####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 49 ( 342), selected 49 , name T0605TS316_1-D1 # Molecule2: number of CA atoms 49 ( 417), selected 49 , name T0605-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0605TS316_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 18 - 42 4.82 32.04 LONGEST_CONTINUOUS_SEGMENT: 25 33 - 57 4.74 22.49 LONGEST_CONTINUOUS_SEGMENT: 25 34 - 58 4.64 22.86 LONGEST_CONTINUOUS_SEGMENT: 25 35 - 59 4.91 23.35 LCS_AVERAGE: 50.15 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 20 - 38 1.62 33.63 LONGEST_CONTINUOUS_SEGMENT: 19 21 - 39 1.99 33.24 LCS_AVERAGE: 36.03 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 38 - 53 0.53 23.25 LCS_AVERAGE: 27.24 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 49 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT R 18 R 18 3 15 25 0 3 4 4 6 8 13 15 18 20 21 21 22 22 22 22 23 24 24 24 LCS_GDT G 19 G 19 3 17 25 2 3 4 4 6 7 13 15 18 19 21 21 22 22 22 22 23 24 24 24 LCS_GDT S 20 S 20 15 19 25 12 13 14 16 18 19 19 20 20 20 21 21 22 22 22 23 23 24 24 24 LCS_GDT L 21 L 21 15 19 25 12 13 14 16 18 19 19 20 20 20 21 21 22 22 22 23 23 24 24 24 LCS_GDT R 22 R 22 15 19 25 12 13 14 16 18 19 19 20 20 20 21 21 22 22 22 23 23 24 24 24 LCS_GDT D 23 D 23 15 19 25 12 13 14 16 18 19 19 20 20 20 21 21 22 22 22 23 23 24 24 24 LCS_GDT L 24 L 24 15 19 25 12 13 14 16 18 19 19 20 20 20 21 21 22 22 22 23 23 24 24 24 LCS_GDT Q 25 Q 25 15 19 25 12 13 14 16 18 19 19 20 20 20 21 21 22 22 22 23 23 24 24 24 LCS_GDT Y 26 Y 26 15 19 25 12 13 14 16 18 19 19 20 20 20 21 21 22 22 22 23 23 24 24 24 LCS_GDT A 27 A 27 15 19 25 12 13 14 16 18 19 19 20 20 20 21 21 22 22 22 23 23 24 24 24 LCS_GDT L 28 L 28 15 19 25 12 13 14 16 18 19 19 20 20 20 21 21 22 22 22 23 23 24 24 24 LCS_GDT Q 29 Q 29 15 19 25 12 13 14 16 18 19 19 20 20 20 21 21 22 22 22 23 23 24 24 24 LCS_GDT E 30 E 30 15 19 25 12 13 14 16 18 19 19 20 20 20 21 21 22 22 22 23 23 24 24 24 LCS_GDT K 31 K 31 15 19 25 12 13 14 16 18 19 19 20 20 20 21 21 22 22 22 23 23 24 24 24 LCS_GDT I 32 I 32 15 19 25 7 13 14 16 18 19 19 20 20 20 21 21 22 22 22 23 23 24 24 25 LCS_GDT E 33 E 33 15 19 25 7 8 14 16 18 19 19 20 20 20 21 21 22 22 22 23 23 24 25 25 LCS_GDT E 34 E 34 15 19 25 7 8 14 16 18 19 19 20 20 20 21 22 23 24 24 24 25 25 26 27 LCS_GDT L 35 L 35 12 19 25 7 8 12 16 18 19 19 20 20 20 21 22 23 24 24 24 25 25 26 27 LCS_GDT R 36 R 36 12 19 25 7 8 12 16 18 19 19 20 20 20 21 22 23 24 24 24 25 25 26 27 LCS_GDT Q 37 Q 37 12 19 25 7 8 12 15 17 19 19 20 20 20 21 22 23 24 24 24 25 25 26 27 LCS_GDT R 38 R 38 16 19 25 4 15 16 16 18 19 19 20 20 20 21 22 23 24 24 24 25 25 26 27 LCS_GDT D 39 D 39 16 19 25 11 15 16 16 16 17 18 20 20 20 21 22 23 24 24 24 25 25 26 27 LCS_GDT A 40 A 40 16 18 25 9 15 16 16 16 16 18 18 19 20 21 22 23 24 24 24 25 25 26 27 LCS_GDT L 41 L 41 16 18 25 11 15 16 16 16 16 18 18 19 20 21 22 23 24 24 24 25 25 26 27 LCS_GDT I 42 I 42 16 18 25 11 15 16 16 16 16 18 18 19 20 21 22 23 24 24 24 25 25 26 27 LCS_GDT D 43 D 43 16 18 25 11 15 16 16 16 16 18 18 19 20 21 22 23 24 24 24 25 25 26 27 LCS_GDT E 44 E 44 16 18 25 11 15 16 16 16 16 18 18 19 20 21 22 23 24 24 24 25 25 26 27 LCS_GDT L 45 L 45 16 18 25 11 15 16 16 16 16 18 18 19 20 21 22 23 24 24 24 25 25 26 27 LCS_GDT E 46 E 46 16 18 25 11 15 16 16 16 16 18 18 19 20 21 22 23 24 24 24 25 25 26 27 LCS_GDT L 47 L 47 16 18 25 11 15 16 16 16 16 18 18 19 20 21 22 23 24 24 24 25 25 26 27 LCS_GDT E 48 E 48 16 18 25 11 15 16 16 16 16 18 18 19 20 21 22 23 24 24 24 25 25 26 27 LCS_GDT L 49 L 49 16 18 25 11 15 16 16 16 16 18 18 19 20 21 22 23 24 24 24 25 25 26 27 LCS_GDT D 50 D 50 16 18 25 11 15 16 16 16 16 18 18 19 20 21 22 23 24 24 24 25 25 26 27 LCS_GDT Q 51 Q 51 16 18 25 11 15 16 16 16 16 18 18 19 20 21 22 23 24 24 24 25 25 26 27 LCS_GDT K 52 K 52 16 18 25 11 15 16 16 16 16 18 18 19 20 21 22 23 24 24 24 25 25 26 27 LCS_GDT D 53 D 53 16 18 