####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 89 ( 740), selected 89 , name T0608TS018_1-D1 # Molecule2: number of CA atoms 89 ( 739), selected 89 , name T0608-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0608TS018_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 41 - 54 4.98 92.47 LONGEST_CONTINUOUS_SEGMENT: 14 43 - 56 4.83 95.47 LONGEST_CONTINUOUS_SEGMENT: 14 44 - 57 4.84 93.97 LONGEST_CONTINUOUS_SEGMENT: 14 45 - 58 4.96 94.03 LCS_AVERAGE: 12.80 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 46 - 53 1.48 93.45 LCS_AVERAGE: 5.26 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 46 - 50 0.94 92.96 LONGEST_CONTINUOUS_SEGMENT: 5 80 - 84 0.81 73.18 LCS_AVERAGE: 3.90 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 89 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT V 29 V 29 3 4 9 3 3 3 4 4 4 4 4 5 7 7 8 8 9 9 10 10 10 11 12 LCS_GDT S 30 S 30 3 4 9 3 3 3 4 4 4 4 5 6 7 7 9 9 10 10 11 12 12 12 12 LCS_GDT G 31 G 31 3 4 11 3 3 3 4 4 4 4 5 6 8 8 9 9 10 10 11 12 12 12 12 LCS_GDT F 32 F 32 3 4 11 0 3 3 4 4 4 4 7 7 8 8 10 10 10 10 11 12 12 12 12 LCS_GDT Q 33 Q 33 3 3 11 3 3 3 3 3 4 5 7 7 9 9 10 10 10 10 11 12 12 12 12 LCS_GDT R 34 R 34 3 3 11 3 3 3 3 3 4 5 7 7 9 9 10 10 10 10 11 12 12 12 12 LCS_GDT L 35 L 35 3 4 11 3 3 3 4 4 4 5 7 7 9 9 10 10 10 10 11 12 12 12 13 LCS_GDT Q 36 Q 36 4 5 11 3 4 4 4 4 5 6 7 8 9 9 10 10 10 11 12 12 12 15 17 LCS_GDT K 37 K 37 4 5 11 3 4 4 4 4 5 6 7 8 9 9 10 10 10 11 13 15 16 16 17 LCS_GDT P 38 P 38 4 5 11 3 4 4 4 4 5 6 7 8 9 9 10 10 10 11 14 15 16 16 17 LCS_GDT V 39 V 39 4 5 11 3 4 4 4 4 5 6 7 8 9 9 10 10 10 11 14 15 16 16 17 LCS_GDT V 40 V 40 3 5 11 3 3 3 3 4 5 6 7 8 9 9 10 10 10 11 13 15 16 16 17 LCS_GDT S 41 S 41 4 5 14 3 4 4 4 4 5 6 7 8 10 12 12 13 13 13 14 15 16 17 18 LCS_GDT Q 42 Q 42 4 5 14 3 4 4 4 4 5 6 6 8 10 12 12 13 13 13 14 15 16 17 18 LCS_GDT P 43 P 43 4 5 14 3 4 4 4 4 5 6 6 9 10 12 12 13 13 14 15 15 16 17 18 LCS_GDT D 44 D 44 4 5 14 3 4 4 4 4 5 6 6 7 10 12 12 13 13 14 15 15 16 17 18 LCS_GDT F 45 F 45 3 4 14 3 3 3 3 4 5 8 8 9 10 12 12 13 13 14 15 15 16 17 18 LCS_GDT R 46 R 46 5 8 14 3 4 5 7 8 8 8 8 10 11 12 12 13 13 14 15 15 16 17 18 LCS_GDT R 47 R 47 5 8 14 4 4 6 7 8 8 8 8 10 11 12 12 13 13 14 15 15 16 17 18 LCS_GDT Q 48 Q 48 5 8 14 4 4 6 7 8 8 8 8 10 11 12 12 13 13 14 15 15 16 17 18 LCS_GDT P 49 P 49 5 8 14 4 4 6 7 8 8 8 8 10 11 12 12 13 13 14 15 15 16 17 18 LCS_GDT V 50 V 50 5 8 14 4 4 5 7 8 8 8 8 10 11 12 12 13 13 14 15 15 16 17 18 LCS_GDT S 51 S 51 4 8 14 4 4 6 7 8 8 8 8 10 11 12 12 13 13 14 15 15 16 17 18 LCS_GDT E 52 E 52 4 8 14 4 4 6 7 8 8 8 8 10 11 12 12 13 13 14 15 15 16 17 18 LCS_GDT T 53 T 53 3 8 14 3 4 6 7 8 8 8 8 10 11 11 12 13 13 14 15 15 16 17 18 LCS_GDT M 54 M 54 3 4 14 3 3 3 3 3 4 5 7 10 11 11 12 12 13 14 15 15 16 17 18 LCS_GDT Q 55 Q 55 3 4 14 0 3 3 3 3 4 5 7 9 11 11 12 12 13 14 15 15 16 17 18 LCS_GDT V 56 V 56 3 3 14 1 3 3 3 3 4 7 7 10 11 11 12 12 13 14 15 15 16 17 18 LCS_GDT Y 57 Y 57 3 3 14 3 3 3 3 4 5 7 7 8 10 10 12 12 13 14 15 15 16 17 18 LCS_GDT L 58 L 58 3 3 14 3 3 3 3 4 4 7 7 8 8 8 10 10 12 14 15 15 16 17 18 LCS_GDT K 59 K 59 4 5 11 3 4 4 5 5 5 7 7 8 8 8 9 10 12 13 15 15 16 17 18 LCS_GDT Q 60 Q 60 4 5 11 3 4 4 5 5 5 7 7 8 8 8 10 11 13 14 15 15 16 17 18 LCS_GDT A 61 A 61 4 5 11 3 4 4 5 5 5 7 7 8 8 8 9 10 11 12 14 15 16 17 18 LCS_GDT A 62 A 62 4 5 11 3 4 4 5 5 5 7 7 8 8 8 9 10 11 12 14 14 16 17 18 LCS_GDT D 63 D 63 4 5 11 3 4 4 5 5 5 6 6 8 8 8 9 9 10 10 11 12 13 13 14 LCS_GDT P 64 P 64 4 5 9 3 4 4 4 4 5 6 6 7 7 8 8 8 10 10 11 12 13 13 14 LCS_GDT G 65 G 65 4 5 9 3 4 4 4 4 5 6 6 7 7 8 8 8 10 10 11 12 13 13 14 LCS_GDT R 66 R 66 3 5 9 3 3 3 3 3 5 5 5 7 7 8 8 8 10 10 11 12 13 13 14 LCS_GDT D 67 D 67 3 3 9 3 3 3 3 3 4 4 5 6 7 8 8 8 10 10 11 12 13 13 14 LCS_GDT V 68 V 68 3 3 9 3 3 3 3 3 4 4 5 6 7 8 8 8 10 10 11 12 13 13 14 LCS_GDT G 69 G 69 3 3 9 1 3 3 3 3 4 4 5 6 7 8 8 8 10 10 11 12 13 13 14 LCS_GDT L 70 L 70 3 3 9 3 3 3 3 3 4 4 5 6 7 8 8 8 10 10 11 12 13 13 14 LCS_GDT Y 71 Y 71 3 3 9 3 3 3 3 3 4 4 5 6 7 8 8 8 10 10 11 12 13 13 14 LCS_GDT W 72 W 72 3 3 9 3 3 3 3 3 4 4 5 6 7 8 8 8 9 10 11 12 13 13 14 LCS_GDT M 73 M 73 3 3 9 3 3 3 3 3 4 4 5 6 7 8 8 8 9 10 11 12 13 13 14 LCS_GDT A 74 A 74 3 4 9 3 3 3 4 4 4 5 5 6 7 8 8 8 9 10 11 12 13 13 14 LCS_GDT T 75 T 75 3 4 9 3 3 3 4 4 4 5 5 6 7 7 8 8 9 10 11 11 12 12 14 LCS_GDT D 76 D 76 3 4 11 3 3 3 4 4 4 5 5 6 7 7 10 10 10 10 11 12 12 12 14 LCS_GDT F 77 F 77 3 5 12 0 3 3 4 5 5 7 8 9 9 9 10 10 11 11 11 12 13 13 14 LCS_GDT E 78 E 78 3 5 12 0 3 3 4 5 6 7 8 9 9 9 10 10 11 12 12 12 13 13 14 LCS_GDT N 79 N 79 3 7 12 1 3 3 4 7 7 7 9 9 10 11 11 11 11 12 12 12 13 13 14 LCS_GDT R 80 R 80 5 7 12 3 5 5 5 7 7 9 9 10 10 11 11 11 11 12 12 12 13 13 14 LCS_GDT R 81 R 81 5 7 12 4 5 5 5 7 7 9 9 10 10 11 11 11 11 12 12 12 13 13 14 LCS_GDT F 82 F 82 5 7 12 4 5 5 5 7 7 9 9 10 10 11 11 11 11 12 12 12 13 13 14 LCS_GDT P 83 P 83 5 7 12 4 5 5 5 7 7 9 9 10 10 11 11 11 11 12 12 12 13 13 14 LCS_GDT G 84 G 84 5 7 12 4 5 5 5 7 7 9 9 10 10 11 11 11 11 12 12 12 13 13 14 LCS_GDT K 85 K 85 4 7 12 3 4 4 5 7 7 9 9 10 10 11 11 11 11 12 12 12 13 13 14 LCS_GDT V 86 V 86 4 6 12 3 4 4 5 5 7 9 9 10 10 11 11 11 11 12 12 12 13 13 14 LCS_GDT S 87 S 87 4 6 12 3 4 4 5 6 7 9 9 10 10 11 11 11 11 12 12 12 13 14 16 LCS_GDT P 88 P 88 4 6 12 3 4 4 4 5 6 9 9 10 10 11 11 11 11 12 12 12 13 15 16 LCS_GDT S 89 S 89 4 4 12 3 4 4 4 4 5 6 8 10 10 11 11 11 11 12 12 14 14 15 16 LCS_GDT G 90 G 90 3 3 12 0 3 3 3 3 4 4 5 6 7 7 8 9 10 13 13 14 14 15 16 LCS_GDT F 91 F 91 3 3 12 0 3 3 3 3 4 4 5 6 7 7 8 9 12 13 13 14 14 15 16 LCS_GDT Q 92 Q 92 3 3 12 0 3 3 3 3 4 4 6 6 7 9 11 12 12 13 13 14 14 15 16 LCS_GDT K 93 K 93 3 3 12 3 3 3 3 3 4 4 6 7 10 11 11 12 12 13 14 14 14 15 16 LCS_GDT L 94 L 94 3 4 12 3 3 3 3 4 4 5 6 8 10 11 11 12 12 13 14 14 14 15 16 LCS_GDT Y 95 Y 95 3 4 12 3 3 3 3 4 4 5 6 7 10 11 11 12 12 13 14 14 14 15 16 LCS_GDT R 96 R 96 3 4 12 3 3 3 3 4 4 6 6 8 10 11 11 12 12 13 14 14 14 15 16 LCS_GDT Q 97 Q 97 3 4 12 3 3 3 4 5 5 6 7 8 10 11 11 12 12 13 14 14 14 15 16 LCS_GDT W 98 W 98 3 4 12 3 3 3 3 5 5 6 7 8 10 11 11 12 12 13 14 14 14 15 16 LCS_GDT R 99 R 99 3 5 12 3 3 4 4 5 5 6 7 8 10 11 11 12 12 13 14 14 14 15 16 LCS_GDT N 100 N 100 3 5 12 3 3 4 4 4 5 6 7 8 10 11 11 12 12 13 14 14 14 15 16 LCS_GDT Q 101 Q 101 3 5 12 3 3 4 4 5 5 6 7 8 10 11 11 12 12 13 14 14 14 15 16 LCS_GDT T 102 T 102 3 5 12 3 3 4 4 5 5 6 7 8 10 11 11 12 12 13 14 14 14 15 16 LCS_GDT G 103 G 103 3 5 12 3 3 4 4 4 5 6 7 7 9 11 11 12 12 12 14 14 14 15 15 LCS_GDT W 104 W 104 3 4 12 3 3 3 3 4 4 6 6 7 7 8 9 11 11 12 14 14 14 15 15 LCS_GDT D 105 D 105 3 4 11 3 3 3 3 4 4 6 6 7 7 8 9 11 11 12 14 14 14 15 15 LCS_GDT A 106 A 106 3 4 11 3 3 3 3 4 4 6 6 7 7 8 9 11 11 12 14 14 14 15 15 LCS_GDT Y 107 Y 107 3 4 10 3 3 3 3 4 4 4 6 7 7 8 9 9 10 11 11 12 13 14 15 LCS_GDT V 108 V 108 3 3 10 3 3 3 3 3 4 4 5 7 7 8 9 9 10 11 11 12 13 14 14 LCS_GDT Q 109 Q 109 3 3 10 0 3 3 3 3 4 4 5 6 7 8 9 9 10 11 11 12 13 14 14 LCS_GDT S 110 S 110 3 3 10 3 3 3 3 3 4 4 6 6 7 7 9 9 10 11 11 12 13 14 14 LCS_GDT C 111 C 111 3 3 10 3 3 3 3 3 4 4 6 6 7 7 8 9 9 11 11 12 13 14 14 LCS_GDT R 112 R 112 3 3 9 3 3 3 3 3 4 4 6 6 7 7 8 9 9 11 11 12 13 14 14 LCS_GDT A 113 A 113 3 3 9 3 3 3 3 4 4 5 6 6 7 7 8 9 9 10 11 12 13 14 14 LCS_GDT I 114 I 114 3 4 9 3 3 3 4 4 4 5 6 6 7 7 8 9 9 10 11 12 13 14 14 LCS_GDT