####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 40 ( 319), selected 40 , name T0602TS207_1-D1 # Molecule2: number of CA atoms 55 ( 437), selected 40 , name T0602-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0602TS207_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 37 4 - 40 4.81 6.19 LCS_AVERAGE: 66.18 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 29 12 - 40 1.95 9.52 LCS_AVERAGE: 47.23 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 20 - 39 0.96 12.47 LCS_AVERAGE: 30.59 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 40 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 14 18 29 10 10 13 14 17 18 18 19 21 21 23 24 25 25 28 30 37 37 39 39 LCS_GDT N 2 N 2 14 18 29 10 10 13 14 17 18 18 19 21 21 23 24 25 25 27 30 30 34 39 39 LCS_GDT A 3 A 3 14 18 29 10 10 13 14 17 18 18 19 21 21 22 24 25 25 26 30 30 33 39 39 LCS_GDT M 4 M 4 14 18 37 10 10 13 14 17 18 18 19 21 22 23 24 27 29 36 36 37 37 39 39 LCS_GDT E 5 E 5 14 18 37 10 10 13 14 17 18 18 19 21 22 24 30 34 34 36 36 37 37 39 39 LCS_GDT R 6 R 6 14 18 37 10 10 13 14 17 18 18 19 21 22 23 25 27 33 36 36 37 37 39 39 LCS_GDT H 7 H 7 14 18 37 10 10 13 14 17 18 18 19 21 22 24 30 34 34 36 36 37 37 39 39 LCS_GDT Q 8 Q 8 14 18 37 10 10 13 14 17 18 18 22 28 32 33 33 34 34 36 36 37 37 39 39 LCS_GDT H 9 H 9 14 18 37 10 10 13 14 17 18 19 26 30 32 33 33 34 34 36 36 37 37 39 39 LCS_GDT L 10 L 10 14 18 37 10 10 13 14 17 18 19 23 29 32 33 33 34 34 36 36 37 37 39 39 LCS_GDT L 11 L 11 14 18 37 5 8 13 14 17 18 25 28 30 32 33 33 34 34 36 36 37 37 39 39 LCS_GDT S 12 S 12 14 29 37 5 9 13 16 25 28 29 29 30 32 33 33 34 34 36 36 37 37 39 39 LCS_GDT E 13 E 13 14 29 37 4 8 12 14 20 27 29 29 30 32 33 33 34 34 36 36 37 37 39 39 LCS_GDT Y 14 Y 14 14 29 37 5 10 13 16 25 28 29 29 30 32 33 33 34 34 36 36 37 37 39 39 LCS_GDT Q 15 Q 15 13 29 37 4 10 14 20 26 28 29 29 30 32 33 33 34 34 36 36 37 37 39 39 LCS_GDT Q 16 Q 16 13 29 37 9 10 18 24 26 28 29 29 30 32 33 33 34 34 36 36 37 37 39 39 LCS_GDT I 17 I 17 13 29 37 9 11 18 24 26 28 29 29 30 32 33 33 34 34 36 36 37 37 39 39 LCS_GDT L 18 L 18 13 29 37 9 11 18 24 26 28 29 29 30 32 33 33 34 34 36 36 37 37 39 39 LCS_GDT T 19 T 19 19 29 37 9 13 19 24 26 28 29 29 30 32 33 33 34 34 36 36 37 37 39 39 LCS_GDT L 20 L 20 20 29 37 9 13 19 24 26 28 29 29 30 32 33 33 34 34 36 36 37 37 39 39 LCS_GDT S 21 S 21 20 29 37 9 13 19 24 26 28 29 29 30 32 33 33 34 34 36 36 37 37 39 39 LCS_GDT E 22 E 22 20 29 37 9 13 19 24 26 28 29 29 30 32 33 33 34 34 36 36 37 37 39 39 LCS_GDT Q 23 Q 23 20 29 37 9 14 19 24 26 28 29 29 30 32 33 33 34 34 36 36 37 37 39 39 LCS_GDT M 24 M 24 20 29 37 9 11 19 24 26 28 29 29 30 32 33 33 34 34 36 36 37 37 39 39 LCS_GDT L 25 L 25 20 29 37 8 14 19 24 26 28 29 29 30 32 33 33 34 34 36 36 37 37 39 39 LCS_GDT V 26 V 26 20 29 37 8 14 19 24 26 28 29 29 30 32 33 33 34 34 36 36 37 37 39 39 LCS_GDT L 27 L 27 20 29 37 8 14 19 24 26 28 29 29 30 32 33 33 34 34 36 36 37 37 39 39 LCS_GDT A 28 A 28 20 29 37 8 14 19 24 26 28 29 29 30 32 33 33 34 34 36 36 37 37 39 39 LCS_GDT T 29 T 29 20 29 37 8 14 19 24 26 28 29 29 30 32 33 33 34 34 36 36 37 37 39 39 LCS_GDT E 30 E 30 20 29 37 3 13 19 24 26 28 29 29 30 32 33 33 34 34 36 36 37 37 39 39 LCS_GDT G 31 G 31 20 29 37 8 14 19 24 26 28 29 29 30 32 33 33 34 34 36 36 37 37 39 39 LCS_GDT N 32 N 32 20 29 37 7 14 19 24 26 28 29 29 30 32 33 33 34 34 36 36 37 37 39 39 LCS_GDT W 33 W 33 20 29 37 6 14 19 24 26 28 29 29 30 32 33 33 34 34 36 36 37 37 39 39 LCS_GDT D 34 D 34 20 29 37 6 14 19 24 26 28 29 29 30 31 33 33 33 34 35 36 37 37 38 38 LCS_GDT A 35 A 35 20 29 37 6 14 19 24 26 28 29 29 30 32 