####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 109 ( 436), selected 109 , name T0598TS328_1-D1 # Molecule2: number of CA atoms 127 ( 1026), selected 109 , name T0598-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0598TS328_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 109 21 - 146 4.01 4.01 LCS_AVERAGE: 85.83 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 36 45 - 80 1.91 5.31 LCS_AVERAGE: 19.59 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 51 - 75 1.00 5.70 LONGEST_CONTINUOUS_SEGMENT: 25 52 - 76 0.97 5.77 LCS_AVERAGE: 10.24 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 109 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT E 21 E 21 12 19 109 4 11 16 29 52 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT M 22 M 22 12 19 109 4 11 17 29 52 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT N 23 N 23 12 19 109 8 11 17 32 62 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT A 24 A 24 12 19 109 8 11 17 29 42 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT Y 25 Y 25 12 19 109 8 11 17 29 42 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT A 26 A 26 12 19 109 8 11 17 32 57 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT Y 27 Y 27 12 19 109 8 11 14 29 52 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT G 28 G 28 12 19 109 8 11 13 27 42 71 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT L 29 L 29 12 19 109 8 11 14 29 51 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT I 30 I 30 12 19 109 8 11 13 31 51 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT R 31 R 31 12 19 109 3 11 12 22 34 51 76 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT E 32 E 32 12 19 109 3 5 12 22 29 50 66 77 86 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT I 33 I 33 8 19 109 3 7 12 22 29 50 64 75 84 92 97 99 101 102 105 106 107 108 109 109 LCS_GDT V 34 V 34 8 19 109 4 7 8 15 18 43 66 77 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT L 35 L 35 8 19 109 4 7 10 15 17 50 66 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT P 36 P 36 8 19 109 4 7 9 13 25 32 47 66 78 88 95 99 101 102 105 106 107 108 109 109 LCS_GDT D 37 D 37 8 19 109 4 7 11 17 27 33 48 63 78 88 94 99 101 102 105 106 107 108 109 109 LCS_GDT M 38 M 38 8 19 109 3 7 8 25 35 51 69 84 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT L 39 L 39 8 19 109 4 7 8 15 17 21 46 69 85 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT G 40 G 40 4 11 109 3 3 4 5 10 17 32 44 53 56 64 91 91 98 102 106 106 107 109 109 LCS_GDT Q 41 Q 41 4 5 109 0 3 4 6 9 14 30 44 53 56 62 91 91 101 105 106 107 108 109 109 LCS_GDT D 42 D 42 4 5 109 2 9 12 22 33 51 71 84 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT Y 43 Y 43 3 6 109 3 4 12 22 38 61 79 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT S 44 S 44 4 6 109 3 4 5 7 12 18 22 40 72 92 97 99 101 102 105 106 107 108 109 109 LCS_GDT S 45 S 45 4 36 109 3 4 10 18 28 45 57 69 70 74 77 82 96 102 104 106 107 108 109 109 LCS_GDT M 46 M 46 4 36 109 3 4 4 12 48 61 67 71 74 82 87 92 96 101 104 105 107 108 109 109 LCS_GDT M 47 M 47 19 36 109 3 15 28 57 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT Y 48 Y 48 19 36 109 7 19 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT W 49 W 49 19 36 109 9 19 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT A 50 A 50 19 36 109 9 19 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT G 51 G 51 25 36 109 9 25 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT K 52 K 52 25 36 109 9 19 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT H 53 H 53 25 36 109 9 19 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT L 54 L 54 25 36 109 9 21 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT A 55 A 55 25 36 109 7 17 35 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT R 56 R 56 25 36 109 6 17 32 52 66 71 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT K 57 K 57 25 36 109 6 17 32 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT F 58 F 58 25 36 109 7 17 44 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT P 59 P 59 25 36 109 9 19 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT L 60 L 60 25 36 109 9 19 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT E 61 E 61 25 36 109 7 19 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT S 62 S 62 25 36 109 7 19 44 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT W 63 W 63 25 36 109 7 16 32 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT E 64 E 64 25 36 109 3 15 32 57 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT E 65 E 65 25 36 109 4 20 38 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT F 66 F 66 25 36 109 11 23 43 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT P 67 P 67 25 36 109 16 26 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT A 68 A 68 25 36 109 16 26 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT F 69 F 69 25 36 109 16 26 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT F 70 F 70 25 36 109 16 26 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT E 71 E 71 25 36 109 11 25 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT E 72 E 72 25 36 109 11 26 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT A 73 A 73 25 36 109 16 26 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT G 74 G 74 25 36 109 16 26 45 59 66 68 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT W 75 W 75 25 36 109 16 26 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT G 76 G 76 25 36 109 16 26 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT T 77 T 77 17 