W 115 W 115 3 4 9 3 3 3 4 4 4 5 6 6 6 7 8 8 9 10 11 12 13 14 14 LCS_GDT N 116 N 116 3 4 8 3 3 3 4 4 4 5 5 5 6 7 8 8 8 10 11 11 11 12 13 LCS_GDT D 117 D 117 3 4 8 3 3 3 4 4 4 5 5 5 6 7 8 8 8 10 11 11 11 12 13 LCS_AVERAGE LCS_A: 7.32 ( 3.90 5.26 12.80 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 5 6 7 8 8 9 9 10 11 12 12 13 13 14 15 15 16 17 18 GDT PERCENT_AT 4.49 5.62 6.74 7.87 8.99 8.99 10.11 10.11 11.24 12.36 13.48 13.48 14.61 14.61 15.73 16.85 16.85 17.98 19.10 20.22 GDT RMS_LOCAL 0.20 0.81 0.99 1.23 1.48 1.48 2.64 2.64 3.15 3.58 4.42 4.02 4.47 4.30 4.83 5.11 5.11 5.45 5.80 6.22 GDT RMS_ALL_AT 92.94 73.18 93.53 92.28 93.45 93.45 75.31 75.31 75.47 96.92 94.62 94.47 94.93 94.23 95.47 93.77 93.77 93.84 93.95 93.69 # Checking swapping # possible swapping detected: F 32 F 32 # possible swapping detected: D 44 D 44 # possible swapping detected: F 45 F 45 # possible swapping detected: Y 57 Y 57 # possible swapping detected: D 63 D 63 # possible swapping detected: Y 71 Y 71 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA V 29 V 29 134.778 0 0.104 1.084 136.368 0.000 0.000 LGA S 30 S 30 134.908 0 0.064 0.614 136.466 0.000 0.000 LGA G 31 G 31 136.508 0 0.610 0.610 136.508 0.000 0.000 LGA F 32 F 32 132.522 0 0.625 1.440 133.642 0.000 0.000 LGA Q 33 Q 33 127.592 0 0.630 0.728 129.160 0.000 0.000 LGA R 34 R 34 126.470 0 0.640 1.133 127.658 0.000 0.000 LGA L 35 L 35 127.450 0 0.670 1.446 132.583 0.000 0.000 LGA Q 36 Q 36 122.116 0 0.723 1.344 123.936 0.000 0.000 LGA K 37 K 37 120.584 0 0.053 0.888 121.795 0.000 0.000 LGA P 38 P 38 123.641 0 0.651 0.635 125.091 0.000 0.000 LGA V 39 V 39 120.323 0 0.659 0.958 121.937 0.000 0.000 LGA V 40 V 40 119.606 0 0.660 0.876 121.218 0.000 0.000 LGA S 41 S 41 113.093 0 0.713 0.848 115.343 0.000 0.000 LGA Q 42 Q 42 107.140 0 0.089 1.356 109.463 0.000 0.000 LGA P 43 P 43 104.633 0 0.652 0.620 105.104 0.000 0.000 LGA D 44 D 44 102.299 0 0.594 1.128 103.754 0.000 0.000 LGA F 45 F 45 103.078 0 0.581 1.434 110.937 0.000 0.000 LGA R 46 R 46 101.517 0 0.662 1.036 105.434 0.000 0.000 LGA R 47 R 47 98.763 0 0.687 1.140 99.057 0.000 0.000 LGA Q 48 Q 48 98.802 0 0.209 1.180 101.771 0.000 0.000 LGA P 49 P 49 94.872 0 0.167 0.193 95.871 0.000 0.000 LGA V 50 V 50 96.583 0 0.150 0.141 100.406 0.000 0.000 LGA S 51 S 51 92.057 0 0.078 0.680 94.393 0.000 0.000 LGA E 52 E 52 92.520 0 0.674 1.010 92.612 0.000 0.000 LGA T 53 T 53 90.193 0 0.579 0.610 91.127 0.000 0.000 LGA M 54 M 54 88.723 0 0.658 1.416 91.111 0.000 0.000 LGA Q 55 Q 55 87.506 0 0.614 1.294 88.766 0.000 0.000 LGA V 56 V 56 87.952 0 0.613 1.461 90.512 0.000 0.000 LGA Y 57 Y 57 84.938 0 0.617 1.405 85.837 0.000 0.000 LGA L 58 L 58 84.547 0 0.672 0.724 85.706 0.000 0.000 LGA K 59 K 59 83.892 0 0.642 1.297 86.015 0.000 0.000 LGA Q 60 Q 60 85.125 0 0.578 0.976 90.880 0.000 0.000 LGA A 61 A 61 81.027 0 0.103 0.132 82.155 0.000 0.000 LGA A 62 A 62 80.572 0 0.667 0.623 81.312 0.000 0.000 LGA D 63 D 63 75.310 0 0.157 1.136 76.684 0.000 0.000 LGA P 64 P 64 71.825 0 0.666 0.599 76.283 0.000 0.000 LGA G 65 G 65 66.918 0 0.608 0.608 69.046 0.000 0.000 LGA R 66 R 66 62.850 0 0.614 0.736 64.985 0.000 0.000 LGA D 67 D 67 57.582 0 0.625 0.825 59.751 0.000 0.000 LGA V 68 V 68 54.204 0 0.638 0.584 55.765 0.000 0.000 LGA G 69 G 69 49.084 0 0.608 0.608 51.329 0.000 0.000 LGA L 70 L 70 44.968 0 0.641 0.963 48.907 0.000 0.000 LGA Y 71 Y 71 41.113 0 0.610 1.293 42.931 0.000 0.000 LGA W 72 W 72 36.138 0 0.659 0.718 39.662 0.000 0.000 LGA M 73 M 73 31.497 0 0.609 1.144 33.379 0.000 0.000 LGA A 74 A 74 27.133 0 0.683 0.634 29.108 0.000 0.000 LGA T 75 T 75 22.352 0 0.584 0.972 25.203 0.000 0.000 LGA D 76 D 76 19.190 0 0.361 0.880 20.393 0.000 0.000 LGA F 77 F 77 19.231 0 0.523 0.486 26.327 0.000 0.000 LGA E 78 E 78 14.322 0 0.611 1.366 17.153 0.000 0.000 LGA N 79 N 79 8.525 0 0.555 0.896 11.724 13.929 7.321 LGA R 80 R 80 2.463 0 0.598 1.306 8.304 50.833 33.420 LGA R 81 R 81 2.370 0 0.097 1.318 5.399 66.786 59.957 LGA F 82 F 82 2.240 0 0.077 0.130 4.094 66.786 52.511 LGA P 83 P 83 2.135 0 0.686 0.677 4.243 57.976 57.619 LGA G 84 G 84 3.317 0 0.250 0.250 3.317 65.357 65.357 LGA K 85 K 85 1.531 1 0.062 1.280 7.643 75.000 48.942 LGA V 86 V 86 2.690 0 0.140 0.174 3.973 55.595 52.245 LGA S 87 S 87 2.965 0 0.042 0.063 4.641 57.262 49.603 LGA P 88 P 88 3.497 0 0.638 0.742 4.581 43.929 45.646 LGA S 89 S 89 7.456 0 0.652 0.721 11.597 7.857 7.222 LGA G 90 G 90 13.828 0 0.620 0.620 14.924 0.000 0.000 LGA F 91 F 91 15.068 0 0.634 1.413 20.394 0.000 0.000 LGA Q 92 Q 92 16.775 0 0.653 1.469 18.357 0.000 0.000 LGA K 93 K 93 22.118 0 0.604 0.645 26.222 0.000 0.000 LGA L 94 L 94 27.727 0 0.622 0.909 32.092 0.000 0.000 LGA Y 95 Y 95 26.396 0 0.563 0.738 29.198 0.000 0.000 LGA R 96 R 96 29.961 0 0.687 1.349 31.457 0.000 0.000 LGA Q 97 Q 97 34.971 0 0.567 1.019 38.348 0.000 0.000 LGA W 98 W 98 38.622 0 0.589 1.189 47.281 0.000 0.000 LGA R 99 R 99 38.749 0 0.676 1.014 40.790 0.000 0.000 LGA N 100 N 100 44.496 0 0.674 1.554 46.666 0.000 0.000 LGA Q 101 Q 101 49.006 0 0.043 1.064 50.909 0.000 0.000 LGA T 102 T 102 53.840 0 0.028 1.127 58.399 0.000 0.000 LGA G 103 G 103 55.678 0 0.672 0.672 55.678 0.000 0.000 LGA W 104 W 104 55.216 0 0.606 1.390 58.534 0.000 0.000 LGA D 105 D 105 53.054 0 0.576 0.647 53.903 0.000 0.000 LGA A 106 A 106 57.339 0 0.640 0.614 59.003 0.000 0.000 LGA Y 107 Y 107 61.255 0 0.615 1.374 63.187 0.000 0.000 LGA V 108 V 108 60.005 0 0.650 1.342 60.758 0.000 0.000 LGA Q 109 Q 109 61.296 0 0.628 1.175 64.671 0.000 0.000 LGA S 110 S 110 65.778 0 0.623 0.995 68.668 0.000 0.000 LGA C 111 C 111 68.016 0 0.595 0.924 72.310 0.000 0.000 LGA R 112 R 112 66.494 0 0.649 1.328 67.599 0.000 0.000 LGA A 113 A 113 70.684 0 0.635 0.593 72.347 0.000 0.000 LGA I 114 I 114 74.054 0 0.611 0.591 76.341 0.000 0.000 LGA W 115 W 115 74.978 0 0.636 0.570 78.626 0.000 0.000 LGA N 116 N 116 74.812 0 0.626 0.865 78.050 0.000 0.000 LGA D 117 D 117 76.522 0 0.535 0.817 80.170 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 89 356 356 100.00 739 739 100.00 89 SUMMARY(RMSD_GDC): 66.646 66.674 66.717 6.307 5.391 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 89 89 4.0 9 2.64 10.112 9.093 0.328 LGA_LOCAL RMSD: 2.643 Number of atoms: 9 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 75.315 Number of assigned atoms: 89 Std_ASGN_ATOMS RMSD: 66.646 Standard rmsd on all 89 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.290367 * X + 0.400907 * Y + -0.868885 * Z + 9.540995 Y_new = 0.938118 * X + 0.298351 * Y + -0.175843 * Z + -102.015175 Z_new = 0.188736 * X + -0.866176 * Y + -0.462730 * Z + -48.855698 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.870965 -0.189874 -2.061445 [DEG: 107.1984 -10.8790 -118.1121 ] ZXZ: -1.371115 2.051868 2.927051 [DEG: -78.5591 117.5634 167.7077 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0608TS018_1-D1 REMARK 2: T0608-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0608TS018_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 89 89 4.0 9 2.64 9.093 66.65 REMARK ---------------------------------------------------------- MOLECULE T0608TS018_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0608 REMARK MODEL 1 REMARK PARENT 2gu1A 1qwyA ATOM 229 N VAL 29 71.809 128.313 123.635 1.00123.52 N ATOM 230 CA