####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 33 ( 341), selected 33 , name T0596TS029_1-D1 # Molecule2: number of CA atoms 53 ( 422), selected 33 , name T0596-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0596TS029_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 33 26 - 58 1.31 1.31 LCS_AVERAGE: 62.26 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 33 26 - 58 1.31 1.31 LCS_AVERAGE: 62.26 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 27 27 - 53 0.99 1.37 LCS_AVERAGE: 46.48 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 33 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT E 26 E 26 14 33 33 0 3 3 4 29 33 33 33 33 33 33 33 33 33 33 33 33 33 33 33 LCS_GDT A 27 A 27 27 33 33 9 19 27 30 32 33 33 33 33 33 33 33 33 33 33 33 33 33 33 33 LCS_GDT V 28 V 28 27 33 33 3 12 27 30 32 33 33 33 33 33 33 33 33 33 33 33 33 33 33 33 LCS_GDT R 29 R 29 27 33 33 10 19 27 30 32 33 33 33 33 33 33 33 33 33 33 33 33 33 33 33 LCS_GDT L 30 L 30 27 33 33 10 19 27 30 32 33 33 33 33 33 33 33 33 33 33 33 33 33 33 33 LCS_GDT Y 31 Y 31 27 33 33 10 19 27 30 32 33 33 33 33 33 33 33 33 33 33 33 33 33 33 33 LCS_GDT D 32 D 32 27 33 33 10 19 27 30 32 33 33 33 33 33 33 33 33 33 33 33 33 33 33 33 LCS_GDT I 33 I 33 27 33 33 10 19 27 30 32 33 33 33 33 33 33 33 33 33 33 33 33 33 33 33 LCS_GDT A 34 A 34 27 33 33 10 19 27 30 32 33 33 33 33 33 33 33 33 33 33 33 33 33 33 33 LCS_GDT A 35 A 35 27 33 33 10 19 27 30 32 33 33 33 33 33 33 33 33 33 33 33 33 33 33 33 LCS_GDT R 36 R 36 27 33 33 10 19 27 30 32 33 33 33 33 33 33 33 33 33 33 33 33 33 33 33 LCS_GDT L 37 L 37 27 33 33 10 19 27 30 32 33 33 33 33 33 33 33 33 33 33 33 33 33 33 33 LCS_GDT A 38 A 38 27 33 33 9 19 27 30 32 33 33 33 33 33 33 33 33 33 33 33 33 33 33 33 LCS_GDT V 39 V 39 27 33 33 9 19 27 30 32 33 33 33 33 33 33 33 33 33 33 33 33 33 33 33 LCS_GDT S 40 S 40 27 33 33 5 17 27 30 32 33 33 33 33 33 33 33 33 33 33 33 33 33 33 33 LCS_GDT L 41 L 41 27 33 33 5 19 27 30 32 33 33 33 33 33 33 33 33 33 33 33 33 33 33 33 LCS_GDT D 42 D 42 27 33 33 5 19 27 30 32 33 33 33 33 33 33 33 33 33 33 33 33 33 33 33 LCS_GDT E 43 E 43 27 33 33 5 8 27 30 32 33 33 33 33 33 33 33 33 33 33 33 33 33 33 33 LCS_GDT I 44 I 44 27 33 33 10 19 27 30 32 33 33 33 33 33 33 33 33 33 33 33 33 33 33 33 LCS_GDT R 45 R 45 27 33 33 9 19 27 30 32 33 33 33 33 33 33 33 33 33 33 33 33 33 33 33 LCS_GDT L 46 L 46 27 33 33 6 19 27 30 32 33 33 33 33 33 33 33 33 33 33 33 33 33 33 33 LCS_GDT Y 47 Y 47 27 33 33 5 19 27 30 32 33 33 33 33 33 33 33 33 33 33 33 33 33 33 33 LCS_GDT F 48 F 48 27 33 33 5 19 27 30 32 33 33 33 33 33 33 33 33 33 33 33 33 33 33 33 LCS_GDT R 49 R 49 27 33 33 3 3 13 30 32 33 33 33 33 33 33 33 33 33 33 33 33 33 33 33 LCS_GDT E 50 E 50 27 33 33 5 19 27 30 32 33 33 33 33 33 33 33 33 33 33 33 33 33 33 33 LCS_GDT K 51 K 51 27 33 33 5 11 27 30 32 33 33 33 33 33 33 33 33 33 33 33 33 33 33 33 LCS_GDT D 52 D 52 27 33 33 5 18 27 30 32 33 33 33 33 33 33 33 33 33 33 33 33 33 33 33 LCS_GDT E 53 E 53 27 33 33 8 19 27 30 32 33 33 33 33 33 33 33 33 33 33 33 33 33 33 33 LCS_GDT L 54 L 54 14 33 33 6 11 18 30 32 33 33 33 33 33 33 33 33 33 33 33 33 33 33 33 LCS_GDT I 55 I 55 14 33 33 6 11 14 28 32 33 33 33 33 33 33 33 33 33 33 33 33 33 33 33 LCS_GDT D 56 D 56 14 33 33 6 11 23 30 32 33 33 33 33 33 33 33 33 33 33 33 33 33 33 33 LCS_GDT A 57 A 57 14 33 33 6 18 27 30 32 33 33 33 33 33 33 33 33 33 33 33 33 33 33 33 LCS_GDT W 58 W 58 14 33 33 6 11 14 29 32 33 33 33 33 33 33 33 33 33 33 33 33 33 33 33 LCS_AVERAGE LCS_A: 57.00 ( 46.48 62.26 62.26 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 19 27 30 32 33 33 33 33 33 33 