####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 84 ( 570), selected 84 , name T0604TS042_1_3 # Molecule2: number of CA atoms 534 ( 4060), selected 84 , name T0604.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0604TS042_1_3.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 35 386 - 420 4.97 17.03 LCS_AVERAGE: 5.53 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 391 - 413 1.87 17.95 LONGEST_CONTINUOUS_SEGMENT: 23 394 - 416 1.84 18.41 LCS_AVERAGE: 2.77 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 395 - 411 0.84 17.90 LCS_AVERAGE: 1.87 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 84 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT P 386 P 386 4 4 35 3 3 4 4 4 4 7 8 11 12 14 17 27 28 32 33 36 41 44 46 LCS_GDT E 387 E 387 4 4 35 3 3 4 4 4 4 5 7 8 8 24 25 27 29 34 36 37 39 43 46 LCS_GDT V 388 V 388 4 5 35 3 3 10 15 18 20 21 21 22 24 24 25 30 32 35 37 38 41 44 46 LCS_GDT D 389 D 389 4 6 35 3 3 5 5 6 7 8 9 17 22 25 27 30 32 36 38 38 44 46 48 LCS_GDT Y 390 Y 390 4 7 35 3 3 5 5 6 7 9 14 21 25 29 33 35 38 40 41 43 44 46 48 LCS_GDT P 391 P 391 7 23 35 3 6 8 14 21 25 27 28 29 30 32 33 36 38 40 41 43 44 46 48 LCS_GDT G 392 G 392 7 23 35 3 6 11 16 21 25 27 28 29 30 32 33 36 38 40 41 43 44 46 48 LCS_GDT D 393 D 393 7 23 35 4 6 11 16 20 25 27 28 29 30 32 33 36 38 40 41 43 44 46 48 LCS_GDT P 394 P 394 15 23 35 4 6 9 16 20 25 27 28 29 30 32 33 36 38 40 41 43 44 46 48 LCS_GDT L 395 L 395 17 23 35 12 15 17 19 21 25 27 28 29 30 32 33 36 38 40 41 43 44 46 48 LCS_GDT A 396 A 396 17 23 35 12 15 17 19 21 25 27 28 29 30 32 33 36 38 40 41 43 44 46 48 LCS_GDT G 397 G 397 17 23 35 12 15 17 19 21 25 27 28 29 30 32 33 36 38 40 41 43 44 46 48 LCS_GDT I 398 I 398 17 23 35 12 15 17 19 21 25 27 28 29 30 32 33 36 38 40 41 43 44 46 48 LCS_GDT R 399 R 399 17 23 35 12 15 17 19 21 25 27 28 29 30 32 33 36 38 40 41 43 44 46 48 LCS_GDT F 400 F 400 17 23 35 12 15 17 19 21 25 27 28 29 30 32 33 36 38 40 41 43 44 46 48 LCS_GDT Q 401 Q 401 17 23 35 12 15 17 19 21 25 27 28 29 30 32 33 36 38 40 41 43 44 46 48 LCS_GDT R 402 R 402 17 23 35 12 15 17 19 21 25 27 28 29 30 32 33 36 38 40 41 43 44 46 48 LCS_GDT E 403 E 403 17 23 35 12 15 17 19 21 25 27 28 29 30 32 33 36 38 40 41 43 44 46 48 LCS_GDT L 404 L 404 17 23 35 12 15 17 19 21 25 27 28 29 30 32 33 36 38 40 41 43 44 46 48 LCS_GDT E 405 E 405 17 23 35 12 15 17 19 21 25 27 28 29 30 32 33 36 38 40 41 43 44 46 48 LCS_GDT S 406 S 406 17 23 35 6 15 17 19 21 25 27 28 29 30 32 33 36 38 40 41 43 44 46 48 LCS_GDT N 407 N 407 17 23 35 12 15 17 19 21 25 27 28 29 30 32 33 36 38 40 41 43 44 46 48 LCS_GDT A 408 A 408 17 23 35 6 15 17 19 21 25 27 28 29 30 32 33 36 38 40 41 43 44 46 48 LCS_GDT Y 409 Y 409 17 23 35 5 13 17 19 21 25 27 28 29 30 32 33 36 38 40 41 43 44 46 48 LCS_GDT K 410 K 410 17 23 35 5 15 17 19 21 25 27 28 29 30 32 33 36 38 40 41 43 44 46 48 LCS_GDT L 411 L 411 17 23 35 5 11 17 19 21 25 27 28 29 30 32 33 36 38 40 41 43 44 46 48 LCS_GDT G 412 G 412 16 23 35 5 9 15 19 21 25 27 28 29 30 32 33 36 38 40 41 43 44 46 48 LCS_GDT G 413 G 413 13 23 35 5 9 15 19 21 25 27 28 29 30 32 33 36 38 40 41 43 44 46 48 LCS_GDT E 414 E 414 11 23 35 4 8 11 17 21 22 23 23 27 30 32 33 36 38 40 41 43 44 46 48 LCS_GDT N 415 N 415 9 23 35 4 6 10 12 18 20 23 23 24 25 30 33 36 38 40 41 43 44 46 48 LCS_GDT Y 416 Y 416 9 23 35 3 8 12 18 21 22 23 23 25 28 30 33 36 38 40 41 43 44 46 48 LCS_GDT D 417 D 417 4 7 35 4 4 4 5 9 12 19 22 27 30 32 33 36 38 40 41 43 44 46 48 LCS_GDT A 418 A 418 4 7 35 4 4 5 7 10 12 15 19 24 26 29 33 36 38 40 41 43 44 46 48 LCS_GDT P 419 P 419 4 7 35 4 4 5 7 10 12 13 17 19 23 27 29 34 38 40 41 43 44 46 48 LCS_GDT A 420 A 420 4 7 35 4 4 5 7 10 12 13 17 19 22 26 29 32 37 38 39 43 44 46 48 LCS_GDT Q 421 Q 421 3 7 33 3 3 4 5 9 12 13 17 18 21 22 23 26 27 30 32 35 38 41 43 LCS_GDT K 422 K 422 8 9 28 6 8 8 8 10 12 13 17 18 21 22 23 25 27 30 31 37 38 41 43 LCS_GDT I 423 I 423 8 9 28 6 8 8 8 8 9 11 12 12 19 20 22 23 24 26 30 31 37 41 41 LCS_GDT G 424 G 424 8 9 28 5 8 8 8 8 9 11 12 12 14 14 17 23 24 25 26 30 31 35 36 LCS_GDT D 425 D 425 8 9 28 6 8 8 8 8 9 11 15 18 20 22 22 24 25 26 29 31 32 35 38 LCS_GDT F 426 F 426 8 9 28 6 8 8 8 10 12 13 17 18 21 22 23 24 26 30 30 34 38 41 42 LCS_GDT L 427 L 427 8 9 28 6 8 8 8 8 11 13 17 18 20 22 22 24 25 26 29 31 32 35 37 LCS_GDT K 428 K 428 8 9 28 6 8 8 8 8 9 11 14 18 20 22 22 23 25 26 29 31 32 35 38 LCS_GDT G 429 G 429 8 9 28 6 8 8 8 8 9 10 13 16 19 22 22 24 25 26 29 31 32 35 38 LCS_GDT R 430 R 430 3 9 28 3 3 3 5 5 7 11 12 12 15 18 21 23 24 26 29 31 32 35 38 LCS_GDT D 431 D 431 3 6 27 3 3 4 6 7 9 11 12 12 14 14 18 21 23 25 27 31 32 34 38 LCS_GDT P 432 P 432 3 5 18 3 3 4 4 5 7 9 11 11 13 14 18 21 23 26 29 31 32 34 36 LCS_GDT S 433 S 433 3 7 19 3 3 4 6 7 8 9 11 11 13 14 18 21 24 26 29 31 32 34 36 LCS_GDT Q 434 Q 434 6 7 19 3 5 6 6 7 8 10 11 12 13 14 16 21 23 25 27 28 31 34 36 LCS_GDT L 435 L 435 6 7 19 3 4 6 6 7 8 10 11 12 13 15 18 21 23 25 27 29 31 35 38 LCS_GDT G 436 G 436 6 7 19 3 5 6 6 7 8 10 11 12 12 15 18 21 23 25 27 29 31 35 38 LCS_GDT D 437 D 437 6 7 19 3 5 6 6 7 8 10 11 12 12 15 17 18 21 24 27 29 31 35 38 LCS_GDT V 438 V 438 6 7 19 3 5 6 6 7 8 10 11 12 12 15 17 19 21 25 27 29 31 35 38 LCS_GDT E 439 E 439 6 7 19 4 5 6 6 7 8 10 11 12 13 15 18 21 23 25 27 29 31 35 38 LCS_GDT P 440 P 440 5 7 19 4 5 5 6 7 8 10 13 14 16 16 18 21 23 25 27 29 31 35 38 LCS_GDT S 441 S 441 5 7 19 4 5 5 6 7 8 9 9 