33 33 34 34 36 36 37 37 39 39 LCS_GDT L 36 L 36 20 29 37 4 14 19 24 26 28 29 29 30 32 33 33 34 34 36 36 37 37 39 39 LCS_GDT V 37 V 37 20 29 37 3 14 19 24 26 28 29 29 30 32 33 33 34 34 36 36 37 37 39 39 LCS_GDT D 38 D 38 20 29 37 3 10 18 24 26 28 29 29 30 32 33 33 34 34 36 36 37 37 39 39 LCS_GDT L 39 L 39 20 29 37 5 14 19 24 26 28 29 29 30 32 33 33 34 34 36 36 37 37 39 39 LCS_GDT E 40 E 40 6 29 37 3 3 15 20 26 28 29 29 30 32 33 33 34 34 36 36 37 37 39 39 LCS_AVERAGE LCS_A: 48.00 ( 30.59 47.23 66.18 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 14 19 24 26 28 29 29 30 32 33 33 34 34 36 36 37 37 39 39 GDT PERCENT_AT 18.18 25.45 34.55 43.64 47.27 50.91 52.73 52.73 54.55 58.18 60.00 60.00 61.82 61.82 65.45 65.45 67.27 67.27 70.91 70.91 GDT RMS_LOCAL 0.27 0.66 0.88 1.24 1.44 1.81 1.95 1.95 2.33 3.18 3.22 3.22 4.06 3.74 4.75 4.44 4.81 4.81 5.78 5.78 GDT RMS_ALL_AT 21.37 13.17 12.64 11.16 10.73 9.80 9.52 9.52 8.95 7.52 7.62 7.62 6.65 7.08 6.14 6.47 6.19 6.19 5.86 5.86 # Checking swapping # possible swapping detected: E 30 E 30 # possible swapping detected: D 38 D 38 # possible swapping detected: E 40 E 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA S 1 S 1 25.303 0 0.338 0.808 26.991 0.000 0.000 LGA N 2 N 2 24.670 0 0.026 0.760 26.452 0.000 0.000 LGA A 3 A 3 24.735 0 0.051 0.072 26.635 0.000 0.000 LGA M 4 M 4 21.010 0 0.091 0.915 25.435 0.000 0.000 LGA E 5 E 5 16.708 0 0.076 0.878 20.571 0.000 0.000 LGA R 6 R 6 17.285 2 0.042 1.110 26.811 0.000 0.000 LGA H 7 H 7 16.294 0 0.040 1.525 19.286 0.000 0.000 LGA Q 8 Q 8 11.660 0 0.052 0.703 13.624 1.310 0.582 LGA H 9 H 9 8.861 0 0.123 0.391 11.586 3.929 1.905 LGA L 10 L 10 9.702 0 0.050 0.245 12.580 3.929 1.964 LGA L 11 L 11 7.854 0 0.031 1.141 13.049 14.405 7.560 LGA S 12 S 12 3.544 0 0.108 0.345 5.367 48.095 47.619 LGA E 13 E 13 4.029 0 0.116 0.232 7.293 47.262 31.217 LGA Y 14 Y 14 3.110 1 0.064 0.281 6.820 57.381 32.976 LGA Q 15 Q 15 1.677 0 0.036 0.561 5.129 79.643 64.709 LGA Q 16 Q 16 0.984 0 0.071 0.417 4.397 88.214 69.735 LGA I 17 I 17 0.466 0 0.051 0.130 0.898 95.238 96.429 LGA L 18 L 18 0.828 0 0.053 1.443 5.447 90.595 70.417 LGA T 19 T 19 0.870 0 0.075 0.166 1.439 85.952 87.959 LGA L 20 L 20 1.424 0 0.071 1.057 5.428 77.143 65.298 LGA S 21 S 21 1.579 0 0.083 0.805 1.874 77.143 75.714 LGA E 22 E 22 1.605 0 0.032 1.107 5.150 72.857 62.804 LGA Q 23 Q 23 1.790 0 0.091 1.291 5.200 72.857 61.640 LGA M 24 M 24 2.373 0 0.016 1.106 8.379 66.786 47.440 LGA L 25 L 25 2.263 0 0.045 1.397 3.846 68.810 66.250 LGA V 26 V 26 1.098 0 0.063 0.164 1.639 85.952 86.735 LGA L 27 L 27 0.130 0 0.045 0.205 1.485 100.000 93.036 LGA A 28 A 28 0.771 0 0.036 0.035 1.457 85.952 85.048 LGA T 29 T 29 2.270 0 0.058 1.150 4.820 63.095 59.116 LGA E 30 E 30 2.491 0 0.215 0.618 7.423 66.786 43.016 LGA G 31 G 31 1.594 0 0.187 0.187 2.506 68.929 68.929 LGA N 32 N 32 1.376 0 0.136 1.232 5.561 81.429 65.238 LGA W 33 W 33 1.248 1 0.188 1.476 7.833 75.119 38.605 LGA D 34 D 34 2.393 0 0.105 1.160 6.688 68.810 49.167 LGA A 35 A 35 1.284 0 0.207 0.202 1.448 81.429 83.238 LGA L 36 L 36 1.740 0 0.062 0.876 3.228 72.857 70.000 LGA V 37 V 37 2.059 0 0.023 1.026 3.816 66.786 61.769 LGA D 38 D 38 1.863 0 0.168 0.924 3.872 70.833 63.214 LGA L 39 L 39 1.613 0 0.101 0.166 3.725 75.000 64.583 LGA E 40 E 40 2.233 0 0.054 1.120 6.156 61.190 50.899 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 40 160 160 100.00 323 319 98.76 55 SUMMARY(RMSD_GDC): 5.857 5.677 6.503 39.558 34.087 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 40 55 4.0 29 1.95 46.818 49.024 1.417 LGA_LOCAL RMSD: 1.946 Number of