####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 82 ( 648), selected 82 , name T0589TS253_1-D2 # Molecule2: number of CA atoms 82 ( 644), selected 82 , name T0589-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0589TS253_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 34 199 - 232 4.74 20.53 LONGEST_CONTINUOUS_SEGMENT: 34 200 - 233 4.73 20.73 LCS_AVERAGE: 36.73 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 199 - 218 1.99 19.70 LONGEST_CONTINUOUS_SEGMENT: 20 200 - 219 1.88 20.17 LCS_AVERAGE: 14.44 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 200 - 214 0.70 19.67 LCS_AVERAGE: 10.14 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 82 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT V 189 V 189 3 6 18 3 3 4 4 6 6 7 10 13 17 24 31 34 39 41 44 48 53 56 60 LCS_GDT L 190 L 190 5 6 18 3 5 5 6 6 8 9 10 13 17 24 31 34 39 41 44 48 51 56 60 LCS_GDT T 191 T 191 5 6 26 3 5 5 6 6 8 11 17 21 23 31 32 37 39 41 44 48 53 56 60 LCS_GDT G 192 G 192 5 7 26 3 5 5 7 8 12 14 18 26 27 31 32 37 39 41 44 48 53 56 60 LCS_GDT F 193 F 193 5 7 26 6 8 11 11 13 15 18 22 26 27 31 32 37 39 41 44 48 53 56 60 LCS_GDT F 194 F 194 5 7 26 4 5 6 11 13 15 18 22 26 27 31 32 37 39 41 44 48 51 56 60 LCS_GDT Q 195 Q 195 5 7 26 4 8 11 11 13 14 18 22 26 27 31 32 37 39 41 44 48 53 56 60 LCS_GDT S 196 S 196 5 7 27 4 5 9 11 13 14 18 22 26 27 31 32 37 39 41 44 48 53 56 60 LCS_GDT L 197 L 197 5 7 29 4 5 5 7 11 15 18 22 26 27 31 32 37 39 41 44 48 51 56 60 LCS_GDT N 198 N 198 4 7 31 3 8 9 11 13 14 17 20 26 27 31 32 37 39 41 44 48 53 56 60 LCS_GDT I 199 I 199 4 20 34 3 3 4 4 6 15 18 20 23 25 31 32 37 39 41 44 48 53 56 60 LCS_GDT S 200 S 200 15 20 34 9 14 15 17 18 19 20 22 23 25 27 29 34 37 41 44 48 53 56 60 LCS_GDT E 201 E 201 15 20 34 9 14 15 17 18 19 20 22 23 25 27 29 32 33 35 39 46 53 56 60 LCS_GDT T 202 T 202 15 20 34 9 14 15 17 18 19 20 22 23 25 27 29 32 33 35 36 36 41 45 53 LCS_GDT Q 203 Q 203 15 20 34 9 14 15 17 18 19 20 22 23 25 27 29 32 33 35 39 46 53 56 60 LCS_GDT I 204 I 204 15 20 34 9 14 15 17 18 19 20 22 23 25 27 29 32 33 35 39 46 53 56 60 LCS_GDT K 205 K 205 15 20 34 9 14 15 17 18 19 20 22 23 25 27 29 32 33 35 36 36 37 40 47 LCS_GDT S 206 S 206 15 20 34 9 14 15 17 18 19 20 22 23 25 27 29 32 33 35 36 36 37 39 46 LCS_GDT C 207 C 207 15 20 34 9 14 15 17 18 19 20 22 23 25 27 29 32 33 35 36 45 53 56 60 LCS_GDT I 208 I 208 15 20 34 9 14 15 17 18 19 20 22 23 25 27 29 32 33 35 36 36 37 42 47 LCS_GDT S 209 S 209 15 20 34 9 14 15 17 18 19 20 22 23 25 27 29 32 33 35 36 36 37 39 42 LCS_GDT I 210 I 210 15 20 34 9 14 15 17 18 19 20 22 23 25 27 29 32 33 35 36 36 39 41 47 LCS_GDT I 211 I 211 15 20 34 9 14 15 17 18 19 20 22 23 25 27 29 32 33 35 36 36 39 46 52 LCS_GDT D 212 D 212 15 20 34 7 14 15 17 18 19 20 22 23 25 27 29 32 33 35 36 36 37 41 42 LCS_GDT N 213 N 213 15 20 34 9 14 15 17 18 19 20 22 23 25 27 29 32 33 35 36 36 39 41 45 LCS_GDT L 214 L 214 15 20 34 4 10 15 15 16 19 20 22 23 25 27 29 32 33 35 36 36 44 47 52 LCS_GDT E 215 E 215 6 20 34 4 6 7 8 10 19 20 21 22 25 27 29 32 33 35 36 36 39 41 46 LCS_GDT K 216 K 216 6 20 34 4 12 14 17 18 19 20 22 23 25 27 29 32 33 35 36 36 39 41 45 LCS_GDT I 217 I 217 6 20 34 4 6 15 17 18 19 20 22 23 25 27 29 32 33 35 36 36 39 46 48 LCS_GDT G 218 G 218 6 20 34 9 12 15 17 18 19 20 22 23 25 27 29 30 33 35 39 45 51 56 60 LCS_GDT E 219 E 219 5 20 34 5 5 5 6 8 15 19 22 23 25 26 29 31 32 40 43 47 53 56 60 LCS_GDT A 220 A 220 5 8 34 5 5 6 8 10 17 19 22 23 25 26 29 32 34 40 44 48 53 56 60 LCS_GDT K 221 K 221 5 10 34 5 5 5 13 18 18 20 22 23 25 26 29 32 34 40 44 48 53 56 60 LCS_GDT V 222 V 222 5 10 34 5 5 6 9 11 13 17 19 20 22 26 29 31 34 40 44 48 53 56 60 LCS_GDT K 223 K 223 8 10 34 4 7 8 9 9 11 12 20 21 23 26 29 32 34 40 44 48 53 56 60 LCS_GDT L 224 L 224 8 10 34 6 7 8 9 11 14 20 22 23 25 26 29 32 34 40 44 48 53 56 60 LCS_GDT E 225 E 225 8 10 34 6 7 8 9 9 12 18 22 23 25 26 29 32 34 40 44 48 53 56 60 LCS_GDT L 226 L 226 8 10 34 6 7 8 9 9 12 17 19 20 23 26 29 31 34 40 44 48 53 56 60 LCS_GDT E 227 E 227 8 10 34 6 7 8 9 11 14 17 20 21 25 26 29 32 34 40 44 48 53 56 60 LCS_GDT K 228 K 228 8 10 34 6 7 8 9 9 11 14 18 21 25 26 29 32 34 40 44 48 53 56 60 LCS_GDT E 229 E 229 8 10 34 6 7 8 9 9 10 10 12 12 17 22 25 30 31 36 41 45 53 56 60 LCS_GDT G 230 G 230 8 10 34 5 7 8 9 11 14 17 20 21 21 23 29 31 34 40 44 48 53 56 60 LCS_GDT I 231 I 231 6 9 34 3 4 7 8 11 17 20 22 23 25 26 29 32 37 40 44 48 53 56 60 LCS_GDT N 232 N 232 6 11 34 3 5 7 9 11 14 17 19 20 25 27 32 37 39 41 44 48 53 56 60 LCS_GDT P 233 P 233 6 11 34 4 5 7 9 13 14 17 19 20 25 26 29 37 39 41 44 48 53 56 60 LCS_GDT E 234 E 234 6 11 30 4 5 7 8 11 14 17 19 20 26 29 32 37 39 41 44 48 51 56 59 LCS_GDT Q 235 Q 235 6 11 30 4 5 7 8 11 14 18 21 22 25 29 32 37 39 41 44 48 51 56 60 LCS_GDT T 236 T 236 6 11 30 4 5 7 9 11 14 18 22 22 25 26 29 37 39 41 44 48 53 56 60 LCS_GDT Q 237 Q 237 9 11 30 4 8 11 11 13 14 17 20 21 25 26 32 37 39 41 44 48 53 56 60 LCS_GDT K 238 K 238 9 11 30 4 8 11 11 13 14 17 20 21 26 29 32 37 39 41 44 48 53 56 60 LCS_GDT I 239 I 239 9 11 30 4 8 11 11 13 14 18 20 23 26 31 32 37 39 41 44 48 53 56 60 LCS_GDT I 240 I 240 9 11 30 4 8 11 11 13 15 18 20 23 26 31 32 37 39 41 44 48 53 56 60 LCS_GDT D 241 D 241 9 11 30 6 8 11 11 13 14 17 20 23 26 31 32 37 39 41 44 48 53 56 60 LCS_GDT F 242 F 242 9 11 30 6 8 11 11 13 14 17 22 26 27 31 32 37 39 41 44 48 53 56 60 LCS_GDT V 243 V 243 9 11 30 6 8 11 11 13 15 18 22 26 27 31 32 37 39 41 44 48 53 56 60 LCS_GDT K 244 K 244 9 11 30 6 8 11 11 13 15 18 22 26 27 31 32 37 39 41 44 48 53 56 60 LCS_GDT I 245 I 245 9 11 30 6 8 11 11 13 14 18 22 26 27 31 32 37 39 41 43 47 53 56 60 LCS_GDT D 246 D 246 5 11 30 0 4 6 11 13 15 18 22 26 27 31 32 37 39 41 43 46 52 56 60 LCS_GDT G 247 G 247 3 11 30 0 3 3 8 10 13 18 22 26 27 31 32 37 39 41 43 46 53 56 60 LCS_GDT S 248 S 248 10 11 28 6 7 10 10 10 15 18 22 26 27 28 30 34 36 40 41 44 48 48 50 LCS_GDT V 249 V 249 10 11 28 7 9 10 10 10 10 13 14 17 18 21 23 29 34 35 38 40 41 47 48 LCS_GDT D 250 D 250 10 11 28 7 9 10 10 10 10 13 14 17 23 25 30 31 34 36 39 43 48 48 50 LCS_GDT D 251 D 251 10 11 28 6 9 10 10 10 15 18 22 26 27 31 32 37 39 41 43 44 48 52 59 LCS_GDT V 252 V 252 10 11 28 7 9 10 10 12 12 15 22 26 27 31 31 34 37 40 43 44 48 51 58 LCS_GDT L 253 L 253 10 11 28 6 9 10 10 10 11 15 21 26 27 28 31 34 37 40 43 44 48 48 51 LCS_GDT D 254 D 254 10 11 28 7 9 10 10 10 15 18 22 26 27 31 32 37 39 41 43 46 53 56 60 LCS_GDT K 255 K 255 10 11 28 7 9 10 10 10 10 14 18 25 27 31 32 37 39 41 44 48 53 56 60 LCS_GDT L 256 L 256 10 11 28 7 9 10 10 10 10 12 20 26 27 31 32 37 39 41 43 46 53 56 60 LCS_GDT K 257 K 257 10 11 28 7 9 10 10 12 15 18 22 26 27 31 32 37 39 41 44 48 53 56 60 LCS_GDT H 258 H 258 7 11 28 4 6 6 8 12 15 18 22 26 27 31 32 37 39 41 44 48 53 56 60 LCS_GDT L 259 L 