VAL 29 72.724 128.313 122.539 1.00123.52 C ATOM 231 CB VAL 29 73.460 127.017 122.365 1.00123.52 C ATOM 232 CG1 VAL 29 74.324 126.768 123.612 1.00123.52 C ATOM 233 CG2 VAL 29 72.436 125.905 122.085 1.00123.52 C ATOM 234 C VAL 29 71.889 128.522 121.324 1.00123.52 C ATOM 235 O VAL 29 70.797 127.968 121.211 1.00123.52 O ATOM 236 N SER 30 72.373 129.360 120.391 1.00169.87 N ATOM 237 CA SER 30 71.600 129.607 119.214 1.00169.87 C ATOM 238 CB SER 30 70.860 130.953 119.231 1.00169.87 C ATOM 239 OG SER 30 70.126 131.118 118.028 1.00169.87 O ATOM 240 C SER 30 72.533 129.634 118.053 1.00169.87 C ATOM 241 O SER 30 73.749 129.737 118.209 1.00169.87 O ATOM 242 N GLY 31 71.962 129.511 116.843 1.00 95.39 N ATOM 243 CA GLY 31 72.740 129.555 115.646 1.00 95.39 C ATOM 244 C GLY 31 72.992 128.148 115.234 1.00 95.39 C ATOM 245 O GLY 31 73.502 127.340 116.008 1.00 95.39 O ATOM 246 N PHE 32 72.625 127.826 113.982 1.00293.59 N ATOM 247 CA PHE 32 72.855 126.510 113.481 1.00293.59 C ATOM 248 CB PHE 32 71.737 125.521 113.854 1.00293.59 C ATOM 249 CG PHE 32 72.119 124.175 113.348 1.00293.59 C ATOM 250 CD1 PHE 32 72.963 123.374 114.082 1.00293.59 C ATOM 251 CD2 PHE 32 71.627 123.710 112.151 1.00293.59 C ATOM 252 CE1 PHE 32 73.321 122.129 113.625 1.00293.59 C ATOM 253 CE2 PHE 32 71.980 122.466 111.690 1.00293.59 C ATOM 254 CZ PHE 32 72.827 121.674 112.426 1.00293.59 C ATOM 255 C PHE 32 72.857 126.641 111.997 1.00293.59 C ATOM 256 O PHE 32 72.207 127.527 111.446 1.00293.59 O ATOM 257 N GLN 33 73.604 125.767 111.302 1.00254.58 N ATOM 258 CA GLN 33 73.590 125.874 109.878 1.00254.58 C ATOM 259 CB GLN 33 74.984 126.039 109.246 1.00254.58 C ATOM 260 CG GLN 33 74.947 126.159 107.719 1.00254.58 C ATOM 261 CD GLN 33 76.375 126.308 107.211 1.00254.58 C ATOM 262 OE1 GLN 33 77.307 125.759 107.798 1.00254.58 O ATOM 263 NE2 GLN 33 76.556 127.063 106.094 1.00254.58 N ATOM 264 C GLN 33 73.028 124.607 109.343 1.00254.58 C ATOM 265 O GLN 33 73.523 123.523 109.642 1.00254.58 O ATOM 266 N ARG 34 71.954 124.709 108.541 1.00257.13 N ATOM 267 CA ARG 34 71.446 123.509 107.958 1.00257.13 C ATOM 268 CB ARG 34 70.030 123.645 107.382 1.00257.13 C ATOM 269 CG ARG 34 68.955 123.836 108.452 1.00257.13 C ATOM 270 CD ARG 34 67.543 123.905 107.872 1.00257.13 C ATOM 271 NE ARG 34 67.287 122.605 107.191 1.00257.13 N ATOM 272 CZ ARG 34 66.422 122.549 106.138 1.00257.13 C ATOM 273 NH1 ARG 34 65.796 123.683 105.709 1.00257.13 N ATOM 274 NH2 ARG 34 66.190 121.360 105.508 1.00257.13 N ATOM 275 C ARG 34 72.377 123.206 106.840 1.00257.13 C ATOM 276 O ARG 34 72.792 124.105 106.110 1.00257.13 O ATOM 277 N LEU 35 72.749 121.925 106.680 1.00215.34 N ATOM 278 CA LEU 35 73.682 121.626 105.641 1.00215.34 C ATOM 279 CB LEU 35 74.883 120.793 106.120 1.00215.34 C ATOM 280 CG LEU 35 75.715 121.507 107.204 1.00215.34 C ATOM 281 CD1 LEU 35 76.924 120.659 107.635 1.00215.34 C ATOM 282 CD2 LEU 35 76.097 122.931 106.768 1.00215.34 C ATOM 283 C LEU 35 72.969 120.831 104.603 1.00215.34 C ATOM 284 O LEU 35 72.191 119.932 104.917 1.00215.34 O ATOM 285 N GLN 36 73.200 121.176 103.323 1.00263.37 N ATOM 286 CA GLN 36 72.604 120.433 102.257 1.00263.37 C ATOM 287 CB GLN 36 71.965 121.293 101.151 1.00263.37 C ATOM 288 CG GLN 36 70.792 122.159 101.616 1.00263.37 C ATOM 289 CD GLN 36 71.340 123.513 102.043 1.00263.37 C ATOM 290 OE1 GLN 36 72.170 123.618 102.945 1.00263.37 O ATOM 291 NE2 GLN 36 70.862 124.590 101.366 1.00263.37 N ATOM 292 C GLN 36 73.727 119.699 101.619 1.00263.37 C ATOM 293 O GLN 36 74.882 120.108 101.727 1.00263.37 O ATOM 294 N LYS 37 73.427 118.573 100.950 1.00255.15 N ATOM 295 CA LYS 37 74.494 117.856 100.327 1.00255.15 C ATOM 296 CB LYS 37 74.123 116.440 99.861 1.00255.15 C ATOM 297 CG LYS 37 75.297 115.705 99.214 1.00255.15 C ATOM 298 CD LYS 37 75.098 114.193 99.120 1.00255.15 C ATOM 299 CE LYS 37 75.153 113.499 100.483 1.00255.15 C ATOM 300 NZ LYS 37 76.477 113.717 101.108 1.00255.15 N ATOM 301 C LYS 37 74.911 118.642 99.134 1.00255.15 C ATOM 302 O LYS 37 74.121 119.362 98.526 1.00255.15 O ATOM 303 N PRO 38 76.166 118.537 98.815 1.00230.14 N ATOM 304 CA PRO 38 76.682 119.255 97.690 1.00230.14 C ATOM 305 CD PRO 38 77.187 118.281 99.819 1.00230.14 C ATOM 306 CB PRO 38 78.200 119.099 97.762 1.00230.14 C ATOM 307 CG PRO 38 78.469 118.929 99.270 1.00230.14 C ATOM 308 C PRO 38 76.065 118.774 96.422 1.00230.14 C ATOM 309 O PRO 38 75.983 119.552 95.473 1.00230.14 O ATOM 310 N VAL 39 75.642 117.499 96.360 1.00 94.74 N ATOM 311 CA VAL 39 75.033 117.067 95.144 1.00 94.74 C ATOM 312 CB VAL 39 75.984 116.411 94.188 1.00 94.74 C ATOM 313 CG1 VAL 39 76.486 115.100 94.821 1.00 94.74 C ATOM 314 CG2 VAL 39 75.260 116.212 92.846 1.00 94.74 C ATOM 315 C VAL 39 73.994 116.051 95.463 1.00 94.74 C ATOM 316 O VAL 39 74.126 115.275 96.408 1.00 94.74 O ATOM 317 N VAL 40 72.906 116.063 94.674 1.00102.20 N ATOM 318 CA VAL 40 71.881 115.071 94.782 1.00102.20 C ATOM 319 CB VAL 40 70.562 115.606 95.261 1.00102.20 C ATOM 320 CG1 VAL 40 70.032 116.609 94.223 1.00102.20 C ATOM 321 CG2 VAL 40 69.624 114.415 95.514 1.00102.20 C ATOM 322 C VAL 40 71.695 114.608 93.381 1.00102.20 C ATOM 323 O VAL 40 71.770 115.414 92.453 1.00102.20 O ATOM 324 N SER 41 71.471 113.302 93.162 1.00206.48 N ATOM 325 CA SER 41 71.360 112.929 91.786 1.00206.48 C ATOM 326 CB SER 41 72.719 112.638 91.128 1.00206.48 C ATOM 327 OG SER 41 72.536 112.281 89.766 1.00206.48 O ATOM 328 C SER 41 70.547 111.690 91.657 1.00206.48 C ATOM 329 O SER 41 70.304 110.969 92.624 1.00206.48 O ATOM 330 N GLN 42 70.089 111.442 90.417 1.00273.45 N ATOM 331 CA GLN 42 69.364 110.261 90.068 1.00273.45 C ATOM 332 CB GLN 42 68.145 110.541 89.169 1.00273.45 C ATOM 333 CG GLN 42 67.397 109.282 88.722 1.00273.45 C ATOM 334 CD GLN 42 66.645 108.704 89.911 1.00273.45 C ATOM 335 OE1 GLN 42 66.446 109.363 90.932 1.00273.45 O ATOM 336 NE2 GLN 42 66.204 107.425 89.773 1.00273.45 N ATOM 337 C GLN 42 70.331 109.451 89.272 1.00273.45 C ATOM 338 O GLN 42 71.082 109.992 88.462 1.00273.45 O ATOM 339 N PRO 43 70.360 108.172 89.495 1.00171.24 N ATOM 340 CA PRO 43 71.291 107.382 88.747 1.00171.24 C ATOM 341 CD PRO 43 70.152 107.642 90.834 1.00171.24 C ATOM 342 CB PRO 43 71.409 106.054 89.490 1.00171.24 C ATOM 343 CG PRO 43 71.095 106.433 90.950 1.00171.24 C ATOM 344 C PRO 43 70.830 107.261 87.337 1.00171.24 C ATOM 345 O PRO 43 69.622 107.245 87.105 1.00171.24 O ATOM 346 N ASP 44 71.768 107.191 86.377 1.00136.39 N ATOM 347 CA ASP 44 71.356 107.040 85.018 1.00136.39 C ATOM 348 CB ASP 44 71.935 108.108 84.073 1.00136.39 C ATOM 349 CG ASP 44 71.327 109.460 84.419 1.00136.39 C ATOM 350 OD1 ASP 44 70.348 109.492 85.211 1.00136.39 O ATOM 351 OD2 ASP 44 71.842 110.483 83.892 1.00136.39 O ATOM 352 C ASP 44 71.907 105.737 84.554 1.00136.39 C ATOM 353 O ASP 44 73.065 105.663 84.148 1.00136.39 O ATOM 354 N PHE 45 71.103 104.658 84.615 1.00235.38 N ATOM 355 CA PHE 45 71.631 103.430 84.108 1.00235.38 C ATOM 356 CB PHE 45 71.186 102.172 84.878 1.00235.38 C ATOM 357 CG PHE 45 71.863 102.191 86.204 1.00235.38 C ATOM 358 CD1 PHE 45 73.099 101.608 86.358 1.00235.38 C ATOM 359 CD2 PHE 45 71.274 102.797 87.290 1.00235.38 C ATOM 360 CE1 PHE 45 73.737 101.620 87.576 1.00235.38 C ATOM 361 CE2 PHE 45 71.906 102.813 88.512 1.00235.38 C ATOM 362 CZ PHE 45 73.140 102.223 88.657 1.00235.38 C ATOM 363 C