33 33 33 33 33 33 33 33 33 GDT PERCENT_AT 18.87 35.85 50.94 56.60 60.38 62.26 62.26 62.26 62.26 62.26 62.26 62.26 62.26 62.26 62.26 62.26 62.26 62.26 62.26 62.26 GDT RMS_LOCAL 0.25 0.67 0.92 1.08 1.22 1.31 1.31 1.31 1.31 1.31 1.31 1.31 1.31 1.31 1.31 1.31 1.31 1.31 1.31 1.31 GDT RMS_ALL_AT 2.05 1.45 1.36 1.33 1.31 1.31 1.31 1.31 1.31 1.31 1.31 1.31 1.31 1.31 1.31 1.31 1.31 1.31 1.31 1.31 # Checking swapping # possible swapping detected: D 42 D 42 # possible swapping detected: E 43 E 43 # possible swapping detected: Y 47 Y 47 # possible swapping detected: E 50 E 50 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA E 26 E 26 2.945 0 0.530 0.581 8.938 71.548 40.212 LGA A 27 A 27 0.990 0 0.220 0.238 1.650 83.810 81.619 LGA V 28 V 28 1.385 0 0.136 0.219 2.953 88.214 75.986 LGA R 29 R 29 0.615 0 0.074 1.381 6.301 95.238 66.797 LGA L 30 L 30 0.562 0 0.040 1.269 3.720 95.238 83.631 LGA Y 31 Y 31 0.329 7 0.034 0.034 0.543 97.619 40.079 LGA D 32 D 32 0.394 0 0.039 0.200 0.906 97.619 97.619 LGA I 33 I 33 0.687 0 0.021 0.648 2.506 90.476 86.310 LGA A 34 A 34 1.000 0 0.037 0.039 1.222 85.952 85.048 LGA A 35 A 35 0.990 0 0.111 0.118 1.008 88.214 88.667 LGA R 36 R 36 1.015 0 0.074 1.089 4.663 83.690 73.896 LGA L 37 L 37 1.219 0 0.140 0.438 1.954 85.952 80.476 LGA A 38 A 38 0.898 0 0.039 0.035 1.200 92.857 90.571 LGA V 39 V 39 0.556 0 0.099 0.141 0.880 92.857 95.918 LGA S 40 S 40 1.568 0 0.157 0.299 2.042 77.143 73.016 LGA L 41 L 41 1.315 0 0.054 0.142 1.387 81.429 81.429 LGA D 42 D 42 1.226 0 0.057 0.210 1.521 81.429 81.488 LGA E 43 E 43 1.552 0 0.028 0.938 2.608 79.286 73.069 LGA I 44 I 44 1.382 0 0.036 0.141 2.520 85.952 76.429 LGA R 45 R 45 0.493 0 0.071 1.188 4.968 97.619 78.182 LGA L 46 L 46 0.577 0 0.038 0.139 1.947 90.595 83.929 LGA Y 47 Y 47 0.824 0 0.192 0.188 1.750 92.857 85.317 LGA F 48 F 48 1.280 0 0.111 0.119 1.934 77.143 83.983 LGA R 49 R 49 2.142 0 0.161 0.863 7.080 70.833 42.294 LGA E 50 E 50 0.808 0 0.117 0.813 2.020 90.476 84.656 LGA K 51 K 51 1.159 0 0.048 0.932 5.916 81.429 68.042 LGA D 52 D 52 0.905 0 0.048 0.295 2.556 92.857 83.036 LGA E 53 E 53 0.157 0 0.046 0.858 4.705 95.238 76.667 LGA L 54 L 54 1.651 0 0.102 1.378 3.809 75.000 69.226 LGA I 55 I 55 2.398 0 0.061 0.171 3.466 66.786 59.286 LGA D 56 D 56 1.786 0 0.089 0.346 3.889 75.000 66.310 LGA A 57 A 57 0.666 0 0.073 0.080 1.116 88.214 88.667 LGA W 58 W 58 2.372 0 0.046 1.655 9.144 62.976 30.170 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 33 132 132 100.00 272 272 100.00 53 SUMMARY(RMSD_GDC): 1.311 1.212 2.522 53.048 46.642 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 33 53 4.0 33 1.31 54.245 58.813 2.340 LGA_LOCAL RMSD: 1.311 Number of atoms: 33 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 1.311 Number of assigned atoms: 33 Std_ASGN_ATOMS RMSD: 1.311 Standard rmsd on all 33 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.329544 * X + 0.421522 * Y + 0.844820 * Z + 10.846805 Y_new = 0.674508 * X + -0.521003 * Y + 0.523063 * Z + 9.452640 Z_new = 0.660636 * X + 0.742210 * Y + -0.112627 * Z + 20.536100 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.025257 -0.721666 1.721393 [DEG: 116.0387 -41.3484 98.6285 ] ZXZ: 2.125172 1.683663 0.727315 [DEG: 121.7634 96.4668 41.6721 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0596TS029_1-D1 REMARK 2: T0596-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0596TS029_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 33 53 4.0 33 1.31 58.813 1.31 REMARK ---------------------------------------------------------- MOLECULE T0596TS029_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0596 