36 109 16 26 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT L 78 L 78 17 36 109 16 26 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT T 79 T 79 17 36 109 7 26 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT N 80 N 80 17 36 109 16 26 41 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT V 81 V 81 3 19 109 0 3 3 3 3 11 13 16 29 61 72 78 97 102 105 106 107 108 109 109 LCS_GDT S 82 S 82 3 3 109 0 3 3 3 3 5 10 11 32 64 72 78 94 102 105 106 107 108 109 109 LCS_GDT A 83 A 83 3 3 109 0 3 3 3 3 3 4 5 9 64 90 98 99 102 105 106 107 108 109 109 LCS_GDT E 89 E 89 6 6 109 4 16 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT F 90 F 90 6 6 109 5 22 43 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT E 91 E 91 6 6 109 12 26 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT L 92 L 92 6 6 109 16 26 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT E 93 E 93 6 6 109 16 26 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT G 94 G 94 6 6 109 2 16 43 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT P 95 P 95 3 6 109 0 3 4 14 16 28 39 59 83 90 97 99 101 102 105 106 107 108 109 109 LCS_GDT I 96 I 96 4 6 109 4 4 12 14 23 32 50 76 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT I 97 I 97 4 6 109 4 4 9 25 40 64 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT S 98 S 98 4 6 109 4 4 4 13 17 27 41 73 85 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT N 99 N 99 4 6 109 4 4 4 5 6 28 50 76 84 91 97 99 101 102 105 106 107 108 109 109 LCS_GDT R 100 R 100 4 21 109 5 17 43 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT L 101 L 101 4 21 109 8 19 32 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT K 102 K 102 4 21 109 3 4 11 31 55 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT H 103 H 103 4 21 109 3 5 17 24 40 64 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT Q 104 Q 104 3 21 109 3 3 22 34 47 66 76 84 88 91 97 99 101 102 105 106 107 108 109 109 LCS_GDT K 105 K 105 5 21 109 5 11 22 37 61 68 79 84 88 91 97 99 101 102 105 106 107 108 109 109 LCS_GDT E 106 E 106 5 21 109 5 13 29 57 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT P 107 P 107 5 28 109 3 8 14 37 63 68 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT C 108 C 108 14 28 109 7 17 45 59 66 71 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT F 109 F 109 14 28 109 9 26 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT Q 110 Q 110 14 28 109 9 24 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT L 111 L 111 14 28 109 9 19 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT E 112 E 112 14 28 109 9 26 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT A 113 A 113 14 28 109 9 26 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT G 114 G 114 14 28 109 11 26 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT F 115 F 115 14 28 109 9 26 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT I 116 I 116 14 28 109 9 19 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT A 117 A 117 14 28 109 11 24 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT E 118 E 118 14 28 109 8 17 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT Q 119 Q 119 14 28 109 7 17 32 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT I 120 I 120 14 28 109 7 26 42 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT Q 121 Q 121 14 28 109 5 10 22 31 51 66 73 84 88 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT L 122 L 122 6 28 109 5 5 8 20 38 51 78 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT M 123 M 123 6 28 109 5 6 28 45 65 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT N 124 N 124 6 28 109 7 22 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT D 125 D 125 3 28 109 3 3 3 5 45 63 68 77 85 90 95 99 101 102 104 105 107 108 109 109 LCS_GDT A 138 A 138 9 28 109 3 13 28 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT D 139 D 139 9 28 109 16 26 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT K 140 K 140 9 28 109 16 26 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT V 141 V 141 9 28 109 16 26 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT V 142 V 142 9 28 109 5 26 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT L 143 L 143 9 28 109 5 16 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT T 144 T 144 9 28 109 5 16 40 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT V 145 V 145 9 28 109 3 18 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_GDT K 146 K 146 9 28 109 4 17 43 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 LCS_AVERAGE LCS_A: 38.55 ( 10.24 19.59 85.83 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 16 26 45 59 66 74 80 85 89 93 97 99 101 102 105 106 107 108 109 109 GDT PERCENT_AT 12.60 20.47 35.43 46.46 51.97 58.27 62.99 66.93 70.08 73.23 76.38 77.95 79.53 80.31 82.68 83.46 84.25 85.04 85.83 85.83 GDT RMS_LOCAL 0.33 0.71 1.14 1.32 1.50 2.12 2.24 2.44 2.68 2.86 3.06 3.10 3.23 3.30 3.75 3.82 3.80 3.91 4.01 4.01 GDT RMS_ALL_AT 5.99 5.85 5.16 5.06 4.92 4.33 4.31 4.20 4.11 4.07 4.05 4.08 4.05 4.04 4.01 4.01 4.02 4.01 4.01 4.01 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA E 21 E 21 3.106 5 0.023 0.023 3.106 57.262 25.450 LGA M 22 M 22 2.943 4 0.277 0.277 4.926 47.143 23.571 LGA N 23 N 23 2.309 4 0.113 0.113 2.429 66.786 33.393 LGA A 24 A 24 3.178 1 0.112 0.112 3.441 51.786 41.429 LGA Y 25 Y 25 3.264 8 0.050 0.050 3.264 53.571 17.857 LGA A 26 A 26 2.300 1 0.036 0.036 2.617 62.857 50.286 LGA Y 27 Y 27 2.746 8 0.044 0.044 3.178 53.571 17.857 LGA G 28 G 28 3.581 0 0.029 0.029 3.581 46.667 46.667 LGA L 29 L 29 2.955 