25 11 15 16 16 16 16 18 18 19 20 21 22 23 24 24 24 25 25 26 27 LCS_GDT E 54 E 54 11 18 25 9 9 10 12 15 15 18 18 19 20 21 22 23 24 24 24 25 25 26 27 LCS_GDT L 55 L 55 11 18 25 9 9 10 12 15 15 18 18 19 20 20 22 23 24 24 24 25 25 26 27 LCS_GDT I 56 I 56 11 15 25 9 9 10 12 15 15 15 16 19 20 20 21 21 24 24 24 25 25 26 27 LCS_GDT Q 57 Q 57 11 15 25 9 9 10 12 15 15 15 18 19 20 20 21 23 24 24 24 25 25 26 27 LCS_GDT M 58 M 58 11 15 25 9 9 10 12 15 15 15 15 15 17 19 21 21 22 23 24 25 25 26 27 LCS_GDT L 59 L 59 11 15 25 9 9 10 12 15 15 15 15 15 16 17 19 21 22 23 24 24 24 26 27 LCS_GDT Q 60 Q 60 11 15 24 9 9 10 12 15 15 15 15 15 16 17 19 21 22 23 24 24 24 26 27 LCS_GDT N 61 N 61 11 15 24 6 8 10 12 15 15 15 15 15 16 17 18 19 21 22 24 24 24 25 26 LCS_GDT E 62 E 62 11 15 22 6 8 10 12 15 15 15 15 15 16 17 18 18 19 20 21 22 23 25 25 LCS_GDT L 63 L 63 8 15 21 6 8 10 12 15 15 15 15 15 16 17 18 18 19 20 21 22 22 24 25 LCS_GDT D 64 D 64 8 15 21 6 8 10 12 15 15 15 15 15 16 17 18 18 19 20 21 22 22 24 25 LCS_GDT K 65 K 65 8 15 21 6 8 10 12 15 15 15 15 15 16 17 18 18 19 19 20 20 22 22 23 LCS_GDT Y 66 Y 66 8 15 21 6 8 10 12 15 15 15 15 15 16 17 17 18 19 19 19 20 21 21 23 LCS_AVERAGE LCS_A: 37.80 ( 27.24 36.03 50.15 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 12 15 16 16 18 19 19 20 20 20 21 22 23 24 24 24 25 25 26 27 GDT PERCENT_AT 24.49 30.61 32.65 32.65 36.73 38.78 38.78 40.82 40.82 40.82 42.86 44.90 46.94 48.98 48.98 48.98 51.02 51.02 53.06 55.10 GDT RMS_LOCAL 0.35 0.43 0.53 0.53 1.51 1.62 1.62 2.01 2.01 2.01 2.52 3.56 3.93 4.13 4.13 4.13 4.64 4.64 5.14 5.53 GDT RMS_ALL_AT 35.56 23.20 23.25 23.25 33.80 33.63 33.63 33.31 33.31 33.31 33.81 22.66 22.66 22.75 22.75 22.75 22.86 22.86 23.08 23.20 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA R 18 R 18 8.515 6 0.540 0.512 8.515 4.286 1.991 LGA G 19 G 19 8.557 0 0.508 0.508 9.269 7.857 7.857 LGA S 20 S 20 2.134 1 0.597 0.535 4.199 64.048 54.841 LGA L 21 L 21 2.621 3 0.018 0.019 3.218 60.952 36.726 LGA R 22 R 22 2.070 6 0.043 0.040 2.512 73.095 31.775 LGA D 23 D 23 0.609 3 0.006 0.007 1.115 92.976 58.988 LGA L 24 L 24 1.110 3 0.016 0.015 1.626 83.690 50.952 LGA Q 25 Q 25 0.886 4 0.041 0.044 0.998 90.476 50.265 LGA Y 26 Y 26 0.774 7 0.016 0.018 1.562 86.190 36.270 LGA A 27 A 27 1.613 0 0.072 0.077 1.955 75.000 74.571 LGA L 28 L 28 1.513 3 0.013 0.012 1.647 77.143 48.750 LGA Q 29 Q 29 1.390 4 0.013 0.026 1.923 77.143 43.333 LGA E 30 E 30 2.179 4 0.044 0.046 2.773 64.881 36.032 LGA K 31 K 31 2.673 4 0.191 0.195 2.992 64.881 35.185 LGA I 32 I 32 1.996 3 0.003 0.012 2.382 75.119 45.655 LGA E 33 E 33 1.458 4 0.055 0.061 1.960 81.548 44.339 LGA E 34 E 34 1.117 4 0.035 0.037 1.403 88.333 48.307 LGA L 35 L 35 0.952 3 0.011 0.011 1.593 88.214 53.214 LGA R 36 R 36 0.980 6 0.043 0.044 2.275 79.643 37.186 LGA Q 37 Q 37 2.219 4 0.054 0.057 2.701 67.024 36.138 LGA R 38 R 38 1.772 6 0.587 0.542 5.577 54.762 28.139 LGA D 39 D 39 5.139 3 0.042 0.046 9.685 20.952 14.405 LGA A 40 A 40 11.295 0 0.104 0.107 14.188 0.714 0.571 LGA L 41 L 41 11.720 3 0.024 0.025 15.583 0.000 0.000 LGA I 42 I 42 13.662 3 0.149 0.163 17.502 0.000 0.000 LGA D 43 D 43 17.151 3 0.037 0.041 21.713 0.000 0.000 LGA E 44 E 44 21.564 4 0.008 0.013 25.157 0.000 0.000 LGA L 45 L 45 22.825 3 0.065 0.071 26.626 0.000 0.000 LGA E 46 E 46 24.482 4 0.037 0.037 28.742 0.000 0.000 LGA L 47 L 47 28.873 3 0.033 0.034 33.206 0.000 0.000 LGA E 48 E 48 32.313 4 0.079 0.087 35.968 0.000 0.000 LGA L 49 L 49 33.749 3 0.009 0.014 37.468 0.000 0.000 LGA D 50 D 50 35.838 3 0.023 0.029 40.427 0.000 0.000 LGA Q 51 Q 51 40.709 4 0.045 0.049 44.720 0.000 0.000 LGA K 52 K 52 42.663 4 0.501 0.472 44.738 0.000 0.000 LGA D 53 D 53 44.665 3 0.056 0.061 48.028 0.000 0.000 LGA E 54 E 54 50.470 4 0.008 0.012 52.966 0.000 0.000 LGA L 55 L 55 50.669 3 0.015 0.016 52.167 0.000 0.000 LGA I 56 I 56 48.699 3 0.024 0.035 51.603 0.000 