10 12 12 13 17 21 22 25 29 31 35 38 LCS_GDT F 442 F 442 5 8 27 4 5 6 6 7 8 9 13 17 20 21 23 24 25 26 27 29 31 35 38 LCS_GDT T 443 T 443 5 8 27 3 3 6 6 7 8 10 11 12 20 21 23 24 25 26 27 29 31 35 38 LCS_GDT P 444 P 444 5 8 27 3 4 6 6 7 8 10 11 12 19 21 23 25 26 27 32 33 34 35 38 LCS_GDT G 445 G 445 3 8 27 2 3 4 4 7 8 9 11 12 19 21 23 25 27 30 32 33 34 36 38 LCS_GDT I 446 I 446 4 8 27 2 4 6 6 7 8 10 11 16 19 21 23 25 27 30 32 33 34 36 38 LCS_GDT K 447 K 447 4 8 27 3 4 6 6 7 8 10 11 12 13 17 20 23 27 30 32 34 37 43 47 LCS_GDT L 448 L 448 4 8 27 3 4 6 6 7 8 9 9 12 18 20 22 26 26 35 38 41 44 45 48 LCS_GDT T 449 T 449 4 8 27 3 4 5 6 9 9 11 15 18 20 21 23 30 32 36 39 43 44 46 48 LCS_GDT D 450 D 450 6 19 27 5 5 12 18 18 19 19 19 19 20 25 27 30 34 36 39 43 44 46 48 LCS_GDT L 451 L 451 6 19 27 5 5 14 18 18 19 19 19 23 24 27 29 34 36 38 40 43 44 46 48 LCS_GDT S 452 S 452 10 19 27 5 5 10 18 18 19 19 19 20 25 29 33 35 38 39 41 43 44 46 48 LCS_GDT K 453 K 453 15 19 27 5 7 14 18 18 19 19 19 19 19 21 23 25 31 36 39 43 44 46 48 LCS_GDT A 454 A 454 15 19 27 5 10 14 18 18 19 19 19 19 20 21 23 26 27 36 39 43 44 46 48 LCS_GDT L 455 L 455 15 19 27 3 10 14 18 18 19 19 19 20 26 30 33 36 38 40 41 43 44 46 48 LCS_GDT P 456 P 456 15 19 27 7 10 14 18 18 19 19 19 19 20 21 33 36 38 40 41 43 44 46 48 LCS_GDT P 457 P 457 15 19 27 7 10 14 18 18 19 19 19 19 30 32 33 36 38 40 41 43 44 46 48 LCS_GDT F 458 F 458 15 19 27 7 10 14 18 18 19 19 19 27 30 32 33 36 38 40 41 42 44 46 48 LCS_GDT A 459 A 459 15 19 27 7 10 14 18 20 25 27 28 29 30 32 33 36 38 40 41 43 44 46 48 LCS_GDT V 460 V 460 15 19 27 7 10 14 18 21 25 27 28 29 30 32 33 36 38 40 41 43 44 46 48 LCS_GDT E 461 E 461 15 19 27 7 10 14 18 21 25 27 28 29 30 32 33 36 38 40 41 43 44 46 48 LCS_GDT A 462 A 462 15 19 27 4 10 14 18 18 19 27 28 29 29 32 33 35 37 40 41 42 43 46 48 LCS_GDT I 463 I 463 15 19 27 7 10 14 18 18 22 27 28 29 29 32 33 36 38 40 41 43 44 46 48 LCS_GDT R 464 R 464 15 19 27 4 10 14 18 18 19 19 28 29 29 31 33 35 37 40 41 42 44 46 48 LCS_GDT E 465 E 465 15 19 27 4 8 14 18 18 19 19 19 19 20 21 23 25 30 31 35 36 40 41 43 LCS_GDT A 466 A 466 15 19 27 4 10 14 18 18 19 19 19 19 20 21 23 25 27 31 33 36 38 41 42 LCS_GDT I 467 I 467 15 19 27 4 7 14 18 18 19 19 19 19 20 21 23 25 27 30 33 36 38 40 43 LCS_GDT P 468 P 468 9 19 27 4 7 8 16 18 19 19 19 19 19 21 23 23 24 25 27 32 33 34 35 LCS_GDT A 469 A 469 3 3 27 3 3 3 3 3 4 5 7 10 11 14 17 19 22 23 24 25 26 29 29 LCS_AVERAGE LCS_A: 3.39 ( 1.87 2.77 5.53 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 12 15 17 19 21 25 27 28 29 30 32 33 36 38 40 41 43 44 46 48 GDT PERCENT_AT 2.25 2.81 3.18 3.56 3.93 4.68 5.06 5.24 5.43 5.62 5.99 6.18 6.74 7.12 7.49 7.68 8.05 8.24 8.61 8.99 GDT RMS_LOCAL 0.31 0.63 0.84 1.19 1.52 1.99 2.13 2.21 2.32 2.81 2.94 3.05 3.77 4.12 4.27 4.48 5.34 5.21 5.45 5.93 GDT RMS_ALL_AT 18.42 18.09 17.90 17.65 17.99 18.18 18.34 18.24 18.23 18.07 18.19 18.17 17.73 17.50 17.63 17.47 16.38 16.84 16.84 16.38 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA P 386 P 386 12.557 2 0.651 0.614 15.000 0.000 0.000 LGA E 387 E 387 14.727 4 0.189 0.198 16.564 0.000 0.000 LGA V 388 V 388 15.031 2 0.588 0.575 15.344 0.000 0.000 LGA D 389 D 389 14.707 3 0.031 0.041 17.350 0.000 0.000 LGA Y 390 Y 390 9.445 7 0.275 0.353 10.945 7.976 2.659 LGA P 391 P 391 2.600 2 0.088 0.109 5.178 46.310 31.769 LGA G 392 G 392 1.732 0 0.037 0.037 2.657 71.310 71.310 LGA D 393 D 393 2.287 3 0.021 0.036 2.317 66.786 41.488 LGA P 394 P 394 2.919 2 0.046 0.044 3.698 62.976 42.177 LGA L 395 L 395 0.396 3 0.280 0.294 1.346 95.357 57.857 LGA A 396 A 396 1.419 0 0.025 0.031 1.704 77.143 76.286 LGA G 397 G 397 1.731 0 0.060 0.060 1.731 77.143 77.143 LGA I 398 I 398 0.653 3 0.060 0.063 1.228 92.857 56.607 LGA R 399 R 399 1.203 6 0.053 0.049 1.693 81.548 36.277 LGA F 400 F 400 2.176 6 0.021 0.022 2.639 68.810 30.216 LGA Q 401 Q 401 1.218 4 0.092 0.100 1.440 88.333 48.307 LGA R 402 R 402 0.891 6 0.021 0.025 1.717 86.190 38.745 LGA E 403 E 403 2.523 4 0.049 0.063 3.201 62.976 33.545 LGA L 404 L 404 2.000 3 0.081 0.082 2.179 72.976 44.583 LGA E 405 E 405 0.435 4 0.022 0.030 1.179 90.714 50.370 LGA S 406 S 406 2.383 1 0.050 0.055 3.290 66.786 52.857 LGA N 407 N 407 2.416 3 0.099 0.098 3.237 70.952 41.726 LGA A 408 A 408 1.013 0 0.042 0.048 1.559 81.548 81.524 LGA Y 409 Y 409 2.118 7 0.100 0.110 3.239 72.976 28.492 LGA K 410 K 410 1.912 4 0.067 0.071 3.074 84.048 42.910 LGA L 411 L 411 2.056 3 0.060 0.075 3.367 65.238 38.869 LGA G 412 G 412 3.626 0 0.060 0.060 4.708 45.714 45.714 LGA G 413 G 413 3.163 0 0.028 0.028 6.084 38.929 38.929 LGA E 414 E 414 7.160 4 0.118 0.113 10.307 9.762 4.656 LGA N 415 N 415 10.009 3 0.063 0.068 11.849 1.190 0.595 LGA Y 416 Y 416 8.628 7 0.638 0.578 11.054 10.119 3.373 LGA D 417 D 417 6.198 3 0.689 0.627 7.360 16.190 9.345 LGA A 418 A 418 7.160 0 0.044 0.060 8.457 8.214 8.571 LGA P 419 P 419 9.276 2 0.052 0.090 9.728 2.024 1.361 LGA A 420 A 420 11.255 0 0.068 0.077 14.992 0.000 0.000 LGA Q 421 Q 421 16.323 4 0.660 0.624 17.311 0.000 0.000 LGA K 422 K 422 18.329 4 0.635 0.605 18.910 0.000 0.000 LGA I 423 I 423 17.438 3 0.071 0.074 19.783 0.000 0.000 LGA G 424 G 424 23.227 0 0.081 0.081 25.058 0.000 0.000 LGA D 425 D 425 24.428 3 0.111 0.130 25.115 0.000 0.000 LGA F 426 F 426 20.015 6 0.029 0.032 21.173 0.000 0.000 LGA L 427 L 427 22.191 3 0.040 0.047 24.864 0.000 0.000 LGA K 428 K 428 27.993 