 47.886 17.770 1.00 96.25 C ATOM 778 O ARG 96 24.920 48.644 16.841 1.00 96.25 O ATOM 779 CB ARG 96 25.616 48.442 19.987 1.00 96.25 C ATOM 780 CG ARG 96 26.812 49.153 19.358 1.00 96.25 C ATOM 781 CD ARG 96 27.897 49.480 20.388 1.00 96.25 C ATOM 782 NE ARG 96 29.167 49.751 19.659 1.00 96.25 N ATOM 783 CZ ARG 96 30.082 48.746 19.534 1.00 96.25 C ATOM 784 NH1 ARG 96 29.830 47.527 20.097 1.00 96.25 N ATOM 785 NH2 ARG 96 31.247 48.955 18.856 1.00 96.25 N ATOM 786 N GLN 97 24.641 46.552 17.641 1.00 84.55 N ATOM 787 CA GLN 97 24.916 45.832 16.434 1.00 84.55 C ATOM 788 C GLN 97 23.801 45.939 15.433 1.00 84.55 C ATOM 789 O GLN 97 24.022 45.645 14.260 1.00 84.55 O ATOM 790 CB GLN 97 25.212 44.345 16.685 1.00 84.55 C ATOM 791 CG GLN 97 26.445 44.145 17.570 1.00 84.55 C ATOM 792 CD GLN 97 27.604 44.917 16.950 1.00 84.55 C ATOM 793 NE2 GLN 97 28.272 45.765 17.776 1.00 84.55 N ATOM 794 OE1 GLN 97 27.904 44.780 15.764 1.00 84.55 O ATOM 795 N TRP 98 22.555 46.252 15.856 1.00 83.70 N ATOM 796 CA TRP 98 21.480 46.237 14.896 1.00 83.70 C ATOM 797 C TRP 98 20.705 47.525 14.944 1.00 83.70 C ATOM 798 O TRP 98 20.274 47.969 16.007 1.00 83.70 O ATOM 799 CB TRP 98 20.530 45.064 15.187 1.00 83.70 C ATOM 800 CG TRP 98 19.475 44.791 14.151 1.00 83.70 C ATOM 801 CD1 TRP 98 18.187 45.224 14.088 1.00 83.70 C ATOM 802 CD2 TRP 98 19.677 43.949 13.005 1.00 83.70 C ATOM 803 CE2 TRP 98 18.475 43.919 12.301 1.00 83.70 C ATOM 804 CE3 TRP 98 20.774 43.258 12.580 1.00 83.70 C ATOM 805 NE1 TRP 98 17.568 44.704 12.978 1.00 83.70 N ATOM 806 CZ2 TRP 98 18.350 43.192 11.152 1.00 83.70 C ATOM 807 CZ3 TRP 98 20.646 42.528 11.418 1.00 83.70 C ATOM 808 CH2 TRP 98 19.456 42.496 10.720 1.00 83.70 C ATOM 809 N ARG 99 20.535 48.166 13.765 1.00159.01 N ATOM 810 CA ARG 99 19.847 49.421 13.611 1.00159.01 C ATOM 811 C ARG 99 18.358 49.307 13.790 1.00159.01 C ATOM 812 O ARG 99 17.751 50.169 14.424 1.00159.01 O ATOM 813 CB ARG 99 20.106 50.074 12.242 1.00159.01 C ATOM 814 CG ARG 99 19.663 49.229 11.047 1.00159.01 C ATOM 815 CD ARG 99 19.997 49.878 9.703 1.00159.01 C ATOM 816 NE ARG 99 19.279 51.183 9.654 1.00159.01 N ATOM 817 CZ ARG 99 19.949 52.320 9.304 1.00159.01 C ATOM 818 NH1 ARG 99 21.278 52.263 8.997 1.00159.01 N ATOM 819 NH2 ARG 99 19.291 53.515 9.272 1.00159.01 N ATOM 820 N ASN 100 17.720 48.247 13.248 1.00 53.88 N ATOM 821 CA ASN 100 16.281 48.183 13.294 1.00 53.88 C ATOM 822 C ASN 100 15.866 47.666 14.633 1.00 53.88 C ATOM 823 O ASN 100 15.886 46.464 14.893 1.00 53.88 O ATOM 824 CB ASN 100 15.675 47.242 12.236 1.00 53.88 C ATOM 825 CG ASN 100 15.906 47.847 10.857 1.00 53.88 C ATOM 826 ND2 ASN 100 16.499 47.045 9.933 1.00 53.88 N ATOM 827 OD1 ASN 100 15.570 49.005 10.609 1.00 53.88 O ATOM 828 N GLN 101 15.399 48.572 15.504 1.00 55.86 N ATOM 829 CA GLN 101 15.079 48.195 16.845 1.00 55.86 C ATOM 830 C GLN 101 13.976 47.188 16.813 1.00 55.86 C ATOM 831 O