0.000 LGA Q 57 Q 57 52.816 4 0.055 0.061 56.398 0.000 0.000 LGA M 58 M 58 57.218 3 0.064 0.064 59.206 0.000 0.000 LGA L 59 L 59 55.616 3 0.125 0.130 57.058 0.000 0.000 LGA Q 60 Q 60 55.908 4 0.019 0.019 58.251 0.000 0.000 LGA N 61 N 61 60.226 3 0.098 0.102 61.650 0.000 0.000 LGA E 62 E 62 60.995 4 0.052 0.051 61.135 0.000 0.000 LGA L 63 L 63 58.591 3 0.008 0.010 59.416 0.000 0.000 LGA D 64 D 64 59.683 3 0.047 0.050 61.413 0.000 0.000 LGA K 65 K 65 63.306 4 0.038 0.041 64.207 0.000 0.000 LGA Y 66 Y 66 62.649 7 0.005 0.005 62.904 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 49 196 196 100.00 417 244 58.51 49 SUMMARY(RMSD_GDC): 19.290 19.170 19.201 30.182 17.867 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 49 49 4.0 20 2.01 38.265 38.348 0.946 LGA_LOCAL RMSD: 2.014 Number of atoms: 20 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 33.312 Number of assigned atoms: 49 Std_ASGN_ATOMS RMSD: 19.290 Standard rmsd on all 49 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.730302 * X + 0.565719 * Y + 0.382910 * Z + -9.285922 Y_new = -0.140515 * X + 0.672944 * Y + -0.726224 * Z + 56.257317 Z_new = -0.668517 * X + 0.476558 * Y + 0.570945 * Z + 0.336350 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.190084 0.732212 0.695535 [DEG: -10.8910 41.9527 39.8512 ] ZXZ: 0.485219 0.963140 -0.951492 [DEG: 27.8010 55.1839 -54.5165 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0605TS316_1-D1 REMARK 2: T0605-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0605TS316_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 49 49 4.0 20 2.01 38.348 19.29 REMARK ---------------------------------------------------------- MOLECULE T0605TS316_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0605 REMARK MODEL 1 REMARK PARENT N/A ATOM 117 N ARG 18 5.796 64.566 16.400 1.00 0.00 N ATOM 118 CA ARG 18 4.529 65.274 16.535 1.00 0.00 C ATOM 119 C ARG 18 3.349 64.319 16.420 1.00 0.00 C ATOM 120 O ARG 18 2.585 64.374 15.456 1.00 0.00 O ATOM 121 CB ARG 18 4.410 66.429 15.550 1.00 0.00 C ATOM 122 CEN ARG 18 4.488 68.723 14.612 1.00 0.00 C ATOM 123 H ARG 18 5.954 63.991 15.586 1.00 0.00 H ATOM 124 N GLY 19 3.204 63.445 17.410 1.00 0.00 N ATOM 125 CA GLY 19 2.277 62.323 17.311 1.00 0.00 C ATOM 126 C GLY 19 0.854 62.804 17.058 1.00 0.00 C ATOM 127 O GLY 19 0.349 63.676 17.766 1.00 0.00 O ATOM 128 CEN GLY 19 2.277 62.323 17.312 1.00 0.00 C ATOM 129 H GLY 19 3.749 63.559 18.252 1.00 0.00 H ATOM 130 N SER 20 0.213 62.233 16.045 1.00 0.00 N ATOM 131 CA SER 20 -1.084 62.716 15.588 1.00 0.00 C ATOM 132 C SER 20 -2.218 61.881 16.167 1.00 0.00 C ATOM 133 O SER 20 -2.331 60.688 15.885 1.00 0.00 O ATOM 134 CB SER 20 -1.142 62.707 14.074 1.00 0.00 C ATOM 135 CEN SER 20 -1.052 62.543 13.563 1.00 0.00 C ATOM 136 H SER 20 0.635 61.443 15.579 1.00 0.00 H ATOM 137 N LEU 21 -3.058 62.514 16.980 1.00 0.00 N ATOM 138 CA LEU 21 -4.215 61.843 17.560 1.00 0.00 C ATOM 139 C LEU 21 -5.239 61.487 16.491 1.00 0.00 C ATOM 140 O LEU 21 -5.999 60.530 16.640 1.00 0.00 O ATOM 141 CB LEU 21 -4.855 62.728 18.638 1.00 0.00 C ATOM 142 CEN LEU 21 -4.836 62.679 20.178 1.00 0.00 C ATOM 143 H LEU 21 -2.890 63.485 17.201 1.00 0.00 H ATOM 144 N ARG 22 -5.254 62.262 15.413 1.00 0.00 N ATOM 145 CA ARG 22 -6.095 61.955 14.261 1.00 0.00 C ATOM 146 C ARG 22 -5.732 60.605 13.657 1.00 0.00 C ATOM 147 O ARG 22 -6.606 59.789 13.365 1.00 0.00 O ATOM 148 CB ARG 22 -6.060 63.060 13.215 1.00 0.00 C ATOM 149 CEN ARG 22 -6.693 65.080 11.921 1.00 0.00 C ATOM 150 H ARG 22 -4.669 63.084 15.388 1.00 0.00 H ATOM 151 N ASP 23 -4.436 60.374 13.472 1.00 0.00 N ATOM 152 CA ASP 23 -3.953 59.111 12.926 1.00 0.00 C ATOM 153 C ASP 23 -4.230 57.956 13.879 1.00 0.00 C ATOM 154 O ASP 23 -4.541 56.845 13.450 1.00 0.00 O ATOM 155 CB ASP 23 -2.456 59.196 12.624 1.00 0.00 C ATOM 156 CEN ASP 23 -1.820 59.364 11.845 1.00 0.00 C ATOM 157 H ASP 23 -3.769 61.092 