REMARK MODEL 1 REMARK PARENT 2w53_A ATOM 236 N GLU 26 30.602 38.174 46.431 1.00 0.00 N ATOM 237 CA GLU 26 30.206 39.326 47.170 1.00 0.00 C ATOM 238 C GLU 26 29.263 38.919 48.233 1.00 0.00 C ATOM 239 O GLU 26 28.055 39.150 48.168 1.00 0.00 O ATOM 240 H GLU 26 30.188 37.972 45.658 1.00 0.00 H ATOM 241 CB GLU 26 29.576 40.367 46.243 1.00 0.00 C ATOM 242 CD GLU 26 28.613 42.687 45.977 1.00 0.00 C ATOM 243 CG GLU 26 29.217 41.675 46.930 1.00 0.00 C ATOM 244 OE1 GLU 26 28.616 42.428 44.755 1.00 0.00 O ATOM 245 OE2 GLU 26 28.139 43.741 46.451 1.00 0.00 O ATOM 246 N ALA 27 29.769 38.127 49.179 1.00 0.00 N ATOM 247 CA ALA 27 29.113 38.194 50.422 1.00 0.00 C ATOM 248 C ALA 27 29.673 39.498 50.912 1.00 0.00 C ATOM 249 O ALA 27 29.012 40.340 51.505 1.00 0.00 O ATOM 250 H ALA 27 30.473 37.577 49.071 1.00 0.00 H ATOM 251 CB ALA 27 29.435 36.965 51.259 1.00 0.00 C ATOM 252 N VAL 28 30.983 39.643 50.575 1.00 0.00 N ATOM 253 CA VAL 28 31.915 40.682 50.927 1.00 0.00 C ATOM 254 C VAL 28 31.909 41.798 49.929 1.00 0.00 C ATOM 255 O VAL 28 31.587 41.620 48.756 1.00 0.00 O ATOM 256 H VAL 28 31.248 38.958 50.056 1.00 0.00 H ATOM 257 CB VAL 28 33.346 40.132 51.069 1.00 0.00 C ATOM 258 CG1 VAL 28 34.327 41.261 51.347 1.00 0.00 C ATOM 259 CG2 VAL 28 33.408 39.085 52.172 1.00 0.00 C ATOM 260 N ARG 29 32.295 42.996 50.419 1.00 0.00 N ATOM 261 CA ARG 29 32.242 44.222 49.680 1.00 0.00 C ATOM 262 C ARG 29 33.632 44.685 49.375 1.00 0.00 C ATOM 263 O ARG 29 34.613 44.163 49.900 1.00 0.00 O ATOM 264 H ARG 29 32.601 42.994 51.265 1.00 0.00 H ATOM 265 CB ARG 29 31.472 45.287 50.464 1.00 0.00 C ATOM 266 CD ARG 29 29.294 46.065 51.439 1.00 0.00 C ATOM 267 HE ARG 29 27.608 44.980 51.420 1.00 0.00 H ATOM 268 NE ARG 29 27.886 45.754 51.674 1.00 0.00 N ATOM 269 CG ARG 29 30.009 44.946 50.700 1.00 0.00 C ATOM 270 CZ ARG 29 27.023 46.586 52.248 1.00 0.00 C ATOM 271 HH11 ARG 29 25.502 45.439 52.162 1.00 0.00 H ATOM 272 HH12 ARG 29 25.203 46.755 52.792 1.00 0.00 H ATOM 273 NH1 ARG 29 25.761 46.217 52.420 1.00 0.00 N ATOM 274 HH21 ARG 29 28.242 48.024 52.536 1.00 0.00 H ATOM 275 HH22 ARG 29 26.865 48.324 53.019 1.00 0.00 H ATOM 276 NH2 ARG 29 27.424 47.785 52.648 1.00 0.00 N ATOM 277 N LEU 30 33.731 45.682 48.472 1.00 0.00 N ATOM 278 CA LEU 30 34.977 46.253 48.043 1.00 0.00 C ATOM 279 C LEU 30 35.631 46.926 49.205 1.00 0.00 C ATOM 280 O LEU 30 36.855 46.929 49.322 1.00 0.00 O ATOM 281 H LEU 30 32.955 45.989 48.134 1.00 0.00 H ATOM 282 CB LEU 30 34.748 47.235 46.892 1.00 0.00 C ATOM 283 CG LEU 30 34.312 46.627 45.558 1.00 0.00 C ATOM 284 CD1 LEU 30 33.946 47.718 44.563 1.00 0.00 C ATOM 285 CD2 LEU 30 35.407 45.737 44.989 1.00 0.00 C ATOM 286 N TYR 31 34.827 47.536 50.094 1.00 0.00 N ATOM 287 CA TYR 31 35.409 48.187 51.229 1.00 0.00 C ATOM 288 C TYR 31 36.129 47.162 52.039 1.00 0.00 C ATOM 289 O TYR 31 37.243 47.403 52.497 1.00 0.00 O ATOM 290 H TYR 31 33.934 47.538 49.982 1.00 0.00 H ATOM 291 CB TYR 31 34.331 48.898 52.049 1.00 0.00 C ATOM 292 CG TYR 31 34.863 49.618 53.268 1.00 0.00 C ATOM 293 HH TYR 31 36.675 52.327 56.372 1.00 0.00 H ATOM 294 OH TYR 31 36.333 51.609 56.609 1.00 0.00 O ATOM 295 CZ TYR 31 35.847 50.949 55.504 1.00 0.00 C ATOM 296 CD1 TYR 31 35.488 50.852 53.148 1.00 0.00 C ATOM 297 CE1 TYR 31 35.978 51.517 54.256 1.00 0.00 C ATOM 298 CD2 TYR 31 34.739 49.060 54.534 1.00 0.00 C ATOM 299 CE2 TYR 31 35.223 49.711 55.653 1.00 0.00 C ATOM 300 N ASP 32 35.514 45.981 52.232 1.00 0.00 N ATOM 301 CA ASP 32 36.117 44.981 53.063 1.00 0.00 C ATOM 302 C ASP 32 37.434 44.573 52.479 1.00 0.00 C ATOM 303 O ASP 32 38.428 44.464 53.195 1.00 0.00 O ATOM 304 H ASP 