4 0.104 0.112 29.899 0.000 0.000 LGA G 429 G 429 27.151 0 0.657 0.657 29.054 0.000 0.000 LGA R 430 R 430 33.049 6 0.331 0.311 35.529 0.000 0.000 LGA D 431 D 431 30.483 3 0.385 0.367 30.927 0.000 0.000 LGA P 432 P 432 32.167 2 0.678 0.638 35.078 0.000 0.000 LGA S 433 S 433 34.042 1 0.125 0.187 34.042 0.000 0.000 LGA Q 434 Q 434 36.508 4 0.667 0.623 36.851 0.000 0.000 LGA L 435 L 435 36.477 3 0.107 0.153 40.526 0.000 0.000 LGA G 436 G 436 41.211 0 0.152 0.152 41.664 0.000 0.000 LGA D 437 D 437 44.215 3 0.052 0.053 46.642 0.000 0.000 LGA V 438 V 438 42.252 2 0.604 0.549 42.785 0.000 0.000 LGA E 439 E 439 38.302 4 0.233 0.297 39.960 0.000 0.000 LGA P 440 P 440 33.053 2 0.020 0.021 35.072 0.000 0.000 LGA S 441 S 441 30.939 1 0.081 0.084 31.623 0.000 0.000 LGA F 442 F 442 25.710 6 0.106 0.140 28.257 0.000 0.000 LGA T 443 T 443 27.640 2 0.115 0.156 30.634 0.000 0.000 LGA P 444 P 444 26.134 2 0.580 0.597 28.703 0.000 0.000 LGA G 445 G 445 24.946 0 0.683 0.683 24.946 0.000 0.000 LGA I 446 I 446 20.890 3 0.109 0.149 22.354 0.000 0.000 LGA K 447 K 447 17.642 4 0.224 0.311 18.807 0.000 0.000 LGA L 448 L 448 16.747 3 0.631 0.593 18.428 0.000 0.000 LGA T 449 T 449 15.616 2 0.584 0.583 16.807 0.000 0.000 LGA D 450 D 450 14.262 3 0.487 0.448 14.262 0.000 0.000 LGA L 451 L 451 12.278 3 0.070 0.071 12.929 0.000 0.000 LGA S 452 S 452 11.606 1 0.091 0.090 12.320 0.000 0.000 LGA K 453 K 453 13.826 4 0.027 0.028 14.677 0.000 0.000 LGA A 454 A 454 13.516 0 0.032 0.030 13.853 0.000 0.000 LGA L 455 L 455 8.968 3 0.041 0.061 10.489 2.143 2.321 LGA P 456 P 456 8.140 2 0.021 0.038 8.140 12.262 8.027 LGA P 457 P 457 6.558 2 0.033 0.033 7.519 19.048 11.905 LGA F 458 F 458 5.471 6 0.080 0.094 6.349 32.619 13.420 LGA A 459 A 459 2.885 0 0.015 0.013 4.018 60.119 56.762 LGA V 460 V 460 2.683 2 0.052 0.055 3.824 69.286 45.782 LGA E 461 E 461 1.587 4 0.076 0.078 3.272 68.929 36.190 LGA A 462 A 462 3.307 0 0.059 0.068 4.604 49.048 47.905 LGA I 463 I 463 3.428 3 0.102 0.107 6.312 40.833 25.833 LGA R 464 R 464 4.546 6 0.092 0.095 7.851 24.762 13.550 LGA E 465 E 465 8.159 4 0.069 0.080 11.177 5.833 2.910 LGA A 466 A 466 9.493 0 0.027 0.027 12.455 1.548 2.190 LGA I 467 I 467 11.392 3 0.596 0.572 13.943 0.119 0.060 LGA P 468 P 468 15.619 2 0.099 0.104 19.329 0.000 0.000 LGA A 469 A 469 20.928 0 0.183 0.175 22.641 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 84 336 336 100.00 634 412 64.98 534 SUMMARY(RMSD_GDC): 14.412 14.368 14.433 3.951 2.631 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 84 534 4.0 28 2.21 4.822 4.383 1.211 LGA_LOCAL RMSD: 2.211 Number of atoms: 28 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 18.236 Number of assigned atoms: 84 Std_ASGN_ATOMS RMSD: 14.412 Standard rmsd on all 84 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.762324 * X + -0.297298 * Y + 0.574870 * Z + -0.236033 Y_new = 0.563659 * X + -0.741482 * Y + 0.363995 * Z + 39.760006 Z_new = 0.318041 * X + 0.601513 * Y + 0.732825 * Z + 77.998695 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.504913 -0.323662 0.687304 [DEG: 143.5209 -18.5445 39.3796 ] ZXZ: 2.135255 0.748332 0.486370 [DEG: 122.3411 42.8763 27.8670 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0604TS042_1_3 REMARK 2: T0604.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0604TS042_1_3.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 84 534 4.0 28 2.21 4.383 14.41 REMARK ---------------------------------------------------------- MOLECULE T0604TS042_1_3 REMARK PARENT number 3 PFRMAT TS TARGET T0604 PARENT N/A ATOM 1 N PRO 386 -0.236 39.760 77.999 1.00 0.00 ATOM 2 CA PRO 386 -1.348 40.582 78.462 1.00 0.00 ATOM 3 C PRO 386 -2.190 39.839 79.492 1.00 0.00 ATOM 4 O PRO 386 -2.732 40.443 80.417 1.00 0.00 ATOM 5 CB PRO 386 -2.141 40.897 77.183 1.00 0.00 ATOM 6 CEN PRO 386 -0.919 39.860 76.398 1.00 0.00 ATOM 7 N GLU 387 -2.296 38.525 79.326 1.00 0.00 ATOM 8 CA GLU 387 -3.110 37.704 80.213 1.00 0.00 ATOM 9 C GLU 387 -2.490 37.613 81.601 1.00 0.00 ATOM 10 O GLU 387 -3.194 37.434 82.595 1.00 0.00 ATOM 11 CB GLU 387 -3.294 36.302 79.628 1.00 0.00 ATOM 12 CEN GLU 387 -4.239 35.173 78.769 1.00 0.00 ATOM 13 H GLU 387 -1.799 38.084 78.565 1.00 0.00 ATOM 14 N VAL 388 -1.169 37.738 81.665 1.00 0.00 ATOM 15 CA VAL 388 -0.423 37.392 82.868 1.00 0.00 ATOM 16 C VAL 388 -0.602 38.450 83.950 1.00 0.00 ATOM 17 O VAL 388 -0.982 39.586 83.665 1.00 0.00 ATOM 18 CB VAL 388 1.080 37.223 82.573 1.00 0.00 ATOM 19 CEN VAL 388 1.586 36.759 82.524 1.00 0.00 ATOM 20 H VAL 388 -0.669 38.080 80.856 1.00 0.00 ATOM 21 N ASP 389 -0.328 38.070 85.193 1.00 0.00 ATOM 22 CA ASP 389 -0.561 38.949 86.332 1.00 0.00 ATOM 23 C ASP 389 0.745 39.533 86.855 1.00 0.00 ATOM 24 O ASP 389 0.746 40.353 87.773 1.00 0.00 ATOM 25 CB ASP 389 -1.286 38.196 87.451 1.00 0.00 ATOM 26 CEN ASP 389 -2.224 38.056 87.823 1.00 0.00 ATOM 27 H ASP 389 0.053 37.147 85.353 1.00 0.00 ATOM 28 N TYR 390 1.856 39.106 86.264 1.00 0.00 ATOM 29 CA TYR 390 3.174 39.549 86.701 1.00 0.00 ATOM 30 C TYR 390 3.886 40.326 85.600 1.00 0.00 ATOM 31 O TYR 390 4.310 39.753 84.597 1.00 0.00 ATOM 32 CB TYR 390 4.026 38.353 87.133 1.00 0.00 ATOM 33 CEN TYR 390 4.548 37.525 88.585 1.00 0.00 ATOM 34 H TYR 390 1.785 38.456 85.494 1.00 0.00 ATOM 35 N PRO 391 4.014 41.634 85.794 1.00 0.00 ATOM 36 CA PRO 391 4.670 42.493 84.817 1.00 0.00 ATOM 37 C PRO 391 6.165 42.209 84.748 1.00 0.00 ATOM 38 O PRO 391 6.796 