13.717 1.00 0.00 H ATOM 158 N LEU 24 -4.116 58.226 15.175 1.00 0.00 N ATOM 159 CA LEU 24 -4.465 57.244 16.195 1.00 0.00 C ATOM 160 C LEU 24 -5.933 56.847 16.098 1.00 0.00 C ATOM 161 O LEU 24 -6.276 55.669 16.209 1.00 0.00 O ATOM 162 CB LEU 24 -4.154 57.796 17.592 1.00 0.00 C ATOM 163 CEN LEU 24 -3.020 57.517 18.597 1.00 0.00 C ATOM 164 H LEU 24 -3.779 59.133 15.462 1.00 0.00 H ATOM 165 N GLN 25 -6.796 57.835 15.890 1.00 0.00 N ATOM 166 CA GLN 25 -8.219 57.583 15.699 1.00 0.00 C ATOM 167 C GLN 25 -8.468 56.751 14.448 1.00 0.00 C ATOM 168 O GLN 25 -9.260 55.808 14.465 1.00 0.00 O ATOM 169 CB GLN 25 -8.990 58.902 15.604 1.00 0.00 C ATOM 170 CEN GLN 25 -9.992 60.028 16.484 1.00 0.00 C ATOM 171 H GLN 25 -6.457 58.787 15.863 1.00 0.00 H ATOM 172 N TYR 26 -7.787 57.104 13.363 1.00 0.00 N ATOM 173 CA TYR 26 -7.916 56.376 12.107 1.00 0.00 C ATOM 174 C TYR 26 -7.442 54.936 12.253 1.00 0.00 C ATOM 175 O TYR 26 -8.082 54.007 11.758 1.00 0.00 O ATOM 176 CB TYR 26 -7.128 57.077 10.998 1.00 0.00 C ATOM 177 CEN TYR 26 -7.381 58.155 9.640 1.00 0.00 C ATOM 178 H TYR 26 -7.163 57.897 13.411 1.00 0.00 H ATOM 179 N ALA 27 -6.316 54.755 12.936 1.00 0.00 N ATOM 180 CA ALA 27 -5.796 53.423 13.217 1.00 0.00 C ATOM 181 C ALA 27 -6.646 52.707 14.259 1.00 0.00 C ATOM 182 O ALA 27 -6.729 51.479 14.270 1.00 0.00 O ATOM 183 CB ALA 27 -4.347 53.505 13.676 1.00 0.00 C ATOM 184 CEN ALA 27 -4.348 53.505 13.676 1.00 0.00 C ATOM 185 H ALA 27 -5.809 55.562 13.268 1.00 0.00 H ATOM 186 N LEU 28 -7.278 53.482 15.133 1.00 0.00 N ATOM 187 CA LEU 28 -8.201 52.932 16.118 1.00 0.00 C ATOM 188 C LEU 28 -9.473 52.420 15.455 1.00 0.00 C ATOM 189 O LEU 28 -10.004 51.376 15.832 1.00 0.00 O ATOM 190 CB LEU 28 -8.538 53.990 17.177 1.00 0.00 C ATOM 191 CEN LEU 28 -8.083 54.192 18.635 1.00 0.00 C ATOM 192 H LEU 28 -7.114 54.479 15.115 1.00 0.00 H ATOM 193 N GLN 29 -9.959 53.163 14.467 1.00 0.00 N ATOM 194 CA GLN 29 -11.126 52.748 13.698 1.00 0.00 C ATOM 195 C GLN 29 -10.813 51.533 12.834 1.00 0.00 C ATOM 196 O GLN 29 -11.650 50.645 12.666 1.00 0.00 O ATOM 197 CB GLN 29 -11.622 53.895 12.814 1.00 0.00 C ATOM 198 CEN GLN 29 -12.815 55.162 12.670 1.00 0.00 C ATOM 199 H GLN 29 -9.508 54.039 14.241 1.00 0.00 H ATOM 200 N GLU 30 -9.601 51.498 12.287 1.00 0.00 N ATOM 201 CA GLU 30 -9.171 50.386 11.447 1.00 0.00 C ATOM 202 C GLU 30 -8.966 49.122 12.270 1.00 0.00 C ATOM 203 O GLU 30 -9.185 48.012 11.785 1.00 0.00 O ATOM 204 CB GLU 30 -7.882 50.745 10.704 1.00 0.00 C ATOM 205 CEN GLU 30 -7.091 51.276 9.292 1.00 0.00 C ATOM 206 H GLU 30 -8.962 52.261 12.459 1.00 0.00 H ATOM 207 N LYS 31 -8.546 49.295 13.519 1.00 0.00 N ATOM 208 CA LYS 31 -8.283 48.165 14.403 1.00 0.00 C ATOM 209 C LYS 31 -9.526 47.788 15.199 1.00 0.00 C ATOM 210 O LYS 31 -9.532 46.796 15.926 1.00 0.00 O ATOM 211 CB LYS 31 -7.127 48.485 15.352 1.00 0.00 C ATOM 212 CEN LYS 31 -5.094 48.232 15.877 1.00 0.00 C ATOM 213 H LYS 31 -8.404 50.233 13.864 1.00 0.00 H ATOM 214 N ILE 32 -10.578 48.588 15.057 1.00 0.00 N ATOM 215 CA ILE 32 -11.834 48.333 15.754 1.00 0.00 C ATOM 216 C ILE 32 -12.396 46.964 15.393 1.00 0.00 C ATOM 217 O ILE 32 -12.791 46.194 16.268 1.00 0.00 O ATOM 218 CB ILE 32 -12.886 49.410 15.434 1.00 0.00 C ATOM 219 CEN ILE 32 -13.265 50.395 15.707 1.00 0.00 C ATOM 220 H ILE 32 -10.507 49.392 14.451 1.00 0.00 H ATOM 221 N GLU 33 -12.429 46.666 14.098 1.00 0.00 N ATOM 222 CA GLU 33 -12.899 45.371 13.622 1.00 0.00 C ATOM 223 C GLU 33 -12.072 44.234 14.209 1.00 0.00 C ATOM 224 O GLU 33 -12.617 43.240 14.688 1.00 0.00 O ATOM 225 CB GLU 33 -12.859 45.315 12.093 1.00 0.00 C ATOM 226 CEN GLU 33 -13.652 45.434 10.590 1.00 0.00 C ATOM 227 H GLU 33 -12.120 47.355 13.427 1.00 0.00 H ATOM 228 N GLU 34 -10.753 44.387 14.168 1.00 0.00 N ATOM 229 CA GLU 34 -9.848 43.384 14.717 1.00 0.00 C ATOM 230 C GLU 34 -10.107 43.161 16.201 1.00 0.00 C ATOM 231 O GLU 34 -10.115 42.026 16.676 1.00 0.00 O ATOM 