PHE 45 71.149 103.306 82.704 1.00235.38 C ATOM 364 O PHE 45 70.036 102.848 82.447 1.00235.38 O ATOM 365 N ARG 46 71.997 103.734 81.752 1.00317.85 N ATOM 366 CA ARG 46 71.662 103.652 80.365 1.00317.85 C ATOM 367 CB ARG 46 71.192 104.991 79.773 1.00317.85 C ATOM 368 CG ARG 46 72.219 106.115 79.905 1.00317.85 C ATOM 369 CD ARG 46 71.676 107.479 79.474 1.00317.85 C ATOM 370 NE ARG 46 72.759 108.483 79.667 1.00317.85 N ATOM 371 CZ ARG 46 72.584 109.761 79.219 1.00317.85 C ATOM 372 NH1 ARG 46 71.430 110.108 78.578 1.00317.85 N ATOM 373 NH2 ARG 46 73.564 110.693 79.412 1.00317.85 N ATOM 374 C ARG 46 72.910 103.249 79.662 1.00317.85 C ATOM 375 O ARG 46 74.008 103.616 80.076 1.00317.85 O ATOM 376 N ARG 47 72.775 102.454 78.587 1.00323.67 N ATOM 377 CA ARG 47 73.949 102.013 77.899 1.00323.67 C ATOM 378 CB ARG 47 74.418 100.630 78.370 1.00323.67 C ATOM 379 CG ARG 47 73.338 99.567 78.162 1.00323.67 C ATOM 380 CD ARG 47 73.654 98.211 78.791 1.00323.67 C ATOM 381 NE ARG 47 72.466 97.339 78.563 1.00323.67 N ATOM 382 CZ ARG 47 72.323 96.183 79.273 1.00323.67 C ATOM 383 NH1 ARG 47 73.283 95.811 80.170 1.00323.67 N ATOM 384 NH2 ARG 47 71.223 95.396 79.085 1.00323.67 N ATOM 385 C ARG 47 73.603 101.855 76.459 1.00323.67 C ATOM 386 O ARG 47 72.464 101.548 76.114 1.00323.67 O ATOM 387 N GLN 48 74.589 102.089 75.574 1.00221.21 N ATOM 388 CA GLN 48 74.351 101.842 74.186 1.00221.21 C ATOM 389 CB GLN 48 74.666 103.050 73.288 1.00221.21 C ATOM 390 CG GLN 48 74.256 102.848 71.829 1.00221.21 C ATOM 391 CD GLN 48 74.506 104.152 71.087 1.00221.21 C ATOM 392 OE1 GLN 48 73.912 104.408 70.041 1.00221.21 O ATOM 393 NE2 GLN 48 75.408 105.005 71.642 1.00221.21 N ATOM 394 C GLN 48 75.286 100.736 73.831 1.00221.21 C ATOM 395 O GLN 48 76.455 100.957 73.517 1.00221.21 O ATOM 396 N PRO 49 74.774 99.541 73.871 1.00 74.79 N ATOM 397 CA PRO 49 75.567 98.365 73.658 1.00 74.79 C ATOM 398 CD PRO 49 73.362 99.297 73.630 1.00 74.79 C ATOM 399 CB PRO 49 74.581 97.203 73.724 1.00 74.79 C ATOM 400 CG PRO 49 73.284 97.828 73.178 1.00 74.79 C ATOM 401 C PRO 49 76.219 98.421 72.321 1.00 74.79 C ATOM 402 O PRO 49 75.632 98.967 71.387 1.00 74.79 O ATOM 403 N VAL 50 77.445 97.877 72.215 1.00 37.34 N ATOM 404 CA VAL 50 78.100 97.818 70.947 1.00 37.34 C ATOM 405 CB VAL 50 79.593 97.701 71.051 1.00 37.34 C ATOM 406 CG1 VAL 50 80.173 97.521 69.640 1.00 37.34 C ATOM 407 CG2 VAL 50 80.124 98.939 71.793 1.00 37.34 C ATOM 408 C VAL 50 77.588 96.574 70.313 1.00 37.34 C ATOM 409 O VAL 50 77.430 95.551 70.977 1.00 37.34 O ATOM 410 N SER 51 77.288 96.630 69.004 1.00154.55 N ATOM 411 CA SER 51 76.748 95.458 68.392 1.00154.55 C ATOM 412 CB SER 51 75.424 95.706 67.649 1.00154.55 C ATOM 413 OG SER 51 74.425 96.140 68.558 1.00154.55 O ATOM 414 C SER 51 77.720 94.971 67.378 1.00154.55 C ATOM 415 O SER 51 78.377 95.756 66.695 1.00154.55 O ATOM 416 N GLU 52 77.842 93.636 67.276 1.00295.75 N ATOM 417 CA GLU 52 78.694 93.046 66.294 1.00295.75 C ATOM 418 CB GLU 52 79.612 91.945 66.854 1.00295.75 C ATOM 419 CG GLU 52 80.638 91.421 65.845 1.00295.75 C ATOM 420 CD GLU 52 79.978 90.363 64.973 1.00295.75 C ATOM 421 OE1 GLU 52 78.861 89.901 65.332 1.00295.75 O ATOM 422 OE2 GLU 52 80.591 89.997 63.935 1.00295.75 O ATOM 423 C GLU 52 77.758 92.420 65.320 1.00295.75 C ATOM 424 O GLU 52 76.683 91.962 65.704 1.00295.75 O ATOM 425 N THR 53 78.124 92.396 64.026 1.00184.30 N ATOM 426 CA THR 53 77.193 91.848 63.089 1.00184.30 C ATOM 427 CB THR 53 77.294 92.455 61.721 1.00184.30 C ATOM 428 OG1 THR 53 77.071 93.855 61.790 1.00184.30 O ATOM 429 CG2 THR 53 76.242 91.793 60.815 1.00184.30 C ATOM 430 C THR 53 77.480 90.394 62.942 1.00184.30 C ATOM 431 O THR 53 78.426 89.999 62.263 1.00184.30 O ATOM 432 N MET 54 76.657 89.558 63.602 1.00356.61 N ATOM 433 CA MET 54 76.805 88.142 63.479 1.00356.61 C ATOM 434 CB MET 54 77.740 87.515 64.526 1.00356.61 C ATOM 435 CG MET 54 77.986 86.024 64.292 1.00356.61 C ATOM 436 SD MET 54 79.128 85.254 65.476 1.00356.61 S ATOM 437 CE MET 54 80.618 85.979 64.730 1.00356.61 C ATOM 438 C MET 54 75.447 87.563 63.684 1.00356.61 C ATOM 439 O MET 54 74.609 88.149 64.368 1.00356.61 O ATOM 440 N GLN 55 75.176 86.398 63.071 1.00291.61 N ATOM 441 CA GLN 55 73.873 85.836 63.240 1.00291.61 C ATOM 442 CB GLN 55 72.990 85.985 61.990 1.00291.61 C ATOM 443 CG GLN 55 73.542 85.260 60.762 1.00291.61 C ATOM 444 CD GLN 55 72.570 85.496 59.615 1.00291.61 C ATOM 445 OE1 GLN 55 71.545 86.153 59.786 1.00291.61 O ATOM 446 NE2 GLN 55 72.895 84.947 58.414 1.00291.61 N ATOM 447 C GLN 55 74.016 84.381 63.530 1.00291.61 C ATOM 448 O GLN 55 74.869 83.700 62.963 1.00291.61 O ATOM 449 N VAL 56 73.183 83.875 64.460 1.00137.21 N ATOM 450 CA VAL 56 73.195 82.477 64.763 1.00137.21 C ATOM 451 CB VAL 56 73.430 82.172 66.219 1.00137.21 C ATOM 452 CG1 VAL 56 74.846 82.645 66.590 1.00137.21 C ATOM 453 CG2 VAL 56 72.325 82.836 67.061 1.00137.21 C ATOM 454 C VAL 56 71.841 81.973 64.397 1.00137.21 C ATOM 455 O VAL 56 70.827 82.553 64.782 1.00137.21 O ATOM 456 N TYR 57 71.787 80.892 63.599 1.00251.07 N ATOM 457 CA TYR 57 70.503 80.395 63.222 1.00251.07 C ATOM 458 CB TYR 57 70.248 80.540 61.711 1.00251.07 C ATOM 459 CG TYR 57 68.877 80.061 61.381 1.00251.07 C ATOM 460 CD1 TYR 57 67.785 80.867 61.606 1.00251.07 C ATOM 461 CD2 TYR 57 68.684 78.816 60.829 1.00251.07 C ATOM 462 CE1 TYR 57 66.517 80.436 61.296 1.00251.07 C ATOM 463 CE2 TYR 57 67.418 78.380 60.515 1.00251.07 C ATOM 464 CZ TYR 57 66.332 79.189 60.749 1.00251.07 C ATOM 465 OH TYR 57 65.034 78.739 60.427 1.00251.07 O ATOM 466 C TYR 57 70.481 78.943 63.559 1.00251.07 C ATOM 467 O TYR 57 71.308 78.175 63.070 1.00251.07 O ATOM 468 N LEU 58 69.540 78.531 64.426 1.00255.62 N ATOM 469 CA LEU 58 69.435 77.136 64.731 1.00255.62 C ATOM 470 CB LEU 58 69.459 76.831 66.245 1.00255.62 C ATOM 471 CG LEU 58 69.594 75.336 66.628 1.00255.62 C ATOM 472 CD1 LEU 58 69.609 75.166 68.156 1.00255.62 C ATOM 473 CD2 LEU 58 68.532 74.451 65.959 1.00255.62 C ATOM 474 C LEU 58 68.117 76.746 64.166 1.00255.62 C ATOM 475 O LEU 58 67.122 77.442 64.360 1.00255.62 O ATOM 476 N LYS 59 68.067 75.626 63.429 1.00211.98 N ATOM 477 CA LYS 59 66.821 75.295 62.813 1.00211.98 C ATOM 478 CB LYS 59 66.942 74.251 61.688 1.00211.98 C ATOM 479 CG LYS 59 67.674 74.775 60.449 1.00211.98 C ATOM 480 CD LYS 59 68.076 73.682 59.455 1.00211.98 C ATOM 481 CE LYS 59 69.383 72.970 59.809 1.00211.98 C ATOM 482 NZ LYS 59 69.137 71.952 60.853 1.00211.98 N ATOM 483 C LYS 59 65.888 74.742 63.837 1.00211.98 C ATOM 484 O LYS 59 66.169 73.730 64.476 1.00211.98 O ATOM 485 N GLN 60 64.746 75.430 64.026 1.00226.20 N ATOM 486 CA GLN 60 63.715 74.935 64.885 1.00226.20 C ATOM 487 CB GLN 60 63.517 75.722 66.193 1.00226.20 C ATOM 488 CG GLN 60 64.647 75.577 67.209 1.00226.20 C ATOM 489 CD GLN 60 64.223 76.333 68.462 1.00226.20 C ATOM 490 OE1 GLN 60 63.269 77.111 68.438 1.00226.20 O ATOM 491 NE2 GLN 60 64.943 76.099 69.591 1.00226.20 N ATOM 492 C GLN 60 62.449 75.116 64.123 1.00226.20 C ATOM 493 O GLN 60 62.073 76.239 63.792 1.00226.20 O ATOM 494 N ALA 61 61.758 74.010 63.799 1.00314.65 N ATOM 495 CA ALA 61 60.526 74.191 63.099 1.00314.65 C ATOM 496 CB ALA 61 60.695 74.845 61.717 1.00314.65 C ATOM 497 C ALA 61 59.916 72.851 62.886 1.00314.65 C ATOM 498 O ALA 61 60.600 71.831 62.883 1.00314.65 O ATOM 499 N ALA 62 58.580 72.833 