41.905 85.760 1.00 0.00 ATOM 39 CB PRO 391 4.375 43.920 85.310 1.00 0.00 ATOM 40 CEN PRO 391 3.561 43.078 86.659 1.00 0.00 ATOM 41 N GLY 392 6.727 42.308 83.548 1.00 0.00 ATOM 42 CA GLY 392 8.164 42.149 83.360 1.00 0.00 ATOM 43 C GLY 392 8.571 40.684 83.449 1.00 0.00 ATOM 44 O GLY 392 9.755 40.364 83.558 1.00 0.00 ATOM 45 CEN GLY 392 8.165 42.148 83.359 1.00 0.00 ATOM 46 H GLY 392 6.144 42.500 82.746 1.00 0.00 ATOM 47 N ASP 393 7.583 39.796 83.399 1.00 0.00 ATOM 48 CA ASP 393 7.840 38.361 83.438 1.00 0.00 ATOM 49 C ASP 393 8.248 37.837 82.067 1.00 0.00 ATOM 50 O ASP 393 7.798 38.343 81.039 1.00 0.00 ATOM 51 CB ASP 393 6.607 37.609 83.943 1.00 0.00 ATOM 52 CEN ASP 393 6.231 37.202 84.799 1.00 0.00 ATOM 53 H ASP 393 6.630 40.123 83.333 1.00 0.00 ATOM 54 N PRO 394 9.103 36.820 82.059 1.00 0.00 ATOM 55 CA PRO 394 9.641 36.282 80.815 1.00 0.00 ATOM 56 C PRO 394 8.545 35.638 79.975 1.00 0.00 ATOM 57 O PRO 394 8.583 35.687 78.745 1.00 0.00 ATOM 58 CB PRO 394 10.695 35.260 81.272 1.00 0.00 ATOM 59 CEN PRO 394 10.147 35.714 82.909 1.00 0.00 ATOM 60 N LEU 395 7.570 35.034 80.646 1.00 0.00 ATOM 61 CA LEU 395 6.470 34.365 79.961 1.00 0.00 ATOM 62 C LEU 395 5.542 35.373 79.294 1.00 0.00 ATOM 63 O LEU 395 5.180 35.219 78.127 1.00 0.00 ATOM 64 CB LEU 395 5.686 33.490 80.947 1.00 0.00 ATOM 65 CEN LEU 395 5.640 31.969 81.187 1.00 0.00 ATOM 66 H LEU 395 7.591 35.037 81.655 1.00 0.00 ATOM 67 N ALA 396 5.162 36.404 80.041 1.00 0.00 ATOM 68 CA ALA 396 4.287 37.447 79.519 1.00 0.00 ATOM 69 C ALA 396 4.904 38.125 78.302 1.00 0.00 ATOM 70 O ALA 396 4.196 38.530 77.379 1.00 0.00 ATOM 71 CB ALA 396 3.977 38.471 80.601 1.00 0.00 ATOM 72 CEN ALA 396 3.977 38.470 80.600 1.00 0.00 ATOM 73 H ALA 396 5.487 36.467 80.995 1.00 0.00 ATOM 74 N GLY 397 6.226 38.247 78.307 1.00 0.00 ATOM 75 CA GLY 397 6.942 38.871 77.201 1.00 0.00 ATOM 76 C GLY 397 6.820 38.043 75.928 1.00 0.00 ATOM 77 O GLY 397 6.427 38.553 74.879 1.00 0.00 ATOM 78 CEN GLY 397 6.942 38.872 77.200 1.00 0.00 ATOM 79 H GLY 397 6.750 37.899 79.098 1.00 0.00 ATOM 80 N ILE 398 7.158 36.762 76.028 1.00 0.00 ATOM 81 CA ILE 398 7.114 35.866 74.878 1.00 0.00 ATOM 82 C ILE 398 5.695 35.734 74.337 1.00 0.00 ATOM 83 O ILE 398 5.491 35.583 73.132 1.00 0.00 ATOM 84 CB ILE 398 7.651 34.467 75.231 1.00 0.00 ATOM 85 CEN ILE 398 8.545 33.850 75.316 1.00 0.00 ATOM 86 H ILE 398 7.453 36.399 76.923 1.00 0.00 ATOM 87 N ARG 399 4.718 35.792 75.235 1.00 0.00 ATOM 88 CA ARG 399 3.315 35.698 74.847 1.00 0.00 ATOM 89 C ARG 399 2.892 36.901 74.014 1.00 0.00 ATOM 90 O ARG 399 2.343 36.752 72.923 1.00 0.00 ATOM 91 CB ARG 399 2.399 35.501 76.046 1.00 0.00 ATOM 92 CEN ARG 399 0.999 34.388 77.764 1.00 0.00 ATOM 93 H ARG 399 4.951 35.903 76.211 1.00 0.00 ATOM 94 N PHE 400 3.151 38.096 74.536 1.00 0.00 ATOM 95 CA PHE 400 2.837 39.329 73.822 1.00 0.00 ATOM 96 C PHE 400 3.513 39.362 72.458 1.00 0.00 ATOM 97 O PHE 400 2.911 39.770 71.465 1.00 0.00 ATOM 98 CB PHE 400 3.258 40.546 74.648 1.00 0.00 ATOM 99 CEN PHE 400 2.591 41.606 75.626 1.00 0.00 ATOM 100 H PHE 400 3.575 38.152 75.451 1.00 0.00 ATOM 101 N GLN 401 4.769 38.929 72.415 1.00 0.00 ATOM 102 CA GLN 401 5.532 38.914 71.173 1.00 0.00 ATOM 103 C GLN 401 4.852 38.051 70.119 1.00 0.00 ATOM 104 O GLN 401 4.740 38.444 68.957 1.00 0.00 ATOM 105 CB GLN 401 6.953 38.402 71.422 1.00 0.00 ATOM 106 CEN GLN 401 8.615 38.882 71.652 1.00 0.00 ATOM 107 H GLN 401 5.207 38.603 73.265 1.00 0.00 ATOM 108 N ARG 402 4.398 36.871 70.531 1.00 0.00 ATOM 109 CA ARG 402 3.807 35.913 69.605 1.00 0.00 ATOM 110 C ARG 402 2.618 36.519 68.870 1.00 0.00 ATOM 111 O ARG 402 2.474 36.352 67.659 1.00 0.00 ATOM 112 CB ARG 402 3.430 34.609 70.292 1.00 0.00 ATOM 113 CEN ARG 402 3.563 32.272 71.113 1.00 0.00 ATOM 114 H ARG 402 4.466 36.633 71.509 1.00 0.00 ATOM 115 N GLU 403 1.768 37.223 69.610 1.00 0.00 ATOM 116 CA GLU 403 0.599 37.870 69.026 1.00 0.00 ATOM 117 C GLU 403 1.005 38.897 67.976 1.00 0.00 ATOM 118 O GLU 403 0.389 38.990 66.914 1.00 0.00 ATOM 119 CB GLU 403 -0.244 38.537 70.115 1.00 0.00 ATOM 120 CEN GLU 403 -1.584 38.512 71.168 1.00 0.00 ATOM 121 H GLU 403 1.936 37.312 70.602 1.00 0.00 ATOM 122 N LEU 404 2.044 39.668 68.280 1.00 0.00 ATOM 123 CA LEU 404 2.514 40.711 67.377 1.00 0.00 ATOM 124 C LEU 404 3.009 40.120 66.063 1.00 0.00 ATOM 125 O LEU 404 2.595 40.547 64.985 1.00 0.00 ATOM 126 CB LEU 404 3.626 41.529 68.045 1.00 0.00 ATOM 127 CEN LEU 404 3.654 42.933 68.679 1.00 0.00 ATOM 128 H LEU 404 2.520 39.526 69.160 1.00 0.00 ATOM 129 N GLU 405 3.895 39.135 66.159 1.00 0.00 ATOM 130 CA GLU 405 4.497 38.527 64.978 1.00 0.00 ATOM 131 C GLU 405 3.430 38.025 64.013 1.00 0.00 ATOM 132 O GLU 405 3.490 38.293 62.813 1.00 0.00 ATOM 133 CB GLU 405 5.423 37.378 65.380 1.00 0.00 ATOM 134 CEN GLU 405 6.991 36.784 65.691 1.00 0.00 ATOM 135 H GLU 405 4.159 38.799 67.074 1.00 0.00 ATOM 136 N SER 406 2.454 37.297 64.544 1.00 0.00 ATOM 137 CA SER 406 1.369 36.760 63.731 1.00 0.00 ATOM 138 C SER 406 0.492 37.875 63.176 1.00 0.00 ATOM 139 O SER 406 0.099 37.846 62.010 1.00 0.00 ATOM 140 CB SER 406 0.537 35.790 64.546 1.00 0.00 ATOM 141 CEN SER 406 0.286 35.574 64.978 1.00 0.00 ATOM 142 H SER 406 2.464 37.110 65.537 1.00 0.00 ATOM 143 N ASN 407 0.190 38.857 64.018 1.00 0.00 ATOM 144 CA ASN 407 -0.630 39.991 63.609 1.00 0.00 ATOM 145 C ASN 407 0.160 40.956 62.734 1.00 0.00 ATOM 146 O ASN 407 -0.411 41.686 61.925 1.00 0.00 ATOM 147 CB ASN 407 -1.204 40.723 64.809 