32 34.722 45.820 51.836 1.00 0.00 H ATOM 305 CB ASP 32 35.187 43.775 53.211 1.00 0.00 C ATOM 306 CG ASP 32 33.983 44.071 54.084 1.00 0.00 C ATOM 307 OD1 ASP 32 34.001 45.100 54.790 1.00 0.00 O ATOM 308 OD2 ASP 32 33.022 43.273 54.061 1.00 0.00 O ATOM 309 N ILE 33 37.486 44.360 51.152 1.00 0.00 N ATOM 310 CA ILE 33 38.708 43.922 50.539 1.00 0.00 C ATOM 311 C ILE 33 39.727 44.983 50.762 1.00 0.00 C ATOM 312 O ILE 33 40.875 44.710 51.108 1.00 0.00 O ATOM 313 H ILE 33 36.753 44.492 50.648 1.00 0.00 H ATOM 314 CB ILE 33 38.512 43.623 49.042 1.00 0.00 C ATOM 315 CD1 ILE 33 38.041 41.155 49.470 1.00 0.00 C ATOM 316 CG1 ILE 33 37.551 42.447 48.854 1.00 0.00 C ATOM 317 CG2 ILE 33 39.853 43.373 48.369 1.00 0.00 C ATOM 318 N ALA 34 39.309 46.240 50.576 1.00 0.00 N ATOM 319 CA ALA 34 40.184 47.357 50.723 1.00 0.00 C ATOM 320 C ALA 34 40.688 47.397 52.133 1.00 0.00 C ATOM 321 O ALA 34 41.876 47.601 52.372 1.00 0.00 O ATOM 322 H ALA 34 38.447 46.370 50.353 1.00 0.00 H ATOM 323 CB ALA 34 39.464 48.647 50.357 1.00 0.00 C ATOM 324 N ALA 35 39.783 47.183 53.105 1.00 0.00 N ATOM 325 CA ALA 35 40.115 47.247 54.501 1.00 0.00 C ATOM 326 C ALA 35 41.100 46.174 54.835 1.00 0.00 C ATOM 327 O ALA 35 42.029 46.392 55.610 1.00 0.00 O ATOM 328 H ALA 35 38.941 46.993 52.852 1.00 0.00 H ATOM 329 CB ALA 35 38.861 47.116 55.351 1.00 0.00 C ATOM 330 N ARG 36 40.915 44.978 54.247 1.00 0.00 N ATOM 331 CA ARG 36 41.758 43.857 54.548 1.00 0.00 C ATOM 332 C ARG 36 43.155 44.216 54.164 1.00 0.00 C ATOM 333 O ARG 36 44.114 43.935 54.881 1.00 0.00 O ATOM 334 H ARG 36 40.244 44.890 53.653 1.00 0.00 H ATOM 335 CB ARG 36 41.270 42.607 53.813 1.00 0.00 C ATOM 336 CD ARG 36 41.492 40.139 53.411 1.00 0.00 C ATOM 337 HE ARG 36 41.873 38.428 54.386 1.00 0.00 H ATOM 338 NE ARG 36 42.205 38.911 53.756 1.00 0.00 N ATOM 339 CG ARG 36 42.057 41.348 54.139 1.00 0.00 C ATOM 340 CZ ARG 36 43.319 38.502 53.158 1.00 0.00 C ATOM 341 HH11 ARG 36 43.552 36.902 54.169 1.00 0.00 H ATOM 342 HH12 ARG 36 44.620 37.107 53.149 1.00 0.00 H ATOM 343 NH1 ARG 36 43.898 37.371 53.537 1.00 0.00 N ATOM 344 HH21 ARG 36 43.477 39.960 51.937 1.00 0.00 H ATOM 345 HH22 ARG 36 44.573 38.961 51.796 1.00 0.00 H ATOM 346 NH2 ARG 36 43.853 39.226 52.182 1.00 0.00 N ATOM 347 N LEU 37 43.288 44.865 53.000 1.00 0.00 N ATOM 348 CA LEU 37 44.549 45.261 52.459 1.00 0.00 C ATOM 349 C LEU 37 45.071 46.348 53.364 1.00 0.00 C ATOM 350 O LEU 37 46.267 46.634 53.387 1.00 0.00 O ATOM 351 H LEU 37 42.528 45.049 52.554 1.00 0.00 H ATOM 352 CB LEU 37 44.387 45.727 51.010 1.00 0.00 C ATOM 353 CG LEU 37 43.984 44.655 49.995 1.00 0.00 C ATOM 354 CD1 LEU 37 43.726 45.277 48.631 1.00 0.00 C ATOM 355 CD2 LEU 37 45.056 43.580 49.893 1.00 0.00 C ATOM 356 N ALA 38 44.174 46.931 54.194 1.00 0.00 N ATOM 357 CA ALA 38 44.501 48.031 55.069 1.00 0.00 C ATOM 358 C ALA 38 44.601 49.294 54.281 1.00 0.00 C ATOM 359 O ALA 38 45.448 50.149 54.537 1.00 0.00 O ATOM 360 H ALA 38 43.337 46.599 54.183 1.00 0.00 H ATOM 361 CB ALA 38 45.800 47.751 55.808 1.00 0.00 C ATOM 362 N VAL 39 43.700 49.423 53.291 1.00 0.00 N ATOM 363 CA VAL 39 43.608 50.579 52.454 1.00 0.00 C ATOM 364 C VAL 39 42.132 50.845 52.314 1.00 0.00 C ATOM 365 O VAL 39 41.334 50.197 52.988 1.00 0.00 O ATOM 366 H VAL 39 43.136 48.732 53.169 1.00 0.00 H ATOM 367 CB VAL 39 44.310 50.354 51.102 1.00 0.00 C ATOM 368 CG1 VAL 39 45.791 50.078 51.310 1.00 0.00 C ATOM 369 CG2 VAL 39 43.653 49.212 50.343 1.00 0.00 C ATOM 370 N SER 40 41.733 51.863 51.523 1.00 0.00 N ATOM 371 CA SER 40 40.349 52.192 51.319 1.00 0.00 C ATOM 372 C SER 40 39.880 51.507 50.069 1.00 0.00 C ATOM 373 O SER 40 40.652 50.844 