259 7 7 28 4 6 6 8 12 15 18 22 26 27 31 32 37 39 41 44 48 53 56 60 LCS_GDT S 260 S 260 7 7 28 4 6 6 8 12 15 18 22 26 27 31 32 37 39 41 44 48 53 56 60 LCS_GDT Q 261 Q 261 7 7 28 4 6 6 8 12 15 18 22 26 27 31 32 37 39 41 44 48 53 56 60 LCS_GDT T 262 T 262 7 7 28 4 6 6 8 12 15 18 22 26 27 31 32 37 39 41 44 48 53 56 60 LCS_GDT L 263 L 263 7 7 28 4 6 6 9 12 14 18 22 26 27 31 32 37 39 41 44 48 53 56 60 LCS_GDT P 264 P 264 3 5 28 3 3 4 6 11 14 17 20 21 23 25 29 33 37 40 44 48 53 56 60 LCS_GDT E 265 E 265 3 5 28 3 3 7 9 11 14 17 20 21 23 31 31 37 39 41 44 48 53 56 60 LCS_GDT S 266 S 266 5 5 26 3 5 5 5 5 6 8 10 12 20 22 23 26 31 33 38 45 51 56 60 LCS_GDT E 267 E 267 5 5 26 3 5 7 9 11 14 17 20 21 21 23 25 31 32 37 44 48 53 56 60 LCS_GDT Q 268 Q 268 5 5 23 3 5 5 5 5 6 12 13 15 18 20 24 29 34 41 43 48 53 56 60 LCS_GDT F 269 F 269 5 5 14 3 5 5 5 5 6 7 8 10 11 14 16 16 23 28 34 38 44 48 57 LCS_GDT N 270 N 270 5 5 14 3 5 5 5 5 5 6 7 9 11 12 16 16 20 29 34 38 44 45 47 LCS_AVERAGE LCS_A: 20.44 ( 10.14 14.44 36.73 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 14 15 17 18 19 20 22 26 27 31 32 37 39 41 44 48 53 56 60 GDT PERCENT_AT 10.98 17.07 18.29 20.73 21.95 23.17 24.39 26.83 31.71 32.93 37.80 39.02 45.12 47.56 50.00 53.66 58.54 64.63 68.29 73.17 GDT RMS_LOCAL 0.26 0.54 0.70 1.01 1.24 1.45 1.63 2.43 3.30 3.38 4.09 4.21 4.67 4.85 5.16 5.81 6.13 6.93 6.87 7.32 GDT RMS_ALL_AT 20.51 19.88 19.67 20.36 20.44 20.18 20.31 20.66 16.56 16.36 14.92 13.75 13.36 13.49 13.25 11.39 11.27 10.60 10.91 10.57 # Checking swapping # possible swapping detected: F 194 F 194 # possible swapping detected: E 201 E 201 # possible swapping detected: E 225 E 225 # possible swapping detected: E 227 E 227 # possible swapping detected: E 234 E 234 # possible swapping detected: F 242 F 242 # possible swapping detected: D 246 D 246 # possible swapping detected: E 265 E 265 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA V 189 V 189 28.702 0 0.000 0.040 32.261 0.000 0.000 LGA L 190 L 190 26.725 0 0.168 0.737 27.731 0.000 0.000 LGA T 191 T 191 20.991 0 0.097 0.161 22.955 0.000 0.000 LGA G 192 G 192 25.287 0 0.105 0.105 25.287 0.000 0.000 LGA F 193 F 193 26.198 0 0.188 0.557 29.170 0.000 0.000 LGA F 194 F 194 21.796 0 0.000 0.958 23.758 0.000 0.000 LGA Q 195 Q 195 21.802 0 0.035 1.352 25.958 0.000 0.000 LGA S 196 S 196 22.014 0 0.146 0.458 23.020 0.000 0.000 LGA L 197 L 197 18.107 0 0.489 0.454 21.199 0.000 0.000 LGA N 198 N 198 15.062 0 0.368 0.493 20.647 0.000 0.000 LGA I 199 I 199 9.636 0 0.084 1.108 14.494 5.952 2.976 LGA S 200 S 200 2.095 0 0.533 0.958 4.839 60.476 60.794 LGA E 201 E 201 0.962 0 0.052 0.808 4.097 83.690 73.016 LGA T 202 T 202 2.262 0 0.029 1.205 4.681 66.786 65.102 LGA Q 203 Q 203 2.054 0 0.059 0.607 5.299 70.952 59.206 LGA I 204 I 204 0.928 0 0.000 0.085 1.653 83.690 79.345 LGA K 205 K 205 1.998 0 0.034 0.636 4.375 72.976 58.836 LGA S 206 S 206 2.086 0 0.103 0.171 2.378 68.810 67.460 LGA C 207 C 207 0.963 0 0.000 0.108 1.897 88.214 84.524 LGA I 208 I 208 0.851 0 0.044 0.084 2.045 88.214 81.667 LGA S 209 S 209 1.545 0 0.044 0.708 4.239 79.286 69.841 LGA I 210 I 210 1.682 0 0.022 0.232 3.268 77.143 66.310 LGA I 211 I 211 1.691 0 0.053 0.761 3.021 72.976 68.036 LGA D 212 D 212 1.363 0 0.161 0.167 2.814 81.548 72.262 LGA N 213 N 213 1.308 0 0.294 0.263 2.935 79.405 71.131 LGA L 214 L 214 4.024 0 0.133 1.386 10.593 46.786 26.250 LGA E 215 E 215 4.365 0 0.029 1.017 9.836 43.452 24.815 LGA K 216 K 216 2.604 0 0.028 1.291 9.142 60.952 41.376 LGA I 217 I 217 1.302 0 0.077 0.118 3.677 88.214 72.857 LGA G 218 G 218 1.398 0 0.593 0.593 2.521 75.476 75.476 LGA E 219 E 219 5.525 0 0.044 1.099 8.619 23.929 13.651 LGA A 220 A 220 6.787 0 0.129 0.135 7.375 19.524 17.619 LGA K 221 K 221 2.750 0 0.181 0.277 6.903 42.262 44.762 LGA V 222 V 222 7.059 0 0.111 0.260 10.606 13.333 8.231 LGA K 223 K 223 7.815 0 0.338 0.383 13.917 11.905 5.820 LGA L 224 L 224 4.158 0 0.050 0.180 5.178 32.976 35.238 LGA E 225 E 225 4.820 0 0.029 1.187 6.359 25.357 37.196 LGA L 226 L 226 8.092 0 0.070 1.400 12.235 7.024 4.226 LGA E 227 E 227 7.415 0 0.027 0.583 9.053 7.500 7.778 LGA K 228 K 228 6.964 0 0.049 0.822 8.660 9.167 11.481 LGA E 229 E 229 9.222 0 0.215 1.020 14.469 1.667 0.847 LGA G 230 G 230 10.957 0 0.116 0.116 10.957 1.429 1.429 LGA I 231 I 231 4.248 0 0.292 0.700 8.974 41.310 32.321 LGA N 232 N 232 6.192 0 0.363 1.156 9.371 17.976 12.798 LGA P 233 P 233 10.884 0 0.093 0.089 13.228 0.119 0.068 LGA E 234 E 234 14.772 0 0.007 1.145 21.078 0.000 0.000 LGA Q 235 Q 235 11.834 0 0.069 0.312 12.864 0.000 1.587 LGA T 236 T 236 9.343 0 0.037 0.077 11.788 0.476 7.347 LGA Q 237 Q 237 14.434 0 0.267 1.440 18.613 0.000 0.000 LGA K 238 K 238 18.875 0 0.028 1.195 28.060 0.000 0.000 LGA I 239 I 239 16.135 0 0.105 0.148 18.234 0.000 0.000 LGA I 240 I 240 15.322 0 0.090 0.676 19.347 0.000 0.060 LGA D 241 D 241 22.022 0 0.050 0.813 26.413 0.000 0.000 LGA F 242 F 242 24.788 0 0.000 1.448 28.746 0.000 0.000 LGA V 243 V 243 23.114 0 0.159 1.194 25.414 0.000 0.000 LGA K 244 K 244 23.678 0 0.134 0.616 27.360 0.000 0.000 LGA I 245 I 245 30.391 0 0.628 1.198 33.664 0.000 0.000 LGA D 246 D 246 31.547 0 0.513 1.136 33.100 0.000 0.000 LGA G 247 G 247 36.170 0 0.492 0.492 36.170 0.000 0.000 LGA S 248 S 248 36.119 0 0.603 0.940 38.444 0.000 0.000 LGA V 249 V 249 34.487 0 0.034 1.333 35.607 0.000 0.000 LGA D 250 D 250 39.315 0 0.054 0.921 45.244 0.000 0.000 LGA D 251 D 251 37.782 0 0.065 0.078 42.374 0.000 0.000 LGA V 252 V 252 30.823 0 0.090 0.115 33.262 0.000 0.000 LGA L 253 L 253 32.959 0 0.018 0.102 35.214 0.000 0.000 LGA D 254 D 254 38.421 0 0.129 0.311 42.793 0.000 0.000 LGA K 255 K 255 34.096 0 0.147 1.255 35.267 0.000 0.000 LGA L 256 L 256 29.403 0 0.061 0.206 31.103 0.000 0.000 LGA K 257 K 257 34.925 0 0.431 2.037 39.269 0.000 0.000 LGA H 258 H 258 32.806 0 0.227 0.252 33.377 0.000 0.000 LGA L 259 L 259 29.881 0 0.213 0.269 30.605 0.000 0.000 LGA S 260 S 260 32.530 0 0.035 0.472 34.898 0.000 0.000 LGA Q 261 Q 261 33.465 0 0.086 1.097 36.191 0.000 0.000 LGA T 262 T 262 29.344 0 0.000 0.110 30.707 0.000 0.000 LGA L 263 L 263 28.062 0 0.541 1.040 28.669 0.000 0.000 LGA P 264 P 264 25.836 0 0.253 0.345 29.681 0.000 0.000 LGA E 265 E 265 22.772 0 0.520 1.082 24.081 0.000 0.000 LGA S 266 S 266 18.044 0 0.572 0.720 20.681 0.000 0.000 LGA E 267 E 267 20.778 4 0.062 0.074 23.337 0.000 0.000 LGA Q 268 Q 268 20.971 0 0.280 0.432 23.415 0.000 0.000 LGA F 269 F 269 24.445 0 0.151 0.156 30.091 0.000 0.000 LGA N 270 N 270 28.740 0 0.074 1.446 31.286 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 82 328 328 100.00 644 644 100.00 82 SUMMARY(RMSD_GDC): 9.933 9.773 11.018 20.134 17.850 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 82 82 4.0 22 2.43 29.573 25.594 0.870 