GLN 101 13.929 46.279 17.641 1.00 55.86 O ATOM 832 CB GLN 101 14.681 49.391 17.725 1.00 55.86 C ATOM 833 CG GLN 101 14.651 49.057 19.215 1.00 55.86 C ATOM 834 CD GLN 101 14.673 50.371 19.980 1.00 55.86 C ATOM 835 NE2 GLN 101 14.809 50.280 21.330 1.00 55.86 N ATOM 836 OE1 GLN 101 14.583 51.450 19.396 1.00 55.86 O ATOM 837 N THR 102 13.052 47.318 15.847 1.00 97.08 N ATOM 838 CA THR 102 11.962 46.393 15.787 1.00 97.08 C ATOM 839 C THR 102 12.500 45.005 15.569 1.00 97.08 C ATOM 840 O THR 102 12.047 44.057 16.209 1.00 97.08 O ATOM 841 CB THR 102 10.978 46.714 14.698 1.00 97.08 C ATOM 842 CG2 THR 102 11.630 46.499 13.322 1.00 97.08 C ATOM 843 OG1 THR 102 9.827 45.895 14.835 1.00 97.08 O ATOM 844 N GLY 103 13.489 44.849 14.663 1.00 21.23 N ATOM 845 CA GLY 103 14.065 43.564 14.370 1.00 21.23 C ATOM 846 C GLY 103 14.775 43.052 15.582 1.00 21.23 C ATOM 847 O GLY 103 14.753 41.858 15.879 1.00 21.23 O ATOM 848 N TRP 104 15.439 43.965 16.309 1.00 73.06 N ATOM 849 CA TRP 104 16.216 43.633 17.466 1.00 73.06 C ATOM 850 C TRP 104 15.326 43.029 18.505 1.00 73.06 C ATOM 851 O TRP 104 15.692 42.054 19.159 1.00 73.06 O ATOM 852 CB TRP 104 16.912 44.878 18.044 1.00 73.06 C ATOM 853 CG TRP 104 17.712 44.662 19.303 1.00 73.06 C ATOM 854 CD1 TRP 104 18.842 43.927 19.508 1.00 73.06 C ATOM 855 CD2 TRP 104 17.408 45.299 20.553 1.00 73.06 C ATOM 856 CE2 TRP 104 18.385 44.902 21.466 1.00 73.06 C ATOM 857 CE3 TRP 104 16.402 46.150 20.909 1.00 73.06 C ATOM 858 NE1 TRP 104 19.257 44.057 20.812 1.00 73.06 N ATOM 859 CZ2 TRP 104 18.369 45.353 22.754 1.00 73.06 C ATOM 860 CZ3 TRP 104 16.386 46.598 22.211 1.00 73.06 C ATOM 861 CH2 TRP 104 17.350 46.207 23.116 1.00 73.06 C ATOM 862 N ASP 105 14.113 43.583 18.677 1.00 38.51 N ATOM 863 CA ASP 105 13.231 43.066 19.682 1.00 38.51 C ATOM 864 C ASP 105 12.934 41.633 19.370 1.00 38.51 C ATOM 865 O ASP 105 12.869 40.797 20.272 1.00 38.51 O ATOM 866 CB ASP 105 11.914 43.853 19.788 1.00 38.51 C ATOM 867 CG ASP 105 12.245 45.173 20.475 1.00 38.51 C ATOM 868 OD1 ASP 105 13.202 45.177 21.295 1.00 38.51 O ATOM 869 OD2 ASP 105 11.559 46.189 20.194 1.00 38.51 O ATOM 870 N ALA 106 12.751 41.306 18.079 1.00 25.85 N ATOM 871 CA ALA 106 12.463 39.957 17.682 1.00 25.85 C ATOM 872 C ALA 106 13.631 39.085 18.028 1.00 25.85 C ATOM 873 O ALA 106 13.456 37.964 18.502 1.00 25.85 O ATOM 874 CB ALA 106 12.213 39.824 16.170 1.00 25.85 C ATOM 875 N TYR 107 14.863 39.584 17.808 1.00 72.10 N ATOM 876 CA TYR 107 16.036 38.795 18.059 1.00 72.10 C ATOM 877 C TYR 107 16.142 38.491 19.518 1.00 72.10 C ATOM 878 O TYR 107 16.576 37.404 19.900 1.00 72.10 O ATOM 879 CB TYR 107 17.357 39.452 17.627 1.00 72.10 C ATOM 880 CG TYR 107 17.371 39.502 16.136 1.00 72.10 C ATOM 881 CD1 TYR 107 17.487 38.345 15.400 1.00 72.10 C ATOM 882 CD2 TYR 107 17.296 40.705 15.470 1.00 72.10 C ATOM 883 CE1 TYR 107 17.507 38.385 14.025 1.00 72.10 C ATOM 884 