####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 82 ( 656), selected 82 , name T0589TS173_1-D2 # Molecule2: number of CA atoms 82 ( 644), selected 82 , name T0589-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0589TS173_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 79 189 - 267 4.88 5.38 LCS_AVERAGE: 93.71 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 42 205 - 246 1.85 6.99 LCS_AVERAGE: 32.94 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 37 209 - 245 0.90 7.02 LCS_AVERAGE: 24.46 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 82 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT V 189 V 189 10 14 79 8 11 15 26 37 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT L 190 L 190 10 14 79 8 11 15 26 39 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT T 191 T 191 10 14 79 8 11 15 28 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT G 192 G 192 10 14 79 8 11 15 26 38 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT F 193 F 193 10 14 79 8 11 15 28 39 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT F 194 F 194 10 14 79 8 14 25 35 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT Q 195 Q 195 10 14 79 8 11 22 31 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT S 196 S 196 10 14 79 8 11 12 24 37 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT L 197 L 197 10 14 79 6 14 24 35 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT N 198 N 198 10 14 79 4 6 10 15 30 43 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT I 199 I 199 4 14 79 6 8 14 28 39 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT S 200 S 200 4 14 79 5 11 12 23 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT E 201 E 201 5 14 79 3 5 9 15 27 41 47 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT T 202 T 202 5 14 79 3 5 5 38 38 42 48 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT Q 203 Q 203 5 8 79 3 5 5 7 16 22 30 45 53 61 66 68 70 71 71 73 74 75 76 77 LCS_GDT I 204 I 204 5 8 79 3 5 9 13 16 28 41 51 60 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT K 205 K 205 5 42 79 3 5 5 6 7 8 27 50 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT S 206 S 206 5 42 79 3 4 5 18 26 32 35 39 45 59 63 68 70 71 71 73 74 75 76 77 LCS_GDT C 207 C 207 3 42 79 3 3 4 9 10 14 22 36 41 53 65 68 70 71 71 73 74 75 76 77 LCS_GDT I 208 I 208 26 42 79 4 8 9 26 37 43 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT S 209 S 209 37 42 79 5 22 37 38 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT I 210 I 210 37 42 79 16 29 37 38 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT I 211 I 211 37 42 79 5 28 37 38 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT D 212 D 212 37 42 79 11 29 37 38 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT N 213 N 213 37 42 79 6 29 37 38 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT L 214 L 214 37 42 79 16 29 37 38 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT E 215 E 215 37 42 79 13 29 37 38 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT K 216 K 216 37 42 79 