49.379 1.00 0.00 O ATOM 374 H SER 40 42.375 52.345 51.115 1.00 0.00 H ATOM 375 CB SER 40 40.164 53.708 51.232 1.00 0.00 C ATOM 376 HG SER 40 40.632 55.047 50.022 1.00 0.00 H ATOM 377 OG SER 40 40.744 54.225 50.047 1.00 0.00 O ATOM 378 N LEU 41 38.573 51.644 49.765 1.00 0.00 N ATOM 379 CA LEU 41 37.911 51.049 48.636 1.00 0.00 C ATOM 380 C LEU 41 38.572 51.612 47.419 1.00 0.00 C ATOM 381 O LEU 41 38.738 50.922 46.416 1.00 0.00 O ATOM 382 H LEU 41 38.108 52.157 50.339 1.00 0.00 H ATOM 383 CB LEU 41 36.410 51.342 48.679 1.00 0.00 C ATOM 384 CG LEU 41 35.566 50.727 47.560 1.00 0.00 C ATOM 385 CD1 LEU 41 35.673 49.211 47.577 1.00 0.00 C ATOM 386 CD2 LEU 41 34.113 51.157 47.685 1.00 0.00 C ATOM 387 N ASP 42 39.000 52.881 47.491 1.00 0.00 N ATOM 388 CA ASP 42 39.572 53.559 46.365 1.00 0.00 C ATOM 389 C ASP 42 40.713 52.723 45.889 1.00 0.00 C ATOM 390 O ASP 42 40.974 52.630 44.691 1.00 0.00 O ATOM 391 H ASP 42 38.918 53.308 48.279 1.00 0.00 H ATOM 392 CB ASP 42 40.011 54.971 46.755 1.00 0.00 C ATOM 393 CG ASP 42 38.837 55.905 46.979 1.00 0.00 C ATOM 394 OD1 ASP 42 37.710 55.549 46.576 1.00 0.00 O ATOM 395 OD2 ASP 42 39.044 56.993 47.557 1.00 0.00 O ATOM 396 N GLU 43 41.391 52.050 46.832 1.00 0.00 N ATOM 397 CA GLU 43 42.518 51.232 46.504 1.00 0.00 C ATOM 398 C GLU 43 42.113 50.183 45.522 1.00 0.00 C ATOM 399 O GLU 43 42.819 49.951 44.544 1.00 0.00 O ATOM 400 H GLU 43 41.122 52.123 47.688 1.00 0.00 H ATOM 401 CB GLU 43 43.104 50.596 47.767 1.00 0.00 C ATOM 402 CD GLU 43 45.032 52.200 48.070 1.00 0.00 C ATOM 403 CG GLU 43 43.796 51.582 48.694 1.00 0.00 C ATOM 404 OE1 GLU 43 45.896 51.440 47.587 1.00 0.00 O ATOM 405 OE2 GLU 43 45.136 53.445 48.065 1.00 0.00 O ATOM 406 N ILE 44 40.974 49.510 45.753 1.00 0.00 N ATOM 407 CA ILE 44 40.585 48.448 44.871 1.00 0.00 C ATOM 408 C ILE 44 40.266 49.022 43.526 1.00 0.00 C ATOM 409 O ILE 44 40.632 48.463 42.494 1.00 0.00 O ATOM 410 H ILE 44 40.456 49.722 46.458 1.00 0.00 H ATOM 411 CB ILE 44 39.388 47.658 45.431 1.00 0.00 C ATOM 412 CD1 ILE 44 40.921 46.009 46.627 1.00 0.00 C ATOM 413 CG1 ILE 44 39.766 46.980 46.749 1.00 0.00 C ATOM 414 CG2 ILE 44 38.883 46.657 44.404 1.00 0.00 C ATOM 415 N ARG 45 39.590 50.183 43.508 1.00 0.00 N ATOM 416 CA ARG 45 39.148 50.807 42.290 1.00 0.00 C ATOM 417 C ARG 45 40.340 51.157 41.455 1.00 0.00 C ATOM 418 O ARG 45 40.265 51.183 40.227 1.00 0.00 O ATOM 419 H ARG 45 39.416 50.571 44.301 1.00 0.00 H ATOM 420 CB ARG 45 38.308 52.048 42.599 1.00 0.00 C ATOM 421 CD ARG 45 36.184 53.018 43.519 1.00 0.00 C ATOM 422 HE ARG 45 34.592 51.922 44.056 1.00 0.00 H ATOM 423 NE ARG 45 34.858 52.742 44.068 1.00 0.00 N ATOM 424 CG ARG 45 36.942 51.742 43.190 1.00 0.00 C ATOM 425 CZ ARG 45 34.052 53.668 44.576 1.00 0.00 C ATOM 426 HH11 ARG 45 32.615 52.500 45.033 1.00 0.00 H ATOM 427 HH12 ARG 45 32.343 53.922 45.382 1.00 0.00 H ATOM 428 NH1 ARG 45 32.864 53.323 45.053 1.00 0.00 N ATOM 429 HH21 ARG 45 35.207 55.160 44.298 1.00 0.00 H ATOM 430 HH22 ARG 45 33.915 55.536 44.936 1.00 0.00 H ATOM 431 NH2 ARG 45 34.437 54.936 44.607 1.00 0.00 N ATOM 432 N LEU 46 41.480 51.438 42.103 1.00 0.00 N ATOM 433 CA LEU 46 42.626 51.868 41.366 1.00 0.00 C ATOM 434 C LEU 46 42.980 50.786 40.392 1.00 0.00 C ATOM 435 O LEU 46 43.325 51.084 39.250 1.00 0.00 O ATOM 436 H LEU 46 41.526 51.357 42.998 1.00 0.00 H ATOM 437 CB LEU 46 43.786 52.182 42.313 1.00 0.00 C ATOM 438 CG LEU 46 43.620 53.414 43.204 1.00 0.00 C ATOM 439 CD1 LEU 46 44.753 53.504 44.215 1.00 0.00 C ATOM 440 CD2 LEU 46 43.561 54.681 42.363 1.00 0.00 C ATOM 441 N TYR 47 42.898 49.495 40.788 1.00 0.00 N ATOM 442 CA TYR 47 43.317 48.515 39.826 1.00 