####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 115 ( 460), selected 104 , name T0600AL285_1 # Molecule2: number of CA atoms 106 ( 873), selected 104 , name T0600.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0600AL285_1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 64 17 - 81 4.40 24.55 LCS_AVERAGE: 55.30 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 44 77 - 121 1.84 34.26 LCS_AVERAGE: 30.13 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 29 93 - 121 0.81 34.36 LCS_AVERAGE: 15.70 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 104 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT G 17 G 17 9 16 64 3 19 31 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT I 18 I 18 9 16 64 7 19 31 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT G 19 G 19 9 16 64 7 17 31 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT S 20 S 20 9 16 64 7 19 31 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT W 21 W 21 9 16 64 7 17 31 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT V 22 V 22 9 16 64 7 17 31 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT L 23 L 23 9 16 64 7 19 31 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT H 24 H 24 9 16 64 7 15 29 39 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT M 25 M 25 9 16 64 4 9 28 39 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT E 26 E 26 4 16 64 3 3 6 17 33 41 45 52 57 59 62 63 64 64 65 66 68 69 69 70 LCS_GDT S 27 S 27 3 16 64 0 3 13 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT G 28 G 28 4 17 64 5 6 15 27 41 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT R 29 R 29 4 20 64 3 10 16 18 41 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT L 30 L 30 7 20 64 3 6 9 14 24 33 48 53 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT E 31 E 31 7 20 64 3 6 11 24 35 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT W 32 W 32 11 20 64 5 9 30 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT S 33 S 33 11 20 64 7 19 31 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT Q 34 Q 34 11 20 64 7 19 31 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT A 35 A 35 11 20 64 4 19 31 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT V 36 V 36 11 20 64 3 17 31 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT H 37 H 37 11 20 64 7 17 31 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT D 38 D 38 11 20 64 5 17 31 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT I 39 I 39 11 20 64 5 18 31 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT F 40 F 40 11 20 64 7 19 31 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT G 41 G 41 11 20 64 5 15 31 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT T 42 T 42 11 20 64 4 14 29 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT D 43 D 43 11 20 64 4 9 18 34 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT S 44 S 44 10 20 64 4 8 12 20 33 45 49 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT A 45 A 45 10 20 64 3 9 12 17 31 41 47 53 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT T 46 T 46 10 20 64 3 9 12 17 24 37 47 53 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT F 47 F 47 10 20 64 3 4 10 17 22 36 47 53 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT D 48 D 48 3 28 64 3 7 12 27 35 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT A 49 A 49 4 28 64 3 3 4 5 5 11 28 50 55 59 62 63 64 64 65 66 68 69 69 70 LCS_GDT T 50 T 50 4 28 64 4 4 10 29 40 46 51 54 58 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT E 51 E 51 16 28 64 4 6 11 22 37 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT D 52 D 52 20 28 64 4 15 31 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT A 53 A 53 20 28 64 9 19 31 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT Y 54 Y 54 20 28 64 10 19 31 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT F 55 F 55 20 28 64 10 19 31 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT Q 56 Q 56 20 28 64 10 19 31 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT R 57 R 57 20 28 64 10 19 31 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT V 58 V 58 20 28 64 6 19 31 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT H 59 H 59 20 28 64 7 19 31 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT P 60 P 60 20 28 64 10 19 31 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT D 61 D 61 20 28 64 10 19 31 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT D 62 D 62 20 28 64 10 19 31 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT R 63 R 63 20 28 64 10 19 31 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT A 64 A 64 20 28 64 8 19 31 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT R 65 R 65 20 28 64 10 17 31 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT V 66 V 66 20 28 64 8 16 31 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT R 67 R 67 20 28 64 8 17 31 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT R 68 R 68 20 28 64 8 19 31 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT E 69 E 69 20 28 64 8 16 27 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT L 70 L 70 20 28 64 8 13 28 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT D 71 D 71 20 28 64 8 19 31 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT R 72 R 72 20 28 64 10 17 29 39 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT H 73 H 73 16 28 64 6 13 19 35 41 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT V 74 