232 CB GLU 34 -8.391 43.798 14.493 1.00 0.00 C ATOM 233 CEN GLU 34 -6.944 43.683 13.602 1.00 0.00 C ATOM 234 H GLU 34 -10.366 45.220 13.746 1.00 0.00 H ATOM 235 N LEU 35 -10.320 44.252 16.930 1.00 0.00 N ATOM 236 CA LEU 35 -10.563 44.179 18.365 1.00 0.00 C ATOM 237 C LEU 35 -11.870 43.457 18.665 1.00 0.00 C ATOM 238 O LEU 35 -11.965 42.698 19.631 1.00 0.00 O ATOM 239 CB LEU 35 -10.579 45.587 18.973 1.00 0.00 C ATOM 240 CEN LEU 35 -9.558 46.373 19.817 1.00 0.00 C ATOM 241 H LEU 35 -10.311 45.155 16.477 1.00 0.00 H ATOM 242 N ARG 36 -12.879 43.698 17.833 1.00 0.00 N ATOM 243 CA ARG 36 -14.180 43.064 18.002 1.00 0.00 C ATOM 244 C ARG 36 -14.055 41.546 18.019 1.00 0.00 C ATOM 245 O ARG 36 -14.590 40.879 18.905 1.00 0.00 O ATOM 246 CB ARG 36 -15.185 43.528 16.958 1.00 0.00 C ATOM 247 CEN ARG 36 -17.021 44.798 15.880 1.00 0.00 C ATOM 248 H ARG 36 -12.738 44.337 17.064 1.00 0.00 H ATOM 249 N GLN 37 -13.344 41.004 17.036 1.00 0.00 N ATOM 250 CA GLN 37 -13.135 39.564 16.944 1.00 0.00 C ATOM 251 C GLN 37 -12.018 39.110 17.874 1.00 0.00 C ATOM 252 O GLN 37 -12.037 37.987 18.381 1.00 0.00 O ATOM 253 CB GLN 37 -12.805 39.161 15.504 1.00 0.00 C ATOM 254 CEN GLN 37 -13.458 38.482 14.035 1.00 0.00 C ATOM 255 H GLN 37 -12.939 41.606 16.333 1.00 0.00 H ATOM 256 N ARG 38 -11.045 39.987 18.096 1.00 0.00 N ATOM 257 CA ARG 38 -9.913 39.674 18.960 1.00 0.00 C ATOM 258 C ARG 38 -9.800 40.675 20.103 1.00 0.00 C ATOM 259 O ARG 38 -9.345 41.802 19.911 1.00 0.00 O ATOM 260 CB ARG 38 -8.610 39.567 18.181 1.00 0.00 C ATOM 261 CEN ARG 38 -6.697 38.588 16.942 1.00 0.00 C ATOM 262 H ARG 38 -11.092 40.894 17.655 1.00 0.00 H ATOM 263 N ASP 39 -10.215 40.254 21.293 1.00 0.00 N ATOM 264 CA ASP 39 -10.158 41.112 22.471 1.00 0.00 C ATOM 265 C ASP 39 -8.718 41.442 22.843 1.00 0.00 C ATOM 266 O ASP 39 -8.437 42.504 23.398 1.00 0.00 O ATOM 267 CB ASP 39 -10.867 40.448 23.654 1.00 0.00 C ATOM 268 CEN ASP 39 -11.766 40.454 24.133 1.00 0.00 C ATOM 269 H ASP 39 -10.581 39.317 21.384 1.00 0.00 H ATOM 270 N ALA 40 -7.807 40.524 22.533 1.00 0.00 N ATOM 271 CA ALA 40 -6.391 40.726 22.810 1.00 0.00 C ATOM 272 C ALA 40 -5.852 41.943 22.067 1.00 0.00 C ATOM 273 O ALA 40 -4.814 42.496 22.432 1.00 0.00 O ATOM 274 CB ALA 40 -5.596 39.482 22.441 1.00 0.00 C ATOM 275 CEN ALA 40 -5.595 39.484 22.441 1.00 0.00 C ATOM 276 H ALA 40 -8.105 39.664 22.094 1.00 0.00 H ATOM 277 N LEU 41 -6.564 42.355 21.024 1.00 0.00 N ATOM 278 CA LEU 41 -6.204 43.555 20.277 1.00 0.00 C ATOM 279 C LEU 41 -6.457 44.812 21.099 1.00 0.00 C ATOM 280 O LEU 41 -5.668 45.757 21.065 1.00 0.00 O ATOM 281 CB LEU 41 -6.987 43.614 18.959 1.00 0.00 C ATOM 282 CEN LEU 41 -6.593 43.338 17.496 1.00 0.00 C ATOM 283 H LEU 41 -7.375 41.824 20.740 1.00 0.00 H ATOM 284 N ILE 42 -7.561 44.817 21.838 1.00 0.00 N ATOM 285 CA ILE 42 -7.952 45.983 22.622 1.00 0.00 C ATOM 286 C ILE 42 -7.091 46.122 23.871 1.00 0.00 C ATOM 287 O ILE 42 -7.049 47.183 24.493 1.00 0.00 O ATOM 288 CB ILE 42 -9.433 45.914 23.037 1.00 0.00 C ATOM 289 CEN ILE 42 -10.457 46.132 22.731 1.00 0.00 C ATOM 290 H ILE 42 -8.144 43.993 21.857 1.00 0.00 H ATOM 291 N ASP 43 -6.405 45.043 24.233 1.00 0.00 N ATOM 292 CA ASP 43 -5.411 45.090 25.298 1.00 0.00 C ATOM 293 C ASP 43 -4.235 45.979 24.916 1.00 0.00 C ATOM 294 O ASP 43 -3.823 46.845 25.687 1.00 0.00 O ATOM 295 CB ASP 43 -4.915 43.680 25.632 1.00 0.00 C ATOM 296 CEN ASP 43 -5.077 42.930 26.303 1.00 0.00 C ATOM 297 H ASP 43 -6.578 44.168 23.759 1.00 0.00 H ATOM 298 N GLU 44 -3.699 45.761 23.720 1.00 0.00 N ATOM 299 CA GLU 44 -2.609 46.582 23.207 1.00 0.00 C ATOM 300 C GLU 44 -3.037 48.036 23.058 1.00 0.00 C ATOM 301 O GLU 44 -2.307 48.951 23.439 1.00 0.00 O ATOM 302 CB GLU 44 -2.114 46.040 21.865 1.00 0.00 C ATOM 303 CEN GLU 44 -0.991 45.128 20.964 1.00 0.00 C ATOM 304 H GLU 44 -4.055 45.006 23.151 1.00 0.00 H ATOM 305 N LEU 45 -4.227 48.243 22.502 1.00 0.00 N ATOM 306 CA