1.00 0.00 ATOM 148 CEN ASN 407 -2.077 40.706 65.390 1.00 0.00 ATOM 149 H ASN 407 0.536 38.817 64.966 1.00 0.00 ATOM 150 N ALA 408 1.479 40.954 62.902 1.00 0.00 ATOM 151 CA ALA 408 2.336 41.938 62.251 1.00 0.00 ATOM 152 C ALA 408 2.293 41.790 60.736 1.00 0.00 ATOM 153 O ALA 408 2.206 42.779 60.008 1.00 0.00 ATOM 154 CB ALA 408 3.764 41.815 62.759 1.00 0.00 ATOM 155 CEN ALA 408 3.763 41.815 62.759 1.00 0.00 ATOM 156 H ALA 408 1.899 40.252 63.494 1.00 0.00 ATOM 157 N TYR 409 2.354 40.549 60.265 1.00 0.00 ATOM 158 CA TYR 409 2.331 40.269 58.835 1.00 0.00 ATOM 159 C TYR 409 0.957 40.554 58.241 1.00 0.00 ATOM 160 O TYR 409 0.847 41.095 57.141 1.00 0.00 ATOM 161 CB TYR 409 2.728 38.815 58.567 1.00 0.00 ATOM 162 CEN TYR 409 4.112 37.867 58.063 1.00 0.00 ATOM 163 H TYR 409 2.419 39.779 60.916 1.00 0.00 ATOM 164 N LYS 410 -0.087 40.186 58.975 1.00 0.00 ATOM 165 CA LYS 410 -1.455 40.363 58.504 1.00 0.00 ATOM 166 C LYS 410 -1.857 41.832 58.517 1.00 0.00 ATOM 167 O LYS 410 -2.429 42.338 57.552 1.00 0.00 ATOM 168 CB LYS 410 -2.426 39.545 59.358 1.00 0.00 ATOM 169 CEN LYS 410 -3.656 37.837 59.564 1.00 0.00 ATOM 170 H LYS 410 0.070 39.772 59.883 1.00 0.00 ATOM 171 N LEU 411 -1.553 42.513 59.617 1.00 0.00 ATOM 172 CA LEU 411 -1.949 43.906 59.789 1.00 0.00 ATOM 173 C LEU 411 -1.163 44.821 58.859 1.00 0.00 ATOM 174 O LEU 411 -1.649 45.877 58.456 1.00 0.00 ATOM 175 CB LEU 411 -1.755 44.336 61.249 1.00 0.00 ATOM 176 CEN LEU 411 -2.739 44.561 62.412 1.00 0.00 ATOM 177 H LEU 411 -1.035 42.054 60.352 1.00 0.00 ATOM 178 N GLY 412 0.053 44.409 58.521 1.00 0.00 ATOM 179 CA GLY 412 0.925 45.210 57.670 1.00 0.00 ATOM 180 C GLY 412 0.721 44.871 56.199 1.00 0.00 ATOM 181 O GLY 412 1.434 45.375 55.330 1.00 0.00 ATOM 182 CEN GLY 412 0.926 45.210 57.669 1.00 0.00 ATOM 183 H GLY 412 0.384 43.517 58.863 1.00 0.00 ATOM 184 N GLY 413 -0.257 44.015 55.924 1.00 0.00 ATOM 185 CA GLY 413 -0.570 43.622 54.555 1.00 0.00 ATOM 186 C GLY 413 0.627 42.961 53.885 1.00 0.00 ATOM 187 O GLY 413 0.811 43.070 52.672 1.00 0.00 ATOM 188 CEN GLY 413 -0.570 43.622 54.554 1.00 0.00 ATOM 189 H GLY 413 -0.798 43.626 56.684 1.00 0.00 ATOM 190 N GLU 414 1.440 42.273 54.680 1.00 0.00 ATOM 191 CA GLU 414 2.584 41.538 54.157 1.00 0.00 ATOM 192 C GLU 414 3.820 42.424 54.079 1.00 0.00 ATOM 193 O GLU 414 4.864 42.009 53.575 1.00 0.00 ATOM 194 CB GLU 414 2.264 40.962 52.775 1.00 0.00 ATOM 195 CEN GLU 414 1.789 39.652 51.795 1.00 0.00 ATOM 196 H GLU 414 1.261 42.261 55.674 1.00 0.00 ATOM 197 N ASN 415 3.698 43.647 54.584 1.00 0.00 ATOM 198 CA ASN 415 4.810 44.590 54.586 1.00 0.00 ATOM 199 C ASN 415 5.988 44.052 55.387 1.00 0.00 ATOM 200 O ASN 415 7.146 44.311 55.057 1.00 0.00 ATOM 201 CB ASN 415 4.387 45.946 55.121 1.00 0.00 ATOM 202 CEN ASN 415 4.027 46.858 54.746 1.00 0.00 ATOM 203 H ASN 415 2.811 43.930 54.977 1.00 0.00 ATOM 204 N TYR 416 5.687 43.301 56.440 1.00 0.00 ATOM 205 CA TYR 416 6.720 42.680 57.260 1.00 0.00 ATOM 206 C TYR 416 6.325 41.267 57.669 1.00 0.00 ATOM 207 O TYR 416 5.159 40.998 57.955 1.00 0.00 ATOM 208 CB TYR 416 6.999 43.528 58.503 1.00 0.00 ATOM 209 CEN TYR 416 8.152 44.702 59.103 1.00 0.00 ATOM 210 H TYR 416 4.717 43.157 56.681 1.00 0.00 ATOM 211 N ASP 417 7.304 40.368 57.694 1.00 0.00 ATOM 212 CA ASP 417 7.058 38.979 58.061 1.00 0.00 ATOM 213 C ASP 417 7.430 38.719 59.516 1.00 0.00 ATOM 214 O ASP 417 7.104 37.671 60.071 1.00 0.00 ATOM 215 CB ASP 417 7.839 38.035 57.143 1.00 0.00 ATOM 216 CEN ASP 417 7.707 37.465 56.309 1.00 0.00 ATOM 217 H ASP 417 8.242 40.655 57.453 1.00 0.00 ATOM 218 N ALA 418 8.113 39.681 60.127 1.00 0.00 ATOM 219 CA ALA 418 8.571 39.538 61.503 1.00 0.00 ATOM 220 C ALA 418 8.839 40.897 62.139 1.00 0.00 ATOM 221 O ALA 418 9.223 41.847 61.456 1.00 0.00 ATOM 222 CB ALA 418 9.818 38.668 61.559 1.00 0.00 ATOM 223 CEN ALA 418 9.818 38.670 61.560 1.00 0.00 ATOM 224 H ALA 418 8.319 40.532 59.625 1.00 0.00 ATOM 225 N PRO 419 8.631 40.983 63.449 1.00 0.00 ATOM 226 CA PRO 419 8.875 42.218 64.183 1.00 0.00 ATOM 227 C PRO 419 10.362 42.547 64.230 1.00 0.00 ATOM 228 O PRO 419 11.206 41.651 64.216 1.00 0.00 ATOM 229 CB PRO 419 8.299 41.944 65.582 1.00 0.00 ATOM 230 CEN PRO 419 7.959 40.324 64.914 1.00 0.00 ATOM 231 N ALA 420 10.676 43.837 64.286 1.00 0.00 ATOM 232 CA ALA 420 12.057 44.283 64.436 1.00 0.00 ATOM 233 C ALA 420 12.652 43.800 65.751 1.00 0.00 ATOM 234 O ALA 420 11.968 43.758 66.775 1.00 0.00 ATOM 235 CB ALA 420 12.136 45.800 64.339 1.00 0.00 ATOM 236 CEN ALA 420 12.136 45.799 64.340 1.00 0.00 ATOM 237 H ALA 420 9.940 44.526 64.222 1.00 0.00 ATOM 238 N GLN 421 13.929 43.435 65.718 1.00 0.00 ATOM 239 CA GLN 421 14.580 42.821 66.870 1.00 0.00 ATOM 240 C GLN 421 14.554 43.748 68.077 1.00 0.00 ATOM 241 O GLN 421 14.458 43.296 69.218 1.00 0.00 ATOM 242 CB GLN 421 16.028 42.453 66.533 1.00 0.00 ATOM 243 CEN GLN 421 17.091 41.145 66.081 1.00 0.00 ATOM 244 H GLN 421 14.463 43.587 64.874 1.00 0.00 ATOM 245 N LYS 422 14.641 45.049 67.820 1.00 0.00 ATOM 246 CA LYS 422 14.620 46.044 68.885 1.00 0.00 ATOM 247 C LYS 422 13.280 46.044 69.613 1.00 0.00 ATOM 248 O LYS 422 13.221 46.265 70.823 1.00 0.00 ATOM 249 CB LYS 422 14.913 47.437 68.324 1.00 0.00 ATOM 250 CEN LYS 422 16.275 49.034 68.065 1.00 0.00 ATOM 251 H LYS 422 14.723 45.356 66.862 1.00 0.00 ATOM 252 N ILE 423 12.209 45.793 68.869 1.00 0.00 ATOM 253 CA ILE 423 10.874 45.711 69.451 1.00 0.00 ATOM 254 C ILE 423 10.705 44.432 70.262 1.00 0.00 