LGA_LOCAL RMSD: 2.430 Number of atoms: 22 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 20.663 Number of assigned atoms: 82 Std_ASGN_ATOMS RMSD: 9.933 Standard rmsd on all 82 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.907038 * X + -0.238189 * Y + -0.347201 * Z + 65.284897 Y_new = -0.178916 * X + -0.964495 * Y + 0.194264 * Z + -6.668264 Z_new = -0.381145 * X + -0.114085 * Y + -0.917449 * Z + 171.357056 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.194753 0.391035 -3.017877 [DEG: -11.1585 22.4046 -172.9116 ] ZXZ: -2.080916 2.732417 -1.861631 [DEG: -119.2277 156.5560 -106.6636 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0589TS253_1-D2 REMARK 2: T0589-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0589TS253_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 82 82 4.0 22 2.43 25.594 9.93 REMARK ---------------------------------------------------------- MOLECULE T0589TS253_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0589 REMARK MODEL 1 REMARK PARENT 1h4v_B 1kmm_A 3hri_A 1qe0_A 1wu7_A ATOM 3026 N VAL 189 33.224 2.898 201.448 1.00 0.50 N ATOM 3027 CA VAL 189 34.494 3.223 202.086 1.00 0.50 C ATOM 3028 C VAL 189 35.650 3.110 201.101 1.00 0.50 C ATOM 3029 O VAL 189 36.472 4.021 200.986 1.00 0.50 O ATOM 3030 CB VAL 189 34.764 2.306 203.299 1.00 0.50 C ATOM 3031 CG1 VAL 189 36.171 2.527 203.842 1.00 0.50 C ATOM 3032 CG2 VAL 189 33.732 2.556 204.394 1.00 0.50 C ATOM 3042 N LEU 190 35.711 1.988 200.393 1.00 0.50 N ATOM 3043 CA LEU 190 36.768 1.754 199.417 1.00 0.50 C ATOM 3044 C LEU 190 36.736 2.800 198.311 1.00 0.50 C ATOM 3045 O LEU 190 37.758 3.089 197.686 1.00 0.50 O ATOM 3046 CB LEU 190 36.628 0.354 198.808 1.00 0.50 C ATOM 3047 CG LEU 190 37.928 -0.326 198.368 1.00 0.50 C ATOM 3048 CD1 LEU 190 38.914 0.712 197.852 1.00 0.50 C ATOM 3049 CD2 LEU 190 38.531 -1.102 199.531 1.00 0.50 C ATOM 3061 N THR 191 35.558 3.365 198.070 1.00 0.50 N ATOM 3062 CA THR 191 35.392 4.381 197.037 1.00 0.50 C ATOM 3063 C THR 191 36.664 5.198 196.858 1.00 0.50 C ATOM 3064 O THR 191 36.909 5.756 195.789 1.00 0.50 O ATOM 3065 CB THR 191 34.220 5.330 197.374 1.00 0.50 C ATOM 3066 OG1 THR 191 33.111 4.549 197.835 1.00 0.50 O ATOM 3067 CG2 THR 191 33.796 6.134 196.152 1.00 0.50 C ATOM 3075 N GLY 192 37.471 5.266 197.912 1.00 0.50 N ATOM 3076 CA GLY 192 38.721 6.015 197.872 1.00 0.50 C ATOM 3077 C GLY 192 39.423 5.846 196.532 1.00 0.50 C ATOM 3078 O GLY 192 39.599 6.809 195.786 1.00 0.50 O ATOM 3082 N PHE 193 39.824 4.615 196.230 1.00 0.50 N ATOM 3083 CA PHE 193 40.508 4.317 194.979 1.00 0.50 C ATOM 3084 C PHE 193 39.516 4.145 193.835 1.00 0.50 C ATOM 3085 O PHE 193 39.287 5.069 193.055 1.00 0.50 O ATOM 3086 CB PHE 193 41.361 3.048 195.121 1.00 0.50 C ATOM 3087 CG PHE 193 42.216 2.756 193.914 1.00 0.50 C ATOM 3088 CD1 PHE 193 42.542 3.764 193.015 1.00 0.50 C ATOM 3089 CD2 PHE 193 42.692 1.469 193.683 1.00 0.50 C ATOM 3090 CE1 PHE 193 43.331 3.496 191.899 1.00 0.50 C ATOM 3091 CE2 PHE 193 43.481 1.191 192.570 1.00 0.50 C ATOM 3092 CZ PHE 193 43.800 2.207 191.678 1.00 0.50 C ATOM 3102 N PHE 194 38.930 2.956 193.741 1.00 0.50 N ATOM 3103 CA PHE 194 37.961 2.661 192.693 1.00 0.50 C ATOM 3104 C PHE 194 36.537 2.903 193.175 1.00 0.50 C ATOM 3105 O PHE 194 35.704 3.434 192.442 1.00 0.50 O ATOM 3106 CB PHE 194 38.108 1.209 192.218 1.00 0.50 C ATOM 3107 CG PHE 194 39.361 0.957 191.418 1.00 0.50 C ATOM 3108 CD1 PHE 194 40.195 2.008 191.058 1.00 0.50 C ATOM 3109 CD2 PHE 194 39.700 -0.334 191.027 1.00 0.50 C ATOM 3110 CE1 PHE 194 41.353 1.779 190.319 1.00 0.50 C ATOM 3111 CE2 PHE 194 40.856 -0.574 190.288 1.00 0.50 C ATOM 3112 CZ PHE 194 41.681 0.485 189.934 1.00 0.50 C ATOM 3122 N GLN 195 36.262 2.507 194.413 1.00 0.50 N ATOM 3123 CA GLN 195 34.937 2.679 194.997 1.00 0.50 C ATOM 3124 C GLN 195 34.384 4.068 194.707 1.00 0.50 C ATOM 3125 O GLN 195 33.196 4.228 194.426 1.00 0.50 O ATOM 3126 CB GLN 195 34.983 2.444 196.510 1.00 0.50 C ATOM 3127 CG GLN 195 35.255 0.994 196.893 1.00 0.50 C ATOM 3128 CD GLN 195 34.151 0.054 196.446 1.00 0.50 C ATOM 3129 OE1 GLN 195 32.964 0.320 196.663 1.00 0.50 O ATOM 3130 NE2 GLN 195 34.528 -1.057 195.823 1.00 0.50 N ATOM 3139 N SER 196 35.252 5.072 194.778 1.00 0.50 N ATOM 3140 CA SER 196 34.852 6.450 194.523 1.00 0.50 C ATOM 3141 C SER 196 33.884 6.536 193.350 1.00 0.50 C ATOM 3142 O SER 196 32.861 7.215 193.425 1.00 0.50 O ATOM 3143 CB SER 196 36.080 7.320 194.245 1.00 0.50 C ATOM 3144 OG SER 196 35.687 8.615 193.822 1.00 0.50 O ATOM 3150 N LEU 197 34.215 5.842 192.266 1.00 0.50 N ATOM 3151 CA LEU 197 33.376 5.838 191.073 1.00 0.50 C ATOM 3152 C LEU 197 32.088 6.618 191.304 1.00 0.50 C ATOM 3153 O LEU 197 32.103 7.846 191.402 1.00 0.50 O ATOM 3154 CB LEU 197 33.042 4.399 190.663 1.00 0.50 C ATOM 3155 CG LEU 197 34.223 3.529 190.222 1.00 0.50 C ATOM 3156 CD1 LEU 197 33.759 2.100 189.978 1.00 0.50 C ATOM 3157 CD2 LEU 197 34.856 4.106 188.962 1.00 0.50 C ATOM 3169 N ASN 198 30.973 5.900 191.387 1.00 0.50 N ATOM 3170 CA ASN 198 29.674 6.524 191.605 1.00 0.50 C ATOM 3171 C ASN 198 29.141 7.150 190.323 1.00 0.50 C ATOM 3172 O ASN 198 29.474 8.288 189.991 1.00 0.50 O ATOM 3173 CB ASN 198 29.769 7.581 192.711 1.00 0.50 C ATOM 3174 CG ASN 198 30.076 6.977 194.068 1.00 0.50 C ATOM 3175 OD1 ASN 198 29.749 5.815 194.332 1.00 0.50 O ATOM 3176 ND2 ASN 198 30.705 7.754 194.941 1.00 0.50 N ATOM 3183 N ILE 199 28.313 6.399 189.604 1.00 0.50 N ATOM 3184 CA ILE 199 27.732 6.880 188.356 1.00 0.50 C ATOM 3185 C ILE 199 28.153 8.316 188.069 1.00 0.50 C ATOM 3186 O ILE 199 28.806 8.957 188.891 1.00 0.50 O ATOM 3187 CB ILE 199 26.188 6.795 188.389 1.00 0.50 C ATOM 3188 CG1 ILE 199 25.737 5.330 188.431 1.00 0.50 C ATOM 3189 CG2 ILE 199 25.581 7.514 187.183 1.00 0.50 C ATOM 3190 CD1 ILE 199 24.350 5.132 189.023 1.00 0.50 C ATOM 3202 N SER 200 27.778 8.813 186.896 1.00 0.50 N ATOM 3203 CA SER 200 28.116 10.175 186.497 1.00 0.50 C ATOM 3204 C SER 200 27.623 11.187 187.523 1.00 0.50 C ATOM 3205 O SER 200 28.402 11.986 188.044 1.00 0.50 O ATOM 3206 CB SER 200 27.515 10.493 185.125 1.00 0.50 C ATOM 3207 OG SER 200 28.124 9.699 184.120 1.00 0.50 O ATOM 3213 N GLU 201 26.326 11.150 187.809 1.00 0.50 N ATOM 3214 CA GLU 201 25.727 12.065 188.773 1.00 0.50 C ATOM 3215 C GLU 201 26.588 12.188 190.025 1.00 0.50 C ATOM 3216 O GLU 201 26.903 13.293 190.467 1.00 0.50 O ATOM 3217 CB GLU 201 24.320 11.595 189.155 1.00 0.50 C ATOM 3218 CG GLU 201 23.564 10.932 188.011 1.00 0.50 C ATOM 3219 CD GLU 201 23.781 9.432 187.936 1.00 0.50 C ATOM 3220 OE1 GLU 201 23.422 8.713 188.893 1.00 0.50 O ATOM 3221 OE2 GLU 201 24.330 8.969 186.907 1.00 0.50 O ATOM 3228 N THR 202 26.966 11.047 190.591 1.00 0.50 N ATOM 3229 CA THR 202 27.792 11.025 191.793 1.00 0.50 C ATOM 3230 C THR 202 29.082 11.808 191.588 1.00 0.50 C