CE2 TYR 107 17.316 40.753 14.094 1.00 72.10 C ATOM 885 CZ TYR 107 17.419 39.590 13.369 1.00 72.10 C ATOM 886 OH TYR 107 17.442 39.631 11.959 1.00 72.10 O ATOM 887 N VAL 108 15.777 39.461 20.374 1.00 48.83 N ATOM 888 CA VAL 108 15.890 39.264 21.790 1.00 48.83 C ATOM 889 C VAL 108 15.034 38.108 22.207 1.00 48.83 C ATOM 890 O VAL 108 15.461 37.260 22.989 1.00 48.83 O ATOM 891 CB VAL 108 15.440 40.457 22.583 1.00 48.83 C ATOM 892 CG1 VAL 108 15.440 40.078 24.075 1.00 48.83 C ATOM 893 CG2 VAL 108 16.349 41.655 22.246 1.00 48.83 C ATOM 894 N GLN 109 13.791 38.043 21.699 1.00 50.45 N ATOM 895 CA GLN 109 12.923 36.983 22.123 1.00 50.45 C ATOM 896 C GLN 109 13.448 35.669 21.648 1.00 50.45 C ATOM 897 O GLN 109 13.413 34.682 22.384 1.00 50.45 O ATOM 898 CB GLN 109 11.469 37.162 21.664 1.00 50.45 C ATOM 899 CG GLN 109 10.820 38.364 22.358 1.00 50.45 C ATOM 900 CD GLN 109 9.324 38.348 22.093 1.00 50.45 C ATOM 901 NE2 GLN 109 8.804 39.460 21.511 1.00 50.45 N ATOM 902 OE1 GLN 109 8.634 37.376 22.399 1.00 50.45 O ATOM 903 N SER 110 13.962 35.619 20.406 1.00 86.83 N ATOM 904 CA SER 110 14.440 34.372 19.887 1.00 86.83 C ATOM 905 C SER 110 15.617 33.916 20.690 1.00 86.83 C ATOM 906 O SER 110 15.730 32.740 21.037 1.00 86.83 O ATOM 907 CB SER 110 14.887 34.463 18.421 1.00 86.83 C ATOM 908 OG SER 110 15.280 33.177 17.969 1.00 86.83 O ATOM 909 N CYS 111 16.522 34.853 21.021 1.00 90.80 N ATOM 910 CA CYS 111 17.716 34.520 21.740 1.00 90.80 C ATOM 911 C CYS 111 17.315 33.992 23.086 1.00 90.80 C ATOM 912 O CYS 111 17.880 33.021 23.590 1.00 90.80 O ATOM 913 CB CYS 111 18.614 35.752 21.920 1.00 90.80 C ATOM 914 SG CYS 111 20.324 35.308 22.321 1.00 90.80 S ATOM 915 N ARG 112 16.300 34.622 23.700 1.00 64.87 N ATOM 916 CA ARG 112 15.837 34.176 24.978 1.00 64.87 C ATOM 917 C ARG 112 15.350 32.775 24.803 1.00 64.87 C ATOM 918 O ARG 112 15.627 31.920 25.632 1.00 64.87 O ATOM 919 CB ARG 112 14.676 35.021 25.514 1.00 64.87 C ATOM 920 CG ARG 112 15.110 36.427 25.925 1.00 64.87 C ATOM 921 CD ARG 112 13.927 37.364 26.151 1.00 64.87 C ATOM 922 NE ARG 112 14.452 38.642 26.700 1.00 64.87 N ATOM 923 CZ ARG 112 14.501 38.808 28.053 1.00 64.87 C ATOM 924 NH1 ARG 112 14.113 37.789 28.874 1.00 64.87 N ATOM 925 NH2 ARG 112 14.937 39.989 28.582 1.00 64.87 N ATOM 926 N ALA 113 14.658 32.496 23.687 1.00 57.84 N ATOM 927 CA ALA 113 14.101 31.209 23.365 1.00 57.84 C ATOM 928 C ALA 113 15.222 30.226 23.292 1.00 57.84 C ATOM 929 O ALA 113 15.031 29.023 23.464 1.00 57.84 O ATOM 930 CB ALA 113 13.388 31.192 22.001 1.00 57.84 C ATOM 931 N ILE 114 16.416 30.701 22.933 1.00 69.11 N ATOM 932 CA ILE 114 17.544 29.831 22.917 1.00 69.11 C ATOM 933 C ILE 114 17.887 29.404 24.316 1.00 69.11 C ATOM 934 O ILE 114 18.214 28.245 24.563 1.00 69.11 O ATOM 935 CB ILE 114 18.766 30.495 22.353 1.00 69.11 C ATOM 936 CG1 ILE 114 18.513 30.945 20.903 1.00 69.11 C ATOM 937 CG2 ILE 114 