V 74 16 28 64 3 13 28 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT L 75 L 75 16 28 64 4 14 29 39 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT G 76 G 76 4 28 64 3 4 12 25 30 39 47 53 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT D 77 D 77 3 44 64 1 3 5 13 19 26 36 44 53 58 62 63 64 64 65 66 68 69 69 70 LCS_GDT P 79 P 79 9 44 64 6 18 31 36 39 40 42 43 43 44 45 45 46 57 62 66 68 69 69 70 LCS_GDT F 80 F 80 9 44 64 4 13 31 36 39 40 42 43 43 44 45 45 46 46 47 47 48 48 56 65 LCS_GDT D 81 D 81 9 44 64 20 27 35 37 39 40 42 43 43 44 45 45 46 46 47 47 48 48 49 49 LCS_GDT V 82 V 82 9 44 50 12 27 35 37 39 40 42 43 43 44 45 45 46 46 47 47 48 48 49 49 LCS_GDT E 83 E 83 9 44 50 16 27 35 37 39 40 42 43 43 44 45 45 46 46 47 47 48 48 49 49 LCS_GDT Y 84 Y 84 9 44 50 20 27 35 37 39 40 42 43 43 44 45 45 46 46 47 47 48 48 49 49 LCS_GDT R 85 R 85 9 44 50 20 27 35 37 39 40 42 43 43 44 45 45 46 46 47 47 48 48 49 49 LCS_GDT I 86 I 86 9 44 50 20 27 35 37 39 40 42 43 43 44 45 45 46 46 47 47 48 48 49 49 LCS_GDT V 87 V 87 9 44 50 3 20 31 35 38 40 42 43 43 44 45 45 46 46 47 47 48 48 49 49 LCS_GDT R 88 R 88 5 44 50 5 5 16 36 38 40 42 43 43 44 45 45 46 46 47 47 48 48 49 49 LCS_GDT P 89 P 89 5 44 50 5 19 34 37 39 40 42 43 43 44 45 45 46 46 47 47 48 48 49 49 LCS_GDT D 90 D 90 5 44 50 5 5 5 8 24 40 42 43 43 44 45 45 46 46 47 47 48 48 49 49 LCS_GDT G 91 G 91 5 44 50 5 24 35 37 39 40 42 43 43 44 45 45 46 46 47 47 48 48 49 49 LCS_GDT Q 92 Q 92 5 44 50 5 5 5 5 7 17 40 43 43 43 45 45 46 46 47 47 48 48 49 49 LCS_GDT V 93 V 93 29 44 50 6 24 35 37 39 40 42 43 43 44 45 45 46 46 47 47 48 48 49 49 LCS_GDT R 94 R 94 29 44 50 20 27 35 37 39 40 42 43 43 44 45 45 46 46 47 47 48 48 49 49 LCS_GDT E 95 E 95 29 44 50 20 27 35 37 39 40 42 43 43 44 45 45 46 46 47 47 48 48 49 49 LCS_GDT L 96 L 96 29 44 50 20 27 35 37 39 40 42 43 43 44 45 45 46 46 47 47 48 48 49 49 LCS_GDT L 97 L 97 29 44 50 20 27 35 37 39 40 42 43 43 44 45 45 46 46 47 47 48 48 49 49 LCS_GDT E 98 E 98 29 44 50 20 27 35 37 39 40 42 43 43 44 45 45 46 46 47 47 48 48 49 49 LCS_GDT R 99 R 99 29 44 50 19 27 35 37 39 40 42 43 43 44 45 45 46 46 47 47 48 48 49 49 LCS_GDT N 100 N 100 29 44 50 20 27 35 37 39 40 42 43 43 44 45 45 46 46 47 47 48 48 49 49 LCS_GDT H 101 H 101 29 44 50 19 27 35 37 39 40 42 43 43 44 45 45 46 46 47 47 48 48 49 49 LCS_GDT I 102 I 102 29 44 50 20 27 35 37 39 40 42 43 43 44 45 45 46 46 49 51 63 69 69 70 LCS_GDT Q 103 Q 103 29 44 50 13 27 35 37 39 40 42 43 43 44 45 45 46 46 47 47 48 64 69 70 LCS_GDT R 104 R 104 29 44 50 13 27 35 37 39 40 42 43 43 44 45 58 63 64 65 66 68 69 69 70 LCS_GDT Q 105 Q 105 29 44 50 20 27 35 37 39 40 42 43 43 44 45 45 54 64 65 66 68 69 69 70 LCS_GDT A 106 A 106 29 44 50 11 27 35 37 39 40 42 43 43 44 45 45 46 46 47 61 62 67 69 69 LCS_GDT S 107 S 107 29 44 50 10 24 35 37 39 40 42 43 51 57 62 62 64 64 65 66 68 69 69 70 LCS_GDT G 108 G 108 29 44 50 8 23 35 37 39 40 47 53 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT Q 109 Q 109 29 44 50 10 24 35 37 39 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 LCS_GDT V 110 V 110 29 44 50 10 26 35 37 39 40 42 43 43 44 45 45 55 60 65 66 68 69 69 70 LCS_GDT D 111 D 111 29 44 50 13 27 35 37 39 40 42 43 43 44 45 45 46 46 47 47 48 48 49 69 LCS_GDT H 112 H 112 29 44 50 20 27 35 37 39 40 42 43 43 44 45 45 46 46 47 47 48 48 49 49 LCS_GDT L 113 L 113 29 44 50 20 27 35 37 39 40 42 43 43 44 45 45 46 46 47 47 48 48 49 49 LCS_GDT W 114 W 114 29 44 50 20 27 35 37 39 40 42 43 43 44 45 45 46 46 47 47 48 48 49 49 LCS_GDT G 115 G 115 29 44 50 19 27 35 37 39 40 42 43 43 44 45 45 46 46 47 47 48 48 49 49 LCS_GDT T 116 T 116 29 44 50 20 27 35 37 39 40 42 43 43 44 45 45 46 46 47 47 48 48 49 49 LCS_GDT V 117 V 117 29 44 50 20 27 35 37 39 40 42 43 43 44 45 45 46 46 47 47 48 48 49 49 LCS_GDT I 118 I 118 29 44 50 20 27 35 37 39 40 42 43 43 44 45 45 46 46 47 47 48 48 49 49 LCS_GDT D 119 D 119 29 44 50 20 27 35 37 39 40 42 43 43 44 45 45 46 46 47 47 48 48 49 49 LCS_GDT M 120 M 120 29 44 50 20 27 35 37 39 40 42 43 43 44 45 45 46 46 47 47 48 48 49 49 LCS_GDT T 121 T 121 29 44 50 19 27 35 37 39 40 42 43 43 44 45 45 46 46 47 47 48 48 49 49 LCS_AVERAGE LCS_A: 33.71 ( 15.70 30.13 55.30 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 20 27 35 40 44 46 52 54 59 60 62 63 64 64 65 66 68 69 69 70 GDT PERCENT_AT 18.87 25.47 33.02 37.74 41.51 43.40 49.06 50.94 55.66 56.60 58.49 59.43 60.38 60.38 61.32 62.26 64.15 65.09 65.09 66.04 GDT RMS_LOCAL 0.36 0.48 0.83 1.25 1.43 1.54 1.88 1.99 2.50 2.53 2.66 2.77 2.94 2.94 3.19 3.37 3.83 4.09 4.09 4.39 GDT RMS_ALL_AT 33.90 33.90 34.19 25.34 25.22 25.25 25.20 25.21 25.25 25.24 25.21 25.15 25.13 25.13 25.09 25.04 24.91 24.83 24.83 24.78 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA G 17 G 17 1.550 0 0.525 0.525 3.743 72.024 72.024 LGA I 18 I 18 0.900 4 0.111 0.111 1.160 85.952 42.976 LGA G 19 G 19 1.261 0 0.046 0.046 1.261 85.952 85.952 LGA S 20 S 20 1.174 2 0.047 0.047 1.179 81.429 54.286 LGA W 21 W 21 1.340 10 0.015 0.015 1.385 81.429 23.265 LGA V 22 V 22 1.623 3 0.080 0.080 1.623 81.548 46.599 LGA L 23 L 23 0.921 4 0.128 0.128 1.313 83.690 41.845 LGA H 24 H 24 2.307 6 0.203 0.203 3.229 61.190 24.476 LGA M 25 M 25 2.925 4 0.180 0.180 4.673 49.167 24.583 LGA E 26 E 26 4.978 5 0.208 0.208 5.357 31.786 14.127 LGA S 27 S 27 2.380 2 0.026 0.026 3.514 65.595 43.730 LGA G 28 G 28 3.242 0 0.634 0.634 3.242 57.500 57.500 LGA R 29 R 29 3.157 7 0.050 0.050 3.428 53.571 19.481 LGA L 30 L 30 4.933 4 0.626 