4 0.037 0.037 3.220 53.571 26.786 LGA I 30 I 30 3.087 4 0.033 0.033 4.371 46.905 23.452 LGA R 31 R 31 4.533 7 0.068 0.068 6.016 29.524 10.736 LGA E 32 E 32 6.226 5 0.227 0.227 8.281 14.524 6.455 LGA I 33 I 33 7.452 4 0.106 0.106 7.666 10.119 5.060 LGA V 34 V 34 6.518 3 0.033 0.033 6.564 17.381 9.932 LGA L 35 L 35 4.590 4 0.193 0.193 5.235 30.119 15.060 LGA P 36 P 36 7.868 3 0.063 0.063 8.951 7.024 4.014 LGA D 37 D 37 9.373 4 0.234 0.234 9.793 2.381 1.190 LGA M 38 M 38 6.139 4 0.057 0.057 6.830 18.333 9.167 LGA L 39 L 39 6.191 4 0.357 0.357 9.069 11.786 5.893 LGA G 40 G 40 11.914 0 0.462 0.462 14.033 0.000 0.000 LGA Q 41 Q 41 11.939 5 0.690 0.690 11.939 0.119 0.053 LGA D 42 D 42 6.340 4 0.622 0.622 8.409 15.119 7.560 LGA Y 43 Y 43 4.815 8 0.545 0.545 5.496 27.500 9.167 LGA S 44 S 44 7.749 2 0.108 0.108 7.749 13.810 9.206 LGA S 45 S 45 8.868 2 0.595 0.595 8.868 7.500 5.000 LGA M 46 M 46 6.906 4 0.195 0.195 6.906 16.548 8.274 LGA M 47 M 47 2.079 4 0.632 0.632 2.627 66.905 33.452 LGA Y 48 Y 48 1.278 8 0.114 0.114 1.395 81.429 27.143 LGA W 49 W 49 1.596 10 0.102 0.102 1.596 79.286 22.653 LGA A 50 A 50 1.334 1 0.059 0.059 1.466 81.429 65.143 LGA G 51 G 51 1.860 0 0.023 0.023 1.860 72.857 72.857 LGA K 52 K 52 1.962 5 0.017 0.017 1.962 72.857 32.381 LGA H 53 H 53 1.563 6 0.036 0.036 1.751 72.857 29.143 LGA L 54 L 54 1.811 4 0.032 0.032 2.125 68.810 34.405 LGA A 55 A 55 2.538 1 0.066 0.066 2.665 59.048 47.238 LGA R 56 R 56 2.583 7 0.054 0.054 2.841 57.143 20.779 LGA K 57 K 57 2.083 5 0.065 0.065 2.271 66.786 29.683 LGA F 58 F 58 2.053 7 0.449 0.449 2.166 68.929 25.065 LGA P 59 P 59 1.069 3 0.360 0.360 1.910 83.810 47.891 LGA L 60 L 60 1.204 4 0.061 0.061 1.359 81.429 40.714 LGA E 61 E 61 0.952 5 0.005 0.005 0.955 90.476 40.212 LGA S 62 S 62 0.794 2 0.067 0.067 0.913 90.476 60.317 LGA W 63 W 63 1.444 10 0.036 0.036 1.589 79.286 22.653 LGA E 64 E 64 1.650 5 0.087 0.087 1.680 75.000 33.333 LGA E 65 E 65 1.541 5 0.165 0.165 1.563 75.000 33.333 LGA F 66 F 66 1.609 7 0.021 0.021 1.780 77.143 28.052 LGA P 67 P 67 1.637 3 0.015 0.015 1.637 72.857 41.633 LGA A 68 A 68 1.560 1 0.007 0.007 1.667 77.143 61.714 LGA F 69 F 69 1.359 7 0.062 0.062 1.475 81.429 29.610 LGA F 70 F 70 1.701 7 0.027 0.027 2.219 70.833 25.758 LGA E 71 E 71 2.380 5 0.056 0.056 3.010 59.167 26.296 LGA E 72 E 72 2.076 5 0.073 0.073 2.528 62.857 27.937 LGA A 73 A 73 2.250 1 0.097 0.097 3.216 59.167 47.333 LGA G 74 G 74 3.346 0 0.066 0.066 3.446 51.786 51.786 LGA W 75 W 75 2.504 10 0.084 0.084 2.699 60.952 17.415 LGA G 76 G 76 2.611 0 0.021 0.021 2.611 60.952 60.952 LGA T 77 T 77 2.483 3 0.066 0.066 2.498 64.762 37.007 LGA L 78 L 78 1.633 4 0.064 0.064 1.814 72.857 36.429 LGA T 79 T 79 2.225 3 0.039 0.039 2.364 66.786 38.163 LGA N 80 N 80 2.750 4 0.082 0.082 4.661 49.167 24.583 LGA V 81 V 81 11.103 3 0.042 0.042 12.571 0.000 0.000 LGA S 82 S 82 10.932 2 0.527 0.527 11.048 0.000 0.000 LGA A 83 A 83 8.448 1 0.535 0.535 8.574 6.190 4.952 LGA E 89 E 89 1.951 5 0.054 0.054 2.434 68.810 30.582 LGA F 90 F 90 1.943 7 0.067 0.067 1.943 75.000 27.273 LGA E 91 E 91 1.546 5 0.025 0.025 1.691 75.000 33.333 LGA L 92 L 92 1.363 4 0.037 0.037 1.816 77.143 38.571 LGA E 93 E 93 2.969 5 0.128 0.128 2.969 62.857 27.937 LGA G 94 G 94 2.072 0 0.503 0.503 4.786 51.071 51.071 LGA P 95 P 95 6.484 3 0.310 0.310 7.649 18.214 10.408 LGA I 96 I 96 5.408 4 0.620 0.620 5.660 35.238 17.619 LGA I 97 I 97 3.918 4 0.041 0.041 4.108 43.452 21.726 LGA S 98 S 98 6.715 2 0.129 0.129 6.715 21.786 14.524 LGA N 99 N 99 5.955 4 0.766 0.766 5.955 27.738 13.869 LGA R 100 R 100 1.759 7 0.558 0.558 3.008 71.429 25.974 LGA L 101 L 101 2.211 4 0.169 0.169 2.354 68.810 34.405 LGA K 102 K 102 2.805 5 0.123 0.123 3.137 61.190 27.196 LGA H 103 H 103 3.807 6 0.668 0.668 4.611 47.381 18.952 LGA Q 104 Q 104 4.310 5 0.072 0.072 4.310 46.905 20.847 LGA K 105 K 105 3.995 5 0.395 0.395 4.460 45.119 20.053 LGA E 106 E 106 2.331 5 0.257 0.257 3.081 57.262 25.450 LGA P 107 P 107 3.536 3 0.041 0.041 3.536 64.167 36.667 LGA C 108 C 108 2.696 2 0.658 0.658 2.696 64.881 43.254 LGA F 109 F 109 2.191 7 0.090 0.090 2.526 62.857 22.857 LGA Q 110 Q 110 2.566 5 0.051 0.051 2.566 62.857 27.937 LGA L 111 L 111 2.167 4 0.030 0.030 2.271 64.762 32.381 LGA E 112 E 112 2.014 5 0.040 0.040 2.129 64.762 28.783 LGA A 113 A 113 1.969 1 0.028 0.028 2.017 70.833 56.667 LGA G 114 G 114 2.115 0 0.010 0.010 2.179 64.762 64.762 LGA F 115 F 115 2.238 7 0.031 0.031 2.266 64.762 23.550 LGA I 116 I 116 2.073 4 0.009 0.009 2.129 64.762 32.381 LGA A 117 A 117 2.148 1 0.023 0.023 2.328 64.762 51.810 LGA E 118 E 118 2.550 5 0.037 0.037 2.785 59.048 26.243 LGA Q 119 Q 119 2.567 5 0.151 0.151 2.567 60.952 27.090 LGA I 120 I 120 2.978 4 0.158 0.158 3.192 53.571 26.786 LGA Q 121 Q 121 4.612 5 0.035 0.035 4.612 40.357 17.937 LGA L 122 L 122 3.798 4 0.049 0.049 3.798 50.119 25.060 LGA M 123 M 123 2.365 4 0.088 0.088 2.365 68.810 34.405 LGA N 124 N 124 2.894 4 0.363 0.363 2.894 66.905 33.452 LGA D 125 D 125 4.949 4 0.710 0.710 7.762 22.262 11.131 LGA A 138 A 138 1.694 1 0.608 0.608 2.839 66.905 53.524 LGA D 139 D 139 2.914 4 0.234 0.234 2.914 60.952 30.476 LGA K 140 K 140 2.260 5 0.048 0.048 2.636 66.905 29.735 LGA V 141 V 141 1.092 3 0.079 0.079 1.317 85.952 49.116 LGA V 142 V 142 0.426 3 0.026 0.026 0.869 95.238 54.422 LGA L 143 L 143 1.395 4 0.018 0.018 1.824 77.143 38.571 LGA T 144 T 144 2.103 3 0.025 0.025 2.103 72.976 41.701 LGA V 145 V 145 1.123 3 0.062 0.062 2.610 71.071 40.612 LGA K 146 K 146 3.077 5 0.080 0.080 3.077 61.190 27.196 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 109 