LEU 45 -4.722 49.586 22.232 1.00 0.00 C ATOM 307 C LEU 45 -4.844 50.398 23.515 1.00 0.00 C ATOM 308 O LEU 45 -4.401 51.545 23.579 1.00 0.00 O ATOM 309 CB LEU 45 -6.076 49.518 21.514 1.00 0.00 C ATOM 310 CEN LEU 45 -6.494 49.740 20.048 1.00 0.00 C ATOM 311 H LEU 45 -4.802 47.448 22.261 1.00 0.00 H ATOM 312 N GLU 46 -5.446 49.796 24.534 1.00 0.00 N ATOM 313 CA GLU 46 -5.593 50.448 25.831 1.00 0.00 C ATOM 314 C GLU 46 -4.235 50.778 26.438 1.00 0.00 C ATOM 315 O GLU 46 -4.050 51.844 27.025 1.00 0.00 O ATOM 316 CB GLU 46 -6.397 49.564 26.787 1.00 0.00 C ATOM 317 CEN GLU 46 -7.871 49.165 27.543 1.00 0.00 C ATOM 318 H GLU 46 -5.813 48.864 24.408 1.00 0.00 H ATOM 319 N LEU 47 -3.289 49.858 26.294 1.00 0.00 N ATOM 320 CA LEU 47 -1.950 50.042 26.841 1.00 0.00 C ATOM 321 C LEU 47 -1.299 51.303 26.290 1.00 0.00 C ATOM 322 O LEU 47 -0.781 52.127 27.045 1.00 0.00 O ATOM 323 CB LEU 47 -1.080 48.816 26.537 1.00 0.00 C ATOM 324 CEN LEU 47 -0.596 47.638 27.403 1.00 0.00 C ATOM 325 H LEU 47 -3.502 49.007 25.791 1.00 0.00 H ATOM 326 N GLU 48 -1.327 51.450 24.969 1.00 0.00 N ATOM 327 CA GLU 48 -0.658 52.563 24.308 1.00 0.00 C ATOM 328 C GLU 48 -1.279 53.896 24.705 1.00 0.00 C ATOM 329 O GLU 48 -0.571 54.853 25.017 1.00 0.00 O ATOM 330 CB GLU 48 -0.710 52.392 22.788 1.00 0.00 C ATOM 331 CEN GLU 48 0.032 51.919 21.329 1.00 0.00 C ATOM 332 H GLU 48 -1.827 50.773 24.411 1.00 0.00 H ATOM 333 N LEU 49 -2.607 53.951 24.694 1.00 0.00 N ATOM 334 CA LEU 49 -3.327 55.157 25.086 1.00 0.00 C ATOM 335 C LEU 49 -3.048 55.517 26.539 1.00 0.00 C ATOM 336 O LEU 49 -2.873 56.689 26.874 1.00 0.00 O ATOM 337 CB LEU 49 -4.833 54.971 24.862 1.00 0.00 C ATOM 338 CEN LEU 49 -5.802 55.491 23.783 1.00 0.00 C ATOM 339 H LEU 49 -3.131 53.137 24.407 1.00 0.00 H ATOM 340 N ASP 50 -3.007 54.505 27.397 1.00 0.00 N ATOM 341 CA ASP 50 -2.625 54.698 28.791 1.00 0.00 C ATOM 342 C ASP 50 -1.288 55.418 28.902 1.00 0.00 C ATOM 343 O ASP 50 -1.136 56.346 29.696 1.00 0.00 O ATOM 344 CB ASP 50 -2.560 53.353 29.521 1.00 0.00 C ATOM 345 CEN ASP 50 -3.124 52.763 30.128 1.00 0.00 C ATOM 346 H ASP 50 -3.246 53.578 27.077 1.00 0.00 H ATOM 347 N GLN 51 -0.321 54.986 28.100 1.00 0.00 N ATOM 348 CA GLN 51 0.990 55.625 28.067 1.00 0.00 C ATOM 349 C GLN 51 0.924 56.983 27.380 1.00 0.00 C ATOM 350 O GLN 51 1.565 57.940 27.815 1.00 0.00 O ATOM 351 CB GLN 51 2.003 54.731 27.349 1.00 0.00 C ATOM 352 CEN GLN 51 3.308 53.594 27.578 1.00 0.00 C ATOM 353 H GLN 51 -0.498 54.195 27.498 1.00 0.00 H ATOM 354 N LYS 52 0.146 57.060 26.306 1.00 0.00 N ATOM 355 CA LYS 52 -0.122 58.331 25.643 1.00 0.00 C ATOM 356 C LYS 52 -1.309 59.044 26.279 1.00 0.00 C ATOM 357 O LYS 52 -2.354 59.210 25.650 1.00 0.00 O ATOM 358 CB LYS 52 -0.375 58.113 24.151 1.00 0.00 C ATOM 359 CEN LYS 52 0.328 58.234 22.160 1.00 0.00 C ATOM 360 H LYS 52 -0.271 56.217 25.939 1.00 0.00 H ATOM 361 N ASP 53 -1.141 59.464 27.528 1.00 0.00 N ATOM 362 CA ASP 53 -2.210 60.129 28.263 1.00 0.00 C ATOM 363 C ASP 53 -2.559 61.471 27.634 1.00 0.00 C ATOM 364 O ASP 53 -3.733 61.817 27.495 1.00 0.00 O ATOM 365 CB ASP 53 -1.814 60.321 29.729 1.00 0.00 C ATOM 366 CEN ASP 53 -1.944 59.886 30.641 1.00 0.00 C ATOM 367 H ASP 53 -0.249 59.320 27.980 1.00 0.00 H ATOM 368 N GLU 54 -1.534 62.226 27.255 1.00 0.00 N ATOM 369 CA GLU 54 -1.729 63.550 26.678 1.00 0.00 C ATOM 370 C GLU 54 -2.292 63.458 25.266 1.00 0.00 C ATOM 371 O GLU 54 -3.107 64.286 24.857 1.00 0.00 O ATOM 372 CB GLU 54 -0.412 64.330 26.668 1.00 0.00 C ATOM 373 CEN GLU 54 0.621 65.493 27.365 1.00 0.00 C ATOM 374 H GLU 54 -0.594 61.873 27.370 1.00 0.00 H ATOM 375 N LEU 55 -1.855 62.446 24.525 1.00 0.00 N ATOM 376 CA LEU 55 -2.336 62.228 23.165 1.00 0.00 C ATOM 377 C LEU 55 -3.813 61.854 23.156 1.00 0.00 C ATOM 378 O LEU 55 -4.591 62.378 22.361 1.00 0.00 O ATOM 379 CB LEU 55 -1.505 61.136 22.479 1.00 0.00 C ATOM 380 CEN LEU 55 -0.394 61.184 21.412 1.00 0.00 C ATOM 381 