0.626 6.151 30.833 15.417 LGA E 31 E 31 3.361 5 0.018 0.018 3.373 61.548 27.354 LGA W 32 W 32 1.596 10 0.123 0.123 2.298 70.952 20.272 LGA S 33 S 33 0.359 2 0.102 0.102 0.410 100.000 66.667 LGA Q 34 Q 34 0.373 5 0.067 0.067 0.638 97.619 43.386 LGA A 35 A 35 0.933 1 0.116 0.116 1.071 88.214 70.571 LGA V 36 V 36 1.471 3 0.019 0.019 1.471 81.429 46.531 LGA H 37 H 37 1.462 6 0.019 0.019 1.462 81.429 32.571 LGA D 38 D 38 1.612 4 0.023 0.023 1.612 79.286 39.643 LGA I 39 I 39 1.023 4 0.028 0.028 1.183 85.952 42.976 LGA F 40 F 40 0.588 7 0.039 0.039 0.937 90.476 32.900 LGA G 41 G 41 1.356 0 0.038 0.038 2.071 77.381 77.381 LGA T 42 T 42 1.862 3 0.051 0.051 2.919 66.905 38.231 LGA D 43 D 43 3.000 4 0.145 0.145 4.219 48.810 24.405 LGA S 44 S 44 4.135 2 0.086 0.086 4.562 37.262 24.841 LGA A 45 A 45 5.124 1 0.145 0.145 6.130 25.238 20.190 LGA T 46 T 46 5.475 3 0.030 0.030 5.580 26.310 15.034 LGA F 47 F 47 5.307 7 0.593 0.593 5.582 26.310 9.567 LGA D 48 D 48 3.719 4 0.603 0.603 5.139 37.500 18.750 LGA A 49 A 49 5.398 1 0.625 0.625 5.582 32.262 25.810 LGA T 50 T 50 3.631 3 0.326 0.326 3.877 48.452 27.687 LGA E 51 E 51 3.394 5 0.178 0.178 3.394 53.571 23.810 LGA D 52 D 52 1.600 4 0.196 0.196 1.773 77.143 38.571 LGA A 53 A 53 1.015 1 0.105 0.105 1.277 81.429 65.143 LGA Y 54 Y 54 1.448 8 0.110 0.110 1.448 81.429 27.143 LGA F 55 F 55 1.285 7 0.118 0.118 1.779 79.286 28.831 LGA Q 56 Q 56 1.418 5 0.067 0.067 1.545 79.286 35.238 LGA R 57 R 57 1.252 7 0.104 0.104 1.460 81.429 29.610 LGA V 58 V 58 1.402 3 0.031 0.031 1.414 83.690 47.823 LGA H 59 H 59 0.963 6 0.043 0.043 1.078 88.214 35.286 LGA P 60 P 60 0.305 3 0.021 0.021 0.633 95.238 54.422 LGA D 61 D 61 0.521 4 0.146 0.146 0.948 92.857 46.429 LGA D 62 D 62 0.731 4 0.017 0.017 0.909 90.476 45.238 LGA R 63 R 63 0.530 7 0.045 0.045 0.751 95.238 34.632 LGA A 64 A 64 0.712 1 0.038 0.038 0.803 90.476 72.381 LGA R 65 R 65 1.216 7 0.037 0.037 1.216 85.952 31.255 LGA V 66 V 66 1.322 3 0.022 0.022 1.322 83.690 47.823 LGA R 67 R 67 1.108 7 0.041 0.041 1.108 88.214 32.078 LGA R 68 R 68 1.049 7 0.033 0.033 1.272 86.071 31.299 LGA E 69 E 69 2.064 5 0.027 0.027 2.110 70.952 31.534 LGA L 70 L 70 2.134 4 0.101 0.101 2.269 68.810 34.405 LGA D 71 D 71 0.664 4 0.016 0.016 0.905 95.238 47.619 LGA R 72 R 72 2.062 7 0.025 0.025 2.579 67.024 24.372 LGA H 73 H 73 3.457 6 0.066 0.066 3.457 51.786 20.714 LGA V 74 V 74 2.600 3 0.049 0.049 2.600 69.048 39.456 LGA L 75 L 75 2.123 4 0.131 0.131 3.968 62.143 31.071 LGA G 76 G 76 5.978 0 0.682 0.682 5.978 26.905 26.905 LGA D 77 D 77 7.017 4 0.148 0.148 8.018 10.476 5.238 LGA P 79 P 79 11.660 3 0.079 0.079 12.125 0.357 0.204 LGA F 80 F 80 15.911 7 0.020 0.020 19.616 0.000 0.000 LGA D 81 D 81 21.777 4 0.119 0.119 23.532 0.000 0.000 LGA V 82 V 82 28.154 3 0.104 0.104 31.356 0.000 0.000 LGA E 83 E 83 34.733 5 0.049 0.049 36.872 0.000 0.000 LGA Y 84 Y 84 41.167 8 0.023 0.023 43.945 0.000 0.000 LGA R 85 R 85 48.615 7 0.050 0.050 49.576 0.000 0.000 LGA I 86 I 86 52.134 4 0.034 0.034 56.113 0.000 0.000 LGA V 87 V 87 59.075 3 0.096 0.096 61.396 0.000 0.000 LGA R 88 R 88 63.324 7 0.652 0.652 66.916 0.000 0.000 LGA P 89 P 89 69.252 3 0.034 0.034 72.603 0.000 0.000 LGA D 90 D 90 71.216 4 0.009 0.009 71.216 0.000 0.000 LGA G 91 G 91 68.989 0 0.244 0.244 69.630 0.000 0.000 LGA Q 92 Q 92 63.325 5 0.493 0.493 65.519 0.000 0.000 LGA V 93 V 93 60.319 3 0.573 0.573 61.802 0.000 0.000 LGA R 94 R 94 54.696 7 0.055 0.055 56.654 0.000 0.000 LGA E 95 E 95 47.578 5 0.076 0.076 50.410 0.000 0.000 LGA L 96 L 96 42.660 4 0.079 0.079 44.230 0.000 0.000 LGA L 97 L 97 35.469 4 0.026 0.026 38.364 0.000 0.000 LGA E 98 E 98 31.743 5 0.057 0.057 32.767 0.000 0.000 LGA R 99 R 99 25.689 7 0.093 0.093 28.323 0.000 0.000 LGA N 100 N 100 21.940 4 0.116 0.116 22.750 0.000 0.000 LGA H 101 H 101 17.721 6 0.019 0.019 19.708 0.000 0.000 LGA I 102 I 102 13.804 4 0.060 0.060 14.697 0.000 0.000 LGA Q 103 Q 103 16.208 5 0.137 0.137 16.208 0.000 0.000 LGA R 104 R 104 11.489 7 0.057 0.057 15.199 0.000 0.000 LGA Q 105 Q 105 13.298 5 0.027 0.027 13.298 0.000 0.000 LGA A 106 A 106 15.256 1 0.111 0.111 15.256 0.000 0.000 LGA S 107 S 107 9.611 2 0.171 0.171 11.113 2.500 1.667 LGA G 108 G 108 6.606 0 0.090 0.090 7.950 28.690 28.690 LGA Q 109 Q 109 3.495 5 0.010 0.010 7.769 29.405 13.069 LGA V 110 V 110 9.497 3 0.050 0.050 11.756 2.857 1.633 LGA D 111 D 111 15.065 4 0.180 0.180 19.282 0.000 0.000 LGA H 112 H 112 20.497 6 0.042 0.042 20.497 0.000 0.000 LGA L 113 L 113 21.716 4 0.095 0.095 26.374 0.000 0.000 LGA W 114 W 114 26.879 10 0.096 0.096 26.944 0.000 0.000 LGA G 115 G 115 29.588 0 0.043 0.043 34.354 0.000 0.000 LGA T 116 T 116 34.974 3 0.013 0.013 35.306 0.000 0.000 LGA V 117 V 117 38.606 3 0.023 0.023 42.536 0.000 0.000 LGA I 118 I 118 41.854 4 0.048 0.048 43.272 0.000 0.000 LGA D 119 D 119 47.605 4 0.043 0.043 47.810 0.000 0.000 LGA M 120 M 120 45.434 4 0.114 0.114 47.547 0.000 0.000 LGA T 121 T 121 52.118 3 0.636 0.636 54.055 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 104 416 416 100.00 853 416 48.77 106 SUMMARY(RMSD_GDC): 19.019 18.977 18.977 40.423 21.742 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 115 106 4.0 54 1.99 44.104 42.669 2.579 LGA_LOCAL RMSD: 1.994 Number of atoms: 54 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 25.215 Number of assigned atoms: 104 Std_ASGN_ATOMS RMSD: 19.019 Standard rmsd on all 104 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.041645 * X + 0.939505 * Y + 0.339993 * Z + -36.960049 Y_new = -0.147230 * X + 0.342344 * Y + -0.927968 * Z + 90.633087 Z_new = -0.988225 * X + -0.011412 * Y + 0.152580 * Z + 91.597328 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.295143 1.417187 -0.074657 [DEG: -74.2062 81.1988 -4.2775 ] ZXZ: 0.351196 1.417618 -1.582344 [DEG: 20.1221 81.2235 -90.6616 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0600AL285_1 REMARK 2: T0600.