atoms: 29 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 9.521 Number of assigned atoms: 40 Std_ASGN_ATOMS RMSD: 5.857 Standard rmsd on all 40 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.382403 * X + 0.008967 * Y + -0.923952 * Z + 79.014641 Y_new = -0.787269 * X + 0.520311 * Y + 0.330883 * Z + -22.578724 Z_new = 0.483710 * X + 0.853930 * Y + -0.191909 * Z + 4.382792 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.022966 -0.504888 1.791860 [DEG: -115.9074 -28.9280 102.6660 ] ZXZ: -1.914684 1.763903 0.515386 [DEG: -109.7033 101.0642 29.5295 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0602TS207_1-D1 REMARK 2: T0602-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0602TS207_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 40 55 4.0 29 1.95 49.024 5.86 REMARK ---------------------------------------------------------- MOLECULE T0602TS207_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0602 REMARK MODEL 1 REMARK PARENT 2NOV_A 3BC1_B 3DM5_A 2RFR_A ATOM 1 N SER 1 22.703 -17.032 44.398 1.00 0.00 N ATOM 2 CA SER 1 22.167 -16.609 45.704 1.00 0.00 C ATOM 3 CB SER 1 22.530 -15.135 45.979 1.00 0.00 C ATOM 4 OG SER 1 23.932 -15.010 46.168 1.00 0.00 O ATOM 5 C SER 1 20.697 -16.836 45.745 1.00 0.00 C ATOM 6 O SER 1 20.134 -17.364 44.793 1.00 0.00 O ATOM 7 N ASN 2 20.048 -16.447 46.855 1.00 0.00 N ATOM 8 CA ASN 2 18.647 -16.683 47.064 1.00 0.00 C ATOM 9 CB ASN 2 18.176 -16.164 48.426 1.00 0.00 C ATOM 10 CG ASN 2 16.824 -16.770 48.765 1.00 0.00 C ATOM 11 OD1 ASN 2 16.740 -17.952 49.097 1.00 0.00 O ATOM 12 ND2 ASN 2 15.742 -15.944 48.732 1.00 0.00 N ATOM 13 C ASN 2 17.835 -15.988 46.024 1.00 0.00 C ATOM 14 O ASN 2 16.924 -16.573 45.452 1.00 0.00 O ATOM 15 N ALA 3 18.144 -14.714 45.742 1.00 0.00 N ATOM 16 CA ALA 3 17.383 -13.936 44.800 1.00 0.00 C ATOM 17 CB ALA 3 17.879 -12.492 44.718 1.00 0.00 C ATOM 18 C ALA 3 17.488 -14.502 43.428 1.00 0.00 C ATOM 19 O ALA 3 16.494 -14.596 42.720 1.00 0.00 O ATOM 20 N MET 4 18.701 -14.887 43.000 1.00 0.00 N ATOM 21 CA MET 4 18.837 -15.403 41.670 1.00 0.00 C ATOM 22 CB MET 4 20.283 -15.558 41.212 1.00 0.00 C ATOM 23 CG MET 4 20.920 -14.218 40.836 1.00 0.00 C ATOM 24 SD MET 4 22.633 -14.343 40.246 1.00 0.00 S ATOM 25 CE MET 4 22.775 -12.594 39.771 1.00 0.00 C ATOM 26 C MET 4 18.144 -16.712 41.512 1.00 0.00 C ATOM 27 O MET 4 17.585 -16.970 40.453 1.00 0.00 O ATOM 28 N GLU 5 18.137 -17.570 42.541 1.00 0.00 N ATOM 29 CA GLU 5 17.484 -18.843 42.438 1.00 0.00 C ATOM 30 CB GLU 5 17.731 -19.744 43.649 1.00 0.00 C ATOM 31 CG GLU 5 17.030 -21.106 43.581 1.00 0.00 C ATOM 32 CD GLU 5 17.147 -21.814 44.934 1.00 0.00 C ATOM 33 OE1 GLU 5 17.457 -21.132 45.949 1.00 0.00 O ATOM 34 OE2 GLU 5 16.929 -23.056 44.967 1.00 0.00 O ATOM 35 C GLU 5 16.010 -18.661 42.327 1.00 0.00 C ATOM 36 O GLU 5 15.371 -19.370 41.556 1.00 0.00 O ATOM 37 N ARG 6 15.415 -17.710 43.084 1.00 0.00 N ATOM 38 CA ARG 6 13.991 -17.595 43.023 1.00 0.00 C ATOM 39 CB ARG 6 13.452 -16.605 44.074 1.00 0.00 C ATOM 40 CG ARG 6 13.701 -17.034 45.525 1.00 0.00 C ATOM 41 CD ARG 6 12.648 -18.000 46.069 1.00 0.00 C ATOM 42 NE ARG 6 12.926 -18.228 47.517 1.00 0.00 N ATOM 43 CZ ARG 6 13.894 -19.112 47.903 1.00 0.00 C ATOM 46 C ARG 6 13.619 -17.063 41.667 1.00 0.00 C ATOM 47 O ARG 6 12.643 -17.514 41.071 1.00 0.00 O ATOM 48 N HIS 7 14.385 -16.089 41.136 1.00 0.00 N ATOM 49 CA HIS 7 14.050 -15.498 39.868 1.00 0.00 C ATOM 50 ND1 HIS 7 13.496 -12.890 37.936 1.00 0.00 N ATOM 51 CG HIS 7 14.520 -13.789 38.122 1.00 0.00 C ATOM 52 CB HIS 7 14.948 -14.329 39.454 1.00 0.00 C ATOM 53 NE2 HIS 7 14.273 -13.393 35.915 1.00 0.00 N