ATOM 255 O ILE 423 10.125 44.447 71.348 1.00 0.00 ATOM 256 CB ILE 423 9.781 45.769 68.369 1.00 0.00 ATOM 257 CEN ILE 423 9.163 46.429 67.759 1.00 0.00 ATOM 258 H ILE 423 12.321 45.656 67.875 1.00 0.00 ATOM 259 N GLY 424 11.217 43.327 69.730 1.00 0.00 ATOM 260 CA GLY 424 11.077 42.029 70.378 1.00 0.00 ATOM 261 C GLY 424 11.924 41.950 71.642 1.00 0.00 ATOM 262 O GLY 424 11.486 41.417 72.661 1.00 0.00 ATOM 263 CEN GLY 424 11.077 42.029 70.378 1.00 0.00 ATOM 264 H GLY 424 11.714 43.389 68.853 1.00 0.00 ATOM 265 N ASP 425 13.138 42.486 71.568 1.00 0.00 ATOM 266 CA ASP 425 14.023 42.538 72.726 1.00 0.00 ATOM 267 C ASP 425 13.440 43.419 73.824 1.00 0.00 ATOM 268 O ASP 425 13.535 43.095 75.008 1.00 0.00 ATOM 269 CB ASP 425 15.407 43.049 72.321 1.00 0.00 ATOM 270 CEN ASP 425 16.332 42.700 72.078 1.00 0.00 ATOM 271 H ASP 425 13.456 42.865 70.688 1.00 0.00 ATOM 272 N PHE 426 12.838 44.533 73.424 1.00 0.00 ATOM 273 CA PHE 426 12.165 45.422 74.366 1.00 0.00 ATOM 274 C PHE 426 11.030 44.703 75.084 1.00 0.00 ATOM 275 O PHE 426 10.886 44.813 76.302 1.00 0.00 ATOM 276 CB PHE 426 11.632 46.660 73.644 1.00 0.00 ATOM 277 CEN PHE 426 12.063 48.170 73.397 1.00 0.00 ATOM 278 H PHE 426 12.846 44.773 72.443 1.00 0.00 ATOM 279 N LEU 427 10.227 43.968 74.324 1.00 0.00 ATOM 280 CA LEU 427 9.073 43.270 74.879 1.00 0.00 ATOM 281 C LEU 427 9.504 42.185 75.858 1.00 0.00 ATOM 282 O LEU 427 8.904 42.018 76.919 1.00 0.00 ATOM 283 CB LEU 427 8.226 42.666 73.752 1.00 0.00 ATOM 284 CEN LEU 427 6.885 43.080 73.116 1.00 0.00 ATOM 285 H LEU 427 10.419 43.891 73.336 1.00 0.00 ATOM 286 N LYS 428 10.549 41.450 75.494 1.00 0.00 ATOM 287 CA LYS 428 11.064 40.379 76.339 1.00 0.00 ATOM 288 C LYS 428 12.016 40.922 77.398 1.00 0.00 ATOM 289 O LYS 428 12.440 40.194 78.296 1.00 0.00 ATOM 290 CB LYS 428 11.769 39.319 75.492 1.00 0.00 ATOM 291 CEN LYS 428 11.741 37.401 74.600 1.00 0.00 ATOM 292 H LYS 428 10.999 41.637 74.609 1.00 0.00 ATOM 293 N GLY 429 12.345 42.204 77.288 1.00 0.00 ATOM 294 CA GLY 429 13.248 42.847 78.236 1.00 0.00 ATOM 295 C GLY 429 12.571 43.057 79.583 1.00 0.00 ATOM 296 O GLY 429 11.349 43.181 79.664 1.00 0.00 ATOM 297 CEN GLY 429 13.248 42.847 78.236 1.00 0.00 ATOM 298 H GLY 429 11.962 42.747 76.527 1.00 0.00 ATOM 299 N ARG 430 13.373 43.098 80.642 1.00 0.00 ATOM 300 CA ARG 430 12.856 43.319 81.987 1.00 0.00 ATOM 301 C ARG 430 12.976 44.783 82.390 1.00 0.00 ATOM 302 O ARG 430 12.446 45.198 83.421 1.00 0.00 ATOM 303 CB ARG 430 13.511 42.404 83.012 1.00 0.00 ATOM 304 CEN ARG 430 13.893 40.471 84.519 1.00 0.00 ATOM 305 H ARG 430 14.367 42.972 80.512 1.00 0.00 ATOM 306 N ASP 431 13.674 45.561 81.571 1.00 0.00 ATOM 307 CA ASP 431 13.947 46.958 81.888 1.00 0.00 ATOM 308 C ASP 431 12.789 47.855 81.470 1.00 0.00 ATOM 309 O ASP 431 12.996 48.922 80.892 1.00 0.00 ATOM 310 CB ASP 431 15.240 47.419 81.212 1.00 0.00 ATOM 311 CEN ASP 431 16.230 47.550 81.418 1.00 0.00 ATOM 312 H ASP 431 14.025 45.176 80.706 1.00 0.00 ATOM 313 N PRO 432 11.571 47.415 81.763 1.00 0.00 ATOM 314 CA PRO 432 10.382 48.214 81.492 1.00 0.00 ATOM 315 C PRO 432 10.445 49.556 82.210 1.00 0.00 ATOM 316 O PRO 432 10.810 49.626 83.383 1.00 0.00 ATOM 317 CB PRO 432 9.219 47.342 81.997 1.00 0.00 ATOM 318 CEN PRO 432 10.522 46.223 82.484 1.00 0.00 ATOM 319 N SER 433 10.086 50.619 81.499 1.00 0.00 ATOM 320 CA SER 433 10.085 51.960 82.072 1.00 0.00 ATOM 321 C SER 433 8.766 52.673 81.803 1.00 0.00 ATOM 322 O SER 433 8.362 52.839 80.652 1.00 0.00 ATOM 323 CB SER 433 11.244 52.765 81.516 1.00 0.00 ATOM 324 CEN SER 433 11.612 52.945 81.159 1.00 0.00 ATOM 325 H SER 433 9.806 50.495 80.536 1.00 0.00 ATOM 326 N GLN 434 8.098 53.094 82.872 1.00 0.00 ATOM 327 CA GLN 434 6.813 53.772 82.755 1.00 0.00 ATOM 328 C GLN 434 5.731 52.821 82.262 1.00 0.00 ATOM 329 O GLN 434 4.577 53.214 82.090 1.00 0.00 ATOM 330 CB GLN 434 6.924 54.967 81.803 1.00 0.00 ATOM 331 CEN GLN 434 7.089 56.702 81.716 1.00 0.00 ATOM 332 H GLN 434 8.491 52.939 83.790 1.00 0.00 ATOM 333 N LEU 435 6.109 51.567 82.036 1.00 0.00 ATOM 334 CA LEU 435 5.157 50.541 81.629 1.00 0.00 ATOM 335 C LEU 435 4.426 49.959 82.832 1.00 0.00 ATOM 336 O LEU 435 5.050 49.427 83.751 1.00 0.00 ATOM 337 CB LEU 435 5.876 49.430 80.853 1.00 0.00 ATOM 338 CEN LEU 435 5.945 49.078 79.355 1.00 0.00 ATOM 339 H LEU 435 7.082 51.319 82.149 1.00 0.00 ATOM 340 N GLY 436 3.102 50.066 82.821 1.00 0.00 ATOM 341 CA GLY 436 2.283 49.536 83.905 1.00 0.00 ATOM 342 C GLY 436 1.114 48.723 83.365 1.00 0.00 ATOM 343 O GLY 436 0.802 48.780 82.176 1.00 0.00 ATOM 344 CEN GLY 436 2.282 49.536 83.906 1.00 0.00 ATOM 345 H GLY 436 2.651 50.524 82.042 1.00 0.00 ATOM 346 N ASP 437 0.468 47.967 84.247 1.00 0.00 ATOM 347 CA ASP 437 -0.645 47.111 83.853 1.00 0.00 ATOM 348 C ASP 437 -1.840 47.938 83.395 1.00 0.00 ATOM 349 O ASP 437 -2.646 47.483 82.584 1.00 0.00 ATOM 350 CB ASP 437 -1.053 46.195 85.009 1.00 0.00 ATOM 351 CEN ASP 437 -0.907 45.244 85.345 1.00 0.00 ATOM 352 H ASP 437 0.756 47.985 85.215 1.00 0.00 ATOM 353 N VAL 438 -1.948 49.153 83.920 1.00 0.00 ATOM 354 CA VAL 438 -3.059 50.036 83.586 1.00 0.00 ATOM 355 C VAL 438 -3.010 50.453 82.122 1.00 0.00 ATOM 356 O VAL 438 -4.044 50.704 81.502 1.00 0.00 ATOM 357 CB VAL 438 -3.064 51.298 84.468 1.00 0.00 ATOM 358 CEN VAL 438 -3.397 51.615 84.982 1.00 0.00 ATOM 359 H VAL 438 -1.242 49.475 84.567 1.00 0.00 ATOM 360 N GLU 439 -1.802 50.525 81.571 1.00 0.00 ATOM 361 CA GLU 439 -1.618 50.891 