436 436 100.00 878 436 49.66 127 SUMMARY(RMSD_GDC): 4.006 3.932 3.932 46.683 24.723 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 109 127 4.0 85 2.44 54.331 48.934 3.346 LGA_LOCAL RMSD: 2.440 Number of atoms: 85 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 4.204 Number of assigned atoms: 109 Std_ASGN_ATOMS RMSD: 4.006 Standard rmsd on all 109 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.471895 * X + 0.632987 * Y + -0.613712 * Z + 2.967449 Y_new = 0.852230 * X + -0.505825 * Y + 0.133584 * Z + -10.063534 Z_new = -0.225874 * X + -0.586061 * Y + -0.778147 * Z + -0.926560 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.065103 0.227840 -2.496079 [DEG: 61.0259 13.0543 -143.0148 ] ZXZ: -1.785119 2.462507 -2.773726 [DEG: -102.2798 141.0912 -158.9228 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0598TS328_1-D1 REMARK 2: T0598-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0598TS328_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 109 127 4.0 85 2.44 48.934 4.01 REMARK ---------------------------------------------------------- MOLECULE T0598TS328_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0598 REMARK MODEL 1 REMARK PARENT 2osd_A ATOM 1 N GLU 21 -20.778 8.661 -21.508 1.00 3.00 N ATOM 2 CA GLU 21 -19.376 8.386 -21.270 1.00 3.00 C ATOM 3 C GLU 21 -19.226 7.417 -20.094 1.00 3.00 C ATOM 4 O GLU 21 -19.720 7.672 -19.016 1.00 3.00 O ATOM 5 N MET 22 -18.542 6.299 -20.293 1.00 3.00 N ATOM 6 CA MET 22 -18.443 5.285 -19.229 1.00 3.00 C ATOM 7 C MET 22 -17.056 5.255 -18.557 1.00 3.00 C ATOM 8 O MET 22 -16.021 5.184 -19.238 1.00 3.00 O ATOM 9 N ASN 23 -17.025 5.300 -17.218 1.00 3.00 N ATOM 10 CA ASN 23 -15.727 5.175 -16.586 1.00 3.00 C ATOM 11 C ASN 23 -14.905 3.989 -17.029 1.00 3.00 C ATOM 12 O ASN 23 -15.401 2.885 -17.137 1.00 3.00 O ATOM 13 N ALA 24 -13.629 4.229 -17.263 1.00 3.00 N ATOM 14 CA ALA 24 -12.714 3.196 -17.768 1.00 3.00 C ATOM 15 C ALA 24 -12.740 1.860 -16.959 1.00 3.00 C ATOM 16 O ALA 24 -12.775 0.744 -17.544 1.00 3.00 O ATOM 17 N TYR 25 -12.730 1.947 -15.622 1.00 3.00 N ATOM 18 CA TYR 25 -12.819 0.683 -14.860 1.00 3.00 C ATOM 19 C TYR 25 -13.901 -0.307 -15.366 1.00 3.00 C ATOM 20 O TYR 25 -13.611 -1.499 -15.497 1.00 3.00 O ATOM 21 N ALA 26 -15.113 0.188 -15.662 1.00 3.00 N ATOM 22 CA ALA 26 -16.207 -0.666 -16.167 1.00 3.00 C ATOM 23 C ALA 26 -15.917 -1.187 -17.552 1.00 3.00 C ATOM 24 O ALA 26 -16.302 -2.295 -17.923 1.00 3.00 O ATOM 25 N TYR 27 -15.241 -0.360 -18.319 1.00 3.00 N ATOM 26 CA TYR 27 -14.781 -0.754 -19.624 1.00 3.00 C ATOM 27 C TYR 27 -13.858 -1.942 -19.454 1.00 3.00 C ATOM 28 O TYR 27 -14.012 -2.926 -20.142 1.00 3.00 O ATOM 29 N GLY 28 -12.918 -1.857 -18.518 1.00 3.00 N ATOM 30 CA GLY 28 -11.945 -2.943 -18.268 1.00 3.00 C ATOM 31 C GLY 28 -12.532 -4.180 -17.597 1.00 3.00 C ATOM 32 O GLY 28 -12.054 -5.303 -17.802 1.00 3.00 O ATOM 33 N LEU 29 -13.576 -3.981 -16.796 1.00 3.00 N ATOM 34 CA LEU 29 -14.373 -5.113 -16.297 1.00 3.00 C ATOM 35 C LEU 29 -15.006 -5.915 -17.415 1.00 3.00 C ATOM 36 O LEU 29 -15.097 -7.138 -17.311 1.00 3.00 O ATOM 37 N ILE 30 -15.470 -5.256 -18.474 1.00 3.00 N ATOM 38 CA ILE 30 -16.092 -5.986 -19.583 1.00 3.00 C ATOM 39 C ILE 30 -15.114 -6.966 -20.174 1.00 3.00 C ATOM 40 O ILE 30 -15.454 -8.145 -20.381 1.00 3.00 O ATOM 41 N ARG 31 -13.895 -6.509 -20.427 1.00 3.00 N ATOM 42 CA ARG 31 -12.890 -7.375 -21.025 1.00 3.00 C ATOM 43 C ARG 31 -12.596 -8.510 -20.106 1.00 3.00 C ATOM 44 O ARG 31 -12.492 -9.646 -20.566 1.00 3.00 O ATOM 45 N GLU 32 -12.437 -8.222 -18.813 1.00 3.00 N ATOM 46 CA GLU 32 -12.105 -9.256 -17.841 1.00 3.00 C ATOM 47 C GLU 32 -13.164 -10.367 -17.804 1.00 3.00 C ATOM 48 O GLU 32 -12.820 -11.556 -17.722 1.00 3.00 O ATOM 49 N ILE 33 -14.440 -9.974 -17.853 1.00 3.00 N ATOM 50 CA ILE 33 -15.563 -10.917 -17.767 1.00 3.00 C ATOM 51 C ILE 33 -15.620 -11.816 -19.029 1.00 3.00 C ATOM 52 O ILE 33 -15.841 -13.015 -18.926 1.00 3.00 O ATOM 53 N VAL 34 -15.409 -11.236 -20.204 1.00 3.00 N ATOM 54 CA VAL 34 -15.381 -12.015 -21.443 1.00 3.00 C ATOM 55 C VAL 34 -14.248 -13.020 -21.438 1.00 3.00 C ATOM 56 O VAL 34 -14.473 -14.208 -21.624 1.00 3.00 O ATOM 57 N LEU 35 -13.032 -12.553 -21.192 1.00 3.00 N ATOM 58 CA LEU 35 -11.896 -13.453 -21.074 1.00 3.00 C ATOM 59 C LEU 35 -12.112 -14.609 -20.093 1.00 3.00 C ATOM 60 O LEU 35 -11.378 -15.584 -20.123 1.00 3.00 O ATOM 61 N PRO 36 -13.105 -14.497 -19.222 1.00 3.00 N ATOM 62 CA PRO 36 -13.458 -15.573 -18.293 1.00 3.00 C ATOM 63 C PRO 36 -14.419 -16.580 -18.937 1.00 3.00 C ATOM 64 O PRO 36 -14.549 -17.722 -18.472 1.00 3.00 O ATOM 65 N ASP 37 -15.099 -16.123 -19.991 1.00 3.00 N ATOM 66 CA ASP 37 -15.906 -16.963 -20.864 1.00 3.00 C ATOM 67 C ASP 37 -15.263 -17.146 -22.276 1.00 3.00 C ATOM 68 O ASP 37 -15.844 -17.789 -23.130 1.00 3.00 O ATOM 69 N MET 38 -14.076 -16.578 -22.520 1.00 3.00 N ATOM 70 CA MET 38 -13.210 -17.010 -23.636 1.00 3.00 C ATOM 71 C MET 38 -12.411 -18.220 -23.143 1.00 3.00 C ATOM 72 O MET 38 -11.989 -19.031 -23.947 1.00 3.00 O ATOM 73 N LEU 39 -12.217 -18.356 -21.830 1.00 3.00 N ATOM 74 CA LEU 39 -11.488 -19.510 -21.255 1.00 3.00 C ATOM 75 C LEU 39 -12.267 -20.162 -20.120 1.00 3.00 C ATOM 76 O LEU 39 -13.056 -21.072 -20.355 1.00 3.00 O ATOM 77 N GLY 40 -14.094 -21.537 -23.979 1.00 3.00 N ATOM 78 CA GLY 40 -12.792 -22.187 -23.840 1.00 3.00 C ATOM 79 C GLY 40 -11.925 -22.053 -25.084 1.00 3.00 C ATOM 80 O GLY 40 -11.910 -22.949 -25.935 1.00 3.00 O ATOM 81 N GLN 41 -11.188 -20.941 -25.171 1.00 3.00 N ATOM 82 CA GLN 41 -10.363 -20.583 -26.347 1.00 3.00 C ATOM 83 C GLN 41 -9.417 -19.399 -25.999 1.00 3.00 C ATOM 84 