0.00 C ATOM 443 C TYR 47 42.165 47.690 39.329 1.00 0.00 C ATOM 444 O TYR 47 42.348 46.908 38.396 1.00 0.00 O ATOM 445 H TYR 47 42.603 49.233 41.597 1.00 0.00 H ATOM 446 CB TYR 47 44.386 47.600 40.424 1.00 0.00 C ATOM 447 CG TYR 47 45.651 48.320 40.834 1.00 0.00 C ATOM 448 HH TYR 47 49.638 50.354 41.328 1.00 0.00 H ATOM 449 OH TYR 47 49.122 50.305 41.976 1.00 0.00 O ATOM 450 CZ TYR 47 47.974 49.647 41.597 1.00 0.00 C ATOM 451 CD1 TYR 47 45.814 48.787 42.132 1.00 0.00 C ATOM 452 CE1 TYR 47 46.966 49.446 42.516 1.00 0.00 C ATOM 453 CD2 TYR 47 46.676 48.532 39.922 1.00 0.00 C ATOM 454 CE2 TYR 47 47.835 49.190 40.287 1.00 0.00 C ATOM 455 N PHE 48 40.944 47.834 39.888 1.00 0.00 N ATOM 456 CA PHE 48 39.878 47.018 39.362 1.00 0.00 C ATOM 457 C PHE 48 38.651 47.857 39.188 1.00 0.00 C ATOM 458 O PHE 48 38.328 48.702 40.022 1.00 0.00 O ATOM 459 H PHE 48 40.781 48.409 40.561 1.00 0.00 H ATOM 460 CB PHE 48 39.605 45.830 40.289 1.00 0.00 C ATOM 461 CG PHE 48 40.783 44.915 40.462 1.00 0.00 C ATOM 462 CZ PHE 48 42.958 43.214 40.777 1.00 0.00 C ATOM 463 CD1 PHE 48 41.717 45.145 41.456 1.00 0.00 C ATOM 464 CE1 PHE 48 42.800 44.301 41.615 1.00 0.00 C ATOM 465 CD2 PHE 48 40.955 43.822 39.631 1.00 0.00 C ATOM 466 CE2 PHE 48 42.038 42.977 39.790 1.00 0.00 C ATOM 467 N ARG 49 37.931 47.634 38.070 1.00 0.00 N ATOM 468 CA ARG 49 36.730 48.363 37.775 1.00 0.00 C ATOM 469 C ARG 49 35.676 48.027 38.780 1.00 0.00 C ATOM 470 O ARG 49 35.002 48.914 39.303 1.00 0.00 O ATOM 471 H ARG 49 38.227 47.004 37.500 1.00 0.00 H ATOM 472 CB ARG 49 36.249 48.051 36.356 1.00 0.00 C ATOM 473 CD ARG 49 34.552 48.419 34.544 1.00 0.00 C ATOM 474 HE ARG 49 34.751 46.470 34.113 1.00 0.00 H ATOM 475 NE ARG 49 34.175 47.009 34.456 1.00 0.00 N ATOM 476 CG ARG 49 34.994 48.803 35.947 1.00 0.00 C ATOM 477 CZ ARG 49 33.010 46.522 34.870 1.00 0.00 C ATOM 478 HH11 ARG 49 33.342 44.702 34.404 1.00 0.00 H ATOM 479 HH12 ARG 49 32.000 44.910 35.018 1.00 0.00 H ATOM 480 NH1 ARG 49 32.754 45.227 34.750 1.00 0.00 N ATOM 481 HH21 ARG 49 32.270 48.170 35.482 1.00 0.00 H ATOM 482 HH22 ARG 49 31.351 47.013 35.671 1.00 0.00 H ATOM 483 NH2 ARG 49 32.104 47.330 35.403 1.00 0.00 N ATOM 484 N GLU 50 35.512 46.727 39.089 1.00 0.00 N ATOM 485 CA GLU 50 34.459 46.352 39.984 1.00 0.00 C ATOM 486 C GLU 50 34.839 45.071 40.649 1.00 0.00 C ATOM 487 O GLU 50 35.917 44.530 40.422 1.00 0.00 O ATOM 488 H GLU 50 36.053 46.097 38.741 1.00 0.00 H ATOM 489 CB GLU 50 33.135 46.222 39.230 1.00 0.00 C ATOM 490 CD GLU 50 31.836 45.101 37.376 1.00 0.00 C ATOM 491 CG GLU 50 33.138 45.151 38.151 1.00 0.00 C ATOM 492 OE1 GLU 50 30.900 45.843 37.739 1.00 0.00 O ATOM 493 OE2 GLU 50 31.753 44.320 36.404 1.00 0.00 O ATOM 494 N LYS 51 33.946 44.572 41.520 1.00 0.00 N ATOM 495 CA LYS 51 34.186 43.373 42.259 1.00 0.00 C ATOM 496 C LYS 51 34.305 42.222 41.301 1.00 0.00 C ATOM 497 O LYS 51 35.151 41.350 41.486 1.00 0.00 O ATOM 498 H LYS 51 33.174 45.022 41.630 1.00 0.00 H ATOM 499 CB LYS 51 33.065 43.134 43.272 1.00 0.00 C ATOM 500 CD LYS 51 34.449 42.023 45.046 1.00 0.00 C ATOM 501 CE LYS 51 34.562 40.832 45.982 1.00 0.00 C ATOM 502 CG LYS 51 33.250 41.888 44.121 1.00 0.00 C ATOM 503 HZ1 LYS 51 35.801 40.211 47.387 1.00 0.00 H ATOM 504 HZ2 LYS 51 35.721 41.661 47.347 1.00 0.00 H ATOM 505 HZ3 LYS 51 36.498 40.949 46.347 1.00 0.00 H ATOM 506 NZ LYS 51 35.767 40.921 46.854 1.00 0.00 N ATOM 507 N ASP 52 33.481 42.202 40.234 1.00 0.00 N ATOM 508 CA ASP 52 33.479 41.106 39.296 1.00 0.00 C ATOM 509 C ASP 52 34.835 40.996 38.677 1.00 0.00 C ATOM 510 O ASP 52 35.343 39.896 38.468 1.00 0.00 O ATOM 511 H ASP 52 32.921 42.897 40.115 1.00 