9 29 37 38 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT I 217 I 217 37 42 79 16 29 37 38 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT G 218 G 218 37 42 79 3 6 37 38 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT E 219 E 219 37 42 79 10 29 37 38 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT A 220 A 220 37 42 79 10 29 37 38 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT K 221 K 221 37 42 79 16 29 37 38 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT V 222 V 222 37 42 79 16 29 37 38 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT K 223 K 223 37 42 79 16 29 37 38 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT L 224 L 224 37 42 79 16 29 37 38 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT E 225 E 225 37 42 79 16 29 37 38 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT L 226 L 226 37 42 79 16 29 37 38 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT E 227 E 227 37 42 79 16 29 37 38 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT K 228 K 228 37 42 79 16 29 37 38 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT E 229 E 229 37 42 79 16 29 37 38 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT G 230 G 230 37 42 79 16 29 37 38 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT I 231 I 231 37 42 79 16 29 37 38 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT N 232 N 232 37 42 79 16 29 37 38 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT P 233 P 233 37 42 79 14 29 37 38 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT E 234 E 234 37 42 79 14 28 37 38 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT Q 235 Q 235 37 42 79 14 29 37 38 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT T 236 T 236 37 42 79 14 29 37 38 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT Q 237 Q 237 37 42 79 14 29 37 38 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT K 238 K 238 37 42 79 14 29 37 38 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT I 239 I 239 37 42 79 16 29 37 38 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT I 240 I 240 37 42 79 14 28 37 38 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT D 241 D 241 37 42 79 14 26 37 38 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT F 242 F 242 37 42 79 14 29 37 38 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT V 243 V 243 37 42 79 14 29 37 38 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT K 244 K 244 37 42 79 14 20 37 38 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT I 245 I 245 37 42 79 14 20 37 38 38 43 47 52 57 62 66 68 70 71 71 73 74 75 76 77 LCS_GDT D 246 D 246 6 42 79 6 14 25 35 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT G 247 G 247 6 41 79 4 8 11 20 34 45 51 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT S 248 S 248 6 40 79 4 8 11 18 30 43 49 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT V 249 V 249 6 10 79 4 8 11 18 30 43 50 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT D 250 D 250 6 10 79 3 8 11 13 30 43 49 