ATOM 3231 O THR 202 29.533 12.525 192.482 1.00 0.50 O ATOM 3232 CB THR 202 28.135 9.577 192.206 1.00 0.50 C ATOM 3233 OG1 THR 202 28.935 8.980 191.177 1.00 0.50 O ATOM 3234 CG2 THR 202 26.873 8.747 192.404 1.00 0.50 C ATOM 3242 N GLN 203 29.676 11.664 190.408 1.00 0.50 N ATOM 3243 CA GLN 203 30.916 12.358 190.084 1.00 0.50 C ATOM 3244 C GLN 203 30.704 13.865 190.019 1.00 0.50 C ATOM 3245 O GLN 203 31.446 14.633 190.631 1.00 0.50 O ATOM 3246 CB GLN 203 31.479 11.855 188.751 1.00 0.50 C ATOM 3247 CG GLN 203 32.024 10.434 188.818 1.00 0.50 C ATOM 3248 CD GLN 203 32.380 9.879 187.451 1.00 0.50 C ATOM 3249 OE1 GLN 203 32.318 10.589 186.441 1.00 0.50 O ATOM 3250 NE2 GLN 203 32.753 8.604 187.401 1.00 0.50 N ATOM 3259 N ILE 204 29.688 14.283 189.271 1.00 0.50 N ATOM 3260 CA ILE 204 29.376 15.699 189.123 1.00 0.50 C ATOM 3261 C ILE 204 29.322 16.395 190.477 1.00 0.50 C ATOM 3262 O ILE 204 30.022 17.381 190.708 1.00 0.50 O ATOM 3263 CB ILE 204 28.030 15.901 188.387 1.00 0.50 C ATOM 3264 CG1 ILE 204 28.140 15.416 186.937 1.00 0.50 C ATOM 3265 CG2 ILE 204 27.602 17.368 188.436 1.00 0.50 C ATOM 3266 CD1 ILE 204 26.802 15.311 186.222 1.00 0.50 C ATOM 3278 N LYS 205 28.485 15.876 191.370 1.00 0.50 N ATOM 3279 CA LYS 205 28.338 16.447 192.704 1.00 0.50 C ATOM 3280 C LYS 205 29.669 16.473 193.443 1.00 0.50 C ATOM 3281 O LYS 205 29.995 17.447 194.121 1.00 0.50 O ATOM 3282 CB LYS 205 27.310 15.654 193.515 1.00 0.50 C ATOM 3283 CG LYS 205 25.879 15.826 193.029 1.00 0.50 C ATOM 3284 CD LYS 205 24.904 15.013 193.870 1.00 0.50 C ATOM 3285 CE LYS 205 23.472 15.161 193.373 1.00 0.50 C ATOM 3286 NZ LYS 205 22.521 14.337 194.174 1.00 0.50 N ATOM 3300 N SER 206 30.435 15.396 193.308 1.00 0.50 N ATOM 3301 CA SER 206 31.734 15.292 193.963 1.00 0.50 C ATOM 3302 C SER 206 32.684 16.381 193.479 1.00 0.50 C ATOM 3303 O SER 206 33.354 17.033 194.278 1.00 0.50 O ATOM 3304 CB SER 206 32.352 13.914 193.708 1.00 0.50 C ATOM 3305 OG SER 206 32.603 13.731 192.324 1.00 0.50 O ATOM 3311 N CYS 207 32.737 16.570 192.165 1.00 0.50 N ATOM 3312 CA CYS 207 33.604 17.580 191.571 1.00 0.50 C ATOM 3313 C CYS 207 33.372 18.946 192.203 1.00 0.50 C ATOM 3314 O CYS 207 34.321 19.646 192.558 1.00 0.50 O ATOM 3315 CB CYS 207 33.368 17.665 190.058 1.00 0.50 C ATOM 3316 SG CYS 207 33.942 16.206 189.152 1.00 0.50 S ATOM 3322 N ILE 208 32.105 19.322 192.339 1.00 0.50 N ATOM 3323 CA ILE 208 31.746 20.607 192.929 1.00 0.50 C ATOM 3324 C ILE 208 32.378 20.777 194.304 1.00 0.50 C ATOM 3325 O ILE 208 32.939 21.828 194.613 1.00 0.50 O ATOM 3326 CB ILE 208 30.211 20.757 193.047 1.00 0.50 C ATOM 3327 CG1 ILE 208 29.578 20.855 191.654 1.00 0.50 C ATOM 3328 CG2 ILE 208 29.852 21.982 193.891 1.00 0.50 C ATOM 3329 CD1 ILE 208 28.063 20.733 191.660 1.00 0.50 C ATOM 3341 N SER 209 32.281 19.739 195.127 1.00 0.50 N ATOM 3342 CA SER 209 32.844 19.772 196.472 1.00 0.50 C ATOM 3343 C SER 209 34.362 19.896 196.431 1.00 0.50 C ATOM 3344 O SER 209 34.951 20.677 197.180 1.00 0.50 O ATOM 3345 CB SER 209 32.448 18.514 197.247 1.00 0.50 C ATOM 3346 OG SER 209 31.038 18.432 197.376 1.00 0.50 O ATOM 3352 N ILE 210 34.990 19.121 195.554 1.00 0.50 N ATOM 3353 CA ILE 210 36.442 19.143 195.414 1.00 0.50 C ATOM 3354 C ILE 210 36.936 20.525 195.009 1.00 0.50 C ATOM 3355 O ILE 210 37.957 21.000 195.506 1.00 0.50 O ATOM 3356 CB ILE 210 36.919 18.101 194.375 1.00 0.50 C ATOM 3357 CG1 ILE 210 36.384 16.710 194.732 1.00 0.50 C ATOM 3358 CG2 ILE 210 38.446 18.087 194.285 1.00 0.50 C ATOM 3359 CD1 ILE 210 36.701 15.645 193.693 1.00 0.50 C ATOM 3371 N ILE 211 36.206 21.167 194.104 1.00 0.50 N ATOM 3372 CA ILE 211 36.568 22.497 193.629 1.00 0.50 C ATOM 3373 C ILE 211 36.525 23.516 194.760 1.00 0.50 C ATOM 3374 O ILE 211 37.421 24.350 194.892 1.00 0.50 O ATOM 3375 CB ILE 211 35.632 22.957 192.486 1.00 0.50 C ATOM 3376 CG1 ILE 211 35.703 21.973 191.312 1.00 0.50 C ATOM 3377 CG2 ILE 211 35.992 24.372 192.029 1.00 0.50 C ATOM 3378 CD1 ILE 211 34.712 22.275 190.199 1.00 0.50 C ATOM 3390 N ASP 212 35.476 23.445 195.573 1.00 0.50 N ATOM 3391 CA ASP 212 35.313 24.362 196.695 1.00 0.50 C ATOM 3392 C ASP 212 36.508 24.297 197.638 1.00 0.50 C ATOM 3393 O ASP 212 37.072 25.326 198.011 1.00 0.50 O ATOM 3394 CB ASP 212 34.025 24.044 197.461 1.00 0.50 C ATOM 3395 CG ASP 212 33.699 25.069 198.531 1.00 0.50 C ATOM 3396 OD1 ASP 212 33.643 26.278 198.226 1.00 0.50 O ATOM 3397 OD2 ASP 212 33.501 24.656 199.697 1.00 0.50 O ATOM 3402 N ASN 213 36.888 23.083 198.020 1.00 0.50 N ATOM 3403 CA ASN 213 38.017 22.882 198.921 1.00 0.50 C ATOM 3404 C ASN 213 39.335 23.208 198.232 1.00 0.50 C ATOM 3405 O ASN 213 40.147 23.975 198.754 1.00 0.50 O ATOM 3406 CB ASN 213 38.034 21.442 199.443 1.00 0.50 C ATOM 3407 CG ASN 213 36.891 21.157 200.399 1.00 0.50 C ATOM 3408 OD1 ASN 213 36.286 22.079 200.954 1.00 0.50 O ATOM 3409 ND2 ASN 213 36.586 19.881 200.602 1.00 0.50 N ATOM 3416 N LEU 214 39.546 22.622 197.059 1.00 0.50 N ATOM 3417 CA LEU 214 40.767 22.849 196.297 1.00 0.50 C ATOM 3418 C LEU 214 40.816 24.268 195.745 1.00 0.50 C ATOM 3419 O LEU 214 41.890 24.788 195.436 1.00 0.50 O ATOM 3420 CB LEU 214 40.870 21.843 195.144 1.00 0.50 C ATOM 3421 CG LEU 214 41.027 20.373 195.542 1.00 0.50 C ATOM 3422 CD1 LEU 214 40.946 19.484 194.309 1.00 0.50 C ATOM 3423 CD2 LEU 214 42.351 20.164 196.264 1.00 0.50 C ATOM 3435 N GLU 215 39.649 24.890 195.621 1.00 0.50 N ATOM 3436 CA GLU 215 39.557 26.251 195.106 1.00 0.50 C ATOM 3437 C GLU 215 40.338 27.225 195.980 1.00 0.50 C ATOM 3438 O GLU 215 40.911 28.196 195.484 1.00 0.50 O ATOM 3439 CB GLU 215 38.091 26.691 195.017 1.00 0.50 C ATOM 3440 CG GLU 215 37.846 27.810 194.013 1.00 0.50 C ATOM 3441 CD GLU 215 37.874 27.338 192.570 1.00 0.50 C ATOM 3442 OE1 GLU 215 36.864 26.782 192.088 1.00 0.50 O ATOM 3443 OE2 GLU 215 38.929 27.520 191.914 1.00 0.50 O ATOM 3450 N LYS 216 40.355 26.960 197.282 1.00 0.50 N ATOM 3451 CA LYS 216 41.065 27.813 198.227 1.00 0.50 C ATOM 3452 C LYS 216 42.573 27.681 198.063 1.00 0.50 C ATOM 3453 O LYS 216 43.285 28.679 197.948 1.00 0.50 O ATOM 3454 CB LYS 216 40.667 27.467 199.664 1.00 0.50 C ATOM 3455 CG LYS 216 39.237 27.850 200.015 1.00 0.50 C ATOM 3456 CD LYS 216 38.896 27.473 201.451 1.00 0.50 C ATOM 3457 CE LYS 216 37.526 27.998 201.861 1.00 0.50 C ATOM 3458 NZ LYS 216 36.451 27.508 200.952 1.00 0.50 N ATOM 3472 N ILE 217 43.056 26.443 198.053 1.00 0.50 N ATOM 3473 CA ILE 217 44.482 26.179 197.903 1.00 0.50 C ATOM 3474 C ILE 217 44.884 26.140 196.435 1.00 0.50 C ATOM 3475 O ILE 217 46.051 25.929 196.106 1.00 0.50 O ATOM 3476 CB ILE 217 44.875 24.844 198.579 1.00 0.50 C ATOM 3477 CG1 ILE 217 44.108 23.679 197.944 1.00 0.50 C ATOM 3478 CG2 ILE 217 44.617 24.905 200.086 1.00 0.50 C ATOM 3479 CD1 ILE 217 44.429 22.325 198.559 1.00 0.50 C ATOM 3491 N GLY 218 43.909 26.344 