ATOM 54 CD2 HIS 7 14.985 -14.085 36.876 1.00 0.00 C ATOM 55 CE1 HIS 7 13.392 -12.685 36.600 1.00 0.00 C ATOM 56 C HIS 7 14.129 -16.494 38.754 1.00 0.00 C ATOM 57 O HIS 7 13.263 -16.525 37.881 1.00 0.00 O ATOM 58 N GLN 8 15.175 -17.338 38.751 1.00 0.00 N ATOM 59 CA GLN 8 15.340 -18.297 37.696 1.00 0.00 C ATOM 60 CB GLN 8 16.524 -19.238 37.999 1.00 0.00 C ATOM 61 CG GLN 8 16.887 -20.208 36.878 1.00 0.00 C ATOM 62 CD GLN 8 18.084 -19.612 36.149 1.00 0.00 C ATOM 63 OE1 GLN 8 19.225 -20.021 36.361 1.00 0.00 O ATOM 64 NE2 GLN 8 17.823 -18.602 35.278 1.00 0.00 N ATOM 65 C GLN 8 14.109 -19.132 37.733 1.00 0.00 C ATOM 66 O GLN 8 13.496 -19.457 36.714 1.00 0.00 O ATOM 67 N HIS 9 13.706 -19.449 38.969 1.00 0.00 N ATOM 68 CA HIS 9 12.590 -20.283 39.262 1.00 0.00 C ATOM 69 ND1 HIS 9 12.202 -23.107 40.537 1.00 0.00 N ATOM 70 CG HIS 9 11.746 -21.890 40.991 1.00 0.00 C ATOM 71 CB HIS 9 12.490 -20.616 40.756 1.00 0.00 C ATOM 72 NE2 HIS 9 10.296 -23.504 41.610 1.00 0.00 N ATOM 73 CD2 HIS 9 10.580 -22.148 41.639 1.00 0.00 C ATOM 74 CE1 HIS 9 11.304 -24.038 40.937 1.00 0.00 C ATOM 75 C HIS 9 11.353 -19.569 38.826 1.00 0.00 C ATOM 76 O HIS 9 10.340 -20.198 38.535 1.00 0.00 O ATOM 77 N LEU 10 11.399 -18.224 38.782 1.00 0.00 N ATOM 78 CA LEU 10 10.263 -17.436 38.391 1.00 0.00 C ATOM 79 CB LEU 10 10.544 -15.926 38.347 1.00 0.00 C ATOM 80 CG LEU 10 9.443 -15.137 37.594 1.00 0.00 C ATOM 81 CD1 LEU 10 8.070 -15.266 38.269 1.00 0.00 C ATOM 82 CD2 LEU 10 9.868 -13.683 37.341 1.00 0.00 C ATOM 83 C LEU 10 9.825 -17.798 37.011 1.00 0.00 C ATOM 84 O LEU 10 8.633 -17.819 36.713 1.00 0.00 O ATOM 85 N LEU 11 10.764 -18.056 36.097 1.00 0.00 N ATOM 86 CA LEU 11 10.294 -18.370 34.786 1.00 0.00 C ATOM 87 CB LEU 11 11.436 -18.453 33.761 1.00 0.00 C ATOM 88 CG LEU 11 12.068 -17.064 33.502 1.00 0.00 C ATOM 89 CD1 LEU 11 12.697 -16.478 34.778 1.00 0.00 C ATOM 90 CD2 LEU 11 13.057 -17.093 32.330 1.00 0.00 C ATOM 91 C LEU 11 9.523 -19.652 34.868 1.00 0.00 C ATOM 92 O LEU 11 8.442 -19.775 34.288 1.00 0.00 O ATOM 93 N SER 12 10.035 -20.634 35.637 1.00 0.00 N ATOM 94 CA SER 12 9.291 -21.857 35.738 1.00 0.00 C ATOM 95 CB SER 12 9.994 -22.973 36.538 1.00 0.00 C ATOM 96 OG SER 12 9.987 -22.676 37.926 1.00 0.00 O ATOM 97 C SER 12 8.021 -21.528 36.450 1.00 0.00 C ATOM 98 O SER 12 7.024 -22.237 36.323 1.00 0.00 O ATOM 99 N GLU 13 8.033 -20.411 37.200 1.00 0.00 N ATOM 100 CA GLU 13 6.882 -19.974 37.933 1.00 0.00 C ATOM 101 CB GLU 13 7.081 -18.701 38.775 1.00 0.00 C ATOM 102 CG GLU 13 8.025 -18.878 39.966 1.00 0.00 C ATOM 103 CD GLU 13 7.253 -19.537 41.104 1.00 0.00 C ATOM 104 OE1 GLU 13 6.028 -19.778 40.941 1.00 0.00 O ATOM 105 OE2 GLU 13 7.889 -19.803 42.156 1.00 0.00 O ATOM 106 C GLU 13 5.799 -19.681 36.951 1.00 0.00 C ATOM 107 O GLU 13 4.626 -19.784 37.286 1.00 0.00 O ATOM 108 N TYR 14 6.135 -19.266 35.718 1.00 0.00 N ATOM 109 CA TYR 14 5.068 -19.021 34.788 1.00 0.00 C ATOM 110 CB TYR 14 5.550 -18.557 33.401 1.00 0.00 C ATOM 111 CG TYR 14 6.051 -17.163 33.546 1.00 0.00 C ATOM 112 CD1 TYR 14 5.164 -16.113 33.475 1.00 0.00 C ATOM 113 CD2 TYR 14 7.383 -16.895 33.763 1.00 0.00 C ATOM 114 CE1 TYR 14 5.595 -14.817 33.610 1.00 0.00 C ATOM 115 CE2 TYR 14 7.821 -15.599 33.899 1.00 0.00 C ATOM 116 CZ TYR 14 6.929 -14.555 33.817 1.00 0.00 C ATOM 118 C TYR 14 4.324 -20.305 34.599 1.00 0.00 C ATOM 119 O TYR 14 3.093 -20.335 34.585 1.00 0.00 O ATOM 120 N GLN 15 5.065 -21.416 34.465 1.00 0.00 N ATOM 121 CA GLN 15 4.449 -22.696 34.266 1.00 0.00 C ATOM 122 CB GLN 15 5.515 -23.786 34.062 1.00 0.00 C ATOM 123 CG GLN 15 6.378 -23.509 32.826 1.00 0.00 C ATOM 124 CD GLN 15 7.557 -24.465 