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT D 251 D 251 6 10 79 3 5 6 8 13 22 42 54 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT V 252 V 252 5 10 79 3 4 5 7 13 19 29 52 60 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT L 253 L 253 5 10 79 3 4 5 7 15 19 23 32 44 58 63 66 70 71 71 73 74 75 76 77 LCS_GDT D 254 D 254 5 10 79 3 8 11 13 23 29 44 55 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT K 255 K 255 5 10 79 3 8 11 13 30 43 49 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT L 256 L 256 3 7 79 3 4 4 6 12 12 12 22 28 46 54 62 67 71 71 73 74 75 76 77 LCS_GDT K 257 K 257 4 4 79 3 4 4 7 10 16 19 24 29 33 44 55 60 67 71 73 74 74 76 77 LCS_GDT H 258 H 258 4 4 79 3 3 4 4 8 16 20 25 31 38 49 56 62 71 71 73 74 75 76 77 LCS_GDT L 259 L 259 4 4 79 3 3 6 7 13 18 32 48 56 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT S 260 S 260 4 4 79 1 3 6 13 30 43 49 58 61 64 66 68 70 71 71 73 74 75 76 77 LCS_GDT Q 261 Q 261 3 6 79 0 3 3 3 7 9 10 20 53 63 66 68 70 70 71 73 74 75 76 77 LCS_GDT T 262 T 262 3 6 79 3 3 3 4 5 9 11 35 45 52 59 61 66 70 71 72 73 75 76 77 LCS_GDT L 263 L 263 4 7 79 3 4 5 5 8 9 10 12 14 15 17 20 22 40 63 64 68 72 74 76 LCS_GDT P 264 P 264 4 7 79 3 4 5 5 8 9 10 12 13 15 16 20 66 69 71 72 74 75 76 77 LCS_GDT E 265 E 265 4 7 79 3 4 5 5 8 9 10 12 14 15 17 20 22 24 39 42 69 73 76 77 LCS_GDT S 266 S 266 4 7 79 3 4 4 6 7 8 9 12 14 15 17 20 22 24 24 25 32 57 61 77 LCS_GDT E 267 E 267 3 7 79 3 3 4 6 8 9 10 12 14 15 17 20 22 24 26 26 34 39 73 76 LCS_GDT Q 268 Q 268 3 7 20 1 3 5 5 8 9 10 12 14 15 17 20 21 24 26 26 30 35 38 38 LCS_GDT F 269 F 269 3 7 20 1 3 5 5 8 9 10 12 14 15 17 20 22 35 39 42 69 72 76 77 LCS_GDT N 270 N 270 3 4 20 1 3 4 4 7 11 11 16 31 52 61 66 70 70 71 73 74 75 76 77 LCS_AVERAGE LCS_A: 50.37 ( 24.46 32.94 93.71 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 16 29 37 38 40 47 51 58 61 64 66 68 70 71 71 73 74 75 76 77 GDT PERCENT_AT 19.51 35.37 45.12 46.34 48.78 57.32 62.20 70.73 74.39 78.05 80.49 82.93 85.37 86.59 86.59 89.02 90.24 91.46 92.68 93.90 GDT RMS_LOCAL 0.33 0.67 0.90 0.99 1.36 1.84 2.08 2.59 2.77 2.95 3.11 3.26 3.42 3.62 3.54 3.82 3.91 4.01 4.14 4.39 GDT RMS_ALL_AT 6.82 6.90 7.02 7.10 6.35 5.97 5.81 5.48 5.46 5.49 5.53 5.52 5.48 5.46 5.44 5.50 5.46 5.46 5.47 5.39 # Checking swapping # possible swapping detected: E 219 E 219 # possible swapping detected: E 229 E 229 # possible swapping detected: D 246 D 246 # possible swapping detected: D 251 D 251 # possible swapping detected: F 269 F 269 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA V 189 V 189 2.459 0 0.000 0.057 3.008 64.762 60.476 LGA L 190 L 190 2.150 0 0.046 1.352 4.461 66.786 57.798 LGA T 191 T 191 2.176 0 0.031 0.058 2.654 68.810 65.986 LGA G 192 G 192 2.263 0 0.000 0.000 2.263 64.762 64.762 LGA F 193 F 193 2.053 0 0.053 0.147 2.195 68.810 72.208 LGA F 194 F 194 1.001 0 0.000 1.273 5.558 81.429 63.160 LGA Q 195 Q 195 1.508 0 0.068 0.752 3.498 72.976 68.571 LGA S 196 S 196 2.543 0 0.075 0.708 5.254 60.952 53.333 LGA L 197 L 197 0.767 0 0.263 1.360 2.562 90.595 80.893 LGA N 198 N 198 