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0600AL285_1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 115 106 4.0 54 1.99 42.669 19.02 REMARK ---------------------------------------------------------- MOLECULE T0600AL285_1 REMARK Aligment from pdb entry: 3eehA ATOM 1 N GLU 6 -3.642 88.697 25.679 1.00 0.00 ATOM 2 CA GLU 6 -3.857 88.493 27.147 1.00 0.00 ATOM 3 C GLU 6 -2.574 88.060 27.894 1.00 0.00 ATOM 4 O GLU 6 -2.426 88.354 29.078 1.00 0.00 ATOM 5 N LYS 7 -1.652 87.404 27.198 1.00 0.00 ATOM 6 CA LYS 7 -0.403 86.911 27.813 1.00 0.00 ATOM 7 C LYS 7 0.593 88.050 28.117 1.00 0.00 ATOM 8 O LYS 7 1.304 88.060 29.145 1.00 0.00 ATOM 9 N LEU 8 0.700 88.955 27.153 1.00 0.00 ATOM 10 CA LEU 8 1.541 90.128 27.306 1.00 0.00 ATOM 11 C LEU 8 1.039 90.936 28.506 1.00 0.00 ATOM 12 O LEU 8 1.819 91.303 29.374 1.00 0.00 ATOM 13 N LEU 9 -0.268 91.171 28.577 1.00 0.00 ATOM 14 CA LEU 9 -0.793 92.013 29.660 1.00 0.00 ATOM 15 C LEU 9 -0.477 91.335 31.002 1.00 0.00 ATOM 16 O LEU 9 -0.029 91.981 31.952 1.00 0.00 ATOM 17 N HIS 10 -0.628 90.015 31.045 1.00 0.00 ATOM 18 CA HIS 10 -0.249 89.249 32.228 1.00 0.00 ATOM 19 C HIS 10 1.231 89.490 32.563 1.00 0.00 ATOM 20 O HIS 10 1.600 89.739 33.704 1.00 0.00 ATOM 21 N THR 11 2.077 89.455 31.548 1.00 0.00 ATOM 22 CA THR 11 3.490 89.733 31.759 1.00 0.00 ATOM 23 C THR 11 3.841 91.141 32.235 1.00 0.00 ATOM 24 O THR 11 4.853 91.287 32.917 1.00 0.00 ATOM 25 N ALA 12 3.052 92.164 31.852 1.00 0.00 ATOM 26 CA ALA 12 3.213 93.533 32.379 1.00 0.00 ATOM 27 C ALA 12 2.993 93.554 33.889 1.00 0.00 ATOM 28 O ALA 12 3.611 94.342 34.607 1.00 0.00 ATOM 29 N GLU 13 2.072 92.702 34.345 1.00 0.00 ATOM 30 CA GLU 13 1.629 92.679 35.747 1.00 0.00 ATOM 31 C GLU 13 2.692 92.036 36.653 1.00 0.00 ATOM 32 O GLU 13 2.818 92.406 37.827 1.00 0.00 ATOM 33 N SER 14 3.453 91.088 36.104 1.00 0.00 ATOM 34 CA SER 14 4.581 90.494 36.814 1.00 0.00 ATOM 35 C SER 14 5.570 89.826 35.841 1.00 0.00 ATOM 36 O SER 14 5.202 88.889 35.122 1.00 0.00 ATOM 37 N ASP 15 6.811 90.320 35.826 1.00 0.00 ATOM 38 CA ASP 15 7.840 89.830 34.915 1.00 0.00 ATOM 39 C ASP 15 8.081 88.321 35.116 1.00 0.00 ATOM 40 O ASP 15 8.185 87.830 36.248 1.00 0.00 ATOM 41 N ALA 16 8.146 87.595 34.013 1.00 0.00 ATOM 42 CA ALA 16 8.327 86.149 34.083 1.00 0.00 ATOM 43 C ALA 16 9.800 85.856 34.450 1.00 0.00 ATOM 44 O ALA 16 10.715 86.593 34.059 1.00 0.00 ATOM 45 N GLY 17 9.997 84.782 35.205 1.00 0.00 ATOM 46 CA GLY 17 11.296 84.417 35.780 1.00 0.00 ATOM 47 C GLY 17 11.348 82.877 35.842 1.00 0.00 ATOM 48 O GLY 17 11.423 82.268 36.915 1.00 0.00 ATOM 49 N ILE 18 11.209 82.258 34.684 1.00 0.00 ATOM 50 CA ILE 18 11.062 80.807 34.637 1.00 0.00 ATOM 51 C ILE 18 12.408 80.152 34.875 1.00 0.00 ATOM 52 O ILE 18 13.458 80.678 34.513 1.00 0.00 ATOM 53 N GLY 19 12.364 78.978 35.464 1.00 0.00 ATOM 54 CA GLY 19 13.516 78.105 35.521 1.00 0.00 ATOM 55 C GLY 19 13.605 77.421 34.176 1.00 0.00 ATOM 56 O GLY 19 12.592 76.891 33.693 1.00 0.00 ATOM 57 N SER 20 14.796 77.402 33.586 1.00 0.00 ATOM 58 CA SER 20 15.035 76.617 32.369 1.00 0.00 ATOM 59 C SER 20 15.920 75.459 32.807 1.00 0.00 ATOM 60 O SER 20 16.919 75.657 33.551 1.00 0.00 ATOM 61 N TRP 21 15.508 74.255 32.456 1.00 0.00 ATOM 62 CA TRP 21 16.202 73.043 32.871 1.00 0.00 ATOM 63 C TRP 21 16.376 72.031 31.766 1.00 0.00 ATOM 64 O TRP 21 15.610 71.996 30.795 1.00 0.00 ATOM 65 N VAL 22 17.391 71.190 31.954 1.00 0.00 ATOM 66 CA VAL 22 17.662 70.063 31.081 1.00 0.00 ATOM 67 C VAL 22 18.584 69.086 31.783 1.00 0.00 ATOM 68 O VAL 22 19.560 69.495 32.387 1.00 0.00 ATOM 69 N LEU 23 18.244 67.805 31.719 1.00 0.00 ATOM 70 CA LEU 23 19.042 66.728 32.297 1.00 0.00 ATOM 71 C LEU 23 19.277 65.682 31.227 1.00 0.00 ATOM 72 O LEU 23 18.506 65.568 30.290 1.00 0.00 ATOM 73 N HIS 24 20.322 64.887 31.373 1.00 0.00 ATOM 74 CA HIS 24 20.398 63.642 30.642 1.00 0.00 ATOM 75 C HIS 24 19.282 62.734 31.183 1.00 0.00 ATOM 76 O HIS 24 18.836 62.892 32.324 1.00 0.00 ATOM 77 N MET 25 18.792 61.831 30.338 1.00 0.00 ATOM 78 CA MET 25 17.630 61.005 30.689 1.00 0.00 ATOM 79 C MET 25 17.912 60.063 31.878 1.00 0.00 ATOM 80 O MET 25 16.984 59.626 32.537 1.00 0.00 ATOM 81 N GLU 26 19.172 59.709 32.106 1.00 0.00 ATOM 82 CA GLU 26 19.541 58.881 33.287 1.00 0.00 ATOM 83 C GLU 26 19.874 59.729 34.538 1.00 0.00 ATOM 84 O GLU 26 20.315 59.190 35.568 1.00 0.00 ATOM 85 N SER 27 22.297 61.576 35.093 1.00 0.00 ATOM 86 CA SER 27 23.706 61.599 35.410 1.00 0.00 ATOM 87 C SER 27 24.256 63.027 35.361 1.00 0.00 ATOM 88 O SER 27 25.301 63.287 35.928 1.00 0.00 ATOM 89 N GLY 28 23.600 63.948 34.648 1.00 0.00 ATOM 90 CA GLY 28 24.093 65.322 34.655 1.00 0.00 ATOM 91 C GLY 28 23.010 66.331 34.382 1.00 0.00 ATOM 92 O GLY 28 21.989 66.028 33.729 1.00 0.00 ATOM 93 N ARG 29 23.238 67.524 34.913 1.00 0.00 ATOM 94 CA ARG 29 22.438 68.678 34.569 1.00 0.00 ATOM 95 C ARG 29 23.119 69.355 33.403 1.00 0.00 ATOM 96 O ARG 29 24.318 69.658 33.462 1.00 0.00 ATOM 97 N LEU 30 22.375 69.579 32.327 1.00 0.00 ATOM 98 CA LEU 30 22.920 70.240 31.149 1.00 0.00 ATOM 99 C LEU 30 22.551 71.700 31.162 1.00 0.00 ATOM 100 O LEU 30 23.335 72.539 