62.727 1.00294.87 N ATOM 500 CA ALA 62 57.891 71.612 62.450 1.00294.87 C ATOM 501 CB ALA 62 57.457 70.851 63.713 1.00294.87 C ATOM 502 C ALA 62 56.655 72.005 61.721 1.00294.87 C ATOM 503 O ALA 62 56.105 73.080 61.954 1.00294.87 O ATOM 504 N ASP 63 56.191 71.148 60.795 1.00166.24 N ATOM 505 CA ASP 63 54.995 71.486 60.090 1.00166.24 C ATOM 506 CB ASP 63 55.148 71.467 58.560 1.00166.24 C ATOM 507 CG ASP 63 55.990 72.668 58.153 1.00166.24 C ATOM 508 OD1 ASP 63 56.594 73.306 59.057 1.00166.24 O ATOM 509 OD2 ASP 63 56.042 72.964 56.930 1.00166.24 O ATOM 510 C ASP 63 53.965 70.472 60.451 1.00166.24 C ATOM 511 O ASP 63 54.068 69.300 60.090 1.00166.24 O ATOM 512 N PRO 64 52.979 70.895 61.187 1.00 84.10 N ATOM 513 CA PRO 64 51.912 70.002 61.530 1.00 84.10 C ATOM 514 CD PRO 64 53.172 71.923 62.194 1.00 84.10 C ATOM 515 CB PRO 64 51.235 70.594 62.768 1.00 84.10 C ATOM 516 CG PRO 64 51.801 72.023 62.880 1.00 84.10 C ATOM 517 C PRO 64 51.024 69.892 60.339 1.00 84.10 C ATOM 518 O PRO 64 51.042 70.797 59.505 1.00 84.10 O ATOM 519 N GLY 65 50.259 68.793 60.218 1.00111.09 N ATOM 520 CA GLY 65 49.380 68.675 59.094 1.00111.09 C ATOM 521 C GLY 65 48.791 67.306 59.133 1.00111.09 C ATOM 522 O GLY 65 49.352 66.390 59.732 1.00111.09 O ATOM 523 N ARG 66 47.623 67.142 58.485 1.00294.57 N ATOM 524 CA ARG 66 46.989 65.862 58.450 1.00294.57 C ATOM 525 CB ARG 66 45.866 65.711 59.488 1.00294.57 C ATOM 526 CG ARG 66 44.760 66.748 59.298 1.00294.57 C ATOM 527 CD ARG 66 43.625 66.637 60.313 1.00294.57 C ATOM 528 NE ARG 66 42.645 67.710 59.989 1.00294.57 N ATOM 529 CZ ARG 66 41.460 67.784 60.660 1.00294.57 C ATOM 530 NH1 ARG 66 41.170 66.871 61.632 1.00294.57 N ATOM 531 NH2 ARG 66 40.562 68.765 60.352 1.00294.57 N ATOM 532 C ARG 66 46.353 65.734 57.109 1.00294.57 C ATOM 533 O ARG 66 45.998 66.729 56.478 1.00294.57 O ATOM 534 N ASP 67 46.214 64.488 56.625 1.00203.23 N ATOM 535 CA ASP 67 45.567 64.290 55.365 1.00203.23 C ATOM 536 CB ASP 67 46.364 63.424 54.376 1.00203.23 C ATOM 537 CG ASP 67 45.609 63.438 53.055 1.00203.23 C ATOM 538 OD1 ASP 67 44.696 64.294 52.910 1.00203.23 O ATOM 539 OD2 ASP 67 45.937 62.599 52.173 1.00203.23 O ATOM 540 C ASP 67 44.295 63.562 55.644 1.00203.23 C ATOM 541 O ASP 67 44.303 62.492 56.251 1.00203.23 O ATOM 542 N VAL 68 43.155 64.137 55.222 1.00105.23 N ATOM 543 CA VAL 68 41.916 63.457 55.444 1.00105.23 C ATOM 544 CB VAL 68 40.835 64.321 56.028 1.00105.23 C ATOM 545 CG1 VAL 68 40.460 65.409 55.008 1.00105.23 C ATOM 546 CG2 VAL 68 39.660 63.414 56.427 1.00105.23 C ATOM 547 C VAL 68 41.444 62.997 54.111 1.00105.23 C ATOM 548 O VAL 68 41.624 63.686 53.109 1.00105.23 O ATOM 549 N GLY 69 40.839 61.798 54.061 1.00119.30 N ATOM 550 CA GLY 69 40.386 61.304 52.799 1.00119.30 C ATOM 551 C GLY 69 39.215 60.421 53.055 1.00119.30 C ATOM 552 O GLY 69 39.012 59.930 54.164 1.00119.30 O ATOM 553 N LEU 70 38.412 60.194 52.002 1.00253.09 N ATOM 554 CA LEU 70 37.257 59.363 52.116 1.00253.09 C ATOM 555 CB LEU 70 36.034 59.924 51.369 1.00253.09 C ATOM 556 CG LEU 70 35.561 61.294 51.889 1.00253.09 C ATOM 557 CD1 LEU 70 36.640 62.373 51.695 1.00253.09 C ATOM 558 CD2 LEU 70 34.215 61.690 51.263 1.00253.09 C ATOM 559 C LEU 70 37.618 58.070 51.469 1.00253.09 C ATOM 560 O LEU 70 38.536 58.008 50.652 1.00253.09 O ATOM 561 N TYR 71 36.924 56.983 51.844 1.00274.68 N ATOM 562 CA TYR 71 37.241 55.731 51.229 1.00274.68 C ATOM 563 CB TYR 71 37.456 54.604 52.254 1.00274.68 C ATOM 564 CG TYR 71 37.815 53.349 51.537 1.00274.68 C ATOM 565 CD1 TYR 71 39.090 53.162 51.052 1.00274.68 C ATOM 566 CD2 TYR 71 36.882 52.354 51.361 1.00274.68 C ATOM 567 CE1 TYR 71 39.430 52.003 50.395 1.00274.68 C ATOM 568 CE2 TYR 71 37.215 51.193 50.705 1.00274.68 C ATOM 569 CZ TYR 71 38.490 51.017 50.220 1.00274.68 C ATOM 570 OH TYR 71 38.828 49.825 49.547 1.00274.68 O ATOM 571 C TYR 71 36.069 55.386 50.374 1.00274.68 C ATOM 572 O TYR 71 34.955 55.200 50.863 1.00274.68 O ATOM 573 N TRP 72 36.301 55.315 49.051 1.00313.35 N ATOM 574 CA TRP 72 35.244 55.026 48.131 1.00313.35 C ATOM 575 CB TRP 72 35.015 56.187 47.143 1.00313.35 C ATOM 576 CG TRP 72 33.871 56.036 46.169 1.00313.35 C ATOM 577 CD2 TRP 72 33.312 57.146 45.447 1.00313.35 C ATOM 578 CD1 TRP 72 33.162 54.933 45.795 1.00313.35 C ATOM 579 NE1 TRP 72 32.196 55.284 44.879 1.00313.35 N ATOM 580 CE2 TRP 72 32.276 56.644 44.658 1.00313.35 C ATOM 581 CE3 TRP 72 33.635 58.475 45.445 1.00313.35 C ATOM 582 CZ2 TRP 72 31.546 57.469 43.849 1.00313.35 C ATOM 583 CZ3 TRP 72 32.897 59.302 44.628 1.00313.35 C ATOM 584 CH2 TRP 72 31.873 58.808 43.847 1.00313.35 C ATOM 585 C TRP 72 35.695 53.820 47.377 1.00313.35 C ATOM 586 O TRP 72 36.888 53.644 47.140 1.00313.35 O ATOM 587 N MET 73 34.757 52.932 47.001 1.00290.99 N ATOM 588 CA MET 73 35.187 51.750 46.315 1.00290.99 C ATOM 589 CB MET 73 34.510 50.458 46.800 1.00290.99 C ATOM 590 CG MET 73 34.990 49.213 46.047 1.00290.99 C ATOM 591 SD MET 73 34.225 47.652 46.579 1.00290.99 S ATOM 592 CE MET 73 35.168 47.532 48.129 1.00290.99 C ATOM 593 C MET 73 34.843 51.887 44.874 1.00290.99 C ATOM 594 O MET 73 33.711 52.216 44.521 1.00290.99 O ATOM 595 N ALA 74 35.845 51.657 44.004 1.00222.08 N ATOM 596 CA ALA 74 35.604 51.700 42.596 1.00222.08 C ATOM 597 CB ALA 74 36.884 51.846 41.755 1.00222.08 C ATOM 598 C ALA 74 34.977 50.396 42.236 1.00222.08 C ATOM 599 O ALA 74 35.181 49.391 42.915 1.00222.08 O ATOM 600 N THR 75 34.176 50.384 41.155 1.00178.14 N ATOM 601 CA THR 75 33.560 49.161 40.739 1.00178.14 C ATOM 602 CB THR 75 32.092 49.315 40.465 1.00178.14 C ATOM 603 OG1 THR 75 31.424 49.750 41.640 1.00178.14 O ATOM 604 CG2 THR 75 31.519 47.971 39.988 1.00178.14 C ATOM 605 C THR 75 34.216 48.757 39.463 1.00178.14 C ATOM 606 O THR 75 34.213 49.508 38.488 1.00178.14 O ATOM 607 N ASP 76 34.826 47.555 39.443 1.00218.55 N ATOM 608 CA ASP 76 35.474 47.115 38.244 1.00218.55 C ATOM 609 CB ASP 76 37.010 47.084 38.352 1.00218.55 C ATOM 610 CG ASP 76 37.581 46.830 36.965 1.00218.55 C ATOM 611 OD1 ASP 76 36.777 46.577 36.028 1.00218.55 O ATOM 612 OD2 ASP 76 38.831 46.897 36.821 1.00218.55 O ATOM 613 C ASP 76 35.020 45.720 37.953 1.00218.55 C ATOM 614 O ASP 76 35.187 44.819 38.773 1.00218.55 O ATOM 615 N PHE 77 34.405 45.514 36.773 1.00246.84 N ATOM 616 CA PHE 77 33.996 44.194 36.394 1.00246.84 C ATOM 617 CB PHE 77 32.487 43.929 36.527 1.00246.84 C ATOM 618 CG PHE 77 32.145 43.902 37.977 1.00246.84 C ATOM 619 CD1 PHE 77 31.793 45.056 38.639 1.00246.84 C ATOM 620 CD2 PHE 77 32.177 42.720 38.682 1.00246.84 C ATOM 621 CE1 PHE 77 31.478 45.025 39.976 1.00246.84 C ATOM 622 CE2 PHE 77 31.863 42.685 40.020 1.00246.84 C ATOM 623 CZ PHE 77 31.508 43.841 40.672 1.00246.84 C ATOM 624 C PHE 77 34.339 44.031 34.951 1.00246.84 C ATOM 625 O PHE 77 34.519 45.013 34.234 1.00246.84 O ATOM 626 N GLU 78 34.465 42.771 34.491 1.00330.49 N ATOM 627 CA GLU 78 34.796 42.560 33.115 1.00330.49 C ATOM 628 CB GLU 78 36.251 42.105 32.892 1.00330.49 C ATOM 629 CG GLU 78 36.620 40.777 33.557 1.00330.49 C ATOM 630 CD GLU 78 36.360 39.646 32.571 1.00330.49 C ATOM 631 OE1 GLU 78 35.831 39.931 31.463 1.00330.49 O ATOM 632 OE2 GLU 78 36.698 38.480 32.910 1.00330.49 O ATOM 633 C GLU 78 33.879 41.518 32.561 1.00330.49 C ATOM 634 O GLU 78 33.335 40.689 33.292 1.00330.49 O ATOM 635 N ASN 79 33.670 41.567 31.232 1.00224.14 N ATOM 636 CA ASN 