3.161 0 0.442 0.923 9.407 54.167 32.024 LGA I 199 I 199 2.190 0 0.211 1.094 8.989 65.595 40.476 LGA S 200 S 200 2.179 0 0.090 0.135 3.457 73.095 65.397 LGA E 201 E 201 4.038 0 0.590 0.995 12.274 46.905 23.280 LGA T 202 T 202 4.529 0 0.176 1.214 7.738 34.762 24.694 LGA Q 203 Q 203 7.077 0 0.155 1.215 14.449 15.476 7.037 LGA I 204 I 204 5.719 0 0.000 0.120 10.821 30.476 17.024 LGA K 205 K 205 4.353 0 0.063 1.435 12.817 40.357 20.159 LGA S 206 S 206 6.713 0 0.567 0.746 10.323 17.024 11.825 LGA C 207 C 207 7.206 0 0.462 0.438 10.623 13.690 9.603 LGA I 208 I 208 3.914 0 0.251 0.282 4.786 46.905 40.655 LGA S 209 S 209 1.469 0 0.098 0.116 1.920 83.810 81.587 LGA I 210 I 210 0.477 0 0.069 0.213 2.204 97.619 85.298 LGA I 211 I 211 1.449 0 0.032 0.144 2.681 79.286 70.119 LGA D 212 D 212 2.019 0 0.090 0.134 3.873 68.810 60.417 LGA N 213 N 213 1.725 0 0.074 0.103 2.762 79.286 71.131 LGA L 214 L 214 0.689 0 0.047 0.124 1.318 90.595 89.405 LGA E 215 E 215 1.920 0 0.250 0.422 2.719 66.905 70.212 LGA K 216 K 216 2.257 0 0.109 0.985 4.171 62.857 59.206 LGA I 217 I 217 1.379 0 0.700 0.551 2.113 81.548 78.333 LGA G 218 G 218 2.880 0 0.057 0.057 3.049 65.357 65.357 LGA E 219 E 219 1.279 0 0.062 0.562 2.673 86.190 75.238 LGA A 220 A 220 1.087 0 0.063 0.070 1.823 83.690 81.524 LGA K 221 K 221 1.237 0 0.033 0.248 1.782 85.952 80.582 LGA V 222 V 222 0.185 0 0.000 0.130 1.121 92.857 91.905 LGA K 223 K 223 1.175 0 0.039 0.278 1.806 81.548 81.481 LGA L 224 L 224 1.817 0 0.037 0.183 2.337 72.976 69.881 LGA E 225 E 225 1.773 0 0.034 0.124 2.363 70.833 69.259 LGA L 226 L 226 2.022 0 0.000 0.079 2.727 64.881 68.869 LGA E 227 E 227 2.555 0 0.038 0.939 5.041 59.048 49.418 LGA K 228 K 228 2.851 0 0.080 0.520 3.369 55.357 57.196 LGA E 229 E 229 2.887 0 0.215 0.882 5.495 59.048 45.820 LGA G 230 G 230 3.371 0 0.073 0.073 3.521 48.333 48.333 LGA I 231 I 231 3.106 0 0.014 0.641 3.791 53.571 50.119 LGA N 232 N 232 2.918 0 0.071 1.262 3.511 60.952 62.202 LGA P 233 P 233 1.574 0 0.052 0.050 2.023 70.833 71.769 LGA E 234 E 234 2.480 0 0.055 0.367 3.175 60.952 58.889 LGA Q 235 Q 235 3.310 0 0.089 0.651 6.091 55.476 39.630 LGA T 236 T 236 1.507 0 0.016 0.026 2.151 75.119 77.891 LGA Q 237 Q 237 2.047 0 0.063 1.203 5.870 64.881 58.413 LGA K 238 K 238 3.113 0 0.000 0.127 4.522 53.571 46.614 LGA I 239 I 239 2.211 0 0.011 0.070 2.964 68.810 64.881 LGA I 240 I 240 1.610 0 0.056 1.070 2.832 69.048 70.179 LGA D 241 D 241 3.366 0 0.022 0.163 4.177 50.119 45.179 LGA F 242 F 242 2.993 0 0.131 1.173 7.189 57.143 40.996 LGA V 243 V 243 2.255 0 0.022 0.051 2.763 60.952 68.503 LGA K 244 K 244 3.488 0 0.293 0.629 5.214 42.619 50.741 LGA I 245 I 245 5.055 0 0.111 1.303 8.907 44.524 26.310 LGA D 246 D 246 2.029 0 0.224 0.966 3.357 63.095 61.131 LGA G 247 G 247 2.874 0 0.058 0.058 3.040 57.262 57.262 LGA S 248 S 248 4.112 0 0.006 0.060 5.319 41.786 37.460 LGA V 249 V 249 3.950 0 0.101 0.256 4.280 40.238 38.912 LGA D 250 D 250 4.886 0 0.077 0.226 7.510 31.429 24.107 LGA D 251 D 251 5.286 0 0.619 1.273 7.858 36.190 24.464 LGA V 252 V 252 5.635 0 0.554 0.526 7.812 