30.697 1.00 0.00 ATOM 101 N GLU 31 21.350 72.021 31.646 1.00 0.00 ATOM 102 CA GLU 31 20.890 73.409 31.694 1.00 0.00 ATOM 103 C GLU 31 20.210 73.648 33.035 1.00 0.00 ATOM 104 O GLU 31 19.381 72.837 33.471 1.00 0.00 ATOM 105 N TRP 32 20.589 74.738 33.693 1.00 0.00 ATOM 106 CA TRP 32 19.871 75.221 34.881 1.00 0.00 ATOM 107 C TRP 32 20.224 76.670 35.072 1.00 0.00 ATOM 108 O TRP 32 21.394 77.067 34.914 1.00 0.00 ATOM 109 N SER 33 19.234 77.511 35.320 1.00 0.00 ATOM 110 CA SER 33 19.508 78.923 35.591 1.00 0.00 ATOM 111 C SER 33 19.337 79.312 37.077 1.00 0.00 ATOM 112 O SER 33 18.857 78.526 37.879 1.00 0.00 ATOM 113 N GLN 34 19.674 80.551 37.425 1.00 0.00 ATOM 114 CA GLN 34 19.723 80.953 38.815 1.00 0.00 ATOM 115 C GLN 34 18.334 81.090 39.457 1.00 0.00 ATOM 116 O GLN 34 18.225 81.014 40.693 1.00 0.00 ATOM 117 N ALA 35 17.281 81.223 38.648 1.00 0.00 ATOM 118 CA ALA 35 15.882 81.224 39.170 1.00 0.00 ATOM 119 C ALA 35 15.569 80.001 40.048 1.00 0.00 ATOM 120 O ALA 35 14.668 80.045 40.893 1.00 0.00 ATOM 121 N VAL 36 16.281 78.906 39.785 1.00 0.00 ATOM 122 CA VAL 36 16.111 77.650 40.528 1.00 0.00 ATOM 123 C VAL 36 16.323 77.856 42.015 1.00 0.00 ATOM 124 O VAL 36 15.562 77.351 42.818 1.00 0.00 ATOM 125 N HIS 37 17.325 78.640 42.370 1.00 0.00 ATOM 126 CA HIS 37 17.710 78.780 43.767 1.00 0.00 ATOM 127 C HIS 37 16.616 79.377 44.654 1.00 0.00 ATOM 128 O HIS 37 16.307 78.797 45.700 1.00 0.00 ATOM 129 N ASP 38 15.971 80.461 44.248 1.00 0.00 ATOM 130 CA ASP 38 14.924 81.024 45.113 1.00 0.00 ATOM 131 C ASP 38 13.670 80.164 45.156 1.00 0.00 ATOM 132 O ASP 38 13.093 79.996 46.208 1.00 0.00 ATOM 133 N ILE 39 13.288 79.589 44.017 1.00 0.00 ATOM 134 CA ILE 39 12.046 78.856 43.964 1.00 0.00 ATOM 135 C ILE 39 12.197 77.513 44.696 1.00 0.00 ATOM 136 O ILE 39 11.341 77.148 45.494 1.00 0.00 ATOM 137 N PHE 40 13.273 76.768 44.401 1.00 0.00 ATOM 138 CA PHE 40 13.460 75.438 44.964 1.00 0.00 ATOM 139 C PHE 40 14.016 75.518 46.375 1.00 0.00 ATOM 140 O PHE 40 13.867 74.589 47.156 1.00 0.00 ATOM 141 N GLY 41 14.686 76.611 46.703 1.00 0.00 ATOM 142 CA GLY 41 15.356 76.728 47.989 1.00 0.00 ATOM 143 C GLY 41 16.611 75.875 48.138 1.00 0.00 ATOM 144 O GLY 41 17.015 75.556 49.280 1.00 0.00 ATOM 145 N THR 42 17.233 75.537 47.007 1.00 0.00 ATOM 146 CA THR 42 18.451 74.723 46.961 1.00 0.00 ATOM 147 C THR 42 19.439 75.317 45.953 1.00 0.00 ATOM 148 O THR 42 19.037 76.085 45.067 1.00 0.00 ATOM 149 N ASP 43 20.721 74.954 46.062 1.00 0.00 ATOM 150 CA ASP 43 21.739 75.601 45.247 1.00 0.00 ATOM 151 C ASP 43 21.931 74.892 43.922 1.00 0.00 ATOM 152 O ASP 43 21.735 73.691 43.804 1.00 0.00 ATOM 153 N SER 44 22.280 75.679 42.919 1.00 0.00 ATOM 154 CA SER 44 22.626 75.179 41.612 1.00 0.00 ATOM 155 C SER 44 23.922 74.369 41.727 1.00 0.00 ATOM 156 O SER 44 24.052 73.330 41.098 1.00 0.00 ATOM 157 N ALA 45 24.875 74.830 42.542 1.00 0.00 ATOM 158 CA ALA 45 26.122 74.074 42.778 1.00 0.00 ATOM 159 C ALA 45 25.827 72.642 43.227 1.00 0.00 ATOM 160 O ALA 45 26.465 71.701 42.720 1.00 0.00 ATOM 161 N THR 46 24.900 72.481 44.189 1.00 0.00 ATOM 162 CA THR 46 24.545 71.146 44.694 1.00 0.00 ATOM 163 C THR 46 23.909 70.324 43.607 1.00 0.00 ATOM 164 O THR 46 24.174 69.121 43.513 1.00 0.00 ATOM 165 N PHE 47 23.047 70.948 42.811 1.00 0.00 ATOM 166 CA PHE 47 22.383 70.235 41.708 1.00 0.00 ATOM 167 C PHE 47 23.388 69.695 40.690 1.00 0.00 ATOM 168 O PHE 47 23.270 68.568 40.217 1.00 0.00 ATOM 169 N ASP 48 24.344 70.518 40.312 1.00 0.00 ATOM 170 CA ASP 48 25.358 70.073 39.362 1.00 0.00 ATOM 171 C ASP 48 26.142 68.846 39.873 1.00 0.00 ATOM 172 O ASP 48 26.372 67.881 39.125 1.00 0.00 ATOM 173 N ALA 49 26.499 68.872 41.157 1.00 0.00 ATOM 174 CA ALA 49 27.202 67.758 41.782 1.00 0.00 ATOM 175 C ALA 49 26.299 66.536 41.989 1.00 0.00 ATOM 176 O ALA 49 26.786 65.416 41.928 1.00 0.00 ATOM 177 N THR 50 25.003 66.741 42.244 1.00 0.00 ATOM 178 CA THR 50 24.026 65.633 42.341 1.00 0.00 ATOM 179 C THR 50 22.734 66.027 41.629 1.00 0.00 ATOM 180 O THR 50 21.849 66.665 42.232 1.00 0.00 ATOM 181 N GLU 51 22.621 65.666 40.352 1.00 0.00 ATOM 182 CA GLU 51 21.441 66.054 39.556 1.00 0.00 ATOM 183 C GLU 51 20.100 65.534 40.067 1.00 0.00 ATOM 184 O GLU 51 19.081 66.055 39.673 1.00 0.00 ATOM 185 N ASP 52 20.092 64.531 40.940 1.00 0.00 ATOM 186 CA ASP 52 18.858 64.098 41.595 1.00 0.00 ATOM 187 C ASP 52 18.424 65.018 42.738 1.00 0.00 ATOM 188 O ASP 52 17.354 64.826 43.297 1.00 0.00 ATOM 189 N ALA 53 19.248 65.984 43.123 1.00 0.00 ATOM 190 CA ALA 53 18.955 66.788 44.327 1.00 0.00 ATOM 191 C ALA 53 17.645 67.579 44.261 1.00 0.00 ATOM 192 O ALA 53 17.043 67.860 45.309 1.00 0.00 ATOM 193 N TYR 54 17.194 67.956 43.063 1.00 0.00 ATOM 194 CA TYR 54 15.943 68.694 42.955 1.00 0.00 ATOM 195 C TYR 54 14.760 67.909 43.519 1.00 0.00 ATOM 196 O TYR 54 13.762 68.510 43.948 1.00 0.00 ATOM 197 N PHE 55 14.844 66.579 43.526 1.00 0.00 ATOM 198 CA PHE 55 13.742 65.754 44.068 1.00 0.00 ATOM 199 C PHE 55 13.511 66.004 45.555 1.00 0.00 ATOM 200 O PHE 55 12.392 65.932 46.029 1.00 0.00 ATOM 201 N GLN 56 14.572 66.327 46.276 1.00 0.00 ATOM 202 CA GLN 56 14.452 66.654 47.680 1.00 0.00 ATOM 203 C GLN 56 13.709 67.946 47.951 1.00 0.00 ATOM 204 O GLN 56 13.269 68.211 49.099 1.00 0.00 ATOM 205 N ARG 57 13.594 68.782 46.924 1.00 0.00 ATOM 206 CA ARG 57 12.859 70.011 47.042 1.00 0.00 ATOM 207 C ARG 57 11.407 69.861 46.664 1.00 0.00 ATOM 208 O ARG 57 10.677 70.842 46.700 1.00 0.00 ATOM 209 N VAL 58 11.002 68.666 46.252 1.00 0.00 ATOM 210 CA VAL 58 9.606 68.401 45.863 1.00 