195.554 1.00 0.50 N ATOM 3492 CA GLY 218 44.160 26.334 194.118 1.00 0.50 C ATOM 3493 C GLY 218 45.596 26.732 193.807 1.00 0.50 C ATOM 3494 O GLY 218 46.207 26.210 192.874 1.00 0.50 O ATOM 3498 N GLU 219 46.130 27.663 194.591 1.00 0.50 N ATOM 3499 CA GLU 219 47.497 28.135 194.399 1.00 0.50 C ATOM 3500 C GLU 219 48.496 26.993 194.526 1.00 0.50 C ATOM 3501 O GLU 219 49.525 26.979 193.851 1.00 0.50 O ATOM 3502 CB GLU 219 47.830 29.232 195.415 1.00 0.50 C ATOM 3503 CG GLU 219 47.252 28.982 196.801 1.00 0.50 C ATOM 3504 CD GLU 219 45.886 29.614 197.004 1.00 0.50 C ATOM 3505 OE1 GLU 219 44.920 29.216 196.317 1.00 0.50 O ATOM 3506 OE2 GLU 219 45.783 30.528 197.858 1.00 0.50 O ATOM 3513 N ALA 220 48.187 26.035 195.394 1.00 0.50 N ATOM 3514 CA ALA 220 49.058 24.886 195.610 1.00 0.50 C ATOM 3515 C ALA 220 49.263 24.100 194.322 1.00 0.50 C ATOM 3516 O ALA 220 50.334 24.150 193.717 1.00 0.50 O ATOM 3517 CB ALA 220 48.474 23.978 196.688 1.00 0.50 C ATOM 3523 N LYS 221 48.231 23.374 193.907 1.00 0.50 N ATOM 3524 CA LYS 221 48.296 22.575 192.688 1.00 0.50 C ATOM 3525 C LYS 221 48.399 23.461 191.454 1.00 0.50 C ATOM 3526 O LYS 221 48.524 22.967 190.333 1.00 0.50 O ATOM 3527 CB LYS 221 47.066 21.670 192.576 1.00 0.50 C ATOM 3528 CG LYS 221 47.002 20.586 193.641 1.00 0.50 C ATOM 3529 CD LYS 221 45.765 19.714 193.473 1.00 0.50 C ATOM 3530 CE LYS 221 45.701 18.617 194.531 1.00 0.50 C ATOM 3531 NZ LYS 221 44.485 17.770 194.374 1.00 0.50 N ATOM 3545 N VAL 222 48.346 24.772 191.666 1.00 0.50 N ATOM 3546 CA VAL 222 48.433 25.729 190.570 1.00 0.50 C ATOM 3547 C VAL 222 48.781 25.036 189.259 1.00 0.50 C ATOM 3548 O VAL 222 47.957 24.960 188.348 1.00 0.50 O ATOM 3549 CB VAL 222 49.482 26.825 190.864 1.00 0.50 C ATOM 3550 CG1 VAL 222 49.499 27.869 189.753 1.00 0.50 C ATOM 3551 CG2 VAL 222 49.196 27.488 192.206 1.00 0.50 C ATOM 3561 N LYS 223 50.008 24.532 189.169 1.00 0.50 N ATOM 3562 CA LYS 223 50.467 23.844 187.969 1.00 0.50 C ATOM 3563 C LYS 223 49.295 23.287 187.171 1.00 0.50 C ATOM 3564 O LYS 223 48.468 24.038 186.656 1.00 0.50 O ATOM 3565 CB LYS 223 51.430 22.713 188.337 1.00 0.50 C ATOM 3566 CG LYS 223 52.750 23.194 188.920 1.00 0.50 C ATOM 3567 CD LYS 223 53.670 22.027 189.253 1.00 0.50 C ATOM 3568 CE LYS 223 54.988 22.502 189.853 1.00 0.50 C ATOM 3569 NZ LYS 223 55.886 21.360 190.189 1.00 0.50 N ATOM 3583 N LEU 224 49.232 21.962 187.071 1.00 0.50 N ATOM 3584 CA LEU 224 48.161 21.301 186.335 1.00 0.50 C ATOM 3585 C LEU 224 46.877 21.256 187.154 1.00 0.50 C ATOM 3586 O LEU 224 45.780 21.383 186.611 1.00 0.50 O ATOM 3587 CB LEU 224 48.580 19.877 185.953 1.00 0.50 C ATOM 3588 CG LEU 224 49.948 19.731 185.281 1.00 0.50 C ATOM 3589 CD1 LEU 224 50.174 18.284 184.861 1.00 0.50 C ATOM 3590 CD2 LEU 224 50.041 20.657 184.076 1.00 0.50 C ATOM 3602 N GLU 225 47.021 21.072 188.462 1.00 0.50 N ATOM 3603 CA GLU 225 45.872 21.009 189.358 1.00 0.50 C ATOM 3604 C GLU 225 44.945 22.201 189.149 1.00 0.50 C ATOM 3605 O GLU 225 43.723 22.057 189.161 1.00 0.50 O ATOM 3606 CB GLU 225 46.334 20.959 190.817 1.00 0.50 C ATOM 3607 CG GLU 225 45.941 19.679 191.543 1.00 0.50 C ATOM 3608 CD GLU 225 44.457 19.594 191.849 1.00 0.50 C ATOM 3609 OE1 GLU 225 43.942 20.435 192.619 1.00 0.50 O ATOM 3610 OE2 GLU 225 43.800 18.666 191.319 1.00 0.50 O ATOM 3617 N LEU 226 45.535 23.375 188.960 1.00 0.50 N ATOM 3618 CA LEU 226 44.763 24.595 188.748 1.00 0.50 C ATOM 3619 C LEU 226 43.789 24.435 187.588 1.00 0.50 C ATOM 3620 O LEU 226 42.581 24.616 187.749 1.00 0.50 O ATOM 3621 CB LEU 226 45.701 25.776 188.477 1.00 0.50 C ATOM 3622 CG LEU 226 45.029 27.120 188.180 1.00 0.50 C ATOM 3623 CD1 LEU 226 44.220 27.579 189.386 1.00 0.50 C ATOM 3624 CD2 LEU 226 46.079 28.161 187.815 1.00 0.50 C ATOM 3636 N GLU 227 44.319 24.096 186.418 1.00 0.50 N ATOM 3637 CA GLU 227 43.497 23.911 185.229 1.00 0.50 C ATOM 3638 C GLU 227 42.482 22.792 185.428 1.00 0.50 C ATOM 3639 O GLU 227 41.326 22.911 185.024 1.00 0.50 O ATOM 3640 CB GLU 227 44.376 23.604 184.012 1.00 0.50 C ATOM 3641 CG GLU 227 45.123 24.817 183.474 1.00 0.50 C ATOM 3642 CD GLU 227 45.945 24.512 182.234 1.00 0.50 C ATOM 3643 OE1 GLU 227 46.961 23.791 182.334 1.00 0.50 O ATOM 3644 OE2 GLU 227 45.572 25.013 181.145 1.00 0.50 O ATOM 3651 N LYS 228 42.923 21.705 186.052 1.00 0.50 N ATOM 3652 CA LYS 228 42.054 20.562 186.307 1.00 0.50 C ATOM 3653 C LYS 228 40.854 20.961 187.155 1.00 0.50 C ATOM 3654 O LYS 228 39.775 20.381 187.032 1.00 0.50 O ATOM 3655 CB LYS 228 42.833 19.443 187.003 1.00 0.50 C ATOM 3656 CG LYS 228 43.867 18.770 186.115 1.00 0.50 C ATOM 3657 CD LYS 228 43.209 18.000 184.978 1.00 0.50 C ATOM 3658 CE LYS 228 44.237 17.282 184.112 1.00 0.50 C ATOM 3659 NZ LYS 228 43.599 16.588 182.957 1.00 0.50 N ATOM 3673 N GLU 229 41.049 21.953 188.017 1.00 0.50 N ATOM 3674 CA GLU 229 39.981 22.431 188.889 1.00 0.50 C ATOM 3675 C GLU 229 38.760 22.853 188.082 1.00 0.50 C ATOM 3676 O GLU 229 37.623 22.695 188.530 1.00 0.50 O ATOM 3677 CB GLU 229 40.472 23.605 189.742 1.00 0.50 C ATOM 3678 CG GLU 229 41.472 23.205 190.818 1.00 0.50 C ATOM 3679 CD GLU 229 42.046 24.390 191.575 1.00 0.50 C ATOM 3680 OE1 GLU 229 41.730 25.549 191.227 1.00 0.50 O ATOM 3681 OE2 GLU 229 42.830 24.156 192.526 1.00 0.50 O ATOM 3688 N GLY 230 39.000 23.392 186.892 1.00 0.50 N ATOM 3689 CA GLY 230 37.919 23.839 186.021 1.00 0.50 C ATOM 3690 C GLY 230 37.602 22.796 184.957 1.00 0.50 C ATOM 3691 O GLY 230 36.509 22.785 184.392 1.00 0.50 O ATOM 3695 N ILE 231 38.565 21.921 184.688 1.00 0.50 N ATOM 3696 CA ILE 231 38.390 20.873 183.690 1.00 0.50 C ATOM 3697 C ILE 231 38.180 19.515 184.350 1.00 0.50 C ATOM 3698 O ILE 231 39.004 18.613 184.211 1.00 0.50 O ATOM 3699 CB ILE 231 39.607 20.799 182.738 1.00 0.50 C ATOM 3700 CG1 ILE 231 39.798 22.137 182.015 1.00 0.50 C ATOM 3701 CG2 ILE 231 39.437 19.660 181.732 1.00 0.50 C ATOM 3702 CD1 ILE 231 40.948 22.138 181.019 1.00 0.50 C ATOM 3714 N ASN 232 37.071 19.378 185.070 1.00 0.50 N ATOM 3715 CA ASN 232 36.750 18.131 185.753 1.00 0.50 C ATOM 3716 C ASN 232 37.450 18.048 187.104 1.00 0.50 C ATOM 3717 O ASN 232 38.511 17.435 187.227 1.00 0.50 O ATOM 3718 CB ASN 232 37.135 16.931 184.882 1.00 0.50 C ATOM 3719 CG ASN 232 36.667 15.612 185.471 1.00 0.50 C ATOM 3720 OD1 ASN 232 36.999 14.538 184.959 1.00 0.50 O ATOM 3721 ND2 ASN 232 35.896 15.679 186.547 1.00 0.50 N ATOM 3728 N PRO 233 36.851 18.667 188.115 1.00 0.50 N ATOM 3729 CA PRO 233 37.415 18.664 189.459 1.00 0.50 C ATOM 3730 C PRO 233 37.799 17.256 189.892 1.00 0.50 C ATOM 3731 O PRO 233 38.908 17.023 190.373 1.00 0.50 O ATOM 3732 CB PRO 233 36.294 19.244 190.323 1.00 0.50 C ATOM 3733 CG PRO 233 35.644 20.265 189.435 1.00 0.50 C ATOM 3734 CD PRO 233 35.500 19.568 188.100 1.00 0.50 C ATOM 3742 N GLU 234 36.873 16.317 189.721 1.00 0.50 N ATOM 3743 CA GLU 234 