23.929 17.619 LGA L 253 L 253 8.078 0 0.071 1.039 12.943 7.976 4.048 LGA D 254 D 254 5.866 0 0.203 0.211 6.919 21.548 22.321 LGA K 255 K 255 4.430 0 0.557 1.349 6.760 30.357 32.698 LGA L 256 L 256 9.324 0 0.200 0.226 14.328 2.262 1.131 LGA K 257 K 257 10.493 0 0.620 0.519 13.837 0.952 0.423 LGA H 258 H 258 10.139 0 0.041 0.120 12.119 3.690 1.476 LGA L 259 L 259 6.577 0 0.595 1.328 10.203 23.810 13.929 LGA S 260 S 260 3.833 0 0.530 0.828 5.332 35.952 34.524 LGA Q 261 Q 261 6.536 0 0.601 1.432 14.125 17.976 8.148 LGA T 262 T 262 8.742 0 0.497 1.403 10.584 3.333 2.517 LGA L 263 L 263 11.158 0 0.402 0.979 15.695 0.833 0.417 LGA P 264 P 264 8.635 0 0.260 0.539 11.499 5.357 3.129 LGA E 265 E 265 10.810 0 0.505 0.850 16.894 0.119 0.053 LGA S 266 S 266 13.223 0 0.160 0.582 15.411 0.000 0.000 LGA E 267 E 267 14.537 4 0.557 0.516 15.402 0.000 0.000 LGA Q 268 Q 268 17.365 0 0.519 1.079 26.812 0.000 0.000 LGA F 269 F 269 12.513 0 0.577 1.322 14.492 0.000 0.000 LGA N 270 N 270 8.258 0 0.522 0.693 9.964 7.381 6.131 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 82 328 328 100.00 644 644 100.00 82 SUMMARY(RMSD_GDC): 5.337 5.154 6.229 49.502 44.563 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 82 82 4.0 58 2.59 60.366 55.497 2.153 LGA_LOCAL RMSD: 2.594 Number of atoms: 58 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 5.482 Number of assigned atoms: 82 Std_ASGN_ATOMS RMSD: 5.337 Standard rmsd on all 82 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.503099 * X + -0.518189 * Y + 0.691644 * Z + -7.591666 Y_new = 0.801588 * X + 0.578927 * Y + -0.149332 * Z + 11.297750 Z_new = -0.323029 * X + 0.629542 * Y + 0.706632 * Z + 125.441666 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.010310 0.328928 0.727768 [DEG: 57.8865 18.8462 41.6980 ] ZXZ: 1.358151 0.786069 -0.474086 [DEG: 77.8163 45.0385 -27.1631 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0589TS173_1-D2 REMARK 2: T0589-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0589TS173_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 82 82 4.0 58 2.59 55.497 5.34 REMARK ---------------------------------------------------------- MOLECULE T0589TS173_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0589 REMARK MODEL 1 REMARK PARENT N/A ATOM 2916 N VAL 189 20.265 25.330 189.117 1.00 0.00 N ATOM 2917 CA VAL 189 21.208 25.772 188.097 1.00 0.00 C ATOM 2918 C VAL 189 22.536 25.038 188.221 1.00 0.00 C ATOM 2919 O VAL 189 23.124 24.627 187.220 1.00 0.00 O ATOM 2920 CB VAL 189 21.461 27.290 188.180 1.00 0.00 C ATOM 2921 CG1 VAL 189 22.597 27.692 187.251 1.00 0.00 C ATOM 2922 CG2 VAL 189 20.196 28.060 187.836 1.00 0.00 C ATOM 2932 N LEU 190 23.006 24.878 189.453 1.00 0.00 N ATOM 2933 CA LEU 190 24.230 24.132 189.715 1.00 0.00 C ATOM 2934 C LEU 190 24.134 22.709 189.180 1.00 0.00 C ATOM 2935 O LEU 190 25.021 22.242 188.466 1.00 0.00 O ATOM 2936 CB LEU 190 24.531 24.117 191.218 1.00 0.00 C ATOM 2937 CG LEU 190 25.024 25.449 191.799 1.00 0.00 C ATOM 2938 CD1 LEU 190 24.974 25.406 193.320 1.00 0.00 C ATOM 2939 CD2 LEU 190 26.440 