0.00 ATOM 211 C VAL 58 8.882 67.667 46.982 1.00 0.00 ATOM 212 O VAL 58 9.449 66.777 47.625 1.00 0.00 ATOM 213 N HIS 59 7.648 68.077 47.260 1.00 0.00 ATOM 214 CA HIS 59 6.859 67.487 48.326 1.00 0.00 ATOM 215 C HIS 59 6.849 65.971 48.083 1.00 0.00 ATOM 216 O HIS 59 6.722 65.537 46.908 1.00 0.00 ATOM 217 N PRO 60 6.967 65.182 49.154 1.00 0.00 ATOM 218 CA PRO 60 7.115 63.732 48.956 1.00 0.00 ATOM 219 C PRO 60 5.934 63.084 48.207 1.00 0.00 ATOM 220 O PRO 60 6.133 62.129 47.481 1.00 0.00 ATOM 221 N ASP 61 4.739 63.630 48.357 1.00 0.00 ATOM 222 CA ASP 61 3.586 63.149 47.596 1.00 0.00 ATOM 223 C ASP 61 3.775 63.358 46.100 1.00 0.00 ATOM 224 O ASP 61 3.461 62.467 45.320 1.00 0.00 ATOM 225 N ASP 62 4.362 64.478 45.694 1.00 0.00 ATOM 226 CA ASP 62 4.561 64.772 44.252 1.00 0.00 ATOM 227 C ASP 62 5.800 64.116 43.662 1.00 0.00 ATOM 228 O ASP 62 5.919 63.959 42.446 1.00 0.00 ATOM 229 N ARG 63 6.733 63.709 44.519 1.00 0.00 ATOM 230 CA ARG 63 7.841 62.839 44.034 1.00 0.00 ATOM 231 C ARG 63 7.449 61.624 43.178 1.00 0.00 ATOM 232 O ARG 63 8.110 61.367 42.190 1.00 0.00 ATOM 233 N ALA 64 6.383 60.883 43.489 1.00 0.00 ATOM 234 CA ALA 64 5.985 59.747 42.623 1.00 0.00 ATOM 235 C ALA 64 5.305 60.171 41.333 1.00 0.00 ATOM 236 O ALA 64 5.442 59.496 40.282 1.00 0.00 ATOM 237 N ARG 65 4.580 61.280 41.359 1.00 0.00 ATOM 238 CA ARG 65 4.105 61.837 40.130 1.00 0.00 ATOM 239 C ARG 65 5.295 62.032 39.197 1.00 0.00 ATOM 240 O ARG 65 5.130 61.903 37.983 1.00 0.00 ATOM 241 N VAL 66 6.465 62.409 39.733 1.00 0.00 ATOM 242 CA VAL 66 7.627 62.650 38.864 1.00 0.00 ATOM 243 C VAL 66 8.053 61.366 38.115 1.00 0.00 ATOM 244 O VAL 66 8.484 61.444 36.970 1.00 0.00 ATOM 245 N ARG 67 7.937 60.204 38.761 1.00 0.00 ATOM 246 CA ARG 67 8.219 58.910 38.103 1.00 0.00 ATOM 247 C ARG 67 7.337 58.725 36.875 1.00 0.00 ATOM 248 O ARG 67 7.826 58.370 35.804 1.00 0.00 ATOM 249 N ARG 68 6.052 59.014 37.019 1.00 0.00 ATOM 250 CA ARG 68 5.113 58.954 35.902 1.00 0.00 ATOM 251 C ARG 68 5.507 59.953 34.806 1.00 0.00 ATOM 252 O ARG 68 5.432 59.647 33.612 1.00 0.00 ATOM 253 N GLU 69 5.917 61.155 35.218 1.00 0.00 ATOM 254 CA GLU 69 6.366 62.160 34.279 1.00 0.00 ATOM 255 C GLU 69 7.567 61.655 33.471 1.00 0.00 ATOM 256 O GLU 69 7.554 61.743 32.233 1.00 0.00 ATOM 257 N LEU 70 8.570 61.114 34.144 1.00 0.00 ATOM 258 CA LEU 70 9.787 60.645 33.438 1.00 0.00 ATOM 259 C LEU 70 9.444 59.501 32.477 1.00 0.00 ATOM 260 O LEU 70 9.965 59.426 31.354 1.00 0.00 ATOM 261 N ASP 71 8.575 58.599 32.932 1.00 0.00 ATOM 262 CA ASP 71 8.125 57.519 32.070 1.00 0.00 ATOM 263 C ASP 71 7.452 58.046 30.788 1.00 0.00 ATOM 264 O ASP 71 7.747 57.544 29.687 1.00 0.00 ATOM 265 N ARG 72 6.567 59.032 30.910 1.00 0.00 ATOM 266 CA ARG 72 5.959 59.681 29.724 1.00 0.00 ATOM 267 C ARG 72 7.004 60.220 28.758 1.00 0.00 ATOM 268 O ARG 72 6.908 59.992 27.541 1.00 0.00 ATOM 269 N HIS 73 8.017 60.878 29.296 1.00 0.00 ATOM 270 CA HIS 73 9.085 61.445 28.501 1.00 0.00 ATOM 271 C HIS 73 9.887 60.372 27.790 1.00 0.00 ATOM 272 O HIS 73 10.234 60.510 26.660 1.00 0.00 ATOM 273 N VAL 74 10.133 59.284 28.469 1.00 0.00 ATOM 274 CA VAL 74 10.818 58.172 27.865 1.00 0.00 ATOM 275 C VAL 74 10.031 57.467 26.819 1.00 0.00 ATOM 276 O VAL 74 10.604 56.881 25.968 1.00 0.00 ATOM 277 N LEU 75 8.722 57.560 26.883 1.00 0.00 ATOM 278 CA LEU 75 7.856 57.032 25.862 1.00 0.00 ATOM 279 C LEU 75 7.684 58.009 24.725 1.00 0.00 ATOM 280 O LEU 75 6.887 57.789 23.852 1.00 0.00 ATOM 281 N GLY 76 8.427 59.104 24.759 1.00 0.00 ATOM 282 CA GLY 76 8.444 60.066 23.654 1.00 0.00 ATOM 283 C GLY 76 7.360 61.126 23.724 1.00 0.00 ATOM 284 O GLY 76 7.206 61.886 22.785 1.00 0.00 ATOM 285 N ASP 77 6.659 61.220 24.855 1.00 0.00 ATOM 286 CA ASP 77 5.578 62.189 25.033 1.00 0.00 ATOM 287 C ASP 77 6.037 63.430 25.801 1.00 0.00 ATOM 288 O ASP 77 6.934 63.368 26.623 1.00 0.00 ATOM 289 N PRO 79 5.397 64.554 25.554 1.00 0.00 ATOM 290 CA PRO 79 5.658 65.730 26.366 1.00 0.00 ATOM 291 C PRO 79 4.892 65.568 27.668 1.00 0.00 ATOM 292 O PRO 79 3.965 64.786 27.744 1.00 0.00 ATOM 293 N PHE 80 5.291 66.278 28.704 1.00 0.00 ATOM 294 CA PHE 80 4.603 66.170 29.969 1.00 0.00 ATOM 295 C PHE 80 4.411 67.555 30.587 1.00 0.00 ATOM 296 O PHE 80 5.111 68.537 30.249 1.00 0.00 ATOM 297 N ASP 81 3.428 67.614 31.466 1.00 0.00 ATOM 298 CA ASP 81 2.916 68.877 32.014 1.00 0.00 ATOM 299 C ASP 81 2.432 68.437 33.378 1.00 0.00 ATOM 300 O ASP 81 1.565 67.531 33.454 1.00 0.00 ATOM 301 N VAL 82 3.018 69.004 34.431 1.00 0.00 ATOM 302 CA VAL 82 2.657 68.664 35.795 1.00 0.00 ATOM 303 C VAL 82 2.721 69.881 36.712 1.00 0.00 ATOM 304 O VAL 82 3.397 70.874 36.418 1.00 0.00 ATOM 305 N GLU 83 2.013 69.804 37.822 1.00 0.00 ATOM 306 CA GLU 83 2.073 70.834 38.824 1.00 0.00 ATOM 307 C GLU 83 2.465 70.163 40.113 1.00 0.00 ATOM 308 O GLU 83 1.865 69.137 40.465 1.00 0.00 ATOM 309 N TYR 84 3.402 70.746 40.849 1.00 0.00 ATOM 310 CA TYR 84 3.829 70.130 42.096 1.00 0.00 ATOM 311 C TYR 84 4.260 71.150 43.115 1.00 0.00 ATOM 312 O TYR 84 4.518 72.320 42.777 1.00 0.00 ATOM 313 N ARG 85 4.311 70.692 44.362 1.00 0.00 ATOM 314 CA ARG 85 4.674 71.509 45.490 1.00 0.00 ATOM 315 C ARG 85 6.176 71.435 45.732 1.00 0.00 ATOM 316 O ARG 85 6.758 70.335 45.727 1.00 0.00 ATOM 317 N ILE 86 6.802 72.593 45.948 1.00 0.00 ATOM 318 CA ILE 86 8.251 72.657 46.046 1.00 0.00 ATOM 319 C ILE 86 8.691 73.581 47.173 1.00 0.00 ATOM 320 O ILE 86 7.914 74.424 47.657 1.00 0.00 ATOM 321 N VAL 87 9.938 73.350 47.586 1.00 0.00 ATOM 322 CA VAL 87 10.735 74.178 48.493 1.00 0.00 ATOM 323 C VAL 87 