37.113 14.928 190.095 1.00 0.50 C ATOM 3744 C GLU 234 38.573 14.547 189.893 1.00 0.50 C ATOM 3745 O GLU 234 39.202 13.969 190.779 1.00 0.50 O ATOM 3746 CB GLU 234 36.214 13.993 189.280 1.00 0.50 C ATOM 3747 CG GLU 234 36.174 12.565 189.809 1.00 0.50 C ATOM 3748 CD GLU 234 35.621 12.463 191.218 1.00 0.50 C ATOM 3749 OE1 GLU 234 34.599 13.114 191.524 1.00 0.50 O ATOM 3750 OE2 GLU 234 36.226 11.725 192.034 1.00 0.50 O ATOM 3757 N GLN 235 39.108 14.873 188.721 1.00 0.50 N ATOM 3758 CA GLN 235 40.496 14.565 188.399 1.00 0.50 C ATOM 3759 C GLN 235 41.448 15.539 189.080 1.00 0.50 C ATOM 3760 O GLN 235 42.593 15.198 189.379 1.00 0.50 O ATOM 3761 CB GLN 235 40.716 14.599 186.884 1.00 0.50 C ATOM 3762 CG GLN 235 40.005 13.474 186.140 1.00 0.50 C ATOM 3763 CD GLN 235 40.178 13.566 184.635 1.00 0.50 C ATOM 3764 OE1 GLN 235 40.796 14.506 184.124 1.00 0.50 O ATOM 3765 NE2 GLN 235 39.631 12.595 183.910 1.00 0.50 N ATOM 3774 N THR 236 40.969 16.755 189.323 1.00 0.50 N ATOM 3775 CA THR 236 41.777 17.782 189.969 1.00 0.50 C ATOM 3776 C THR 236 41.509 17.831 191.469 1.00 0.50 C ATOM 3777 O THR 236 42.434 17.968 192.269 1.00 0.50 O ATOM 3778 CB THR 236 41.502 19.174 189.357 1.00 0.50 C ATOM 3779 OG1 THR 236 41.853 19.144 187.968 1.00 0.50 O ATOM 3780 CG2 THR 236 42.317 20.253 190.057 1.00 0.50 C ATOM 3788 N GLN 237 40.239 17.719 191.841 1.00 0.50 N ATOM 3789 CA GLN 237 39.848 17.750 193.245 1.00 0.50 C ATOM 3790 C GLN 237 40.412 16.554 194.001 1.00 0.50 C ATOM 3791 O GLN 237 41.579 16.550 194.394 1.00 0.50 O ATOM 3792 CB GLN 237 38.322 17.774 193.376 1.00 0.50 C ATOM 3793 CG GLN 237 37.677 19.016 192.771 1.00 0.50 C ATOM 3794 CD GLN 237 38.101 20.295 193.470 1.00 0.50 C ATOM 3795 OE1 GLN 237 38.100 20.374 194.703 1.00 0.50 O ATOM 3796 NE2 GLN 237 38.463 21.310 192.692 1.00 0.50 N ATOM 3805 N LYS 238 39.576 15.541 194.204 1.00 0.50 N ATOM 3806 CA LYS 238 39.991 14.337 194.913 1.00 0.50 C ATOM 3807 C LYS 238 40.973 13.519 194.084 1.00 0.50 C ATOM 3808 O LYS 238 41.958 12.999 194.606 1.00 0.50 O ATOM 3809 CB LYS 238 38.773 13.480 195.270 1.00 0.50 C ATOM 3810 CG LYS 238 39.116 12.214 196.040 1.00 0.50 C ATOM 3811 CD LYS 238 39.678 12.537 197.418 1.00 0.50 C ATOM 3812 CE LYS 238 39.913 11.275 198.240 1.00 0.50 C ATOM 3813 NZ LYS 238 40.510 11.586 199.571 1.00 0.50 N ATOM 3827 N ILE 239 40.695 13.406 192.789 1.00 0.50 N ATOM 3828 CA ILE 239 41.554 12.651 191.884 1.00 0.50 C ATOM 3829 C ILE 239 42.899 13.341 191.697 1.00 0.50 C ATOM 3830 O ILE 239 43.931 12.683 191.559 1.00 0.50 O ATOM 3831 CB ILE 239 40.879 12.457 190.506 1.00 0.50 C ATOM 3832 CG1 ILE 239 39.660 11.537 190.635 1.00 0.50 C ATOM 3833 CG2 ILE 239 41.876 11.895 189.491 1.00 0.50 C ATOM 3834 CD1 ILE 239 38.633 11.721 189.528 1.00 0.50 C ATOM 3846 N ILE 240 42.882 14.669 191.690 1.00 0.50 N ATOM 3847 CA ILE 240 44.100 15.451 191.519 1.00 0.50 C ATOM 3848 C ILE 240 45.227 14.913 192.392 1.00 0.50 C ATOM 3849 O ILE 240 46.276 14.510 191.890 1.00 0.50 O ATOM 3850 CB ILE 240 43.859 16.942 191.852 1.00 0.50 C ATOM 3851 CG1 ILE 240 42.822 17.540 190.893 1.00 0.50 C ATOM 3852 CG2 ILE 240 45.169 17.729 191.790 1.00 0.50 C ATOM 3853 CD1 ILE 240 43.263 17.544 189.438 1.00 0.50 C ATOM 3865 N ASP 241 45.004 14.911 193.702 1.00 0.50 N ATOM 3866 CA ASP 241 46.000 14.424 194.648 1.00 0.50 C ATOM 3867 C ASP 241 46.260 12.935 194.457 1.00 0.50 C ATOM 3868 O ASP 241 47.407 12.490 194.457 1.00 0.50 O ATOM 3869 CB ASP 241 45.548 14.696 196.086 1.00 0.50 C ATOM 3870 CG ASP 241 46.518 14.166 197.125 1.00 0.50 C ATOM 3871 OD1 ASP 241 47.591 14.770 197.328 1.00 0.50 O ATOM 3872 OD2 ASP 241 46.202 13.125 197.745 1.00 0.50 O ATOM 3877 N PHE 242 45.187 12.169 194.295 1.00 0.50 N ATOM 3878 CA PHE 242 45.295 10.728 194.103 1.00 0.50 C ATOM 3879 C PHE 242 45.979 10.399 192.781 1.00 0.50 C ATOM 3880 O PHE 242 46.928 9.616 192.741 1.00 0.50 O ATOM 3881 CB PHE 242 43.908 10.073 194.146 1.00 0.50 C ATOM 3882 CG PHE 242 43.930 8.587 193.889 1.00 0.50 C ATOM 3883 CD1 PHE 242 44.325 7.703 194.885 1.00 0.50 C ATOM 3884 CD2 PHE 242 43.555 8.081 192.650 1.00 0.50 C ATOM 3885 CE1 PHE 242 44.348 6.330 194.652 1.00 0.50 C ATOM 3886 CE2 PHE 242 43.576 6.709 192.405 1.00 0.50 C ATOM 3887 CZ PHE 242 43.973 5.835 193.409 1.00 0.50 C ATOM 3897 N VAL 243 45.489 10.999 191.702 1.00 0.50 N ATOM 3898 CA VAL 243 46.051 10.771 190.377 1.00 0.50 C ATOM 3899 C VAL 243 47.356 11.535 190.193 1.00 0.50 C ATOM 3900 O VAL 243 48.343 10.988 189.700 1.00 0.50 O ATOM 3901 CB VAL 243 45.057 11.181 189.267 1.00 0.50 C ATOM 3902 CG1 VAL 243 45.705 11.067 187.892 1.00 0.50 C ATOM 3903 CG2 VAL 243 43.802 10.318 189.333 1.00 0.50 C ATOM 3913 N LYS 244 47.355 12.803 190.589 1.00 0.50 N ATOM 3914 CA LYS 244 48.539 13.645 190.469 1.00 0.50 C ATOM 3915 C LYS 244 49.730 13.026 191.190 1.00 0.50 C ATOM 3916 O LYS 244 50.876 13.413 190.960 1.00 0.50 O ATOM 3917 CB LYS 244 48.261 15.042 191.030 1.00 0.50 C ATOM 3918 CG LYS 244 49.412 16.018 190.847 1.00 0.50 C ATOM 3919 CD LYS 244 49.033 17.420 191.308 1.00 0.50 C ATOM 3920 CE LYS 244 50.190 18.399 191.145 1.00 0.50 C ATOM 3921 NZ LYS 244 49.816 19.773 191.586 1.00 0.50 N ATOM 3935 N ILE 245 49.453 12.066 192.065 1.00 0.50 N ATOM 3936 CA ILE 245 50.501 11.392 192.821 1.00 0.50 C ATOM 3937 C ILE 245 51.664 12.333 193.108 1.00 0.50 C ATOM 3938 O ILE 245 52.580 11.993 193.858 1.00 0.50 O ATOM 3939 CB ILE 245 51.021 10.146 192.066 1.00 0.50 C ATOM 3940 CG1 ILE 245 51.619 10.554 190.715 1.00 0.50 C ATOM 3941 CG2 ILE 245 49.899 9.123 191.875 1.00 0.50 C ATOM 3942 CD1 ILE 245 52.352 9.427 190.003 1.00 0.50 C ATOM 3954 N ASP 246 51.623 13.517 192.506 1.00 0.50 N ATOM 3955 CA ASP 246 52.675 14.509 192.696 1.00 0.50 C ATOM 3956 C ASP 246 52.971 14.721 194.175 1.00 0.50 C ATOM 3957 O ASP 246 53.645 15.681 194.552 1.00 0.50 O ATOM 3958 CB ASP 246 52.278 15.838 192.045 1.00 0.50 C ATOM 3959 CG ASP 246 53.405 16.853 192.029 1.00 0.50 C ATOM 3960 OD1 ASP 246 54.512 16.548 192.522 1.00 0.50 O ATOM 3961 OD2 ASP 246 53.178 17.973 191.519 1.00 0.50 O ATOM 3966 N GLY 247 52.461 13.822 195.011 1.00 0.50 N ATOM 3967 CA GLY 247 52.670 13.910 196.451 1.00 0.50 C ATOM 3968 C GLY 247 52.024 15.164 197.026 1.00 0.50 C ATOM 3969 O GLY 247 51.252 15.093 197.982 1.00 0.50 O ATOM 3973 N SER 248 52.347 16.312 196.439 1.00 0.50 N ATOM 3974 CA SER 248 51.798 17.584 196.892 1.00 0.50 C ATOM 3975 C SER 248 50.275 17.566 196.872 1.00 0.50 C ATOM 3976 O SER 248 49.626 18.142 197.745 1.00 0.50 O ATOM 3977 CB SER 248 52.314 18.730 196.017 1.00 0.50 C ATOM 3978 OG SER 248 53.729 18.808 196.085 1.00 0.50 O ATOM 3984 N VAL 249 49.710 16.904 195.868 1.00 0.50 N ATOM 3985 CA VAL 249 48.261 16.811 195.731 1.00 0.50 C ATOM 3986 C VAL 249 47.674 15.840 196.748 1.00 0.50 C ATOM 3987 O VAL 249 46.596 16.076 197.295 1.00 0.50 O ATOM 3988 