H LEU 55 -1.172 61.812 24.912 1.00 0.00 H ATOM 382 N ILE 56 -4.193 60.945 24.048 1.00 0.00 N ATOM 383 CA ILE 56 -5.583 60.521 24.164 1.00 0.00 C ATOM 384 C ILE 56 -6.472 61.665 24.633 1.00 0.00 C ATOM 385 O ILE 56 -7.620 61.787 24.207 1.00 0.00 O ATOM 386 CB ILE 56 -5.732 59.336 25.135 1.00 0.00 C ATOM 387 CEN ILE 56 -5.691 58.251 25.232 1.00 0.00 C ATOM 388 H ILE 56 -3.501 60.539 24.662 1.00 0.00 H ATOM 389 N GLN 57 -5.934 62.504 25.512 1.00 0.00 N ATOM 390 CA GLN 57 -6.670 63.654 26.023 1.00 0.00 C ATOM 391 C GLN 57 -7.101 64.579 24.893 1.00 0.00 C ATOM 392 O GLN 57 -8.202 65.129 24.914 1.00 0.00 O ATOM 393 CB GLN 57 -5.817 64.431 27.031 1.00 0.00 C ATOM 394 CEN GLN 57 -5.527 64.709 28.729 1.00 0.00 C ATOM 395 H GLN 57 -4.991 62.339 25.835 1.00 0.00 H ATOM 396 N MET 58 -6.227 64.746 23.907 1.00 0.00 N ATOM 397 CA MET 58 -6.512 65.613 22.770 1.00 0.00 C ATOM 398 C MET 58 -7.545 64.985 21.842 1.00 0.00 C ATOM 399 O MET 58 -8.289 65.688 21.160 1.00 0.00 O ATOM 400 CB MET 58 -5.227 65.916 22.001 1.00 0.00 C ATOM 401 CEN MET 58 -4.082 67.198 21.649 1.00 0.00 C ATOM 402 H MET 58 -5.342 64.261 23.945 1.00 0.00 H ATOM 403 N LEU 59 -7.585 63.658 21.823 1.00 0.00 N ATOM 404 CA LEU 59 -8.518 62.931 20.971 1.00 0.00 C ATOM 405 C LEU 59 -9.893 62.833 21.620 1.00 0.00 C ATOM 406 O LEU 59 -10.893 62.583 20.946 1.00 0.00 O ATOM 407 CB LEU 59 -7.973 61.531 20.660 1.00 0.00 C ATOM 408 CEN LEU 59 -7.322 60.919 19.406 1.00 0.00 C ATOM 409 H LEU 59 -6.951 63.137 22.414 1.00 0.00 H ATOM 410 N GLN 60 -9.938 63.029 22.933 1.00 0.00 N ATOM 411 CA GLN 60 -11.173 62.869 23.691 1.00 0.00 C ATOM 412 C GLN 60 -12.315 63.651 23.055 1.00 0.00 C ATOM 413 O GLN 60 -13.432 63.148 22.931 1.00 0.00 O ATOM 414 CB GLN 60 -10.977 63.324 25.139 1.00 0.00 C ATOM 415 CEN GLN 60 -10.695 62.781 26.773 1.00 0.00 C ATOM 416 H GLN 60 -9.094 63.298 23.420 1.00 0.00 H ATOM 417 N ASN 61 -12.029 64.885 22.654 1.00 0.00 N ATOM 418 CA ASN 61 -13.040 65.752 22.062 1.00 0.00 C ATOM 419 C ASN 61 -13.735 65.069 20.892 1.00 0.00 C ATOM 420 O ASN 61 -14.950 64.872 20.907 1.00 0.00 O ATOM 421 CB ASN 61 -12.446 67.077 21.619 1.00 0.00 C ATOM 422 CEN ASN 61 -12.302 68.040 22.012 1.00 0.00 C ATOM 423 H ASN 61 -11.086 65.230 22.762 1.00 0.00 H ATOM 424 N GLU 62 -12.956 64.710 19.876 1.00 0.00 N ATOM 425 CA GLU 62 -13.500 64.077 18.681 1.00 0.00 C ATOM 426 C GLU 62 -13.812 62.606 18.930 1.00 0.00 C ATOM 427 O GLU 62 -14.770 62.063 18.381 1.00 0.00 O ATOM 428 CB GLU 62 -12.525 64.216 17.510 1.00 0.00 C ATOM 429 CEN GLU 62 -12.034 65.009 16.084 1.00 0.00 C ATOM 430 H GLU 62 -11.963 64.881 19.934 1.00 0.00 H ATOM 431 N LEU 63 -12.997 61.967 19.762 1.00 0.00 N ATOM 432 CA LEU 63 -13.177 60.555 20.076 1.00 0.00 C ATOM 433 C LEU 63 -14.486 60.320 20.820 1.00 0.00 C ATOM 434 O LEU 63 -15.232 59.394 20.504 1.00 0.00 O ATOM 435 CB LEU 63 -11.992 60.041 20.904 1.00 0.00 C ATOM 436 CEN LEU 63 -10.774 59.167 20.553 1.00 0.00 C ATOM 437 H LEU 63 -12.232 62.472 20.186 1.00 0.00 H ATOM 438 N ASP 64 -14.757 61.162 21.811 1.00 0.00 N ATOM 439 CA ASP 64 -15.976 61.047 22.603 1.00 0.00 C ATOM 440 C ASP 64 -17.214 61.254 21.741 1.00 0.00 C ATOM 441 O ASP 64 -18.230 60.583 21.924 1.00 0.00 O ATOM 442 CB ASP 64 -15.964 62.053 23.756 1.00 0.00 C ATOM 443 CEN ASP 64 -15.749 62.104 24.750 1.00 0.00 C ATOM 444 H ASP 64 -14.102 61.902 22.021 1.00 0.00 H ATOM 445 N LYS 65 -17.123 62.187 20.798 1.00 0.00 N ATOM 446 CA LYS 65 -18.209 62.433 19.856 1.00 0.00 C ATOM 447 C LYS 65 -18.497 61.197 19.013 1.00 0.00 C ATOM 448 O LYS 65 -19.654 60.823 18.819 1.00 0.00 O ATOM 449 CB LYS 65 -17.876 63.621 18.952 1.00 0.00 C ATOM 450 CEN LYS 65 -18.168 65.657 18.458 1.00 0.00 C ATOM 451 H LYS 65 -16.281 62.740 20.733 1.00 0.00 H ATOM 452 N TYR 66 -17.440 60.569 18.513 1.00 0.00 N ATOM 453 CA TYR 66 -17.576 59.367 17.698 1.00 0.00 C ATOM 454 C TYR 66 -18.264 58.252 18.473 1.00 0.00 C ATOM 455 O TYR 66 -19.154 57.579 17.953 1.00 0.00 O ATOM 456 CB TYR 66 -16.206 58.896 17.205 1.00 0.00 C ATOM 457 CEN TYR 66 -15.194 58.956 15.777 1.00 0.00 C ATOM 458 H TYR 66 -16.517 60.932 18.703 1.00 0.00 H TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 244 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 37.19 91.7 96 100.0 96 ARMSMC SECONDARY STRUCTURE . . 