O GLN 41 -9.565 -18.790 -24.926 1.00 3.00 O ATOM 85 N ASP 42 -8.531 -19.048 -26.942 1.00 3.00 N ATOM 86 CA ASP 42 -7.363 -18.195 -26.674 1.00 3.00 C ATOM 87 C ASP 42 -7.592 -16.892 -25.961 1.00 3.00 C ATOM 88 O ASP 42 -8.489 -16.753 -25.142 1.00 3.00 O ATOM 89 N TYR 43 -6.641 -16.005 -26.112 1.00 3.00 N ATOM 90 CA TYR 43 -6.725 -14.650 -25.494 1.00 3.00 C ATOM 91 C TYR 43 -7.188 -13.429 -26.379 1.00 3.00 C ATOM 92 O TYR 43 -6.808 -13.210 -27.521 1.00 3.00 O ATOM 93 N SER 44 -8.020 -12.565 -25.838 1.00 3.00 N ATOM 94 CA SER 44 -8.469 -11.380 -26.605 1.00 3.00 C ATOM 95 C SER 44 -8.245 -10.113 -25.798 1.00 3.00 C ATOM 96 O SER 44 -7.365 -9.305 -26.120 1.00 3.00 O ATOM 97 N SER 45 -8.935 -9.954 -24.677 1.00 9.00 N ATOM 98 CA SER 45 -8.746 -8.761 -23.852 1.00 9.00 C ATOM 99 C SER 45 -7.319 -8.578 -23.377 1.00 9.00 C ATOM 100 O SER 45 -6.554 -9.538 -23.204 1.00 9.00 O ATOM 101 N MET 46 -6.931 -7.340 -23.141 1.00 9.00 N ATOM 102 CA MET 46 -5.569 -6.951 -22.678 1.00 9.00 C ATOM 103 C MET 46 -4.445 -7.409 -23.627 1.00 9.00 C ATOM 104 O MET 46 -3.257 -7.212 -23.445 1.00 9.00 O ATOM 105 N MET 47 -4.780 -7.977 -24.768 1.00 3.00 N ATOM 106 CA MET 47 -3.788 -8.419 -25.750 1.00 3.00 C ATOM 107 C MET 47 -3.719 -7.446 -26.889 1.00 3.00 C ATOM 108 O MET 47 -4.771 -6.987 -27.378 1.00 3.00 O ATOM 109 N TYR 48 -2.531 -7.132 -27.455 1.00 3.00 N ATOM 110 CA TYR 48 -2.450 -6.370 -28.746 1.00 3.00 C ATOM 111 C TYR 48 -3.385 -6.862 -29.834 1.00 3.00 C ATOM 112 O TYR 48 -3.940 -6.079 -30.603 1.00 3.00 O ATOM 113 N TRP 49 -3.648 -8.157 -29.878 1.00 3.00 N ATOM 114 CA TRP 49 -4.534 -8.797 -30.874 1.00 3.00 C ATOM 115 C TRP 49 -5.933 -8.183 -31.016 1.00 3.00 C ATOM 116 O TRP 49 -6.363 -7.862 -32.126 1.00 3.00 O ATOM 117 N ALA 50 -6.624 -7.974 -29.897 1.00 3.00 N ATOM 118 CA ALA 50 -7.938 -7.334 -29.909 1.00 3.00 C ATOM 119 C ALA 50 -7.810 -5.848 -30.230 1.00 3.00 C ATOM 120 O ALA 50 -8.539 -5.316 -31.063 1.00 3.00 O ATOM 121 N GLY 51 -6.882 -5.176 -29.563 1.00 3.00 N ATOM 122 CA GLY 51 -6.472 -3.849 -29.985 1.00 3.00 C ATOM 123 C GLY 51 -6.113 -3.745 -31.476 1.00 3.00 C ATOM 124 O GLY 51 -6.493 -2.780 -32.126 1.00 3.00 O ATOM 125 N LYS 52 -5.397 -4.722 -32.026 1.00 3.00 N ATOM 126 CA LYS 52 -5.031 -4.664 -33.466 1.00 3.00 C ATOM 127 C LYS 52 -6.280 -4.606 -34.325 1.00 3.00 C ATOM 128 O LYS 52 -6.317 -3.864 -35.290 1.00 3.00 O ATOM 129 N HIS 53 -7.293 -5.396 -33.945 1.00 3.00 N ATOM 130 CA HIS 53 -8.576 -5.486 -34.666 1.00 3.00 C ATOM 131 C HIS 53 -9.442 -4.264 -34.436 1.00 3.00 C ATOM 132 O HIS 53 -10.176 -3.847 -35.303 1.00 3.00 O ATOM 133 N LEU 54 -9.382 -3.737 -33.234 1.00 3.00 N ATOM 134 CA LEU 54 -10.081 -2.509 -32.839 1.00 3.00 C ATOM 135 C LEU 54 -9.528 -1.325 -33.648 1.00 3.00 C ATOM 136 O LEU 54 -10.300 -0.528 -34.171 1.00 3.00 O ATOM 137 N ALA 55 -8.197 -1.227 -33.786 1.00 3.00 N ATOM 138 CA ALA 55 -7.606 -0.130 -34.543 1.00 3.00 C ATOM 139 C ALA 55 -7.870 -0.261 -36.032 1.00 3.00 C ATOM 140 O ALA 55 -7.927 0.727 -36.770 1.00 3.00 O ATOM 141 N ARG 56 -8.003 -1.491 -36.500 1.00 3.00 N ATOM 142 CA ARG 56 -8.375 -1.704 -37.884 1.00 3.00 C ATOM 143 C ARG 56 -9.739 -1.094 -38.114 1.00 3.00 C ATOM 144 O ARG 56 -10.025 -0.519 -39.167 1.00 3.00 O ATOM 145 N LYS 57 -10.591 -1.252 -37.113 1.00 3.00 N ATOM 146 CA LYS 57 -11.972 -0.899 -37.233 1.00 3.00 C ATOM 147 C LYS 57 -12.152 0.586 -37.079 1.00 3.00 C ATOM 148 O LYS 57 -12.997 1.157 -37.742 1.00 3.00 O ATOM 149 N PHE 58 -11.338 1.222 -36.241 1.00 3.00 N ATOM 150 CA PHE 58 -11.320 2.684 -36.164 1.00 3.00 C ATOM 151 C PHE 58 -10.869 3.313 -37.495 1.00 3.00 C ATOM 152 O PHE 58 -11.324 4.392 -37.841 1.00 3.00 O ATOM 153 N PRO 59 -9.969 2.635 -38.202 1.00 3.00 N ATOM 154 CA PRO 59 -9.460 3.009 -39.547 1.00 3.00 C ATOM 155 C PRO 59 -9.301 4.503 -39.739 1.00 3.00 C ATOM 156 O PRO 59 -10.010 5.100 -40.540 1.00 3.00 O ATOM 157 N LEU 60 -8.339 5.111 -39.034 1.00 3.00 N ATOM 158 CA LEU 60 -8.098 6.535 -39.239 1.00 3.00 C ATOM 159 C LEU 60 -7.442 6.798 -40.603 1.00 3.00 C ATOM 160 O LEU 60 -6.797 5.913 -41.148 1.00 3.00 O ATOM 161 N GLU 61 -7.646 8.003 -41.140 1.00 3.00 N ATOM 162 CA GLU 61 -7.206 8.384 -42.486 1.00 3.00 C ATOM 163 C GLU 61 -5.733 8.825 -42.522 1.00 3.00 C ATOM 164 O GLU 61 -5.045 8.641 -43.513 1.00 3.00 O ATOM 165 N SER 62 -5.288 9.487 -41.456 1.00 3.00 N ATOM 166 CA SER 62 -3.932 9.998 -41.359 1.00 3.00 C ATOM 167 C SER 62 -3.530 10.045 -39.885 1.00 3.00 C ATOM 168 O SER 62 -4.329 9.731 -39.020 1.00 3.00 O ATOM 169 N TRP 63 -2.292 10.408 -39.593 1.00 3.00 N ATOM 170 CA TRP 63 -1.835 10.442 -38.212 1.00 3.00 C ATOM 171 C TRP 63 -2.633 11.467 -37.408 1.00 3.00 C ATOM 172 O TRP 63 -2.977 11.208 -36.261 1.00 3.00 O ATOM 173 N GLU 64 -2.975 12.599 -38.009 1.00 3.00 N ATOM 174 CA GLU 64 -3.774 13.607 -37.307 1.00 3.00 C ATOM 175 C GLU 64 -5.151 13.078 -36.855 1.00 3.00 C ATOM 176 O GLU 64 -5.647 13.422 -35.784 1.00 3.00 O ATOM 177 N GLU 65 -5.759 12.234 -37.669 1.00 3.00 N ATOM 178 CA GLU 65 -7.030 11.645 -37.312 1.00 3.00 C ATOM 179 C GLU 65 -6.836 10.594 -36.218 1.00 3.00 C ATOM 180 O GLU 65 -7.680 10.521 -35.302 1.00 3.00 O ATOM 181 N PHE 66 -5.753 9.799 -36.309 1.00 3.00 N ATOM 182 CA PHE 66 -5.328 8.929 -35.182 1.00 3.00 C ATOM 183 C PHE 66 -5.194 9.745 -33.858 1.00 3.00 C ATOM 184 O PHE 66 -5.721 9.350 -32.821 1.00 3.00 O ATOM 185 N PRO 67 -4.568 10.909 -33.886 1.00 3.00 N ATOM 186 CA PRO 67 -4.506 11.722 -32.649 1.00 3.00 C ATOM 187 C PRO 67 -5.895 12.127 -32.154 1.00 3.00 C ATOM 188 O PRO 67 -6.205 11.963 -30.964 1.00 3.00 O ATOM 189 N ALA 68 -6.747 12.617 -33.065 1.00 3.00 N ATOM 190 CA ALA 68 -8.131 13.044 -32.739 