80.172 1.00 0.00 ATOM 362 C GLU 439 -1.038 49.732 79.372 1.00 0.00 ATOM 363 O GLU 439 0.173 49.512 79.368 1.00 0.00 ATOM 364 CB GLU 439 -0.710 52.117 80.054 1.00 0.00 ATOM 365 CEN GLU 439 -0.517 53.798 79.851 1.00 0.00 ATOM 366 H GLU 439 -0.992 50.321 82.138 1.00 0.00 ATOM 367 N PRO 440 -1.911 48.992 78.695 1.00 0.00 ATOM 368 CA PRO 440 -1.494 47.821 77.934 1.00 0.00 ATOM 369 C PRO 440 -0.456 48.188 76.881 1.00 0.00 ATOM 370 O PRO 440 -0.701 49.039 76.025 1.00 0.00 ATOM 371 CB PRO 440 -2.797 47.297 77.306 1.00 0.00 ATOM 372 CEN PRO 440 -3.525 48.721 78.099 1.00 0.00 ATOM 373 N SER 441 0.702 47.542 76.948 1.00 0.00 ATOM 374 CA SER 441 1.753 47.746 75.957 1.00 0.00 ATOM 375 C SER 441 1.325 47.232 74.588 1.00 0.00 ATOM 376 O SER 441 1.671 47.816 73.560 1.00 0.00 ATOM 377 CB SER 441 3.030 47.063 76.403 1.00 0.00 ATOM 378 CEN SER 441 3.354 46.691 76.632 1.00 0.00 ATOM 379 H SER 441 0.860 46.891 77.706 1.00 0.00 ATOM 380 N PHE 442 0.573 46.137 74.581 1.00 0.00 ATOM 381 CA PHE 442 0.042 45.581 73.342 1.00 0.00 ATOM 382 C PHE 442 -1.476 45.699 73.292 1.00 0.00 ATOM 383 O PHE 442 -2.180 45.126 74.123 1.00 0.00 ATOM 384 CB PHE 442 0.462 44.118 73.191 1.00 0.00 ATOM 385 CEN PHE 442 1.574 43.272 72.433 1.00 0.00 ATOM 386 H PHE 442 0.364 45.678 75.456 1.00 0.00 ATOM 387 N THR 443 -1.974 46.446 72.313 1.00 0.00 ATOM 388 CA THR 443 -3.411 46.628 72.143 1.00 0.00 ATOM 389 C THR 443 -3.727 47.307 70.817 1.00 0.00 ATOM 390 O THR 443 -2.838 47.842 70.155 1.00 0.00 ATOM 391 CB THR 443 -4.015 47.460 73.290 1.00 0.00 ATOM 392 CEN THR 443 -4.129 47.547 73.856 1.00 0.00 ATOM 393 H THR 443 -1.342 46.899 71.670 1.00 0.00 ATOM 394 N PRO 444 -4.999 47.281 70.433 1.00 0.00 ATOM 395 CA PRO 444 -5.441 47.922 69.200 1.00 0.00 ATOM 396 C PRO 444 -5.145 49.416 69.220 1.00 0.00 ATOM 397 O PRO 444 -5.235 50.063 70.264 1.00 0.00 ATOM 398 CB PRO 444 -6.950 47.632 69.147 1.00 0.00 ATOM 399 CEN PRO 444 -6.661 46.840 70.719 1.00 0.00 ATOM 400 N GLY 445 -4.790 49.959 68.060 1.00 0.00 ATOM 401 CA GLY 445 -4.515 51.386 67.934 1.00 0.00 ATOM 402 C GLY 445 -3.067 51.700 68.288 1.00 0.00 ATOM 403 O GLY 445 -2.692 52.864 68.430 1.00 0.00 ATOM 404 CEN GLY 445 -4.515 51.386 67.934 1.00 0.00 ATOM 405 H GLY 445 -4.710 49.369 67.245 1.00 0.00 ATOM 406 N ILE 446 -2.257 50.656 68.429 1.00 0.00 ATOM 407 CA ILE 446 -0.846 50.820 68.755 1.00 0.00 ATOM 408 C ILE 446 -0.065 51.361 67.565 1.00 0.00 ATOM 409 O ILE 446 -0.083 50.778 66.481 1.00 0.00 ATOM 410 CB ILE 446 -0.215 49.492 69.212 1.00 0.00 ATOM 411 CEN ILE 446 -0.041 48.833 70.063 1.00 0.00 ATOM 412 H ILE 446 -2.629 49.725 68.307 1.00 0.00 ATOM 413 N LYS 447 0.623 52.479 67.773 1.00 0.00 ATOM 414 CA LYS 447 1.395 53.113 66.712 1.00 0.00 ATOM 415 C LYS 447 2.583 53.881 67.278 1.00 0.00 ATOM 416 O LYS 447 2.696 54.062 68.491 1.00 0.00 ATOM 417 CB LYS 447 0.509 54.048 65.888 1.00 0.00 ATOM 418 CEN LYS 447 -0.574 54.411 64.108 1.00 0.00 ATOM 419 H LYS 447 0.609 52.900 68.691 1.00 0.00 ATOM 420 N LEU 448 3.466 54.332 66.394 1.00 0.00 ATOM 421 CA LEU 448 4.671 55.040 66.808 1.00 0.00 ATOM 422 C LEU 448 4.329 56.298 67.595 1.00 0.00 ATOM 423 O LEU 448 5.037 56.669 68.531 1.00 0.00 ATOM 424 CB LEU 448 5.526 55.392 65.583 1.00 0.00 ATOM 425 CEN LEU 448 6.823 54.794 65.007 1.00 0.00 ATOM 426 H LEU 448 3.297 54.182 65.410 1.00 0.00 ATOM 427 N THR 449 3.238 56.953 67.208 1.00 0.00 ATOM 428 CA THR 449 2.849 58.219 67.818 1.00 0.00 ATOM 429 C THR 449 2.561 58.048 69.304 1.00 0.00 ATOM 430 O THR 449 2.834 58.943 70.106 1.00 0.00 ATOM 431 CB THR 449 1.609 58.819 67.131 1.00 0.00 ATOM 432 CEN THR 449 1.333 59.027 66.660 1.00 0.00 ATOM 433 H THR 449 2.665 56.564 66.474 1.00 0.00 ATOM 434 N ASP 450 2.008 56.896 69.667 1.00 0.00 ATOM 435 CA ASP 450 1.583 56.648 71.039 1.00 0.00 ATOM 436 C ASP 450 2.381 55.512 71.666 1.00 0.00 ATOM 437 O ASP 450 2.127 55.116 72.803 1.00 0.00 ATOM 438 CB ASP 450 0.087 56.328 71.088 1.00 0.00 ATOM 439 CEN ASP 450 -0.806 56.782 71.271 1.00 0.00 ATOM 440 H ASP 450 1.879 56.173 68.973 1.00 0.00 ATOM 441 N LEU 451 3.348 54.991 70.917 1.00 0.00 ATOM 442 CA LEU 451 4.156 53.871 71.382 1.00 0.00 ATOM 443 C LEU 451 5.166 54.316 72.431 1.00 0.00 ATOM 444 O LEU 451 5.832 53.491 73.057 1.00 0.00 ATOM 445 CB LEU 451 4.874 53.209 70.199 1.00 0.00 ATOM 446 CEN LEU 451 4.624 51.901 69.423 1.00 0.00 ATOM 447 H LEU 451 3.527 55.382 70.004 1.00 0.00 ATOM 448 N SER 452 5.275 55.628 72.621 1.00 0.00 ATOM 449 CA SER 452 6.188 56.185 73.611 1.00 0.00 ATOM 450 C SER 452 5.687 55.932 75.027 1.00 0.00 ATOM 451 O SER 452 6.423 56.112 75.998 1.00 0.00 ATOM 452 CB SER 452 6.372 57.671 73.372 1.00 0.00 ATOM 453 CEN SER 452 6.248 58.183 73.236 1.00 0.00 ATOM 454 H SER 452 4.711 56.253 72.064 1.00 0.00 ATOM 455 N LYS 453 4.431 55.514 75.139 1.00 0.00 ATOM 456 CA LYS 453 3.820 55.265 76.438 1.00 0.00 ATOM 457 C LYS 453 4.207 53.893 76.975 1.00 0.00 ATOM 458 O LYS 453 4.045 53.612 78.162 1.00 0.00 ATOM 459 CB LYS 453 2.297 55.383 76.346 1.00 0.00 ATOM 460 CEN LYS 453 0.543 56.503 76.724 1.00 0.00 ATOM 461 H LYS 453 3.886 55.367 74.302 1.00 0.00 ATOM 462 N ALA 454 4.719 53.041 76.093 1.00 0.00 ATOM 463 CA ALA 454 5.060 51.671 76.458 1.00 0.00 ATOM 464 C ALA 454 6.535 51.386 76.211 1.00 0.00 ATOM 465 O ALA 454 7.157 50.609 76.935 1.00 0.00 ATOM 466 CB ALA 454 4.190 50.686 75.692 1.00 0.00 ATOM 467 CEN ALA 454 4.191 50.686 75.692 1.00 0.00 ATOM 468 H ALA 454 4.875 53.351 75.144 1.00 