10.562 73.668 49.916 1.00 0.00 ATOM 324 O VAL 87 9.647 74.068 50.642 1.00 0.00 ATOM 325 N ARG 88 11.464 72.771 50.288 1.00 0.00 ATOM 326 CA ARG 88 11.378 72.080 51.573 1.00 0.00 ATOM 327 C ARG 88 11.569 73.070 52.708 1.00 0.00 ATOM 328 O ARG 88 11.007 72.876 53.769 1.00 0.00 ATOM 329 N PRO 89 12.346 74.132 52.495 1.00 0.00 ATOM 330 CA PRO 89 12.603 75.109 53.557 1.00 0.00 ATOM 331 C PRO 89 11.311 75.882 53.888 1.00 0.00 ATOM 332 O PRO 89 11.059 76.234 55.043 1.00 0.00 ATOM 333 N ASP 90 10.447 76.052 52.900 1.00 0.00 ATOM 334 CA ASP 90 9.158 76.715 53.076 1.00 0.00 ATOM 335 C ASP 90 7.996 75.719 53.252 1.00 0.00 ATOM 336 O ASP 90 6.844 76.034 52.948 1.00 0.00 ATOM 337 N GLY 91 8.308 74.537 53.761 1.00 0.00 ATOM 338 CA GLY 91 7.354 73.443 53.944 1.00 0.00 ATOM 339 C GLY 91 6.533 73.169 52.703 1.00 0.00 ATOM 340 O GLY 91 5.328 72.927 52.775 1.00 0.00 ATOM 341 N GLN 92 7.210 73.217 51.557 1.00 0.00 ATOM 342 CA GLN 92 6.623 72.938 50.283 1.00 0.00 ATOM 343 C GLN 92 5.398 73.788 49.965 1.00 0.00 ATOM 344 O GLN 92 4.468 73.315 49.332 1.00 0.00 ATOM 345 N VAL 93 5.443 75.058 50.328 1.00 0.00 ATOM 346 CA VAL 93 4.287 75.939 50.083 1.00 0.00 ATOM 347 C VAL 93 4.328 76.617 48.705 1.00 0.00 ATOM 348 O VAL 93 3.428 77.367 48.381 1.00 0.00 ATOM 349 N ARG 94 5.345 76.352 47.889 1.00 0.00 ATOM 350 CA ARG 94 5.316 76.888 46.552 1.00 0.00 ATOM 351 C ARG 94 4.699 75.880 45.632 1.00 0.00 ATOM 352 O ARG 94 4.879 74.680 45.856 1.00 0.00 ATOM 353 N GLU 95 3.942 76.362 44.639 1.00 0.00 ATOM 354 CA GLU 95 3.464 75.518 43.550 1.00 0.00 ATOM 355 C GLU 95 4.187 75.929 42.306 1.00 0.00 ATOM 356 O GLU 95 4.297 77.144 42.000 1.00 0.00 ATOM 357 N LEU 96 4.634 74.916 41.551 1.00 0.00 ATOM 358 CA LEU 96 5.361 75.083 40.326 1.00 0.00 ATOM 359 C LEU 96 4.685 74.305 39.215 1.00 0.00 ATOM 360 O LEU 96 4.204 73.157 39.427 1.00 0.00 ATOM 361 N LEU 97 4.595 74.938 38.049 1.00 0.00 ATOM 362 CA LEU 97 4.120 74.325 36.827 1.00 0.00 ATOM 363 C LEU 97 5.340 73.952 35.984 1.00 0.00 ATOM 364 O LEU 97 6.192 74.818 35.655 1.00 0.00 ATOM 365 N GLU 98 5.451 72.662 35.672 1.00 0.00 ATOM 366 CA GLU 98 6.606 72.120 34.916 1.00 0.00 ATOM 367 C GLU 98 6.084 71.583 33.600 1.00 0.00 ATOM 368 O GLU 98 5.085 70.849 33.543 1.00 0.00 ATOM 369 N ARG 99 6.749 71.955 32.501 1.00 0.00 ATOM 370 CA ARG 99 6.479 71.355 31.226 1.00 0.00 ATOM 371 C ARG 99 7.818 70.838 30.696 1.00 0.00 ATOM 372 O ARG 99 8.834 71.538 30.781 1.00 0.00 ATOM 373 N ASN 100 7.800 69.606 30.189 1.00 0.00 ATOM 374 CA ASN 100 8.993 68.937 29.695 1.00 0.00 ATOM 375 C ASN 100 8.728 68.263 28.364 1.00 0.00 ATOM 376 O ASN 100 7.581 67.885 28.042 1.00 0.00 ATOM 377 N HIS 101 9.802 68.164 27.594 1.00 0.00 ATOM 378 CA HIS 101 9.833 67.479 26.316 1.00 0.00 ATOM 379 C HIS 101 11.087 66.603 26.218 1.00 0.00 ATOM 380 O HIS 101 12.136 66.954 26.761 1.00 0.00 ATOM 381 N ILE 102 10.977 65.484 25.492 1.00 0.00 ATOM 382 CA ILE 102 12.089 64.589 25.266 1.00 0.00 ATOM 383 C ILE 102 12.964 65.058 24.100 1.00 0.00 ATOM 384 O ILE 102 12.448 65.642 23.134 1.00 0.00 ATOM 385 N GLN 103 14.270 64.861 24.224 1.00 0.00 ATOM 386 CA GLN 103 15.207 65.087 23.116 1.00 0.00 ATOM 387 C GLN 103 15.768 63.687 22.835 1.00 0.00 ATOM 388 O GLN 103 16.215 62.977 23.741 1.00 0.00 ATOM 389 N ARG 104 15.712 63.270 21.588 1.00 0.00 ATOM 390 CA ARG 104 15.987 61.882 21.253 1.00 0.00 ATOM 391 C ARG 104 17.285 61.694 20.475 1.00 0.00 ATOM 392 O ARG 104 17.834 62.636 19.892 1.00 0.00 ATOM 393 N GLN 105 17.803 60.471 20.488 1.00 0.00 ATOM 394 CA GLN 105 18.995 60.154 19.724 1.00 0.00 ATOM 395 C GLN 105 18.598 59.657 18.351 1.00 0.00 ATOM 396 O GLN 105 17.424 59.671 17.999 1.00 0.00 ATOM 397 N ALA 106 19.575 59.155 17.602 1.00 0.00 ATOM 398 CA ALA 106 19.329 58.581 16.257 1.00 0.00 ATOM 399 C ALA 106 18.266 57.465 16.219 1.00 0.00 ATOM 400 O ALA 106 17.555 57.323 15.214 1.00 0.00 ATOM 401 N SER 107 18.153 56.696 17.300 1.00 0.00 ATOM 402 CA SER 107 17.244 55.560 17.331 1.00 0.00 ATOM 403 C SER 107 15.885 55.925 17.912 1.00 0.00 ATOM 404 O SER 107 15.055 55.053 18.115 1.00 0.00 ATOM 405 N GLY 108 15.654 57.206 18.204 1.00 0.00 ATOM 406 CA GLY 108 14.360 57.627 18.684 1.00 0.00 ATOM 407 C GLY 108 14.236 57.476 20.193 1.00 0.00 ATOM 408 O GLY 108 13.168 57.690 20.739 1.00 0.00 ATOM 409 N GLN 109 15.327 57.123 20.874 1.00 0.00 ATOM 410 CA GLN 109 15.295 56.957 22.323 1.00 0.00 ATOM 411 C GLN 109 15.459 58.318 22.997 1.00 0.00 ATOM 412 O GLN 109 16.256 59.139 22.568 1.00 0.00 ATOM 413 N VAL 110 14.731 58.541 24.075 1.00 0.00 ATOM 414 CA VAL 110 14.854 59.768 24.840 1.00 0.00 ATOM 415 C VAL 110 16.193 59.749 25.572 1.00 0.00 ATOM 416 O VAL 110 16.432 58.858 26.386 1.00 0.00 ATOM 417 N ASP 111 17.066 60.723 25.272 1.00 0.00 ATOM 418 CA ASP 111 18.388 60.786 25.890 1.00 0.00 ATOM 419 C ASP 111 18.606 62.031 26.745 1.00 0.00 ATOM 420 O ASP 111 19.472 62.043 27.608 1.00 0.00 ATOM 421 N HIS 112 17.779 63.055 26.544 1.00 0.00 ATOM 422 CA HIS 112 17.776 64.257 27.368 1.00 0.00 ATOM 423 C HIS 112 16.339 64.667 27.555 1.00 0.00 ATOM 424 O HIS 112 15.475 64.362 26.731 1.00 0.00 ATOM 425 N LEU 113 16.083 65.379 28.631 1.00 0.00 ATOM 426 CA LEU 113 14.750 65.912 28.907 1.00 0.00 ATOM 427 C LEU 113 14.931 67.385 29.236 1.00 0.00 ATOM 428 O LEU 113 15.867 67.772 29.957 1.00 0.00 ATOM 429 N TRP 114 14.036 68.208 28.710 1.00 0.00 ATOM 430 CA TRP 114 14.203 69.647 28.790 1.00 0.00 ATOM 431 C TRP 114 12.887 70.367 28.926 1.00 0.00 ATOM 432 O TRP 114 11.898 69.962 28.340 1.00 0.00 ATOM 433 N GLY 115 