1.00 3.00 C ATOM 191 C ALA 68 -8.975 11.889 -32.213 1.00 3.00 C ATOM 192 O ALA 68 -9.744 12.060 -31.259 1.00 3.00 O ATOM 193 N PHE 69 -8.856 10.711 -32.830 1.00 3.00 N ATOM 194 CA PHE 69 -9.597 9.540 -32.320 1.00 3.00 C ATOM 195 C PHE 69 -9.191 9.190 -30.889 1.00 3.00 C ATOM 196 O PHE 69 -10.030 8.779 -30.103 1.00 3.00 O ATOM 197 N PHE 70 -7.911 9.349 -30.538 1.00 3.00 N ATOM 198 CA PHE 70 -7.476 9.043 -29.168 1.00 3.00 C ATOM 199 C PHE 70 -8.036 10.062 -28.177 1.00 3.00 C ATOM 200 O PHE 70 -8.441 9.708 -27.066 1.00 3.00 O ATOM 201 N GLU 71 -8.078 11.322 -28.586 1.00 3.00 N ATOM 202 CA GLU 71 -8.729 12.361 -27.790 1.00 3.00 C ATOM 203 C GLU 71 -10.245 12.126 -27.689 1.00 3.00 C ATOM 204 O GLU 71 -10.823 12.346 -26.634 1.00 3.00 O ATOM 205 N GLU 72 -10.885 11.667 -28.766 1.00 3.00 N ATOM 206 CA GLU 72 -12.321 11.350 -28.714 1.00 3.00 C ATOM 207 C GLU 72 -12.584 10.249 -27.707 1.00 3.00 C ATOM 208 O GLU 72 -13.497 10.340 -26.878 1.00 3.00 O ATOM 209 N ALA 73 -11.773 9.206 -27.803 1.00 3.00 N ATOM 210 CA ALA 73 -11.893 7.996 -26.953 1.00 3.00 C ATOM 211 C ALA 73 -11.508 8.264 -25.537 1.00 3.00 C ATOM 212 O ALA 73 -11.871 7.514 -24.640 1.00 3.00 O ATOM 213 N GLY 74 -10.688 9.295 -25.375 1.00 3.00 N ATOM 214 CA GLY 74 -10.204 9.751 -24.078 1.00 3.00 C ATOM 215 C GLY 74 -9.058 8.897 -23.525 1.00 3.00 C ATOM 216 O GLY 74 -8.895 8.712 -22.304 1.00 3.00 O ATOM 217 N TRP 75 -8.234 8.461 -24.464 1.00 3.00 N ATOM 218 CA TRP 75 -7.097 7.613 -24.232 1.00 3.00 C ATOM 219 C TRP 75 -5.812 8.422 -24.173 1.00 3.00 C ATOM 220 O TRP 75 -4.713 7.850 -24.072 1.00 3.00 O ATOM 221 N GLY 76 -5.953 9.743 -24.283 1.00 3.00 N ATOM 222 CA GLY 76 -4.867 10.680 -24.041 1.00 3.00 C ATOM 223 C GLY 76 -4.296 11.352 -25.275 1.00 3.00 C ATOM 224 O GLY 76 -4.802 11.189 -26.402 1.00 3.00 O ATOM 225 N THR 77 -3.209 12.086 -25.044 1.00 3.00 N ATOM 226 CA THR 77 -2.506 12.833 -26.084 1.00 3.00 C ATOM 227 C THR 77 -1.327 12.064 -26.669 1.00 3.00 C ATOM 228 O THR 77 -0.278 11.962 -26.039 1.00 3.00 O ATOM 229 N LEU 78 -1.506 11.540 -27.881 1.00 3.00 N ATOM 230 CA LEU 78 -0.442 10.818 -28.604 1.00 3.00 C ATOM 231 C LEU 78 0.526 11.776 -29.265 1.00 3.00 C ATOM 232 O LEU 78 0.098 12.680 -29.962 1.00 3.00 O ATOM 233 N THR 79 1.820 11.573 -29.045 1.00 3.00 N ATOM 234 CA THR 79 2.839 12.334 -29.740 1.00 3.00 C ATOM 235 C THR 79 3.428 11.441 -30.826 1.00 3.00 C ATOM 236 O THR 79 3.860 10.314 -30.558 1.00 3.00 O ATOM 237 N ASN 80 3.398 11.936 -32.062 1.00 3.00 N ATOM 238 CA ASN 80 3.895 11.185 -33.213 1.00 3.00 C ATOM 239 C ASN 80 4.516 12.175 -34.164 1.00 3.00 C ATOM 240 O ASN 80 3.858 13.123 -34.545 1.00 3.00 O ATOM 241 N VAL 81 8.098 10.124 -39.840 1.00 3.00 N ATOM 242 CA VAL 81 7.367 8.960 -40.352 1.00 3.00 C ATOM 243 C VAL 81 7.342 8.941 -41.883 1.00 3.00 C ATOM 244 O VAL 81 7.602 7.906 -42.499 1.00 3.00 O ATOM 245 N SER 82 7.049 10.088 -42.493 1.00 3.00 N ATOM 246 CA SER 82 7.124 10.211 -43.937 1.00 3.00 C ATOM 247 C SER 82 8.534 9.801 -44.400 1.00 3.00 C ATOM 248 O SER 82 8.692 8.793 -45.094 1.00 3.00 O ATOM 249 N ALA 83 9.552 10.547 -43.963 1.00 3.00 N ATOM 250 CA ALA 83 10.943 10.317 -44.389 1.00 3.00 C ATOM 251 C ALA 83 11.591 9.032 -43.815 1.00 3.00 C ATOM 252 O ALA 83 11.688 8.018 -44.510 1.00 3.00 O ATOM 273 N GLU 89 8.954 6.012 -32.667 1.00 3.00 N ATOM 274 CA GLU 89 8.621 6.082 -31.246 1.00 3.00 C ATOM 275 C GLU 89 7.360 6.916 -31.139 1.00 3.00 C ATOM 276 O GLU 89 7.268 7.973 -31.774 1.00 3.00 O ATOM 277 N PHE 90 6.384 6.414 -30.383 1.00 3.00 N ATOM 278 CA PHE 90 5.160 7.112 -30.138 1.00 3.00 C ATOM 279 C PHE 90 4.978 7.251 -28.613 1.00 3.00 C ATOM 280 O PHE 90 5.083 6.274 -27.859 1.00 3.00 O ATOM 281 N GLU 91 4.688 8.463 -28.158 1.00 3.00 N ATOM 282 CA GLU 91 4.461 8.693 -26.751 1.00 3.00 C ATOM 283 C GLU 91 2.976 8.904 -26.514 1.00 3.00 C ATOM 284 O GLU 91 2.260 9.290 -27.431 1.00 3.00 O ATOM 285 N LEU 92 2.511 8.572 -25.309 1.00 3.00 N ATOM 286 CA LEU 92 1.128 8.759 -24.951 1.00 3.00 C ATOM 287 C LEU 92 1.106 9.406 -23.582 1.00 3.00 C ATOM 288 O LEU 92 1.609 8.832 -22.615 1.00 3.00 O ATOM 289 N GLU 93 0.580 10.624 -23.518 1.00 3.00 N ATOM 290 CA GLU 93 0.436 11.358 -22.268 1.00 3.00 C ATOM 291 C GLU 93 -0.989 11.187 -21.815 1.00 3.00 C ATOM 292 O GLU 93 -1.885 11.115 -22.646 1.00 3.00 O ATOM 293 N GLY 94 -1.182 11.165 -20.495 1.00 3.00 N ATOM 294 CA GLY 94 -2.486 11.154 -19.896 1.00 3.00 C ATOM 295 C GLY 94 -3.303 9.968 -20.395 1.00 3.00 C ATOM 296 O GLY 94 -4.416 10.136 -20.858 1.00 3.00 O ATOM 297 N PRO 95 -2.740 8.747 -20.314 1.00 3.00 N ATOM 298 CA PRO 95 -3.440 7.578 -20.824 1.00 3.00 C ATOM 299 C PRO 95 -4.344 6.323 -20.868 1.00 3.00 C ATOM 300 O PRO 95 -5.516 6.382 -21.272 1.00 3.00 O ATOM 301 N ILE 96 -3.780 5.168 -20.485 1.00 3.00 N ATOM 302 CA ILE 96 -4.540 3.905 -20.400 1.00 3.00 C ATOM 303 C ILE 96 -4.339 3.425 -18.979 1.00 3.00 C ATOM 304 O ILE 96 -3.413 3.860 -18.310 1.00 3.00 O ATOM 305 N ILE 97 -5.182 2.487 -18.510 1.00 3.00 N ATOM 306 CA ILE 97 -5.033 2.023 -17.133 1.00 3.00 C ATOM 307 C ILE 97 -3.600 1.729 -16.703 1.00 3.00 C ATOM 308 O ILE 97 -3.187 2.082 -15.586 1.00 3.00 O ATOM 309 N SER 98 -2.840 1.102 -17.582 1.00 9.00 N ATOM 310 CA SER 98 -1.485 0.762 -17.200 1.00 9.00 C ATOM 311 C SER 98 -0.568 1.947 -16.853 1.00 9.00 C ATOM 312 O SER 98 0.498 1.752 -16.287 1.00 9.00 O ATOM 313 N ASN 99 -0.959 3.167 -17.169 1.00 3.00 N ATOM 314 CA ASN 99 -0.973 5.291 -17.352 1.00 3.00 C ATOM 315 C ASN 99 -1.564 4.378 -16.287 1.00 3.00 C ATOM 316 O ASN 99 -2.786 4.389 -16.071 1.00 3.00 O ATOM 317 N ARG 100 -0.747 3.590 -15.622 1.00 3.00 N ATOM 318 CA ARG 100 -1.204 2.760 -14.515 1.00 3.00 C ATOM 319 C ARG 100 -0.047 2.500 -13.564 1.00 3.00 C ATOM 320 O ARG 100 0.587 1.412 -13.634 1.00 3.00 O ATOM 321 N LEU 101 0.269 3.450 -12.679 1.00 3.00 N ATOM 322 CA LEU 101 1.420 3.255 -11.796 1.00 3.00 C ATOM 323 C LEU 101 1.184 2.257 -10.693 1.00 3.00 C ATOM 324 O LEU 101 2.070 2.027 -9.888 1.00 3.00 O ATOM 325 N LYS 102 -0.021 1.635 -10.627 1.00 9.00 N ATOM 326 CA LYS 102 -0.227 0.560 -9.696 1.00 9.00 C ATOM 327 C LYS 102 0.368 -0.756 -10.194 1.00 9.00 C ATOM 328 O LYS 102 0.528 -1.674 -9.403 1.00 9.00 O ATOM 329 N HIS 103 0.723 -0.854 -11.483 1.00 3.00 N ATOM 330 CA HIS 103 1.359 -2.076 -11.954 1.00 3.00 C ATOM 331 C HIS 103 2.638 -2.327 -11.153 1.00 3.00 C ATOM 332 O HIS 103 3.450 -1.418 -10.974 1.00 3.00 O ATOM 333 N GLN 104 2.844 -3.561 -10.747 1.00 3.00 N ATOM 334 CA GLN 104 4.160 -3.957 -10.262 1.00 3.00 C ATOM 335 C GLN 104 5.131 -3.946 -11.470 1.00 3.00 C ATOM 336 O GLN 104 4.732 -3.937 -12.615 1.00 3.00 O ATOM 337 N LYS 105 6.440 -4.009 -11.143 1.00 3.00 N ATOM 338 CA LYS 105 7.394 -4.173 -12.217 1.00 3.00 C ATOM 339 C LYS 105 6.614 -3.207 -14.258 1.00 3.00 C ATOM 340 O LYS 105 7.431 -2.478 -14.844 1.00 3.00 O ATOM 341 N GLU 106 5.759 -4.009 -14.907 1.00 3.00 N ATOM 342 CA GLU 106 5.764 -4.055 -16.368 1.00 3.00 C ATOM 343 C GLU 106 4.629 -3.197 -16.953 1.00 3.00 C ATOM 344 O GLU 106 3.606 -2.988 -16.304 1.00 3.00 O ATOM 345 N PRO 107 4.832 -2.651 -18.170 1.00 3.00 N ATOM 346 CA PRO 107 3.830 -1.840 -18.833 1.00 3.00 C ATOM 347 C PRO 107 2.491 -2.554 -18.957 1.00 3.00 C ATOM 348 O PRO 107 2.467 -3.767 -19.137 1.00 3.00 O ATOM 349 N CYS 108 1.399 -1.793 -18.864 1.00 3.00 N ATOM 350 CA CYS 108 0.060 -2.339 -18.820 1.00 3.00 C ATOM 351 C CYS 108 -0.759 -2.063 -20.066 1.00 3.00 C ATOM 352 O CYS 108 -1.802 -2.669 -20.231 1.00 3.00 O ATOM 353 N PHE 109 -0.316 -1.176 -20.956 1.00 3.00 N ATOM 354 CA PHE 109 -1.157 -0.798 -22.127 1.00 3.00 C ATOM 355 C PHE 109 -1.048 -1.663 -23.384 1.00 3.00 C ATOM 356 O PHE 109 -0.805 -1.178 -24.476 1.00 3.00 O ATOM 357 N GLN 110 -1.257 -2.959 -23.219 1.00 3.00 N ATOM 358 CA GLN 110 -1.182 -3.883 -24.330 1.00 3.00 C ATOM 359 C GLN 110 -2.257 -3.634 -25.366 1.00 3.00 C ATOM 360 O GLN 110 -2.014 -3.714 -26.567 1.00 3.00 O ATOM 361 N LEU 111 -3.455 -3.357 -24.889 1.00 3.00 N ATOM 362 CA LEU 111 -4.573 -3.135 -25.765 1.00 3.00 C ATOM 363 C LEU 111 -4.331 -1.915 -26.637 1.00 3.00 C ATOM 364 O LEU 111 -4.435 -2.012 -27.845 1.00 3.00 O ATOM 365 N GLU 112 -4.001 -0.772 -26.024 1.00 3.00 N ATOM 366 CA GLU 112 -3.564 0.426 -26.762 1.00 3.00 C ATOM 367 C GLU 112 -2.401 0.169 -27.764 1.00 3.00 C ATOM 368 O GLU 112 -2.392 0.737 -28.850 1.00 3.00 O ATOM 369 N ALA 113 -1.414 -0.647 -27.425 1.00 3.00 N ATOM 370 CA ALA 113 -0.297 -0.970 -28.373 1.00 3.00 C ATOM 371 C ALA 113 -0.835 -1.589 -29.651 1.00 3.00 C ATOM 372 O ALA 113 -0.375 -1.273 -30.736 1.00 3.00 O ATOM 373 N GLY 114 -1.800 -2.489 -29.513 1.00 3.00 N ATOM 374 CA GLY 114 -2.468 -3.124 -30.656 1.00 3.00 C ATOM 375 C GLY 114 -3.268 -2.145 -31.492 1.00 3.00 C ATOM 376 O GLY 114 -3.255 -2.214 -32.732 1.00 3.00 O ATOM 377 N PHE 115 -3.979 -1.242 -30.806 1.00 3.00 N ATOM 378 CA PHE 115 -4.744 -0.203 -31.458 1.00 3.00 C ATOM 379 C PHE 115 -3.827 0.590 -32.325 1.00 3.00 C ATOM 380 O PHE 115 -4.115 0.786 -33.485 1.00 3.00 O ATOM 381 N ILE 116 -2.701 1.026 -31.782 1.00 3.00 N ATOM 382 CA ILE 116 -1.714 1.753 -32.579 1.00 3.00 C ATOM 383 C ILE 116 -1.259 0.901 -33.774 1.00 3.00 C ATOM 384 O ILE 116 -1.224 1.383 -34.906 1.00 3.00 O ATOM 385 N ALA 117 -0.954 -0.370 -33.550 1.00 3.00 N ATOM 386 CA ALA 117 -0.541 -1.259 -34.654 1.00 3.00 C ATOM 387 C ALA 117 -1.583 -1.309 -35.805 1.00 3.00 C ATOM 388 O ALA 117 -1.243 -1.154 -36.959 1.00 3.00 O ATOM 389 N GLU 118 -2.852 -1.533 -35.483 1.00 3.00 N ATOM 390 CA GLU 118 -3.907 -1.636 -36.488 1.00 3.00 C ATOM 391 C GLU 118 -4.296 -0.326 -37.159 1.00 3.00 C ATOM 392 O GLU 118 -4.598 -0.323 -38.353 1.00 3.00 O ATOM 393 N GLN 119 -4.307 0.784 -36.415 1.00 3.00 N ATOM 394 CA GLN 119 -4.514 2.103 -37.023 1.00 3.00 C ATOM 395 C GLN 119 -3.711 1.762 -38.276 1.00 3.00 C ATOM 396 O GLN 119 -3.921 2.348 -39.335 1.00 3.00 O ATOM 397 N ILE 120 -2.800 0.817 -38.129 1.00 3.00 N ATOM 398 CA ILE 120 -1.916 0.378 -39.201 1.00 3.00 C ATOM 399 C ILE 120 -2.596 0.110 -40.556 1.00 3.00 C ATOM 400 O ILE 120 -1.915 -0.026 -41.567 1.00 3.00 O ATOM 401 N GLN 121 -3.921 0.036 -40.570 1.00 3.00 N ATOM 402 CA GLN 121 -4.643 -0.231 -41.812 1.00 3.00 C ATOM 403 C GLN 121 -4.583 0.947 -42.790 1.00 3.00 C ATOM 404 O GLN 121 -4.631 0.745 -44.007 1.00 3.00 O ATOM 405 N LEU 122 -4.475 2.157 -42.270 1.00 3.00 N ATOM 406 CA LEU 122 -4.420 3.339 -43.119 1.00 3.00 C ATOM 407 C LEU 122 -3.117 3.542 -43.873 1.00 3.00 C ATOM 408 O LEU 122 -3.116 4.081 -44.977 1.00 3.00 O ATOM 409 N MET 123 -1.994 3.128 -43.286 1.00 3.00 N ATOM 410 CA MET 123 -0.718 3.279 -43.966 1.00 3.00 C ATOM 411 C MET 123 -0.628 2.211 -45.048 1.00 3.00 C ATOM 412 O MET 123 -0.128 2.460 -46.144 1.00 3.00 O ATOM 413 N ASN 124 -1.141 1.025 -44.737 1.00 3.00 N ATOM 414 CA ASN 124 -1.128 -0.079 -45.683 1.00 3.00 C ATOM 415 C ASN 124 0.088 -1.036 -45.721 1.00 3.00 C ATOM 416 O ASN 124 0.424 -1.576 -46.760 1.00 3.00 O ATOM 417 N ASP 125 0.754 -1.190 -44.583 1.00 3.00 N ATOM 418 CA ASP 125 1.588 -2.359 -44.326 1.00 3.00 C ATOM 419 C ASP 125 1.656 -2.557 -42.833 1.00 3.00 C ATOM 420 O ASP 125 1.330 -1.654 -42.068 1.00 3.00 O ATOM 469 N ALA 138 6.498 6.670 -14.731 1.00 3.00 N ATOM 470 CA ALA 138 6.983 7.514 -15.824 1.00 3.00 C ATOM 471 C ALA 138 5.916 8.557 -16.150 1.00 3.00 C ATOM 472 O ALA 