32.808 1.00 0.00 C ATOM 125 OE1 GLN 15 7.632 -25.389 33.616 1.00 0.00 O ATOM 126 NE2 GLN 15 8.507 -24.239 31.857 1.00 0.00 N ATOM 127 C GLN 15 3.652 -23.011 35.493 1.00 0.00 C ATOM 128 O GLN 15 2.546 -23.550 35.431 1.00 0.00 O ATOM 129 N GLN 16 4.216 -22.646 36.651 1.00 0.00 N ATOM 130 CA GLN 16 3.616 -22.889 37.925 1.00 0.00 C ATOM 131 CB GLN 16 4.564 -22.551 39.088 1.00 0.00 C ATOM 132 CG GLN 16 5.829 -23.416 39.035 1.00 0.00 C ATOM 133 CD GLN 16 6.692 -23.158 40.257 1.00 0.00 C ATOM 134 OE1 GLN 16 6.357 -23.574 41.365 1.00 0.00 O ATOM 135 NE2 GLN 16 7.850 -22.472 40.047 1.00 0.00 N ATOM 136 C GLN 16 2.358 -22.081 38.029 1.00 0.00 C ATOM 137 O GLN 16 1.433 -22.467 38.741 1.00 0.00 O ATOM 138 N ILE 17 2.293 -20.936 37.317 1.00 0.00 N ATOM 139 CA ILE 17 1.174 -20.037 37.363 1.00 0.00 C ATOM 140 CB ILE 17 1.266 -18.895 36.386 1.00 0.00 C ATOM 141 CG2 ILE 17 -0.105 -18.197 36.364 1.00 0.00 C ATOM 142 CG1 ILE 17 2.434 -17.947 36.708 1.00 0.00 C ATOM 143 CD1 ILE 17 2.717 -16.943 35.592 1.00 0.00 C ATOM 144 C ILE 17 -0.020 -20.816 36.954 1.00 0.00 C ATOM 145 O ILE 17 -1.094 -20.682 37.537 1.00 0.00 O ATOM 146 N LEU 18 0.156 -21.667 35.937 1.00 0.00 N ATOM 147 CA LEU 18 -0.916 -22.451 35.413 1.00 0.00 C ATOM 148 CB LEU 18 -0.395 -23.366 34.291 1.00 0.00 C ATOM 149 CG LEU 18 0.287 -22.567 33.155 1.00 0.00 C ATOM 150 CD1 LEU 18 0.823 -23.486 32.048 1.00 0.00 C ATOM 151 CD2 LEU 18 -0.647 -21.477 32.614 1.00 0.00 C ATOM 152 C LEU 18 -1.435 -23.325 36.521 1.00 0.00 C ATOM 153 O LEU 18 -2.640 -23.403 36.762 1.00 0.00 O ATOM 154 N THR 19 -0.510 -23.968 37.255 1.00 0.00 N ATOM 155 CA THR 19 -0.850 -24.883 38.311 1.00 0.00 C ATOM 156 CB THR 19 0.369 -25.498 38.940 1.00 0.00 C ATOM 157 OG1 THR 19 1.145 -26.167 37.955 1.00 0.00 O ATOM 158 CG2 THR 19 -0.080 -26.500 40.016 1.00 0.00 C ATOM 159 C THR 19 -1.566 -24.135 39.394 1.00 0.00 C ATOM 160 O THR 19 -2.531 -24.624 39.984 1.00 0.00 O ATOM 161 N LEU 20 -1.102 -22.906 39.664 1.00 0.00 N ATOM 162 CA LEU 20 -1.583 -22.085 40.732 1.00 0.00 C ATOM 163 CB LEU 20 -0.867 -20.718 40.704 1.00 0.00 C ATOM 164 CG LEU 20 -1.009 -19.839 41.961 1.00 0.00 C ATOM 165 CD1 LEU 20 -2.473 -19.577 42.331 1.00 0.00 C ATOM 166 CD2 LEU 20 -0.151 -20.382 43.114 1.00 0.00 C ATOM 167 C LEU 20 -3.037 -21.823 40.501 1.00 0.00 C ATOM 168 O LEU 20 -3.849 -21.922 41.420 1.00 0.00 O ATOM 169 N SER 21 -3.392 -21.519 39.241 1.00 0.00 N ATOM 170 CA SER 21 -4.724 -21.158 38.856 1.00 0.00 C ATOM 171 CB SER 21 -4.836 -20.971 37.332 1.00 0.00 C ATOM 172 OG SER 21 -3.875 -20.028 36.883 1.00 0.00 O ATOM 173 C SER 21 -5.658 -22.272 39.198 1.00 0.00 C ATOM 174 O SER 21 -6.697 -22.064 39.823 1.00 0.00 O ATOM 175 N GLU 22 -5.287 -23.501 38.813 1.00 0.00 N ATOM 176 CA GLU 22 -6.185 -24.601 38.979 1.00 0.00 C ATOM 177 CB GLU 22 -5.695 -25.883 38.297 1.00 0.00 C ATOM 178 CG GLU 22 -5.461 -25.683 36.796 1.00 0.00 C ATOM 179 CD GLU 22 -6.633 -24.898 36.210 1.00 0.00 C ATOM 180 OE1 GLU 22 -7.706 -25.516 35.980 1.00 0.00 O ATOM 181 OE2 GLU 22 -6.466 -23.671 35.986 1.00 0.00 O ATOM 182 C GLU 22 -6.435 -24.872 40.434 1.00 0.00 C ATOM 183 O GLU 22 -7.537 -25.273 40.802 1.00 0.00 O ATOM 184 N GLN 23 -5.419 -24.668 41.298 1.00 0.00 N ATOM 185 CA GLN 23 -5.516 -24.947 42.712 1.00 0.00 C ATOM 186 CB GLN 23 -4.177 -24.867 43.468 1.00 0.00 C ATOM 187 CG GLN 23 -4.301 -25.298 44.934 1.00 0.00 C ATOM 188 CD GLN 23 -2.909 -25.359 45.545 1.00 0.00 C ATOM 189 OE1 GLN 23 -1.958 -25.782 44.889 1.00 0.00 O ATOM 190 NE2 GLN 23 -2.782 -24.924 46.828 1.00 0.00 N ATOM 191 C GLN 23 -6.486 -24.020 43.384 1.00 0.00 C ATOM 192 O GLN 23 -7.034 -24.338 