25.723 191.313 1.00 0.00 C ATOM 2951 N THR 191 23.050 22.023 189.529 1.00 0.00 N ATOM 2952 CA THR 191 22.869 20.629 189.144 1.00 0.00 C ATOM 2953 C THR 191 22.689 20.493 187.637 1.00 0.00 C ATOM 2954 O THR 191 23.317 19.646 187.001 1.00 0.00 O ATOM 2955 CB THR 191 21.655 20.000 189.854 1.00 0.00 C ATOM 2956 OG1 THR 191 21.870 20.011 191.271 1.00 0.00 O ATOM 2957 CG2 THR 191 21.448 18.568 189.387 1.00 0.00 C ATOM 2965 N GLY 192 21.829 21.333 187.070 1.00 0.00 N ATOM 2966 CA GLY 192 21.515 21.264 185.649 1.00 0.00 C ATOM 2967 C GLY 192 22.752 21.525 184.799 1.00 0.00 C ATOM 2968 O GLY 192 23.025 20.798 183.843 1.00 0.00 O ATOM 2970 HA2 GLY 192 21.129 20.272 185.417 1.00 0.00 H ATOM 2971 HA3 GLY 192 20.759 22.012 185.414 1.00 0.00 H ATOM 2972 N PHE 193 23.498 22.567 185.150 1.00 0.00 N ATOM 2973 CA PHE 193 24.693 22.941 184.405 1.00 0.00 C ATOM 2974 C PHE 193 25.707 21.803 184.382 1.00 0.00 C ATOM 2975 O PHE 193 26.145 21.371 183.316 1.00 0.00 O ATOM 2976 CB PHE 193 25.325 24.198 185.006 1.00 0.00 C ATOM 2977 CG PHE 193 26.661 24.545 184.414 1.00 0.00 C ATOM 2978 CD1 PHE 193 26.756 25.051 183.126 1.00 0.00 C ATOM 2979 CD2 PHE 193 27.827 24.368 185.144 1.00 0.00 C ATOM 2980 CE1 PHE 193 27.984 25.371 182.580 1.00 0.00 C ATOM 2981 CE2 PHE 193 29.056 24.688 184.601 1.00 0.00 C ATOM 2982 CZ PHE 193 29.134 25.190 183.318 1.00 0.00 C ATOM 2992 N PHE 194 26.075 21.323 185.565 1.00 0.00 N ATOM 2993 CA PHE 194 27.091 20.282 185.686 1.00 0.00 C ATOM 2994 C PHE 194 26.619 18.976 185.063 1.00 0.00 C ATOM 2995 O PHE 194 27.398 18.263 184.428 1.00 0.00 O ATOM 2996 CB PHE 194 27.457 20.062 187.155 1.00 0.00 C ATOM 2997 CG PHE 194 28.507 19.009 187.366 1.00 0.00 C ATOM 2998 CD1 PHE 194 29.806 19.205 186.920 1.00 0.00 C ATOM 2999 CD2 PHE 194 28.200 17.821 188.012 1.00 0.00 C ATOM 3000 CE1 PHE 194 30.773 18.237 187.114 1.00 0.00 C ATOM 3001 CE2 PHE 194 29.165 16.852 188.207 1.00 0.00 C ATOM 3002 CZ PHE 194 30.453 17.060 187.757 1.00 0.00 C ATOM 3012 N GLN 195 25.340 18.666 185.246 1.00 0.00 N ATOM 3013 CA GLN 195 24.753 17.462 184.671 1.00 0.00 C ATOM 3014 C GLN 195 24.929 17.431 183.158 1.00 0.00 C ATOM 3015 O GLN 195 25.328 16.415 182.590 1.00 0.00 O ATOM 3016 CB GLN 195 23.266 17.370 185.021 1.00 0.00 C ATOM 3017 CG GLN 195 22.573 16.132 184.477 1.00 0.00 C ATOM 3018 CD GLN 195 21.109 16.069 184.869 1.00 0.00 C ATOM 3019 OE1 GLN 195 20.574 17.000 185.477 1.00 0.00 O ATOM 3020 NE2 GLN 195 20.453 14.966 184.526 1.00 0.00 N ATOM 3029 N SER 196 24.626 18.550 182.509 1.00 0.00 N ATOM 3030 CA SER 196 24.724 18.645 181.058 1.00 0.00 C ATOM 3031 C SER 196 26.174 18.767 180.610 1.00 0.00 C ATOM 3032 O SER 196 26.547 18.284 179.540 1.00 0.00 O ATOM 3033 CB SER 196 23.916 19.826 180.556 1.00 0.00 C ATOM 3034 OG SER 196 22.544 19.664 180.794 1.00 0.00 O ATOM 3040 N LEU 197 26.991 19.415 181.435 1.00 0.00 N ATOM 3041 CA LEU 197 28.400 19.617 181.116 1.00 0.00 C ATOM 3042 C LEU 197 29.168 18.303 181.163 1.00 0.00 C ATOM 3043 O LEU 197 29.750 17.877 180.164 1.00 0.00 O ATOM 3044 CB LEU 197 29.022 20.634 182.081 1.00 0.00 C ATOM 3045 