0.00 H ATOM 512 CB ASP 52 32.399 41.314 38.232 1.00 0.00 C ATOM 513 CG ASP 52 30.998 41.121 38.779 1.00 0.00 C ATOM 514 OD1 ASP 52 30.865 40.566 39.889 1.00 0.00 O ATOM 515 OD2 ASP 52 30.033 41.525 38.096 1.00 0.00 O ATOM 516 N GLU 53 35.464 42.138 38.345 1.00 0.00 N ATOM 517 CA GLU 53 36.766 42.076 37.743 1.00 0.00 C ATOM 518 C GLU 53 37.733 41.533 38.742 1.00 0.00 C ATOM 519 O GLU 53 38.653 40.795 38.393 1.00 0.00 O ATOM 520 H GLU 53 35.076 42.935 38.497 1.00 0.00 H ATOM 521 CB GLU 53 37.194 43.459 37.250 1.00 0.00 C ATOM 522 CD GLU 53 36.555 43.100 34.834 1.00 0.00 C ATOM 523 CG GLU 53 36.394 43.971 36.063 1.00 0.00 C ATOM 524 OE1 GLU 53 37.577 42.390 34.738 1.00 0.00 O ATOM 525 OE2 GLU 53 35.657 43.127 33.964 1.00 0.00 O ATOM 526 N LEU 54 37.554 41.886 40.026 1.00 0.00 N ATOM 527 CA LEU 54 38.516 41.443 40.987 1.00 0.00 C ATOM 528 C LEU 54 38.455 39.940 41.020 1.00 0.00 C ATOM 529 O LEU 54 39.488 39.273 40.982 1.00 0.00 O ATOM 530 H LEU 54 36.855 42.388 40.287 1.00 0.00 H ATOM 531 CB LEU 54 38.229 42.060 42.357 1.00 0.00 C ATOM 532 CG LEU 54 39.192 41.686 43.485 1.00 0.00 C ATOM 533 CD1 LEU 54 40.609 42.124 43.149 1.00 0.00 C ATOM 534 CD2 LEU 54 38.744 42.304 44.800 1.00 0.00 C ATOM 535 N ILE 55 37.228 39.364 41.029 1.00 0.00 N ATOM 536 CA ILE 55 37.070 37.937 41.160 1.00 0.00 C ATOM 537 C ILE 55 37.697 37.243 40.010 1.00 0.00 C ATOM 538 O ILE 55 38.361 36.218 40.167 1.00 0.00 O ATOM 539 H ILE 55 36.504 39.892 40.952 1.00 0.00 H ATOM 540 CB ILE 55 35.587 37.542 41.279 1.00 0.00 C ATOM 541 CD1 ILE 55 33.500 37.941 42.687 1.00 0.00 C ATOM 542 CG1 ILE 55 35.008 38.033 42.607 1.00 0.00 C ATOM 543 CG2 ILE 55 35.419 36.039 41.108 1.00 0.00 C ATOM 544 N ASP 56 37.512 37.807 38.814 1.00 0.00 N ATOM 545 CA ASP 56 38.030 37.183 37.646 1.00 0.00 C ATOM 546 C ASP 56 39.517 37.094 37.781 1.00 0.00 C ATOM 547 O ASP 56 40.111 36.073 37.443 1.00 0.00 O ATOM 548 H ASP 56 37.059 38.581 38.747 1.00 0.00 H ATOM 549 CB ASP 56 37.625 37.966 36.395 1.00 0.00 C ATOM 550 CG ASP 56 36.151 37.822 36.071 1.00 0.00 C ATOM 551 OD1 ASP 56 35.504 36.915 36.634 1.00 0.00 O ATOM 552 OD2 ASP 56 35.643 38.617 35.252 1.00 0.00 O ATOM 553 N ALA 57 40.155 38.172 38.278 1.00 0.00 N ATOM 554 CA ALA 57 41.584 38.200 38.411 1.00 0.00 C ATOM 555 C ALA 57 42.007 37.152 39.405 1.00 0.00 C ATOM 556 O ALA 57 42.990 36.445 39.190 1.00 0.00 O ATOM 557 H ALA 57 39.666 38.884 38.530 1.00 0.00 H ATOM 558 CB ALA 57 42.050 39.583 38.839 1.00 0.00 C ATOM 559 N TRP 58 41.251 37.003 40.511 1.00 0.00 N ATOM 560 CA TRP 58 41.618 36.104 41.570 1.00 0.00 C ATOM 561 C TRP 58 41.704 34.726 40.985 1.00 0.00 C ATOM 562 O TRP 58 42.666 33.989 41.199 1.00 0.00 O ATOM 563 H TRP 58 40.496 37.489 40.575 1.00 0.00 H ATOM 564 CB TRP 58 40.602 36.178 42.712 1.00 0.00 C ATOM 565 HB2 TRP 58 40.890 35.591 43.514 1.00 0.00 H ATOM 566 HB3 TRP 58 39.654 36.348 42.441 1.00 0.00 H ATOM 567 CG TRP 58 40.723 37.419 43.543 1.00 0.00 C ATOM 568 CD1 TRP 58 41.627 38.428 43.381 1.00 0.00 C ATOM 569 HE1 TRP 58 41.935 40.184 44.415 1.00 0.00 H ATOM 570 NE1 TRP 58 41.430 39.399 44.333 1.00 0.00 N ATOM 571 CD2 TRP 58 39.911 37.782 44.667 1.00 0.00 C ATOM 572 CE2 TRP 58 40.381 39.022 45.135 1.00 0.00 C ATOM 573 CH2 TRP 58 38.759 39.059 46.850 1.00 0.00 C ATOM 574 CZ2 TRP 58 39.811 39.672 46.229 1.00 0.00 C ATOM 575 CE3 TRP 58 38.835 37.178 45.322 1.00 0.00 C ATOM 576 CZ3 TRP 58 38.273 37.825 46.406 1.00 0.00 C TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 272 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 19.46 93.8 64 61.5 104 ARMSMC SECONDARY STRUCTURE . . 10.93 97.6 42 56.8 74 ARMSMC SURFACE . . . . . . . . 