79 32.826 40.637 30.542 1.00224.14 C ATOM 637 CB ASN 79 31.391 41.149 30.315 1.00224.14 C ATOM 638 CG ASN 79 30.529 39.983 29.839 1.00224.14 C ATOM 639 OD1 ASN 79 30.412 38.963 30.518 1.00224.14 O ATOM 640 ND2 ASN 79 29.907 40.136 28.640 1.00224.14 N ATOM 641 C ASN 79 33.454 40.436 29.202 1.00224.14 C ATOM 642 O ASN 79 34.623 40.069 29.099 1.00224.14 O ATOM 643 N ARG 80 32.670 40.672 28.130 1.00280.23 N ATOM 644 CA ARG 80 33.162 40.526 26.793 1.00280.23 C ATOM 645 CB ARG 80 34.477 41.287 26.549 1.00280.23 C ATOM 646 CG ARG 80 34.358 42.806 26.675 1.00280.23 C ATOM 647 CD ARG 80 34.448 43.561 25.345 1.00280.23 C ATOM 648 NE ARG 80 33.119 43.481 24.675 1.00280.23 N ATOM 649 CZ ARG 80 32.954 42.721 23.553 1.00280.23 C ATOM 650 NH1 ARG 80 34.014 42.041 23.025 1.00280.23 N ATOM 651 NH2 ARG 80 31.732 42.655 22.947 1.00280.23 N ATOM 652 C ARG 80 33.437 39.082 26.550 1.00280.23 C ATOM 653 O ARG 80 34.182 38.729 25.637 1.00280.23 O ATOM 654 N ARG 81 32.828 38.200 27.360 1.00246.90 N ATOM 655 CA ARG 81 33.004 36.800 27.122 1.00246.90 C ATOM 656 CB ARG 81 33.144 35.953 28.399 1.00246.90 C ATOM 657 CG ARG 81 33.322 34.457 28.118 1.00246.90 C ATOM 658 CD ARG 81 33.450 33.597 29.379 1.00246.90 C ATOM 659 NE ARG 81 33.496 32.172 28.943 1.00246.90 N ATOM 660 CZ ARG 81 33.581 31.167 29.865 1.00246.90 C ATOM 661 NH1 ARG 81 33.640 31.460 31.197 1.00246.90 N ATOM 662 NH2 ARG 81 33.608 29.867 29.452 1.00246.90 N ATOM 663 C ARG 81 31.763 36.357 26.438 1.00246.90 C ATOM 664 O ARG 81 30.659 36.597 26.923 1.00246.90 O ATOM 665 N PHE 82 31.910 35.717 25.266 1.00209.83 N ATOM 666 CA PHE 82 30.734 35.282 24.585 1.00209.83 C ATOM 667 CB PHE 82 30.782 35.582 23.075 1.00209.83 C ATOM 668 CG PHE 82 29.467 35.247 22.455 1.00209.83 C ATOM 669 CD1 PHE 82 28.459 36.184 22.414 1.00209.83 C ATOM 670 CD2 PHE 82 29.240 34.005 21.908 1.00209.83 C ATOM 671 CE1 PHE 82 27.246 35.890 21.840 1.00209.83 C ATOM 672 CE2 PHE 82 28.027 33.704 21.331 1.00209.83 C ATOM 673 CZ PHE 82 27.028 34.646 21.297 1.00209.83 C ATOM 674 C PHE 82 30.682 33.801 24.739 1.00209.83 C ATOM 675 O PHE 82 31.440 33.074 24.100 1.00209.83 O ATOM 676 N PRO 83 29.822 33.332 25.593 1.00 91.54 N ATOM 677 CA PRO 83 29.657 31.917 25.700 1.00 91.54 C ATOM 678 CD PRO 83 29.550 34.002 26.853 1.00 91.54 C ATOM 679 CB PRO 83 29.039 31.650 27.076 1.00 91.54 C ATOM 680 CG PRO 83 28.605 33.037 27.583 1.00 91.54 C ATOM 681 C PRO 83 28.801 31.536 24.546 1.00 91.54 C ATOM 682 O PRO 83 28.043 32.382 24.074 1.00 91.54 O ATOM 683 N GLY 84 28.898 30.288 24.059 1.00112.18 N ATOM 684 CA GLY 84 28.068 29.953 22.948 1.00112.18 C ATOM 685 C GLY 84 27.686 28.523 23.083 1.00112.18 C ATOM 686 O GLY 84 28.502 27.673 23.435 1.00112.18 O ATOM 687 N LYS 85 26.406 28.232 22.800 1.00160.10 N ATOM 688 CA LYS 85 25.946 26.883 22.852 1.00160.10 C ATOM 689 CB LYS 85 24.748 26.709 23.799 1.00160.10 C ATOM 690 CG LYS 85 25.144 26.918 25.262 1.00160.10 C ATOM 691 CD LYS 85 23.974 27.221 26.198 1.00160.10 C ATOM 692 CE LYS 85 23.611 28.707 26.247 1.00160.10 C ATOM 693 NZ LYS 85 22.584 28.944 27.286 1.00160.10 N ATOM 694 C LYS 85 25.517 26.564 21.464 1.00160.10 C ATOM 695 O LYS 85 24.620 27.205 20.918 1.00160.10 O ATOM 696 N VAL 86 26.168 25.562 20.846 1.00 56.34 N ATOM 697 CA VAL 86 25.829 25.256 19.493 1.00 56.34 C ATOM 698 CB VAL 86 27.019 24.894 18.657 1.00 56.34 C ATOM 699 CG1 VAL 86 26.535 24.480 17.258 1.00 56.34 C ATOM 700 CG2 VAL 86 27.991 26.087 18.656 1.00 56.34 C ATOM 701 C VAL 86 24.929 24.073 19.517 1.00 56.34 C ATOM 702 O VAL 86 25.321 22.983 19.930 1.00 56.34 O ATOM 703 N SER 87 23.673 24.272 19.083 1.00102.11 N ATOM 704 CA SER 87 22.772 23.166 19.036 1.00102.11 C ATOM 705 CB SER 87 21.294 23.582 19.071 1.00102.11 C ATOM 706 OG SER 87 20.982 24.353 17.920 1.00102.11 O ATOM 707 C SER 87 23.020 22.483 17.737 1.00102.11 C ATOM 708 O SER 87 23.442 23.105 16.764 1.00102.11 O ATOM 709 N PRO 88 22.799 21.204 17.706 1.00 91.58 N ATOM 710 CA PRO 88 22.952 20.505 16.465 1.00 91.58 C ATOM 711 CD PRO 88 23.092 20.356 18.847 1.00 91.58 C ATOM 712 CB PRO 88 23.140 19.028 16.824 1.00 91.58 C ATOM 713 CG PRO 88 22.799 18.942 18.324 1.00 91.58 C ATOM 714 C PRO 88 21.753 20.799 15.630 1.00 91.58 C ATOM 715 O PRO 88 20.674 20.990 16.188 1.00 91.58 O ATOM 716 N SER 89 21.914 20.855 14.296 1.00187.58 N ATOM 717 CA SER 89 20.775 21.119 13.477 1.00187.58 C ATOM 718 CB SER 89 20.681 22.577 12.994 1.00187.58 C ATOM 719 OG SER 89 20.494 23.446 14.102 1.00187.58 O ATOM 720 C SER 89 20.894 20.257 12.270 1.00187.58 C ATOM 721 O SER 89 21.994 19.930 11.827 1.00187.58 O ATOM 722 N GLY 90 19.742 19.851 11.717 1.00126.08 N ATOM 723 CA GLY 90 19.749 19.049 10.534 1.00126.08 C ATOM 724 C GLY 90 18.348 19.058 10.034 1.00126.08 C ATOM 725 O GLY 90 17.402 19.146 10.815 1.00126.08 O ATOM 726 N PHE 91 18.174 18.963 8.704 1.00244.23 N ATOM 727 CA PHE 91 16.840 18.969 8.192 1.00244.23 C ATOM 728 CB PHE 91 16.600 19.996 7.074 1.00244.23 C ATOM 729 CG PHE 91 15.176 19.853 6.663 1.00244.23 C ATOM 730 CD1 PHE 91 14.175 20.473 7.373 1.00244.23 C ATOM 731 CD2 PHE 91 14.843 19.096 5.563 1.00244.23 C ATOM 732 CE1 PHE 91 12.862 20.338 6.987 1.00244.23 C ATOM 733 CE2 PHE 91 13.533 18.957 5.171 1.00244.23 C ATOM 734 CZ PHE 91 12.539 19.580 5.888 1.00244.23 C ATOM 735 C PHE 91 16.564 17.627 7.615 1.00244.23 C ATOM 736 O PHE 91 17.374 17.071 6.875 1.00244.23 O ATOM 737 N GLN 92 15.400 17.061 7.983 1.00224.58 N ATOM 738 CA GLN 92 14.986 15.799 7.459 1.00224.58 C ATOM 739 CB GLN 92 15.275 14.616 8.396 1.00224.58 C ATOM 740 CG GLN 92 16.763 14.382 8.658 1.00224.58 C ATOM 741 CD GLN 92 16.873 13.190 9.594 1.00224.58 C ATOM 742 OE1 GLN 92 15.880 12.522 9.879 1.00224.58 O ATOM 743 NE2 GLN 92 18.109 12.916 10.091 1.00224.58 N ATOM 744 C GLN 92 13.506 15.885 7.340 1.00224.58 C ATOM 745 O GLN 92 12.839 16.430 8.218 1.00224.58 O ATOM 746 N LYS 93 12.945 15.378 6.228 1.00275.24 N ATOM 747 CA LYS 93 11.520 15.414 6.144 1.00275.24 C ATOM 748 CB LYS 93 10.967 16.810 5.815 1.00275.24 C ATOM 749 CG LYS 93 9.477 16.972 6.119 1.00275.24 C ATOM 750 CD LYS 93 9.027 18.435 6.153 1.00275.24 C ATOM 751 CE LYS 93 7.903 18.714 7.153 1.00275.24 C ATOM 752 NZ LYS 93 6.673 17.999 6.751 1.00275.24 N ATOM 753 C LYS 93 11.110 14.480 5.058 1.00275.24 C ATOM 754 O LYS 93 11.698 14.467 3.977 1.00275.24 O ATOM 755 N LEU 94 10.093 13.646 5.335 1.00231.48 N ATOM 756 CA LEU 94 9.602 12.778 4.309 1.00231.48 C ATOM 757 CB LEU 94 9.379 11.326 4.766 1.00231.48 C ATOM 758 CG LEU 94 10.665 10.600 5.199 1.00231.48 C ATOM 759 CD1 LEU 94 11.274 11.241 6.455 1.00231.48 C ATOM 760 CD2 LEU 94 10.429 9.088 5.355 1.00231.48 C ATOM 761 C LEU 94 8.268 13.325 3.947 1.00231.48 C ATOM 762 O LEU 94 7.361 13.368 4.777 1.00231.48 O ATOM 763 N TYR 95 8.106 13.774 2.690 1.00241.15 N ATOM 764 CA TYR 95 6.826 14.318 2.364 1.00241.15 C ATOM 765 CB TYR 95 6.908 15.641 1.585 1.00241.15 C ATOM 766 CG TYR 95 5.522 16.167 1.444 1.00241.15 C ATOM 767 CD1 TYR 95 4.969 16.924 2.451 1.00241.15 C ATOM 768 CD2 TYR 95 4.776 15.906 0.319 1.00241.15 C ATOM 769 CE1 TYR 95 3.691 17.417 2.342 1.00241.15 C ATOM 770 CE2 TYR 95 3.496 16.397 0.204 1.00241.15 C ATOM 771 CZ TYR 95 2.951 17.152 1.215 1.00241.15 C ATOM 772 OH TYR 95 1.637 17.654 1.095 1.00241.15 O ATOM 773 C TYR 95 6.134 13.335 1.486 1.00241.15 C ATOM 774 O TYR 95 