44.439 1.00 0.00 O ATOM 193 N MET 24 -6.707 -22.834 42.796 1.00 0.00 N ATOM 194 CA MET 24 -7.517 -21.804 43.385 1.00 0.00 C ATOM 195 CB MET 24 -7.656 -20.606 42.427 1.00 0.00 C ATOM 196 CG MET 24 -8.378 -19.387 43.003 1.00 0.00 C ATOM 197 SD MET 24 -8.326 -17.922 41.925 1.00 0.00 S ATOM 198 CE MET 24 -9.557 -18.518 40.731 1.00 0.00 C ATOM 199 C MET 24 -8.903 -22.312 43.682 1.00 0.00 C ATOM 200 O MET 24 -9.435 -22.037 44.757 1.00 0.00 O ATOM 201 N LEU 25 -9.523 -23.082 42.765 1.00 0.00 N ATOM 202 CA LEU 25 -10.886 -23.510 42.966 1.00 0.00 C ATOM 203 CB LEU 25 -11.371 -24.491 41.886 1.00 0.00 C ATOM 204 CG LEU 25 -11.455 -23.985 40.435 1.00 0.00 C ATOM 205 CD1 LEU 25 -11.958 -25.117 39.522 1.00 0.00 C ATOM 206 CD2 LEU 25 -12.309 -22.719 40.311 1.00 0.00 C ATOM 207 C LEU 25 -11.009 -24.325 44.214 1.00 0.00 C ATOM 208 O LEU 25 -11.818 -24.019 45.092 1.00 0.00 O ATOM 209 N VAL 26 -10.177 -25.379 44.327 1.00 0.00 N ATOM 210 CA VAL 26 -10.273 -26.348 45.386 1.00 0.00 C ATOM 211 CB VAL 26 -9.309 -27.484 45.198 1.00 0.00 C ATOM 212 CG1 VAL 26 -9.726 -28.258 43.940 1.00 0.00 C ATOM 213 CG2 VAL 26 -7.883 -26.910 45.112 1.00 0.00 C ATOM 214 C VAL 26 -10.032 -25.708 46.715 1.00 0.00 C ATOM 215 O VAL 26 -10.745 -25.973 47.680 1.00 0.00 O ATOM 216 N LEU 27 -9.024 -24.831 46.801 1.00 0.00 N ATOM 217 CA LEU 27 -8.728 -24.193 48.048 1.00 0.00 C ATOM 218 CB LEU 27 -7.486 -23.294 47.973 1.00 0.00 C ATOM 219 CG LEU 27 -6.167 -24.064 47.787 1.00 0.00 C ATOM 220 CD1 LEU 27 -4.973 -23.115 47.618 1.00 0.00 C ATOM 221 CD2 LEU 27 -5.941 -25.054 48.945 1.00 0.00 C ATOM 222 C LEU 27 -9.902 -23.347 48.428 1.00 0.00 C ATOM 223 O LEU 27 -10.215 -23.197 49.609 1.00 0.00 O ATOM 224 N ALA 28 -10.565 -22.750 47.421 1.00 0.00 N ATOM 225 CA ALA 28 -11.696 -21.903 47.646 1.00 0.00 C ATOM 226 CB ALA 28 -12.249 -21.302 46.342 1.00 0.00 C ATOM 227 C ALA 28 -12.795 -22.703 48.282 1.00 0.00 C ATOM 228 O ALA 28 -13.440 -22.231 49.216 1.00 0.00 O ATOM 229 N THR 29 -13.027 -23.944 47.808 1.00 0.00 N ATOM 230 CA THR 29 -14.100 -24.742 48.340 1.00 0.00 C ATOM 231 CB THR 29 -14.236 -26.095 47.700 1.00 0.00 C ATOM 232 OG1 THR 29 -13.121 -26.909 48.030 1.00 0.00 O ATOM 233 CG2 THR 29 -14.312 -25.924 46.177 1.00 0.00 C ATOM 234 C THR 29 -13.816 -24.999 49.782 1.00 0.00 C ATOM 235 O THR 29 -14.711 -24.939 50.627 1.00 0.00 O ATOM 236 N GLU 30 -12.539 -25.293 50.098 1.00 0.00 N ATOM 237 CA GLU 30 -12.132 -25.588 51.440 1.00 0.00 C ATOM 238 CB GLU 30 -10.637 -25.969 51.553 1.00 0.00 C ATOM 239 CG GLU 30 -10.168 -26.325 52.970 1.00 0.00 C ATOM 240 CD GLU 30 -8.702 -26.737 52.874 1.00 0.00 C ATOM 241 OE1 GLU 30 -8.214 -26.882 51.724 1.00 0.00 O ATOM 242 OE2 GLU 30 -8.058 -26.913 53.942 1.00 0.00 O ATOM 243 C GLU 30 -12.357 -24.365 52.275 1.00 0.00 C ATOM 244 O GLU 30 -12.725 -24.463 53.443 1.00 0.00 O ATOM 245 N GLY 31 -12.161 -23.170 51.692 1.00 0.00 N ATOM 246 CA GLY 31 -12.311 -21.977 52.471 1.00 0.00 C ATOM 247 C GLY 31 -10.979 -21.697 53.077 1.00 0.00 C ATOM 248 O GLY 31 -10.862 -20.941 54.040 1.00 0.00 O ATOM 249 N ASN 32 -9.933 -22.322 52.506 1.00 0.00 N ATOM 250 CA ASN 32 -8.597 -22.165 52.997 1.00 0.00 C ATOM 251 CB ASN 32 -7.698 -23.313 52.501 1.00 0.00 C ATOM 252 CG ASN 32 -6.422 -23.370 53.322 1.00 0.00 C ATOM 253 OD1 ASN 32 -5.853 -22.350 53.704 1.00 0.00 O ATOM 254 ND2 ASN 32 -5.953 -24.616 53.611 1.00 0.00 N ATOM 255 C ASN 32 -8.099 -20.884 52.407 1.00 0.00 C ATOM 256 O ASN 32 -7.406 -20.883 51.391 1.00 0.00 O ATOM 257 N TRP 33 -8.436 -19.745 53.041 1.00 0.00 N ATOM 258 CA TRP 33 -8.079 -18.479 52.469 1.00 0.00 C ATOM 259 CB TRP 33 -8.727 -17.271 53.177 1.00 