0.00 ATOM 469 N LEU 455 7.091 52.019 75.183 1.00 0.00 ATOM 470 CA LEU 455 8.459 51.743 74.762 1.00 0.00 ATOM 471 C LEU 455 9.332 52.986 74.872 1.00 0.00 ATOM 472 O LEU 455 8.834 54.111 74.825 1.00 0.00 ATOM 473 CB LEU 455 8.473 51.207 73.325 1.00 0.00 ATOM 474 CEN LEU 455 8.667 49.796 72.736 1.00 0.00 ATOM 475 H LEU 455 6.551 52.709 74.681 1.00 0.00 ATOM 476 N PRO 456 10.635 52.776 75.020 1.00 0.00 ATOM 477 CA PRO 456 11.590 53.877 75.034 1.00 0.00 ATOM 478 C PRO 456 11.498 54.704 73.759 1.00 0.00 ATOM 479 O PRO 456 11.252 54.171 72.678 1.00 0.00 ATOM 480 CB PRO 456 12.957 53.186 75.177 1.00 0.00 ATOM 481 CEN PRO 456 11.992 51.687 75.113 1.00 0.00 ATOM 482 N PRO 457 11.696 56.011 73.892 1.00 0.00 ATOM 483 CA PRO 457 11.658 56.913 72.746 1.00 0.00 ATOM 484 C PRO 457 12.807 56.632 71.786 1.00 0.00 ATOM 485 O PRO 457 12.657 56.753 70.571 1.00 0.00 ATOM 486 CB PRO 457 11.754 58.317 73.369 1.00 0.00 ATOM 487 CEN PRO 457 11.887 57.417 74.905 1.00 0.00 ATOM 488 N PHE 458 13.956 56.258 72.340 1.00 0.00 ATOM 489 CA PHE 458 15.133 55.954 71.534 1.00 0.00 ATOM 490 C PHE 458 14.893 54.741 70.645 1.00 0.00 ATOM 491 O PHE 458 15.363 54.689 69.509 1.00 0.00 ATOM 492 CB PHE 458 16.348 55.718 72.431 1.00 0.00 ATOM 493 CEN PHE 458 17.612 56.525 72.957 1.00 0.00 ATOM 494 H PHE 458 14.015 56.181 73.346 1.00 0.00 ATOM 495 N ALA 459 14.158 53.766 71.170 1.00 0.00 ATOM 496 CA ALA 459 13.893 52.530 70.442 1.00 0.00 ATOM 497 C ALA 459 12.909 52.761 69.302 1.00 0.00 ATOM 498 O ALA 459 13.119 52.294 68.184 1.00 0.00 ATOM 499 CB ALA 459 13.370 51.459 71.388 1.00 0.00 ATOM 500 CEN ALA 459 13.370 51.460 71.388 1.00 0.00 ATOM 501 H ALA 459 13.773 53.883 72.095 1.00 0.00 ATOM 502 N VAL 460 11.835 53.487 69.593 1.00 0.00 ATOM 503 CA VAL 460 10.850 53.838 68.578 1.00 0.00 ATOM 504 C VAL 460 11.490 54.611 67.432 1.00 0.00 ATOM 505 O VAL 460 11.104 54.456 66.274 1.00 0.00 ATOM 506 CB VAL 460 9.701 54.677 69.170 1.00 0.00 ATOM 507 CEN VAL 460 9.033 54.661 69.341 1.00 0.00 ATOM 508 H VAL 460 11.697 53.802 70.542 1.00 0.00 ATOM 509 N GLU 461 12.472 55.442 67.762 1.00 0.00 ATOM 510 CA GLU 461 13.112 56.303 66.775 1.00 0.00 ATOM 511 C GLU 461 13.684 55.489 65.622 1.00 0.00 ATOM 512 O GLU 461 13.281 55.656 64.471 1.00 0.00 ATOM 513 CB GLU 461 14.215 57.140 67.428 1.00 0.00 ATOM 514 CEN GLU 461 14.747 58.609 68.106 1.00 0.00 ATOM 515 H GLU 461 12.784 55.479 68.722 1.00 0.00 ATOM 516 N ALA 462 14.628 54.609 65.938 1.00 0.00 ATOM 517 CA ALA 462 15.284 53.791 64.924 1.00 0.00 ATOM 518 C ALA 462 14.294 52.851 64.249 1.00 0.00 ATOM 519 O ALA 462 14.208 52.802 63.023 1.00 0.00 ATOM 520 CB ALA 462 16.433 53.005 65.539 1.00 0.00 ATOM 521 CEN ALA 462 16.431 53.005 65.539 1.00 0.00 ATOM 522 H ALA 462 14.898 54.503 66.906 1.00 0.00 ATOM 523 N ILE 463 13.549 52.105 65.058 1.00 0.00 ATOM 524 CA ILE 463 12.516 51.214 64.543 1.00 0.00 ATOM 525 C ILE 463 11.503 51.975 63.697 1.00 0.00 ATOM 526 O ILE 463 10.878 51.408 62.802 1.00 0.00 ATOM 527 CB ILE 463 11.779 50.487 65.681 1.00 0.00 ATOM 528 CEN ILE 463 11.794 49.621 66.344 1.00 0.00 ATOM 529 H ILE 463 13.701 52.158 66.055 1.00 0.00 ATOM 530 N ARG 464 11.345 53.262 63.988 1.00 0.00 ATOM 531 CA ARG 464 10.345 54.083 63.315 1.00 0.00 ATOM 532 C ARG 464 10.499 54.008 61.802 1.00 0.00 ATOM 533 O ARG 464 9.600 53.549 61.098 1.00 0.00 ATOM 534 CB ARG 464 10.359 55.522 63.807 1.00 0.00 ATOM 535 CEN ARG 464 9.773 57.565 65.085 1.00 0.00 ATOM 536 H ARG 464 11.933 53.682 64.694 1.00 0.00 ATOM 537 N GLU 465 11.645 54.463 61.306 1.00 0.00 ATOM 538 CA GLU 465 11.937 54.407 59.879 1.00 0.00 ATOM 539 C GLU 465 11.962 52.970 59.376 1.00 0.00 ATOM 540 O GLU 465 11.341 52.644 58.365 1.00 0.00 ATOM 541 CB GLU 465 13.273 55.093 59.579 1.00 0.00 ATOM 542 CEN GLU 465 14.146 56.457 59.048 1.00 0.00 ATOM 543 H GLU 465 12.332 54.856 61.934 1.00 0.00 ATOM 544 N ALA 466 12.685 52.112 60.088 1.00 0.00 ATOM 545 CA ALA 466 12.734 50.692 59.759 1.00 0.00 ATOM 546 C ALA 466 11.350 50.060 59.845 1.00 0.00 ATOM 547 O ALA 466 10.995 49.210 59.028 1.00 0.00 ATOM 548 CB ALA 466 13.707 49.968 60.678 1.00 0.00 ATOM 549 CEN ALA 466 13.706 49.968 60.677 1.00 0.00 ATOM 550 H ALA 466 13.216 52.452 60.877 1.00 0.00 ATOM 551 N ILE 467 10.573 50.481 60.837 1.00 0.00 ATOM 552 CA ILE 467 9.211 49.987 61.005 1.00 0.00 ATOM 553 C ILE 467 8.195 50.963 60.425 1.00 0.00 ATOM 554 O ILE 467 7.894 51.992 61.028 1.00 0.00 ATOM 555 CB ILE 467 8.881 49.737 62.488 1.00 0.00 ATOM 556 CEN ILE 467 8.938 49.020 63.307 1.00 0.00 ATOM 557 H ILE 467 10.933 51.161 61.490 1.00 0.00 ATOM 558 N PRO 468 7.669 50.632 59.250 1.00 0.00 ATOM 559 CA PRO 468 6.693 51.484 58.581 1.00 0.00 ATOM 560 C PRO 468 5.401 51.576 59.382 1.00 0.00 ATOM 561 O PRO 468 4.655 52.548 59.266 1.00 0.00 ATOM 562 CB PRO 468 6.480 50.809 57.215 1.00 0.00 ATOM 563 CEN PRO 468 7.617 49.591 57.854 1.00 0.00 ATOM 564 N ALA 469 5.142 50.558 60.196 1.00 0.00 ATOM 565 CA ALA 469 3.917 50.501 60.985 1.00 0.00 ATOM 566 C ALA 469 4.000 51.416 62.200 1.00 0.00 ATOM 567 O ALA 469 3.341 52.160 62.311 1.00 0.00 ATOM 568 CB ALA 469 3.631 49.069 61.414 1.00 0.00 ATOM 569 CEN ALA 469 3.630 49.070 61.415 1.00 0.00 ATOM 570 H ALA 469 5.811 49.805 60.271 1.00 0.00 TER END ########################## # # # ACE results: # # # ########################## WARNING!!! Different chains are predicted. Only first chain will be considered. ERROR! Check the residue numbering: PREDICTION <-> TARGET