6.146 13.454 0.262 1.00241.15 O ATOM 775 N ARG 96 5.507 12.322 2.108 1.00341.54 N ATOM 776 CA ARG 96 4.745 11.370 1.365 1.00341.54 C ATOM 777 CB ARG 96 5.494 10.076 1.000 1.00341.54 C ATOM 778 CG ARG 96 5.911 9.249 2.217 1.00341.54 C ATOM 779 CD ARG 96 6.386 7.836 1.869 1.00341.54 C ATOM 780 NE ARG 96 6.644 7.125 3.152 1.00341.54 N ATOM 781 CZ ARG 96 5.607 6.538 3.818 1.00341.54 C ATOM 782 NH1 ARG 96 4.337 6.645 3.328 1.00341.54 N ATOM 783 NH2 ARG 96 5.840 5.838 4.967 1.00341.54 N ATOM 784 C ARG 96 3.653 10.965 2.288 1.00341.54 C ATOM 785 O ARG 96 3.819 10.988 3.506 1.00341.54 O ATOM 786 N GLN 97 2.489 10.596 1.735 1.00257.25 N ATOM 787 CA GLN 97 1.442 10.185 2.610 1.00257.25 C ATOM 788 CB GLN 97 0.098 10.869 2.318 1.00257.25 C ATOM 789 CG GLN 97 -1.000 10.517 3.320 1.00257.25 C ATOM 790 CD GLN 97 -2.216 11.359 2.967 1.00257.25 C ATOM 791 OE1 GLN 97 -2.415 11.719 1.809 1.00257.25 O ATOM 792 NE2 GLN 97 -3.045 11.696 3.992 1.00257.25 N ATOM 793 C GLN 97 1.282 8.721 2.395 1.00257.25 C ATOM 794 O GLN 97 1.335 8.246 1.262 1.00257.25 O ATOM 795 N TRP 98 1.105 7.956 3.487 1.00243.36 N ATOM 796 CA TRP 98 0.962 6.551 3.281 1.00243.36 C ATOM 797 CB TRP 98 1.247 5.699 4.529 1.00243.36 C ATOM 798 CG TRP 98 1.086 4.214 4.294 1.00243.36 C ATOM 799 CD2 TRP 98 0.987 3.241 5.344 1.00243.36 C ATOM 800 CD1 TRP 98 0.985 3.527 3.119 1.00243.36 C ATOM 801 NE1 TRP 98 0.831 2.184 3.373 1.00243.36 N ATOM 802 CE2 TRP 98 0.830 1.996 4.739 1.00243.36 C ATOM 803 CE3 TRP 98 1.025 3.375 6.702 1.00243.36 C ATOM 804 CZ2 TRP 98 0.708 0.860 5.489 1.00243.36 C ATOM 805 CZ3 TRP 98 0.900 2.229 7.456 1.00243.36 C ATOM 806 CH2 TRP 98 0.745 0.996 6.859 1.00243.36 C ATOM 807 C TRP 98 -0.458 6.322 2.920 1.00243.36 C ATOM 808 O TRP 98 -1.326 6.215 3.784 1.00243.36 O ATOM 809 N ARG 99 -0.727 6.242 1.607 1.00259.67 N ATOM 810 CA ARG 99 -2.066 5.987 1.185 1.00259.67 C ATOM 811 CB ARG 99 -2.695 7.142 0.389 1.00259.67 C ATOM 812 CG ARG 99 -4.176 6.925 0.073 1.00259.67 C ATOM 813 CD ARG 99 -5.042 6.815 1.329 1.00259.67 C ATOM 814 NE ARG 99 -6.467 6.764 0.899 1.00259.67 N ATOM 815 CZ ARG 99 -7.317 7.765 1.272 1.00259.67 C ATOM 816 NH1 ARG 99 -6.860 8.779 2.065 1.00259.67 N ATOM 817 NH2 ARG 99 -8.620 7.750 0.864 1.00259.67 N ATOM 818 C ARG 99 -1.990 4.812 0.281 1.00259.67 C ATOM 819 O ARG 99 -1.096 4.722 -0.559 1.00259.67 O ATOM 820 N ASN 100 -2.924 3.862 0.444 1.00228.51 N ATOM 821 CA ASN 100 -2.889 2.727 -0.419 1.00228.51 C ATOM 822 CB ASN 100 -3.732 1.549 0.096 1.00228.51 C ATOM 823 CG ASN 100 -5.179 2.013 0.195 1.00228.51 C ATOM 824 OD1 ASN 100 -5.460 3.082 0.733 1.00228.51 O ATOM 825 ND2 ASN 100 -6.120 1.194 -0.348 1.00228.51 N ATOM 826 C ASN 100 -3.444 3.162 -1.734 1.00228.51 C ATOM 827 O ASN 100 -4.511 3.772 -1.801 1.00228.51 O ATOM 828 N GLN 101 -2.705 2.883 -2.821 1.00255.62 N ATOM 829 CA GLN 101 -3.202 3.213 -4.121 1.00255.62 C ATOM 830 CB GLN 101 -2.346 4.242 -4.882 1.00255.62 C ATOM 831 CG GLN 101 -2.436 5.655 -4.301 1.00255.62 C ATOM 832 CD GLN 101 -3.811 6.214 -4.648 1.00255.62 C ATOM 833 OE1 GLN 101 -4.274 7.174 -4.034 1.00255.62 O ATOM 834 NE2 GLN 101 -4.484 5.600 -5.659 1.00255.62 N ATOM 835 C GLN 101 -3.181 1.949 -4.905 1.00255.62 C ATOM 836 O GLN 101 -2.155 1.275 -4.987 1.00255.62 O ATOM 837 N THR 102 -4.331 1.582 -5.495 1.00284.51 N ATOM 838 CA THR 102 -4.348 0.372 -6.254 1.00284.51 C ATOM 839 CB THR 102 -5.221 -0.701 -5.675 1.00284.51 C ATOM 840 OG1 THR 102 -5.007 -1.929 -6.356 1.00284.51 O ATOM 841 CG2 THR 102 -6.689 -0.265 -5.814 1.00284.51 C ATOM 842 C THR 102 -4.887 0.686 -7.607 1.00284.51 C ATOM 843 O THR 102 -5.774 1.521 -7.768 1.00284.51 O ATOM 844 N GLY 103 -4.323 0.013 -8.624 1.00120.16 N ATOM 845 CA GLY 103 -4.755 0.155 -9.979 1.00120.16 C ATOM 846 C GLY 103 -3.765 -0.617 -10.775 1.00120.16 C ATOM 847 O GLY 103 -2.564 -0.372 -10.687 1.00120.16 O ATOM 848 N TRP 104 -4.241 -1.580 -11.583 1.00219.18 N ATOM 849 CA TRP 104 -3.299 -2.347 -12.333 1.00219.18 C ATOM 850 CB TRP 104 -3.533 -3.864 -12.214 1.00219.18 C ATOM 851 CG TRP 104 -2.556 -4.724 -12.981 1.00219.18 C ATOM 852 CD2 TRP 104 -2.871 -5.423 -14.195 1.00219.18 C ATOM 853 CD1 TRP 104 -1.262 -5.035 -12.684 1.00219.18 C ATOM 854 NE1 TRP 104 -0.750 -5.881 -13.637 1.00219.18 N ATOM 855 CE2 TRP 104 -1.730 -6.129 -14.574 1.00219.18 C ATOM 856 CE3 TRP 104 -4.020 -5.474 -14.931 1.00219.18 C ATOM 857 CZ2 TRP 104 -1.721 -6.900 -15.701 1.00219.18 C ATOM 858 CZ3 TRP 104 -4.005 -6.252 -16.069 1.00219.18 C ATOM 859 CH2 TRP 104 -2.878 -6.950 -16.446 1.00219.18 C ATOM 860 C TRP 104 -3.452 -1.957 -13.760 1.00219.18 C ATOM 861 O TRP 104 -4.485 -2.210 -14.376 1.00219.18 O ATOM 862 N ASP 105 -2.420 -1.300 -14.316 1.00167.69 N ATOM 863 CA ASP 105 -2.486 -0.901 -15.688 1.00167.69 C ATOM 864 CB ASP 105 -2.244 0.604 -15.903 1.00167.69 C ATOM 865 CG ASP 105 -3.399 1.378 -15.283 1.00167.69 C ATOM 866 OD1 ASP 105 -4.315 0.724 -14.717 1.00167.69 O ATOM 867 OD2 ASP 105 -3.380 2.635 -15.363 1.00167.69 O ATOM 868 C ASP 105 -1.379 -1.609 -16.389 1.00167.69 C ATOM 869 O ASP 105 -0.271 -1.087 -16.496 1.00167.69 O ATOM 870 N ALA 106 -1.638 -2.834 -16.877 1.00279.74 N ATOM 871 CA ALA 106 -0.586 -3.503 -17.579 1.00279.74 C ATOM 872 CB ALA 106 0.262 -4.422 -16.683 1.00279.74 C ATOM 873 C ALA 106 -1.209 -4.359 -18.627 1.00279.74 C ATOM 874 O ALA 106 -2.297 -4.902 -18.441 1.00279.74 O ATOM 875 N TYR 107 -0.533 -4.467 -19.786 1.00227.11 N ATOM 876 CA TYR 107 -0.999 -5.334 -20.824 1.00227.11 C ATOM 877 CB TYR 107 -1.516 -4.603 -22.077 1.00227.11 C ATOM 878 CG TYR 107 -2.822 -3.981 -21.726 1.00227.11 C ATOM 879 CD1 TYR 107 -2.878 -2.795 -21.031 1.00227.11 C ATOM 880 CD2 TYR 107 -3.999 -4.589 -22.102 1.00227.11 C ATOM 881 CE1 TYR 107 -4.090 -2.228 -20.713 1.00227.11 C ATOM 882 CE2 TYR 107 -5.213 -4.027 -21.786 1.00227.11 C ATOM 883 CZ TYR 107 -5.259 -2.844 -21.090 1.00227.11 C ATOM 884 OH TYR 107 -6.502 -2.263 -20.763 1.00227.11 O ATOM 885 C TYR 107 0.170 -6.164 -21.230 1.00227.11 C ATOM 886 O TYR 107 1.271 -5.648 -21.420 1.00227.11 O ATOM 887 N VAL 108 -0.033 -7.488 -21.346 1.00 71.25 N ATOM 888 CA VAL 108 1.059 -8.317 -21.746 1.00 71.25 C ATOM 889 CB VAL 108 1.357 -9.417 -20.766 1.00 71.25 C ATOM 890 CG1 VAL 108 2.481 -10.302 -21.331 1.00 71.25 C ATOM 891 CG2 VAL 108 1.687 -8.777 -19.408 1.00 71.25 C ATOM 892 C VAL 108 0.670 -8.955 -23.034 1.00 71.25 C ATOM 893 O VAL 108 -0.395 -9.559 -23.145 1.00 71.25 O ATOM 894 N GLN 109 1.529 -8.816 -24.059 1.00261.76 N ATOM 895 CA GLN 109 1.213 -9.432 -25.308 1.00261.76 C ATOM 896 CB GLN 109 0.881 -8.428 -26.421 1.00261.76 C ATOM 897 CG GLN 109 0.484 -9.091 -27.742 1.00261.76 C ATOM 898 CD GLN 109 -0.936 -9.621 -27.596 1.00261.76 C ATOM 899 OE1 GLN 109 -1.236 -10.400 -26.693 1.00261.76 O ATOM 900 NE2 GLN 109 -1.841 -9.178 -28.510 1.00261.76 N ATOM 901 C GLN 109 2.421 -10.192 -25.737 1.00261.76 C ATOM 902 O GLN 109 3.538 -9.676 -25.702 1.00261.76 O ATOM 903 N SER 110 2.226 -11.463 -26.126 1.00162.31 N ATOM 904 CA SER 110 3.332 -12.247 -26.585 1.00162.31 C ATOM 905 CB SER 110 3.999 -13.081 -25.477 1.00162.31 C ATOM 906 OG SER 110 3.077 -14.030 -24.961 1.00162.31 O ATOM 907 C SER 110 2.785 -13.203 -27.589 1.00162.31 C ATOM 908 O SER 110 1.604 -13.538 -27.553 1.00162.31 O ATOM 909 N CYS 111 3.630 -13.649 -28.538 1.00105.92 N ATOM 910 CA CYS 111 3.145 -14.592 -29.498 