0.00 C ATOM 260 CG TRP 33 -8.805 -16.057 52.275 1.00 0.00 C ATOM 261 CD2 TRP 33 -9.090 -14.711 52.692 1.00 0.00 C ATOM 262 CD1 TRP 33 -8.679 -16.018 50.918 1.00 0.00 C ATOM 263 NE1 TRP 33 -8.893 -14.744 50.458 1.00 0.00 N ATOM 264 CE2 TRP 33 -9.142 -13.926 51.538 1.00 0.00 C ATOM 265 CE3 TRP 33 -9.300 -14.170 53.931 1.00 0.00 C ATOM 266 CZ2 TRP 33 -9.407 -12.588 51.604 1.00 0.00 C ATOM 267 CZ3 TRP 33 -9.559 -12.820 53.995 1.00 0.00 C ATOM 269 C TRP 33 -6.591 -18.313 52.540 1.00 0.00 C ATOM 270 O TRP 33 -5.960 -17.835 51.599 1.00 0.00 O ATOM 271 N ASP 34 -5.987 -18.715 53.676 1.00 0.00 N ATOM 272 CA ASP 34 -4.583 -18.514 53.874 1.00 0.00 C ATOM 273 CB ASP 34 -4.116 -18.974 55.269 1.00 0.00 C ATOM 274 CG ASP 34 -2.820 -18.246 55.604 1.00 0.00 C ATOM 275 OD1 ASP 34 -1.894 -18.249 54.751 1.00 0.00 O ATOM 276 OD2 ASP 34 -2.743 -17.671 56.724 1.00 0.00 O ATOM 277 C ASP 34 -3.832 -19.294 52.836 1.00 0.00 C ATOM 278 O ASP 34 -2.900 -18.786 52.219 1.00 0.00 O ATOM 279 N ALA 35 -4.241 -20.551 52.588 1.00 0.00 N ATOM 280 CA ALA 35 -3.563 -21.380 51.628 1.00 0.00 C ATOM 281 CB ALA 35 -4.138 -22.802 51.541 1.00 0.00 C ATOM 282 C ALA 35 -3.689 -20.755 50.274 1.00 0.00 C ATOM 283 O ALA 35 -2.747 -20.785 49.481 1.00 0.00 O ATOM 284 N LEU 36 -4.866 -20.162 49.974 1.00 0.00 N ATOM 285 CA LEU 36 -5.062 -19.543 48.694 1.00 0.00 C ATOM 286 CB LEU 36 -6.401 -18.789 48.565 1.00 0.00 C ATOM 287 CG LEU 36 -7.637 -19.665 48.300 1.00 0.00 C ATOM 288 CD1 LEU 36 -8.913 -18.819 48.183 1.00 0.00 C ATOM 289 CD2 LEU 36 -7.411 -20.511 47.042 1.00 0.00 C ATOM 290 C LEU 36 -4.018 -18.489 48.519 1.00 0.00 C ATOM 291 O LEU 36 -3.343 -18.443 47.493 1.00 0.00 O ATOM 292 N VAL 37 -3.836 -17.615 49.522 1.00 0.00 N ATOM 293 CA VAL 37 -2.859 -16.578 49.376 1.00 0.00 C ATOM 294 CB VAL 37 -2.924 -15.491 50.407 1.00 0.00 C ATOM 295 CG1 VAL 37 -4.256 -14.745 50.207 1.00 0.00 C ATOM 296 CG2 VAL 37 -2.750 -16.087 51.808 1.00 0.00 C ATOM 297 C VAL 37 -1.491 -17.185 49.356 1.00 0.00 C ATOM 298 O VAL 37 -0.573 -16.640 48.746 1.00 0.00 O ATOM 299 N ASP 38 -1.324 -18.344 50.016 1.00 0.00 N ATOM 300 CA ASP 38 -0.057 -19.020 50.092 1.00 0.00 C ATOM 301 CB ASP 38 -0.132 -20.321 50.901 1.00 0.00 C ATOM 302 CG ASP 38 -0.338 -19.917 52.356 1.00 0.00 C ATOM 303 OD1 ASP 38 0.382 -18.992 52.809 1.00 0.00 O ATOM 304 OD2 ASP 38 -1.225 -20.513 53.018 1.00 0.00 O ATOM 305 C ASP 38 0.351 -19.351 48.696 1.00 0.00 C ATOM 306 O ASP 38 1.533 -19.525 48.404 1.00 0.00 O ATOM 307 N LEU 39 -0.639 -19.437 47.796 1.00 0.00 N ATOM 308 CA LEU 39 -0.376 -19.734 46.425 1.00 0.00 C ATOM 309 CB LEU 39 -1.626 -19.582 45.543 1.00 0.00 C ATOM 310 CG LEU 39 -2.757 -20.570 45.862 1.00 0.00 C ATOM 311 CD1 LEU 39 -3.983 -20.294 44.973 1.00 0.00 C ATOM 312 CD2 LEU 39 -2.283 -22.028 45.753 1.00 0.00 C ATOM 313 C LEU 39 0.587 -18.693 45.968 1.00 0.00 C ATOM 314 O LEU 39 1.504 -18.978 45.202 1.00 0.00 O ATOM 315 N GLU 40 0.413 -17.452 46.459 1.00 0.00 N ATOM 316 CA GLU 40 1.253 -16.369 46.048 1.00 0.00 C ATOM 317 CB GLU 40 0.981 -15.081 46.839 1.00 0.00 C ATOM 318 CG GLU 40 -0.407 -14.498 46.595 1.00 0.00 C ATOM 319 CD GLU 40 -0.376 -13.789 45.252 1.00 0.00 C ATOM 320 OE1 GLU 40 0.690 -13.207 44.918 1.00 0.00 O ATOM 321 OE2 GLU 40 -1.416 -13.822 44.539 1.00 0.00 O ATOM 322 C GLU 40 2.663 -16.752 46.335 1.00 0.00 C ATOM 323 O GLU 40 3.523 -16.645 45.463 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 319 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 18.00 88.5 78 72.2 108 ARMSMC SECONDARY STRUCTURE . . 12.37 95.7 69 70.4 98 ARMSMC SURFACE . . . . . . . . 18.89 87.9 66 71.7 92 ARMSMC BURIED . . . . . . . . 