12.890 71.478 29.645 1.00 0.00 ATOM 434 CA GLY 115 11.677 72.290 29.756 1.00 0.00 ATOM 435 C GLY 115 11.847 73.487 30.659 1.00 0.00 ATOM 436 O GLY 115 12.973 74.008 30.861 1.00 0.00 ATOM 437 N THR 116 10.723 73.928 31.220 1.00 0.00 ATOM 438 CA THR 116 10.721 75.058 32.116 1.00 0.00 ATOM 439 C THR 116 9.966 74.694 33.363 1.00 0.00 ATOM 440 O THR 116 9.254 73.695 33.401 1.00 0.00 ATOM 441 N VAL 117 10.151 75.506 34.391 1.00 0.00 ATOM 442 CA VAL 117 9.349 75.393 35.618 1.00 0.00 ATOM 443 C VAL 117 9.020 76.831 36.045 1.00 0.00 ATOM 444 O VAL 117 9.896 77.704 36.081 1.00 0.00 ATOM 445 N ILE 118 7.738 77.097 36.288 1.00 0.00 ATOM 446 CA ILE 118 7.280 78.427 36.652 1.00 0.00 ATOM 447 C ILE 118 6.578 78.374 37.999 1.00 0.00 ATOM 448 O ILE 118 5.749 77.493 38.249 1.00 0.00 ATOM 449 N ASP 119 6.952 79.304 38.874 1.00 0.00 ATOM 450 CA ASP 119 6.348 79.450 40.189 1.00 0.00 ATOM 451 C ASP 119 4.954 80.028 39.956 1.00 0.00 ATOM 452 O ASP 119 4.825 81.164 39.512 1.00 0.00 ATOM 453 N MET 120 3.913 79.258 40.234 1.00 0.00 ATOM 454 CA MET 120 2.516 79.709 40.096 1.00 0.00 ATOM 455 C MET 120 1.812 79.916 41.441 1.00 0.00 ATOM 456 O MET 120 0.601 79.970 41.526 1.00 0.00 ATOM 457 N THR 121 2.615 79.901 42.488 1.00 0.00 ATOM 458 CA THR 121 2.453 80.613 43.792 1.00 0.00 ATOM 459 C THR 121 3.158 79.982 44.971 1.00 0.00 ATOM 460 O THR 121 4.196 79.257 44.717 1.00 0.00 END ########################## # # # ACE results: # # # ########################## # WARNING! TARGET 873 atoms, MODEL 540 atoms, 436 common with TARGET Number of atoms possible to evaluate: 416 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 45.49 81.9 204 97.1 210 ARMSMC SECONDARY STRUCTURE . . 28.11 92.3 130 100.0 130 ARMSMC SURFACE . . . . . . . . 43.33 81.8 170 96.6 176 ARMSMC BURIED . . . . . . . . 55.06 82.4 34 100.0 34 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 92 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 82 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 61 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 79 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 13 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 72 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 58 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 51 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 63 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 9 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 29 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 23 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 20 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 28 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 1 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 13 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 13 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 11 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 12 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 1 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 19.02 (Number of atoms: 104) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 19.02 104 98.1 106 CRMSCA CRN = ALL/NP . . . . . 0.1829 CRMSCA SECONDARY STRUCTURE . . 16.95 65 100.0 65 CRMSCA SURFACE . . . . . . . . 19.55 87 97.8 89 CRMSCA BURIED . . . . . . . . 16.00 17 100.0 17 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 18.98 416 79.7 522 CRMSMC SECONDARY STRUCTURE . . 17.05 260 80.2 324 CRMSMC SURFACE . . . . . . . . 19.49 348 79.5 438 CRMSMC BURIED . . . . . . . . 16.12 68 81.0 84 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 0.00 0 0.0 449 CRMSSC RELIABLE SIDE CHAINS . 0.00 0 0.0 377 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 324 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 382 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 67 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 18.98 416 47.7 873 CRMSALL SECONDARY STRUCTURE . . 17.05 260 44.5 584 CRMSALL SURFACE . . . . . . . . 19.49 348 47.2 738 CRMSALL BURIED . . . . . . . . 16.12 68 50.4 135 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 17.075 1.000 0.500 104 98.1 106 ERRCA SECONDARY STRUCTURE . . 15.761 1.000 0.500 65 100.0 65 ERRCA SURFACE . . . . . . . . 17.490 1.000 0.500 87 97.8 89 ERRCA BURIED . . . . . . . . 14.950 1.000 0.500 17 100.0 17 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 17.056 1.000 0.500 416 79.7 522 ERRMC SECONDARY STRUCTURE . . 15.835 1.000 0.500 260 80.2 324 ERRMC SURFACE . . . . . . . . 17.423 1.000 0.500 348 79.5 438 ERRMC BURIED . . . . . . . . 15.179 1.000 0.500 68 81.0 84 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.000 0.000 0.000 0 0.0 449 ERRSC RELIABLE SIDE CHAINS . 0.000 0.000 0.000 0 0.0 377 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 324 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 382 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 67 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 17.056 1.000 0.500 416 47.7 873 ERRALL SECONDARY STRUCTURE . . 15.835 1.000 0.500 260 44.5 584 ERRALL SURFACE . . . . . . . . 17.423 1.000 0.500 348 47.2 738 ERRALL BURIED . . . . . . . . 15.179 1.000 0.500 68 50.4 135 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 1 13 104 106 DISTCA CA (P) 0.00 0.00 0.00 0.94 12.26 106 DISTCA CA (RMS) 0.00 0.00 0.00 3.96 8.20 DISTCA ALL (N) 0 0 0 2 57 416 873 DISTALL ALL (P) 0.00 0.00 0.00 0.23 6.53 873 DISTALL ALL (RMS) 0.00 0.00 0.00 4.00 8.46 DISTALL END of the results output