26.41 94.6 92 100.0 92 ARMSMC SURFACE . . . . . . . . 37.19 91.7 96 100.0 96 ARMSMC BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 46 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 46 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 44 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 46 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 45 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 33 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 43 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 45 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 22 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 16 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 21 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 22 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 7 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 7 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 6 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 7 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 19.29 (Number of atoms: 49) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 19.29 49 100.0 49 CRMSCA CRN = ALL/NP . . . . . 0.3937 CRMSCA SECONDARY STRUCTURE . . 17.74 46 100.0 46 CRMSCA SURFACE . . . . . . . . 19.29 49 100.0 49 CRMSCA BURIED . . . . . . . . 0.00 0 0.0 0 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 19.21 244 100.0 244 CRMSMC SECONDARY STRUCTURE . . 17.77 230 100.0 230 CRMSMC SURFACE . . . . . . . . 19.21 244 100.0 244 CRMSMC BURIED . . . . . . . . 0.00 0 0.0 0 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 19.32 48 21.7 221 CRMSSC RELIABLE SIDE CHAINS . 19.32 48 25.9 185 CRMSSC SECONDARY STRUCTURE . . 18.20 46 22.3 206 CRMSSC SURFACE . . . . . . . . 19.32 48 21.7 221 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 0 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 19.21 244 58.5 417 CRMSALL SECONDARY STRUCTURE . . 17.77 230 59.0 390 CRMSALL SURFACE . . . . . . . . 19.21 244 58.5 417 CRMSALL BURIED . . . . . . . . 0.00 0 0.0 0 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 17.502 1.000 0.500 49 100.0 49 ERRCA SECONDARY STRUCTURE . . 16.338 1.000 0.500 46 100.0 46 ERRCA SURFACE . . . . . . . . 17.502 1.000 0.500 49 100.0 49 ERRCA BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 0 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 17.440 1.000 0.500 244 100.0 244 ERRMC SECONDARY STRUCTURE . . 16.359 1.000 0.500 230 100.0 230 ERRMC SURFACE . . . . . . . . 17.440 1.000 0.500 244 100.0 244 ERRMC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 0 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 17.588 1.000 0.500 48 21.7 221 ERRSC RELIABLE SIDE CHAINS . 17.588 1.000 0.500 48 25.9 185 ERRSC SECONDARY STRUCTURE . . 16.764 1.000 0.500 46 22.3 206 ERRSC SURFACE . . . . . . . . 17.588 1.000 0.500 48 21.7 221 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 0 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 17.440 1.000 0.500 244 58.5 417 ERRALL SECONDARY STRUCTURE . . 16.359 1.000 0.500 230 59.0 390 ERRALL SURFACE . . . . . . . . 17.440 1.000 0.500 244 58.5 417 ERRALL BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 0 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 0 8 49 49 DISTCA CA (P) 0.00 0.00 0.00 0.00 16.33 49 DISTCA CA (RMS) 0.00 0.00 0.00 0.00 9.14 DISTCA ALL (N) 0 0 0 0 42 244 417 DISTALL ALL (P) 0.00 0.00 0.00 0.00 10.07 417 DISTALL ALL (RMS) 0.00 0.00 0.00 0.00 9.17 DISTALL END of the results output