21.09 94.0 50 64.1 78 ARMSMC BURIED . . . . . . . . 11.96 92.9 14 53.8 26 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 49.20 70.4 27 62.8 43 ARMSSC1 RELIABLE SIDE CHAINS . 51.12 68.0 25 64.1 39 ARMSSC1 SECONDARY STRUCTURE . . 34.10 70.6 17 58.6 29 ARMSSC1 SURFACE . . . . . . . . 49.65 66.7 21 63.6 33 ARMSSC1 BURIED . . . . . . . . 47.57 83.3 6 60.0 10 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 73.61 54.2 24 68.6 35 ARMSSC2 RELIABLE SIDE CHAINS . 68.60 52.6 19 67.9 28 ARMSSC2 SECONDARY STRUCTURE . . 76.58 52.9 17 65.4 26 ARMSSC2 SURFACE . . . . . . . . 63.61 57.9 19 67.9 28 ARMSSC2 BURIED . . . . . . . . 103.10 40.0 5 71.4 7 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 50.33 55.6 9 75.0 12 ARMSSC3 RELIABLE SIDE CHAINS . 50.33 55.6 9 75.0 12 ARMSSC3 SECONDARY STRUCTURE . . 62.50 60.0 5 62.5 8 ARMSSC3 SURFACE . . . . . . . . 50.33 55.6 9 75.0 12 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 108.16 20.0 5 100.0 5 ARMSSC4 RELIABLE SIDE CHAINS . 108.16 20.0 5 100.0 5 ARMSSC4 SECONDARY STRUCTURE . . 77.33 33.3 3 100.0 3 ARMSSC4 SURFACE . . . . . . . . 108.16 20.0 5 100.0 5 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 1.31 (Number of atoms: 33) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 1.31 33 62.3 53 CRMSCA CRN = ALL/NP . . . . . 0.0397 CRMSCA SECONDARY STRUCTURE . . 1.14 21 56.8 37 CRMSCA SURFACE . . . . . . . . 1.34 26 65.0 40 CRMSCA BURIED . . . . . . . . 1.19 7 53.8 13 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 1.33 165 62.3 265 CRMSMC SECONDARY STRUCTURE . . 1.15 105 56.8 185 CRMSMC SURFACE . . . . . . . . 1.35 130 65.0 200 CRMSMC BURIED . . . . . . . . 1.24 35 53.8 65 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 3.36 140 66.7 210 CRMSSC RELIABLE SIDE CHAINS . 3.46 126 67.7 186 CRMSSC SECONDARY STRUCTURE . . 2.24 85 62.5 136 CRMSSC SURFACE . . . . . . . . 3.62 113 67.7 167 CRMSSC BURIED . . . . . . . . 1.90 27 62.8 43 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 2.55 272 64.5 422 CRMSALL SECONDARY STRUCTURE . . 1.77 169 59.5 284 CRMSALL SURFACE . . . . . . . . 2.75 217 66.4 327 CRMSALL BURIED . . . . . . . . 1.57 55 57.9 95 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.147 1.000 0.500 33 62.3 53 ERRCA SECONDARY STRUCTURE . . 1.003 1.000 0.500 21 56.8 37 ERRCA SURFACE . . . . . . . . 1.150 1.000 0.500 26 65.0 40 ERRCA BURIED . . . . . . . . 1.135 1.000 0.500 7 53.8 13 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.141 1.000 0.500 165 62.3 265 ERRMC SECONDARY STRUCTURE . . 1.020 1.000 0.500 105 56.8 185 ERRMC SURFACE . . . . . . . . 1.141 1.000 0.500 130 65.0 200 ERRMC BURIED . . . . . . . . 1.142 1.000 0.500 35 53.8 65 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.594 1.000 0.500 140 66.7 210 ERRSC RELIABLE SIDE CHAINS . 2.667 1.000 0.500 126 67.7 186 ERRSC SECONDARY STRUCTURE . . 1.908 1.000 0.500 85 62.5 136 ERRSC SURFACE . . . . . . . . 2.811 1.000 0.500 113 67.7 167 ERRSC BURIED . . . . . . . . 1.688 1.000 0.500 27 62.8 43 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.856 1.000 0.500 272 64.5 422 ERRALL SECONDARY STRUCTURE . . 1.448 1.000 0.500 169 59.5 284 ERRALL SURFACE . . . . . . . . 1.978 1.000 0.500 217 66.4 327 ERRALL BURIED . . . . . . . . 1.374 1.000 0.500 55 57.9 95 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 17 29 33 33 33 33 53 DISTCA CA (P) 32.08 54.72 62.26 62.26 62.26 53 DISTCA CA (RMS) 0.72 1.05 1.31 1.31 1.31 DISTCA ALL (N) 103 203 232 253 272 272 422 DISTALL ALL (P) 24.41 48.10 54.98 59.95 64.45 422 DISTALL ALL (RMS) 0.73 1.15 1.39 1.77 2.55 DISTALL END of the results output