11.93 91.7 12 75.0 16 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 86.87 33.3 36 73.5 49 ARMSSC1 RELIABLE SIDE CHAINS . 87.52 32.4 34 73.9 46 ARMSSC1 SECONDARY STRUCTURE . . 85.08 37.5 32 72.7 44 ARMSSC1 SURFACE . . . . . . . . 90.66 30.0 30 71.4 42 ARMSSC1 BURIED . . . . . . . . 64.70 50.0 6 85.7 7 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 89.31 51.7 29 78.4 37 ARMSSC2 RELIABLE SIDE CHAINS . 86.24 58.8 17 73.9 23 ARMSSC2 SECONDARY STRUCTURE . . 88.24 53.8 26 78.8 33 ARMSSC2 SURFACE . . . . . . . . 93.06 47.8 23 74.2 31 ARMSSC2 BURIED . . . . . . . . 73.16 66.7 6 100.0 6 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 75.76 8.3 12 80.0 15 ARMSSC3 RELIABLE SIDE CHAINS . 79.39 12.5 8 72.7 11 ARMSSC3 SECONDARY STRUCTURE . . 75.46 9.1 11 78.6 14 ARMSSC3 SURFACE . . . . . . . . 82.05 0.0 10 76.9 13 ARMSSC3 BURIED . . . . . . . . 27.95 50.0 2 100.0 2 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 75.72 0.0 1 50.0 2 ARMSSC4 RELIABLE SIDE CHAINS . 75.72 0.0 1 50.0 2 ARMSSC4 SECONDARY STRUCTURE . . 75.72 0.0 1 50.0 2 ARMSSC4 SURFACE . . . . . . . . 75.72 0.0 1 50.0 2 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 5.86 (Number of atoms: 40) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 5.86 40 72.7 55 CRMSCA CRN = ALL/NP . . . . . 0.1464 CRMSCA SECONDARY STRUCTURE . . 5.59 35 71.4 49 CRMSCA SURFACE . . . . . . . . 6.12 34 72.3 47 CRMSCA BURIED . . . . . . . . 4.08 6 75.0 8 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 5.83 199 72.6 274 CRMSMC SECONDARY STRUCTURE . . 5.58 175 71.4 245 CRMSMC SURFACE . . . . . . . . 6.08 169 72.2 234 CRMSMC BURIED . . . . . . . . 4.14 30 75.0 40 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 7.27 159 73.3 217 CRMSSC RELIABLE SIDE CHAINS . 7.44 119 69.6 171 CRMSSC SECONDARY STRUCTURE . . 6.86 139 72.4 192 CRMSSC SURFACE . . . . . . . . 7.64 134 71.3 188 CRMSSC BURIED . . . . . . . . 4.81 25 86.2 29 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 6.52 319 73.0 437 CRMSALL SECONDARY STRUCTURE . . 6.18 279 71.9 388 CRMSALL SURFACE . . . . . . . . 6.83 270 71.8 376 CRMSALL BURIED . . . . . . . . 4.49 49 80.3 61 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 5.338 1.000 0.500 40 72.7 55 ERRCA SECONDARY STRUCTURE . . 5.062 1.000 0.500 35 71.4 49 ERRCA SURFACE . . . . . . . . 5.591 1.000 0.500 34 72.3 47 ERRCA BURIED . . . . . . . . 3.905 1.000 0.500 6 75.0 8 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 5.307 1.000 0.500 199 72.6 274 ERRMC SECONDARY STRUCTURE . . 5.042 1.000 0.500 175 71.4 245 ERRMC SURFACE . . . . . . . . 5.553 1.000 0.500 169 72.2 234 ERRMC BURIED . . . . . . . . 3.922 1.000 0.500 30 75.0 40 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 6.508 1.000 0.500 159 73.3 217 ERRSC RELIABLE SIDE CHAINS . 6.682 1.000 0.500 119 69.6 171 ERRSC SECONDARY STRUCTURE . . 6.080 1.000 0.500 139 72.4 192 ERRSC SURFACE . . . . . . . . 6.878 1.000 0.500 134 71.3 188 ERRSC BURIED . . . . . . . . 4.523 1.000 0.500 25 86.2 29 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 5.850 1.000 0.500 319 73.0 437 ERRALL SECONDARY STRUCTURE . . 5.502 1.000 0.500 279 71.9 388 ERRALL SURFACE . . . . . . . . 6.147 1.000 0.500 270 71.8 376 ERRALL BURIED . . . . . . . . 4.213 1.000 0.500 49 80.3 61 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 9 17 37 40 55 DISTCA CA (P) 0.00 0.00 16.36 30.91 67.27 55 DISTCA CA (RMS) 0.00 0.00 2.44 3.39 5.14 DISTCA ALL (N) 3 12 57 131 286 319 437 DISTALL ALL (P) 0.69 2.75 13.04 29.98 65.45 437 DISTALL ALL (RMS) 0.64 1.55 2.35 3.52 5.54 DISTALL END of the results output