1.00105.92 C ATOM 911 CB CYS 111 3.285 -14.124 -30.957 1.00105.92 C ATOM 912 SG CYS 111 2.656 -15.343 -32.152 1.00105.92 S ATOM 913 C CYS 111 3.950 -15.837 -29.353 1.00105.92 C ATOM 914 O CYS 111 5.100 -15.898 -29.785 1.00105.92 O ATOM 915 N ARG 112 3.365 -16.866 -28.715 1.00265.66 N ATOM 916 CA ARG 112 4.057 -18.112 -28.609 1.00265.66 C ATOM 917 CB ARG 112 4.306 -18.575 -27.161 1.00265.66 C ATOM 918 CG ARG 112 3.025 -18.750 -26.343 1.00265.66 C ATOM 919 CD ARG 112 3.239 -19.466 -25.008 1.00265.66 C ATOM 920 NE ARG 112 3.537 -20.893 -25.316 1.00265.66 N ATOM 921 CZ ARG 112 3.711 -21.794 -24.304 1.00265.66 C ATOM 922 NH1 ARG 112 3.619 -21.390 -23.004 1.00265.66 N ATOM 923 NH2 ARG 112 3.973 -23.102 -24.593 1.00265.66 N ATOM 924 C ARG 112 3.174 -19.125 -29.248 1.00265.66 C ATOM 925 O ARG 112 2.028 -19.305 -28.840 1.00265.66 O ATOM 926 N ALA 113 3.675 -19.808 -30.292 1.00200.84 N ATOM 927 CA ALA 113 2.832 -20.786 -30.903 1.00200.84 C ATOM 928 CB ALA 113 2.430 -20.431 -32.345 1.00200.84 C ATOM 929 C ALA 113 3.592 -22.063 -30.967 1.00200.84 C ATOM 930 O ALA 113 4.703 -22.113 -31.491 1.00200.84 O ATOM 931 N ILE 114 3.010 -23.138 -30.409 1.00 77.28 N ATOM 932 CA ILE 114 3.649 -24.410 -30.512 1.00 77.28 C ATOM 933 CB ILE 114 4.005 -25.001 -29.181 1.00 77.28 C ATOM 934 CG2 ILE 114 4.471 -26.449 -29.400 1.00 77.28 C ATOM 935 CG1 ILE 114 5.041 -24.111 -28.477 1.00 77.28 C ATOM 936 CD1 ILE 114 5.251 -24.470 -27.007 1.00 77.28 C ATOM 937 C ILE 114 2.655 -25.310 -31.155 1.00 77.28 C ATOM 938 O ILE 114 1.666 -25.697 -30.537 1.00 77.28 O ATOM 939 N TRP 115 2.885 -25.653 -32.434 1.00162.97 N ATOM 940 CA TRP 115 1.963 -26.538 -33.072 1.00162.97 C ATOM 941 CB TRP 115 1.226 -25.912 -34.269 1.00162.97 C ATOM 942 CG TRP 115 0.259 -24.806 -33.923 1.00162.97 C ATOM 943 CD2 TRP 115 -1.122 -25.017 -33.593 1.00162.97 C ATOM 944 CD1 TRP 115 0.468 -23.459 -33.864 1.00162.97 C ATOM 945 NE1 TRP 115 -0.697 -22.818 -33.517 1.00162.97 N ATOM 946 CE2 TRP 115 -1.684 -23.765 -33.347 1.00162.97 C ATOM 947 CE3 TRP 115 -1.861 -26.163 -33.498 1.00162.97 C ATOM 948 CZ2 TRP 115 -2.999 -23.640 -33.001 1.00162.97 C ATOM 949 CZ3 TRP 115 -3.188 -26.032 -33.154 1.00162.97 C ATOM 950 CH2 TRP 115 -3.747 -24.793 -32.910 1.00162.97 C ATOM 951 C TRP 115 2.763 -27.670 -33.617 1.00162.97 C ATOM 952 O TRP 115 3.564 -27.489 -34.532 1.00162.97 O ATOM 953 N ASN 116 2.570 -28.876 -33.055 1.00192.62 N ATOM 954 CA ASN 116 3.260 -30.008 -33.591 1.00192.62 C ATOM 955 CB ASN 116 4.037 -30.814 -32.535 1.00192.62 C ATOM 956 CG ASN 116 4.909 -31.826 -33.265 1.00192.62 C ATOM 957 OD1 ASN 116 4.762 -32.035 -34.469 1.00192.62 O ATOM 958 ND2 ASN 116 5.838 -32.482 -32.520 1.00192.62 N ATOM 959 C ASN 116 2.196 -30.892 -34.139 1.00192.62 C ATOM 960 O ASN 116 1.455 -31.526 -33.389 1.00192.62 O ATOM 961 N ASP 117 2.084 -30.953 -35.478 1.00174.02 N ATOM 962 CA ASP 117 1.046 -31.759 -36.040 1.00174.02 C ATOM 963 CB ASP 117 0.224 -31.029 -37.115 1.00174.02 C ATOM 964 CG ASP 117 -0.975 -31.898 -37.470 1.00174.02 C ATOM 965 OD1 ASP 117 -1.379 -32.731 -36.615 1.00174.02 O ATOM 966 OD2 ASP 117 -1.496 -31.747 -38.607 1.00174.02 O ATOM 967 C ASP 117 1.676 -32.937 -36.701 1.00174.02 C ATOM 968 O ASP 117 2.129 -32.855 -37.841 1.00174.02 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 739 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 112.12 18.2 176 100.0 176 ARMSMC SECONDARY STRUCTURE . . 123.54 7.1 84 100.0 84 ARMSMC SURFACE . . . . . . . . 109.48 20.8 106 100.0 106 ARMSMC BURIED . . . . . . . . 116.00 14.3 70 100.0 70 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 87.61 41.0 78 100.0 78 ARMSSC1 RELIABLE SIDE CHAINS . 87.17 41.4 70 100.0 70 ARMSSC1 SECONDARY STRUCTURE . . 88.62 38.9 36 100.0 36 ARMSSC1 SURFACE . . . . . . . . 88.86 40.8 49 100.0 49 ARMSSC1 BURIED . . . . . . . . 85.47 41.4 29 100.0 29 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 73.21 53.3 60 100.0 60 ARMSSC2 RELIABLE SIDE CHAINS . 71.28 56.6 53 100.0 53 ARMSSC2 SECONDARY STRUCTURE . . 73.07 53.6 28 100.0 28 ARMSSC2 SURFACE . . . . . . . . 74.62 48.6 37 100.0 37 ARMSSC2 BURIED . . . . . . . . 70.89 60.9 23 100.0 23 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 92.94 29.6 27 100.0 27 ARMSSC3 RELIABLE SIDE CHAINS . 93.14 23.5 17 100.0 17 ARMSSC3 SECONDARY STRUCTURE . . 98.54 27.3 11 100.0 11 ARMSSC3 SURFACE . . . . . . . . 89.05 27.3 22 100.0 22 ARMSSC3 BURIED . . . . . . . . 108.39 40.0 5 100.0 5 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 90.51 33.3 12 100.0 12 ARMSSC4 RELIABLE SIDE CHAINS . 90.51 33.3 12 100.0 12 ARMSSC4 SECONDARY STRUCTURE . . 112.87 25.0 4 100.0 4 ARMSSC4 SURFACE . . . . . . . . 97.71 30.0 10 100.0 10 ARMSSC4 BURIED . . . . . . . . 37.61 50.0 2 100.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 66.65 (Number of atoms: 89) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 66.65 89 100.0 89 CRMSCA CRN = ALL/NP . . . . . 0.7488 CRMSCA SECONDARY STRUCTURE . . 62.29 42 100.0 42 CRMSCA SURFACE . . . . . . . . 71.95 54 100.0 54 CRMSCA BURIED . . . . . . . . 57.52 35 100.0 35 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 66.74 439 100.0 439 CRMSMC SECONDARY STRUCTURE . . 62.73 207 100.0 207 CRMSMC SURFACE . . . . . . . . 72.10 268 100.0 268 CRMSMC BURIED . . . . . . . . 57.35 171 100.0 171 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 66.86 383 100.0 383 CRMSSC RELIABLE SIDE CHAINS . 66.06 333 100.0 333 CRMSSC SECONDARY STRUCTURE . . 64.84 192 100.0 192 CRMSSC SURFACE . . . . . . . . 72.07 225 100.0 225 CRMSSC BURIED . . . . . . . . 58.65 158 100.0 158 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 66.77 739 100.0 739 CRMSALL SECONDARY STRUCTURE . . 63.71 360 100.0 360 CRMSALL SURFACE . . . . . . . . 72.07 441 100.0 441 CRMSALL BURIED . . . . . . . . 58.05 298 100.0 298 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 149.239 0.538 0.587 89 100.0 89 ERRCA SECONDARY STRUCTURE . . 160.140 0.587 0.636 42 100.0 42 ERRCA SURFACE . . . . . . . . 144.618 0.503 0.562 54 100.0 54 ERRCA BURIED . . . . . . . . 156.369 0.592 0.627 35 100.0 35 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 150.343 0.539 0.588 439 100.0 439 ERRMC SECONDARY STRUCTURE . . 161.156 0.587 0.635 207 100.0 207 ERRMC SURFACE . . . . . . . . 145.163 0.503 0.562 268 100.0 268 ERRMC BURIED . . . . . . . . 158.462 0.595 0.630 171 100.0 171 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 170.085 0.573 0.624 383 100.0 383 ERRSC RELIABLE SIDE CHAINS . 176.005 0.589 0.642 333 100.0 333 ERRSC SECONDARY STRUCTURE . . 178.734 0.600 0.648 192 100.0 192 ERRSC SURFACE . . . . . . . . 162.192 0.534 0.589 225 100.0 225 ERRSC BURIED . . . . . . . . 181.325 0.629 0.675 158 100.0 158 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 160.028 0.556 0.606 739 100.0 739 ERRALL SECONDARY STRUCTURE . . 170.069 0.594 0.642 360 100.0 360 ERRALL SURFACE . . . . . . . . 153.509 0.518 0.575 441 100.0 441 ERRALL BURIED . . . . . . . . 169.675 0.612 0.653 298 100.0 298 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 1 2 3 89 89 DISTCA CA (P) 0.00 0.00 1.12 2.25 3.37 89 DISTCA CA (RMS) 0.00 0.00 2.98 4.02 5.17 DISTCA ALL (N) 0 0 4 9 27 739 739 DISTALL ALL (P) 0.00 0.00 0.54 1.22 3.65 739 DISTALL ALL (RMS) 0.00 0.00 2.71 3.74 7.07 DISTALL END of the results output