138 4.759 8.372 -15.857 1.00 3.00 O ATOM 473 N ASP 139 6.327 9.646 -16.766 1.00 3.00 N ATOM 474 CA ASP 139 5.421 10.714 -17.172 1.00 3.00 C ATOM 475 C ASP 139 4.598 10.345 -18.407 1.00 3.00 C ATOM 476 O ASP 139 3.470 10.806 -18.565 1.00 3.00 O ATOM 477 N LYS 140 5.167 9.542 -19.306 1.00 3.00 N ATOM 478 CA LYS 140 4.442 9.116 -20.495 1.00 3.00 C ATOM 479 C LYS 140 4.664 7.644 -20.788 1.00 3.00 C ATOM 480 O LYS 140 5.666 7.063 -20.390 1.00 3.00 O ATOM 481 N VAL 141 3.703 7.051 -21.487 1.00 3.00 N ATOM 482 CA VAL 141 3.893 5.753 -22.080 1.00 3.00 C ATOM 483 C VAL 141 4.693 5.915 -23.374 1.00 3.00 C ATOM 484 O VAL 141 4.437 6.824 -24.159 1.00 3.00 O ATOM 485 N VAL 142 5.681 5.045 -23.575 1.00 3.00 N ATOM 486 CA VAL 142 6.506 5.087 -24.771 1.00 3.00 C ATOM 487 C VAL 142 6.406 3.733 -25.482 1.00 3.00 C ATOM 488 O VAL 142 6.579 2.679 -24.865 1.00 3.00 O ATOM 489 N LEU 143 6.091 3.796 -26.777 1.00 3.00 N ATOM 490 CA LEU 143 5.809 2.627 -27.599 1.00 3.00 C ATOM 491 C LEU 143 6.767 2.622 -28.745 1.00 3.00 C ATOM 492 O LEU 143 6.797 3.603 -29.466 1.00 3.00 O ATOM 493 N THR 144 7.530 1.545 -28.938 1.00 3.00 N ATOM 494 CA THR 144 8.408 1.428 -30.110 1.00 3.00 C ATOM 495 C THR 144 7.661 0.687 -31.237 1.00 3.00 C ATOM 496 O THR 144 7.012 -0.324 -30.996 1.00 3.00 O ATOM 497 N VAL 145 7.753 1.212 -32.458 1.00 3.00 N ATOM 498 CA VAL 145 6.989 0.730 -33.621 1.00 3.00 C ATOM 499 C VAL 145 7.956 0.169 -34.698 1.00 3.00 C ATOM 500 O VAL 145 8.822 0.900 -35.183 1.00 3.00 O ATOM 501 N LYS 146 7.828 -1.117 -35.051 1.00 3.00 N ATOM 502 CA LYS 146 8.784 -1.796 -36.001 1.00 3.00 C ATOM 503 C LYS 146 8.109 -2.363 -37.260 1.00 3.00 C ATOM 504 O LYS 146 6.897 -2.415 -37.355 1.00 3.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 436 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 56.48 67.8 199 79.0 252 ARMSMC SECONDARY STRUCTURE . . 57.17 69.9 146 85.9 170 ARMSMC SURFACE . . . . . . . . 59.23 65.5 139 73.9 188 ARMSMC BURIED . . . . . . . . 49.51 73.3 60 93.8 64 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 101 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 96 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 70 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 77 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 24 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 82 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 66 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 59 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 59 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 23 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 29 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 28 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 17 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 23 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 11 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 11 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 6 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 8 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 3 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 4.01 (Number of atoms: 109) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 4.01 109 85.8 127 CRMSCA CRN = ALL/NP . . . . . 0.0367 CRMSCA SECONDARY STRUCTURE . . 3.83 76 89.4 85 CRMSCA SURFACE . . . . . . . . 4.41 77 81.1 95 CRMSCA BURIED . . . . . . . . 2.79 32 100.0 32 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 3.93 436 69.4 628 CRMSMC SECONDARY STRUCTURE . . 3.75 304 72.2 421 CRMSMC SURFACE . . . . . . . . 4.31 308 65.3 472 CRMSMC BURIED . . . . . . . . 2.83 128 82.1 156 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 0.00 0 0.0 518 CRMSSC RELIABLE SIDE CHAINS . 0.00 0 0.0 456 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 360 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 371 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 147 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 3.93 436 42.5 1026 CRMSALL SECONDARY STRUCTURE . . 3.75 304 43.4 700 CRMSALL SURFACE . . . . . . . . 4.31 308 41.0 751 CRMSALL BURIED . . . . . . . . 2.83 128 46.5 275 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.317 0.181 0.145 109 85.8 127 ERRCA SECONDARY STRUCTURE . . 1.214 0.171 0.143 76 89.4 85 ERRCA SURFACE . . . . . . . . 1.608 0.205 0.154 77 81.1 95 ERRCA BURIED . . . . . . . . 0.618 0.121 0.121 32 100.0 32 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.330 0.184 0.153 436 69.4 628 ERRMC SECONDARY STRUCTURE . . 1.223 0.173 0.147 304 72.2 421 ERRMC SURFACE . . . . . . . . 1.600 0.206 0.163 308 65.3 472 ERRMC BURIED . . . . . . . . 0.680 0.132 0.130 128 82.1 156 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.000 0.000 0.000 0 0.0 518 ERRSC RELIABLE SIDE CHAINS . 0.000 0.000 0.000 0 0.0 456 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 360 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 371 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 147 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.330 0.184 0.153 436 42.5 1026 ERRALL SECONDARY STRUCTURE . . 1.223 0.173 0.147 304 43.4 700 ERRALL SURFACE . . . . . . . . 1.600 0.206 0.163 308 41.0 751 ERRALL BURIED . . . . . . . . 0.680 0.132 0.130 128 46.5 275 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 22 59 89 107 109 127 DISTCA CA (P) 0.00 17.32 46.46 70.08 84.25 127 DISTCA CA (RMS) 0.00 1.58 2.27 2.80 3.78 DISTCA ALL (N) 4 95 255 369 428 436 1026 DISTALL ALL (P) 0.39 9.26 24.85 35.96 41.72 1026 DISTALL ALL (RMS) 0.77 1.55 2.29 2.83 3.68 DISTALL END of the results output