19.942 29.517 22.509 1.00 69.11 C ATOM 938 CD1 ILE 114 19.581 31.901 20.367 1.00 69.11 C ATOM 939 N TRP 115 17.824 30.319 25.298 1.00230.88 N ATOM 940 CA TRP 115 18.447 29.925 26.522 1.00230.88 C ATOM 941 C TRP 115 17.822 28.715 27.284 1.00230.88 C ATOM 942 O TRP 115 18.594 27.775 27.403 1.00230.88 O ATOM 943 CB TRP 115 18.932 31.151 27.313 1.00230.88 C ATOM 944 CG TRP 115 19.983 31.966 26.587 1.00230.88 C ATOM 945 CD1 TRP 115 19.800 32.880 25.589 1.00230.88 C ATOM 946 CD2 TRP 115 21.386 31.984 26.898 1.00230.88 C ATOM 947 CE2 TRP 115 21.984 32.925 26.056 1.00230.88 C ATOM 948 CE3 TRP 115 22.113 31.288 27.819 1.00230.88 C ATOM 949 NE1 TRP 115 20.997 33.468 25.259 1.00230.88 N ATOM 950 CZ2 TRP 115 23.324 33.182 26.122 1.00230.88 C ATOM 951 CZ3 TRP 115 23.469 31.534 27.870 1.00230.88 C ATOM 952 CH2 TRP 115 24.061 32.461 27.037 1.00230.88 C ATOM 953 N ASN 116 16.496 28.666 27.732 1.00444.12 N ATOM 954 CA ASN 116 15.497 27.740 28.415 1.00444.12 C ATOM 955 C ASN 116 14.651 28.127 29.839 1.00444.12 C ATOM 956 O ASN 116 15.248 27.821 30.860 1.00444.12 O ATOM 957 CB ASN 116 16.200 26.367 28.398 1.00444.12 C ATOM 958 CG ASN 116 16.661 25.925 27.007 1.00444.12 C ATOM 959 ND2 ASN 116 16.375 26.670 25.902 1.00444.12 N ATOM 960 OD1 ASN 116 17.344 24.906 26.944 1.00444.12 O ATOM 961 N ASP 117 13.352 28.796 30.101 1.00528.83 N ATOM 962 CA ASP 117 12.609 29.177 31.487 1.00528.83 C ATOM 963 C ASP 117 12.628 30.481 30.327 1.00528.83 C ATOM 964 O ASP 117 12.604 30.005 29.195 1.00528.83 O ATOM 965 CB ASP 117 14.002 29.201 32.154 1.00528.83 C ATOM 966 CG ASP 117 14.464 30.642 32.339 1.00528.83 C ATOM 967 OD1 ASP 117 15.063 31.191 31.376 1.00528.83 O ATOM 968 OD2 ASP 117 14.227 31.217 33.434 1.00528.83 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 739 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 61.50 72.7 176 100.0 176 ARMSMC SECONDARY STRUCTURE . . 21.77 92.9 84 100.0 84 ARMSMC SURFACE . . . . . . . . 70.10 67.9 106 100.0 106 ARMSMC BURIED . . . . . . . . 45.48 80.0 70 100.0 70 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 76.14 52.6 78 100.0 78 ARMSSC1 RELIABLE SIDE CHAINS . 72.30 57.1 70 100.0 70 ARMSSC1 SECONDARY STRUCTURE . . 78.00 47.2 36 100.0 36 ARMSSC1 SURFACE . . . . . . . . 76.17 55.1 49 100.0 49 ARMSSC1 BURIED . . . . . . . . 76.08 48.3 29 100.0 29 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 75.68 53.3 60 100.0 60 ARMSSC2 RELIABLE SIDE CHAINS . 75.64 52.8 53 100.0 53 ARMSSC2 SECONDARY STRUCTURE . . 82.46 50.0 28 100.0 28 ARMSSC2 SURFACE . . . . . . . . 75.57 54.1 37 100.0 37 ARMSSC2 BURIED . . . . . . . . 75.85 52.2 23 100.0 23 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 75.92 33.3 27 100.0 27 ARMSSC3 RELIABLE SIDE CHAINS . 85.53 35.3 17 100.0 17 ARMSSC3 SECONDARY STRUCTURE . . 79.42 45.5 11 100.0 11 ARMSSC3 SURFACE . . . . . . . . 73.54 36.4 22 100.0 22 ARMSSC3 BURIED . . . . . . . . 