CB VAL 249 47.860 16.366 194.307 1.00 0.50 C ATOM 3989 CG1 VAL 249 48.433 17.317 193.262 1.00 0.50 C ATOM 3990 CG2 VAL 249 48.339 14.943 194.041 1.00 0.50 C ATOM 4000 N ASP 250 48.386 14.746 196.996 1.00 0.50 N ATOM 4001 CA ASP 250 47.936 13.737 197.946 1.00 0.50 C ATOM 4002 C ASP 250 47.762 14.331 199.338 1.00 0.50 C ATOM 4003 O ASP 250 46.763 14.077 200.011 1.00 0.50 O ATOM 4004 CB ASP 250 48.927 12.570 197.996 1.00 0.50 C ATOM 4005 CG ASP 250 48.545 11.506 199.006 1.00 0.50 C ATOM 4006 OD1 ASP 250 47.607 10.723 198.748 1.00 0.50 O ATOM 4007 OD2 ASP 250 49.191 11.455 200.077 1.00 0.50 O ATOM 4012 N ASP 251 48.740 15.122 199.766 1.00 0.50 N ATOM 4013 CA ASP 251 48.697 15.754 201.079 1.00 0.50 C ATOM 4014 C ASP 251 47.397 16.524 201.277 1.00 0.50 C ATOM 4015 O ASP 251 46.737 16.392 202.307 1.00 0.50 O ATOM 4016 CB ASP 251 49.894 16.693 201.259 1.00 0.50 C ATOM 4017 CG ASP 251 51.206 15.954 201.449 1.00 0.50 C ATOM 4018 OD1 ASP 251 51.191 14.727 201.682 1.00 0.50 O ATOM 4019 OD2 ASP 251 52.267 16.614 201.369 1.00 0.50 O ATOM 4024 N VAL 252 47.037 17.331 200.284 1.00 0.50 N ATOM 4025 CA VAL 252 45.815 18.125 200.348 1.00 0.50 C ATOM 4026 C VAL 252 44.579 17.237 200.310 1.00 0.50 C ATOM 4027 O VAL 252 43.588 17.506 200.990 1.00 0.50 O ATOM 4028 CB VAL 252 45.748 19.145 199.189 1.00 0.50 C ATOM 4029 CG1 VAL 252 44.389 19.836 199.154 1.00 0.50 C ATOM 4030 CG2 VAL 252 46.861 20.179 199.327 1.00 0.50 C ATOM 4040 N LEU 253 44.641 16.178 199.510 1.00 0.50 N ATOM 4041 CA LEU 253 43.526 15.247 199.382 1.00 0.50 C ATOM 4042 C LEU 253 43.353 14.417 200.648 1.00 0.50 C ATOM 4043 O LEU 253 42.232 14.167 201.089 1.00 0.50 O ATOM 4044 CB LEU 253 43.743 14.321 198.181 1.00 0.50 C ATOM 4045 CG LEU 253 43.825 14.997 196.810 1.00 0.50 C ATOM 4046 CD1 LEU 253 44.232 13.983 195.748 1.00 0.50 C ATOM 4047 CD2 LEU 253 42.485 15.629 196.457 1.00 0.50 C ATOM 4059 N ASP 254 44.471 13.989 201.225 1.00 0.50 N ATOM 4060 CA ASP 254 44.445 13.185 202.441 1.00 0.50 C ATOM 4061 C ASP 254 43.568 13.828 203.508 1.00 0.50 C ATOM 4062 O ASP 254 43.103 13.157 204.430 1.00 0.50 O ATOM 4063 CB ASP 254 45.865 12.987 202.980 1.00 0.50 C ATOM 4064 CG ASP 254 46.881 12.697 201.892 1.00 0.50 C ATOM 4065 OD1 ASP 254 46.669 11.764 201.089 1.00 0.50 O ATOM 4066 OD2 ASP 254 47.908 13.412 201.842 1.00 0.50 O ATOM 4071 N LYS 255 43.347 15.132 203.379 1.00 0.50 N ATOM 4072 CA LYS 255 42.525 15.867 204.332 1.00 0.50 C ATOM 4073 C LYS 255 41.099 16.027 203.821 1.00 0.50 C ATOM 4074 O LYS 255 40.186 16.339 204.587 1.00 0.50 O ATOM 4075 CB LYS 255 43.133 17.244 204.613 1.00 0.50 C ATOM 4076 CG LYS 255 44.505 17.188 205.267 1.00 0.50 C ATOM 4077 CD LYS 255 45.027 18.583 205.586 1.00 0.50 C ATOM 4078 CE LYS 255 46.379 18.532 206.287 1.00 0.50 C ATOM 4079 NZ LYS 255 46.909 19.897 206.564 1.00 0.50 N ATOM 4093 N LEU 256 40.913 15.812 202.523 1.00 0.50 N ATOM 4094 CA LEU 256 39.597 15.932 201.908 1.00 0.50 C ATOM 4095 C LEU 256 38.739 14.707 202.197 1.00 0.50 C ATOM 4096 O LEU 256 37.513 14.793 202.245 1.00 0.50 O ATOM 4097 CB LEU 256 39.734 16.120 200.392 1.00 0.50 C ATOM 4098 CG LEU 256 40.471 17.381 199.930 1.00 0.50 C ATOM 4099 CD1 LEU 256 40.381 17.515 198.415 1.00 0.50 C ATOM 4100 CD2 LEU 256 39.881 18.610 200.610 1.00 0.50 C ATOM 4112 N LYS 257 39.392 13.565 202.388 1.00 0.50 N ATOM 4113 CA LYS 257 38.691 12.320 202.672 1.00 0.50 C ATOM 4114 C LYS 257 37.247 12.378 202.189 1.00 0.50 C ATOM 4115 O LYS 257 36.318 12.086 202.941 1.00 0.50 O ATOM 4116 CB LYS 257 38.724 12.018 204.173 1.00 0.50 C ATOM 4117 CG LYS 257 40.082 11.558 204.678 1.00 0.50 C ATOM 4118 CD LYS 257 41.147 11.675 203.594 1.00 0.50 C ATOM 4119 CE LYS 257 40.821 12.783 202.601 1.00 0.50 C ATOM 4120 NZ LYS 257 39.352 13.010 202.488 1.00 0.50 N ATOM 4134 N HIS 258 37.066 12.757 200.928 1.00 0.50 N ATOM 4135 CA HIS 258 35.735 12.854 200.341 1.00 0.50 C ATOM 4136 C HIS 258 35.271 11.506 199.804 1.00 0.50 C ATOM 4137 O HIS 258 34.481 10.811 200.444 1.00 0.50 O ATOM 4138 CB HIS 258 35.723 13.893 199.212 1.00 0.50 C ATOM 4139 CG HIS 258 34.372 14.075 198.591 1.00 0.50 C ATOM 4140 ND1 HIS 258 33.333 14.710 199.236 1.00 0.50 N ATOM 4141 CD2 HIS 258 33.902 13.701 197.374 1.00 0.50 C ATOM 4142 CE1 HIS 258 32.274 14.718 198.438 1.00 0.50 C ATOM 4143 NE2 HIS 258 32.593 14.113 197.304 1.00 0.50 N ATOM 4151 N LEU 259 35.763 11.143 198.625 1.00 0.50 N ATOM 4152 CA LEU 259 35.398 9.877 197.999 1.00 0.50 C ATOM 4153 C LEU 259 34.241 9.213 198.734 1.00 0.50 C ATOM 4154 O LEU 259 33.080 9.387 198.365 1.00 0.50 O ATOM 4155 CB LEU 259 36.604 8.932 197.973 1.00 0.50 C ATOM 4156 CG LEU 259 37.794 9.376 197.117 1.00 0.50 C ATOM 4157 CD1 LEU 259 38.959 8.409 197.296 1.00 0.50 C ATOM 4158 CD2 LEU 259 37.386 9.452 195.652 1.00 0.50 C ATOM 4170 N SER 260 34.566 8.451 199.773 1.00 0.50 N ATOM 4171 CA SER 260 33.552 7.759 200.560 1.00 0.50 C ATOM 4172 C SER 260 32.269 8.574 200.645 1.00 0.50 C ATOM 4173 O SER 260 31.173 8.047 200.449 1.00 0.50 O ATOM 4174 CB SER 260 34.076 7.471 201.970 1.00 0.50 C ATOM 4175 OG SER 260 35.137 6.531 201.922 1.00 0.50 O ATOM 4181 N GLN 261 32.409 9.861 200.940 1.00 0.50 N ATOM 4182 CA GLN 261 31.261 10.753 201.052 1.00 0.50 C ATOM 4183 C GLN 261 30.391 10.689 199.802 1.00 0.50 C ATOM 4184 O GLN 261 29.218 10.324 199.869 1.00 0.50 O ATOM 4185 CB GLN 261 31.722 12.194 201.291 1.00 0.50 C ATOM 4186 CG GLN 261 30.665 13.070 201.952 1.00 0.50 C ATOM 4187 CD GLN 261 31.189 14.448 202.312 1.00 0.50 C ATOM 4188 OE1 GLN 261 32.400 14.688 202.307 1.00 0.50 O ATOM 4189 NE2 GLN 261 30.283 15.367 202.632 1.00 0.50 N ATOM 4198 N THR 262 30.974 11.048 198.664 1.00 0.50 N ATOM 4199 CA THR 262 30.253 11.033 197.396 1.00 0.50 C ATOM 4200 C THR 262 29.167 9.964 197.392 1.00 0.50 C ATOM 4201 O THR 262 27.991 10.261 197.181 1.00 0.50 O ATOM 4202 CB THR 262 31.214 10.786 196.212 1.00 0.50 C ATOM 4203 OG1 THR 262 32.254 11.771 196.249 1.00 0.50 O ATOM 4204 CG2 THR 262 30.481 10.880 194.881 1.00 0.50 C ATOM 4212 N LEU 263 29.569 8.719 197.626 1.00 0.50 N ATOM 4213 CA LEU 263 28.632 7.603 197.650 1.00 0.50 C ATOM 4214 C LEU 263 28.025 7.364 196.274 1.00 0.50 C ATOM 4215 O LEU 263 28.102 6.261 195.733 1.00 0.50 O ATOM 4216 CB LEU 263 27.517 7.867 198.668 1.00 0.50 C ATOM 4217 CG LEU 263 27.959 8.055 200.121 1.00 0.50 C ATOM 4218 CD1 LEU 263 26.748 8.030 201.045 1.00 0.50 C ATOM 4219 CD2 LEU 263 28.949 6.966 200.513 1.00 0.50 C ATOM 4231 N PRO 264 27.418 8.405 195.712 1.00 0.50 N ATOM 4232 CA PRO 264 26.795 8.311 194.397 1.00 0.50 C ATOM 4233 C PRO 264 25.318 8.679 194.459 1.00 0.50 C ATOM 4234 O PRO 264 24.765 9.228 193.506 1.00 0.50 O ATOM 4235 CB PRO 264 27.005 6.848 194.000 1.00 0.50 C ATOM 4236 CG PRO 264 27.218 6.147 195.310 1.00 0.50 C ATOM 4237 CD PRO 264 27.923 7.168 196.176 1.00 0.50 C ATOM 4245 N GLU 265 24.684 8.371 195.585 1.00 0.50 N ATOM 4246 CA GLU 265 23.269 8.669 195.773 1.00 0.50 C ATOM 4247 C GLU 265 22.408 7.909 194.772 1.00 0.50 C ATOM 4248 O GLU 265 21.937 6.808 195.054 1.00 0.50 O ATOM 4249 CB GLU 265 23.016 10.174 195.638 1.00 0.50 C ATOM 4250 CG GLU 265 22.486 10.823 196.910 1.00 0.50 C ATOM 4251 CD GLU 265 21.046 10.453 197.218 1.00 0.50 C ATOM 4252 OE1 GLU 265 20.144 10.791 196.421 1.00 0.50 O ATOM 4253 OE2 GLU 265 20.816 9.824 198.278 1.00 0.50 O ATOM 4260 N SER 266 22.205 8.505 193.602 1.00 0.50 N ATOM 4261 CA SER 266 21.401 7.885 192.556 1.00 0.50 C ATOM 4262 C SER 266 21.979 6.539 192.140 1.00 0.50 C ATOM 4263 O SER 266 21.241 5.595 191.857 1.00 0.50 O ATOM 4264 CB SER 266 21.308 8.808 191.338 1.00 0.50 C ATOM 4265 OG SER 266 20.589 9.986 191.660 1.00 0.50 O ATOM 4271 N GLU 267 23.305 6.456 192.105 1.00 0.50 N ATOM 4272 CA GLU 267 23.986 5.225 191.723 1.00 0.50 C ATOM 4273 C GLU 267 24.237 4.336 192.935 1.00 0.50 C ATOM 4274 O GLU 267 24.403 3.123 192.804 1.00 0.50 O ATOM 4275 CB GLU 267 25.313 5.541 191.026 1.00 0.50 C ATOM 4276 CG GLU 267 26.074 4.305 190.565 1.00 0.50 C ATOM 4277 CD GLU 267 27.334 4.633 189.783 1.00 0.50 C ATOM 4278 OE1 GLU 267 27.632 5.829 189.577 1.00 0.50 O ATOM 4279 OE2 GLU 267 28.028 3.676 189.362 1.00 0.50 O ATOM 4286 N GLN 268 24.268 4.947 194.114 1.00 0.50 N ATOM 4287 CA GLN 268 24.500 4.212 195.352 1.00 0.50 C ATOM 4288 C GLN 268 23.234 3.508 195.821 1.00 0.50 C ATOM 4289 O GLN 268 22.869 2.453 195.301 1.00 0.50 O ATOM 4290 CB GLN 268 25.005 5.155 196.448 1.00 0.50 C ATOM 4291 CG GLN 268 25.358 4.443 197.749 1.00 0.50 C ATOM 4292 CD GLN 268 25.913 5.387 198.801 1.00 0.50 C ATOM 4293 OE1 GLN 268 26.018 6.597 198.575 1.00 0.50 O ATOM 4294 NE2 GLN 268 26.277 4.845 199.958 1.00 0.50 N ATOM 4303 N PHE 269 22.566 4.097 196.807 1.00 0.50 N ATOM 4304 CA PHE 269 21.338 3.526 197.349 1.00 0.50 C ATOM 4305 C PHE 269 21.165 2.076 196.914 1.00 0.50 C ATOM 4306 O PHE 269 21.491 1.152 197.659 1.00 0.50 O ATOM 4307 CB PHE 269 20.121 4.349 196.903 1.00 0.50 C ATOM 4308 CG PHE 269 18.813 3.845 197.457 1.00 0.50 C ATOM 4309 CD1 PHE 269 18.446 4.119 198.769 1.00 0.50 C ATOM 4310 CD2 PHE 269 17.953 3.094 196.661 1.00 0.50 C ATOM 4311 CE1 PHE 269 17.238 3.653 199.284 1.00 0.50 C ATOM 4312 CE2 PHE 269 16.743 2.624 197.168 1.00 0.50 C ATOM 4313 CZ PHE 269 16.388 2.905 198.481 1.00 0.50 C ATOM 4323 N ASN 270 20.650 1.884 195.704 1.00 0.50 N ATOM 4324 CA ASN 270 20.433 0.547 195.168 1.00 0.50 C ATOM 4325 C ASN 270 21.714 -0.024 194.572 1.00 0.50 C ATOM 4326 O ASN 270 21.947 -1.231 194.615 1.00 0.50 O ATOM 4327 CB ASN 270 19.321 0.568 194.113 1.00 0.50 C ATOM 4328 CG ASN 270 19.047 -0.805 193.529 1.00 0.50 C ATOM 4329 OD1 ASN 270 19.384 -1.079 192.373 1.00 0.50 O ATOM 4330 ND2 ASN 270 18.437 -1.679 194.319 1.00 0.50 N TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 644 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 54.51 66.0 162 100.0 162 ARMSMC SECONDARY STRUCTURE . . 29.70 81.9 116 100.0 116 ARMSMC SURFACE . . . . . . . . 55.84 66.4 116 100.0 116 ARMSMC BURIED . . . . . . . . 51.02 65.2 46 100.0 46 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 68.05 60.5 76 100.0 76 ARMSSC1 RELIABLE SIDE CHAINS . 66.39 60.6 71 100.0 71 ARMSSC1 SECONDARY STRUCTURE . . 63.57 61.8 55 100.0 55 ARMSSC1 SURFACE . . . . . . . . 73.23 53.7 54 100.0 54 ARMSSC1 BURIED . . . . . . . . 53.24 77.3 22 100.0 22 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 71.01 54.2 59 100.0 59 ARMSSC2 RELIABLE SIDE CHAINS . 70.55 53.3 45 100.0 45 ARMSSC2 SECONDARY STRUCTURE . . 72.01 50.0 42 100.0 42 ARMSSC2 SURFACE . . . . . . . . 70.26 56.1 41 100.0 41 ARMSSC2 BURIED . . . . . . . . 72.71 50.0 18 100.0 18 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 58.10 47.8 23 100.0 23 ARMSSC3 RELIABLE SIDE CHAINS . 57.48 52.9 17 100.0 17 ARMSSC3 SECONDARY STRUCTURE . . 59.35 47.4 19 100.0 19 ARMSSC3 SURFACE . . . . . . . . 59.13 45.5 22 100.0 22 ARMSSC3 BURIED . . . . . . . . 26.83 100.0 1 100.0 1 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 80.18 44.4 9 100.0 9 ARMSSC4 RELIABLE SIDE CHAINS . 80.18 44.4 9 100.0 9 ARMSSC4 SECONDARY STRUCTURE . . 84.98 37.5 8 100.0 8 ARMSSC4 SURFACE . . . . . . . . 80.18 44.4 9 100.0 9 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 9.93 (Number of atoms: 82) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 9.93 82 100.0 82 CRMSCA CRN = ALL/NP . . . . . 0.1211 CRMSCA SECONDARY STRUCTURE . . 9.79 58 100.0 58 CRMSCA SURFACE . . . . . . . . 10.33 59 100.0 59 CRMSCA BURIED . . . . . . . . 8.85 23 100.0 23 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 9.99 406 100.0 406 CRMSMC SECONDARY STRUCTURE . . 9.82 288 100.0 288 CRMSMC SURFACE . . . . . . . . 10.34 292 100.0 292 CRMSMC BURIED . . . . . . . . 9.02 114 100.0 114 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 12.19 316 100.0 316 CRMSSC RELIABLE SIDE CHAINS . 12.17 264 100.0 264 CRMSSC SECONDARY STRUCTURE . . 11.90 232 100.0 232 CRMSSC SURFACE . . . . . . . . 12.70 221 100.0 221 CRMSSC BURIED . . . . . . . . 10.91 95 100.0 95 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 11.02 644 100.0 644 CRMSALL SECONDARY STRUCTURE . . 10.82 464 100.0 464 CRMSALL SURFACE . . . . . . . . 11.42 457 100.0 457 CRMSALL BURIED . . . . . . . . 10.00 187 100.0 187 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.952 0.889 0.445 82 100.0 82 ERRCA SECONDARY STRUCTURE . . 8.849 0.889 0.445 58 100.0 58 ERRCA SURFACE . . . . . . . . 9.292 0.892 0.446 59 100.0 59 ERRCA BURIED . . . . . . . . 8.079 0.884 0.442 23 100.0 23 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.989 0.889 0.445 406 100.0 406 ERRMC SECONDARY STRUCTURE . . 8.870 0.889 0.445 288 100.0 288 ERRMC SURFACE . . . . . . . . 9.294 0.892 0.446 292 100.0 292 ERRMC BURIED . . . . . . . . 8.206 0.884 0.442 114 100.0 114 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 10.926 0.904 0.452 316 100.0 316 ERRSC RELIABLE SIDE CHAINS . 10.871 0.903 0.452 264 100.0 264 ERRSC SECONDARY STRUCTURE . . 10.731 0.904 0.452 232 100.0 232 ERRSC SURFACE . . . . . . . . 11.439 0.909 0.454 221 100.0 221 ERRSC BURIED . . . . . . . . 9.731 0.894 0.447 95 100.0 95 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 9.851 0.896 0.448 644 100.0 644 ERRALL SECONDARY STRUCTURE . . 9.718 0.896 0.448 464 100.0 464 ERRALL SURFACE . . . . . . . . 10.214 0.899 0.450 457 100.0 457 ERRALL BURIED . . . . . . . . 8.962 0.889 0.444 187 100.0 187 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 4 52 82 82 DISTCA CA (P) 0.00 0.00 0.00 4.88 63.41 82 DISTCA CA (RMS) 0.00 0.00 0.00 3.99 7.72 DISTCA ALL (N) 0 0 1 28 344 644 644 DISTALL ALL (P) 0.00 0.00 0.16 4.35 53.42 644 DISTALL ALL (RMS) 0.00 0.00 2.94 4.16 7.73 DISTALL END of the results output