85.59 20.0 5 100.0 5 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 62.79 50.0 12 100.0 12 ARMSSC4 RELIABLE SIDE CHAINS . 62.79 50.0 12 100.0 12 ARMSSC4 SECONDARY STRUCTURE . . 69.67 75.0 4 100.0 4 ARMSSC4 SURFACE . . . . . . . . 68.76 40.0 10 100.0 10 ARMSSC4 BURIED . . . . . . . . 3.23 100.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 12.48 (Number of atoms: 89) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 12.48 89 100.0 89 CRMSCA CRN = ALL/NP . . . . . 0.1402 CRMSCA SECONDARY STRUCTURE . . 12.12 42 100.0 42 CRMSCA SURFACE . . . . . . . . 13.88 54 100.0 54 CRMSCA BURIED . . . . . . . . 9.95 35 100.0 35 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 12.54 439 100.0 439 CRMSMC SECONDARY STRUCTURE . . 12.22 207 100.0 207 CRMSMC SURFACE . . . . . . . . 13.95 268 100.0 268 CRMSMC BURIED . . . . . . . . 9.93 171 100.0 171 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 13.52 383 100.0 383 CRMSSC RELIABLE SIDE CHAINS . 13.34 333 100.0 333 CRMSSC SECONDARY STRUCTURE . . 13.04 192 100.0 192 CRMSSC SURFACE . . . . . . . . 15.15 225 100.0 225 CRMSSC BURIED . . . . . . . . 10.78 158 100.0 158 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 12.97 739 100.0 739 CRMSALL SECONDARY STRUCTURE . . 12.60 360 100.0 360 CRMSALL SURFACE . . . . . . . . 14.44 441 100.0 441 CRMSALL BURIED . . . . . . . . 10.42 298 100.0 298 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 83.905 0.731 0.763 89 100.0 89 ERRCA SECONDARY STRUCTURE . . 68.255 0.703 0.738 42 100.0 42 ERRCA SURFACE . . . . . . . . 92.015 0.719 0.751 54 100.0 54 ERRCA BURIED . . . . . . . . 71.392 0.748 0.783 35 100.0 35 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 84.540 0.732 0.766 439 100.0 439 ERRMC SECONDARY STRUCTURE . . 68.723 0.703 0.740 207 100.0 207 ERRMC SURFACE . . . . . . . . 92.398 0.719 0.753 268 100.0 268 ERRMC BURIED . . . . . . . . 72.224 0.752 0.786 171 100.0 171 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 92.914 0.742 0.776 383 100.0 383 ERRSC RELIABLE SIDE CHAINS . 94.727 0.749 0.781 333 100.0 333 ERRSC SECONDARY STRUCTURE . . 79.092 0.724 0.760 192 100.0 192 ERRSC SURFACE . . . . . . . . 100.621 0.725 0.761 225 100.0 225 ERRSC BURIED . . . . . . . . 81.938 0.766 0.796 158 100.0 158 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 88.631 0.738 0.771 739 100.0 739 ERRALL SECONDARY STRUCTURE . . 74.054 0.715 0.751 360 100.0 360 ERRALL SURFACE . . . . . . . . 96.499 0.724 0.758 441 100.0 441 ERRALL BURIED . . . . . . . . 76.988 0.758 0.790 298 100.0 298 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 2 5 5 6 39 89 89 DISTCA CA (P) 2.25 5.62 5.62 6.74 43.82 89 DISTCA CA (RMS) 0.96 1.26 1.26 2.21 7.02 DISTCA ALL (N) 6 23 27 50 299 739 739 DISTALL ALL (P) 0.81 3.11 3.65 6.77 40.46 739 DISTALL ALL (RMS) 0.79 1.20 1.52 3.06 7.26 DISTALL END of the results output