CG LEU 197 30.540 20.809 181.954 1.00 0.00 C ATOM 3046 CD1 LEU 197 30.891 21.340 180.571 1.00 0.00 C ATOM 3047 CD2 LEU 197 31.034 21.758 183.037 1.00 0.00 C ATOM 3059 N ASN 198 29.169 17.665 182.329 1.00 0.00 N ATOM 3060 CA ASN 198 29.919 16.430 182.525 1.00 0.00 C ATOM 3061 C ASN 198 29.183 15.483 183.464 1.00 0.00 C ATOM 3062 O ASN 198 29.055 15.751 184.659 1.00 0.00 O ATOM 3063 CB ASN 198 31.317 16.707 183.049 1.00 0.00 C ATOM 3064 CG ASN 198 32.162 15.473 183.201 1.00 0.00 C ATOM 3065 OD1 ASN 198 32.422 14.752 182.230 1.00 0.00 O ATOM 3066 ND2 ASN 198 32.523 15.183 184.425 1.00 0.00 N ATOM 3073 N ILE 199 28.700 14.372 182.917 1.00 0.00 N ATOM 3074 CA ILE 199 28.003 13.368 183.710 1.00 0.00 C ATOM 3075 C ILE 199 28.976 12.570 184.570 1.00 0.00 C ATOM 3076 O ILE 199 29.676 11.687 184.075 1.00 0.00 O ATOM 3077 CB ILE 199 27.206 12.398 182.819 1.00 0.00 C ATOM 3078 CG1 ILE 199 26.136 13.156 182.028 1.00 0.00 C ATOM 3079 CG2 ILE 199 26.572 11.301 183.661 1.00 0.00 C ATOM 3080 CD1 ILE 199 25.432 12.313 180.991 1.00 0.00 C ATOM 3092 N SER 200 29.016 12.889 185.859 1.00 0.00 N ATOM 3093 CA SER 200 29.980 12.281 186.769 1.00 0.00 C ATOM 3094 C SER 200 29.593 12.520 188.223 1.00 0.00 C ATOM 3095 O SER 200 28.619 13.216 188.508 1.00 0.00 O ATOM 3096 CB SER 200 31.370 12.824 186.497 1.00 0.00 C ATOM 3097 OG SER 200 31.457 14.199 186.754 1.00 0.00 O ATOM 3103 N GLU 201 30.361 11.940 189.137 1.00 0.00 N ATOM 3104 CA GLU 201 30.041 12.001 190.558 1.00 0.00 C ATOM 3105 C GLU 201 29.885 13.443 191.026 1.00 0.00 C ATOM 3106 O GLU 201 30.862 14.189 191.104 1.00 0.00 O ATOM 3107 CB GLU 201 31.119 11.295 191.382 1.00 0.00 C ATOM 3108 CG GLU 201 30.816 11.205 192.871 1.00 0.00 C ATOM 3109 CD GLU 201 31.826 10.351 193.584 1.00 0.00 C ATOM 3110 OE1 GLU 201 32.674 9.793 192.928 1.00 0.00 O ATOM 3111 OE2 GLU 201 31.823 10.344 194.793 1.00 0.00 O ATOM 3118 N THR 202 28.652 13.830 191.334 1.00 0.00 N ATOM 3119 CA THR 202 28.363 15.189 191.775 1.00 0.00 C ATOM 3120 C THR 202 28.831 15.416 193.206 1.00 0.00 C ATOM 3121 O THR 202 28.868 16.550 193.686 1.00 0.00 O ATOM 3122 CB THR 202 26.860 15.508 191.681 1.00 0.00 C ATOM 3123 OG1 THR 202 26.131 14.652 192.570 1.00 0.00 O ATOM 3124 CG2 THR 202 26.358 15.301 190.260 1.00 0.00 C ATOM 3132 N GLN 203 29.187 14.331 193.885 1.00 0.00 N ATOM 3133 CA GLN 203 29.582 14.401 195.288 1.00 0.00 C ATOM 3134 C GLN 203 31.001 14.934 195.435 1.00 0.00 C ATOM 3135 O GLN 203 31.463 15.198 196.546 1.00 0.00 O ATOM 3136 CB GLN 203 29.478 13.021 195.943 1.00 0.00 C ATOM 3137 CG GLN 203 28.071 12.449 195.971 1.00 0.00 C ATOM 3138 CD GLN 203 27.114 13.308 196.777 1.00 0.00 C ATOM 3139 OE1 GLN 203 27.426 13.732 197.892 1.00 0.00 O ATOM 3140 NE2 GLN 203 25.937 13.565 196.216 1.00 0.00 N ATOM 3149 N ILE 204 31.687 15.093 194.309 1.00 0.00 N ATOM 3150 CA ILE 204 33.054 15.602 194.309 1.00 0.00 C ATOM 3151 C ILE 204 33.102 17.047 193.826 1.00 0.00 C ATOM 3152 O ILE 204 33.597 17.930 194.527 1.00 0.00 O ATOM 3153 CB ILE 204 33.978 14.744 193.426 1.00 0.00 C ATOM 3154 CG1 ILE 204 34.058 13.314 193.969 1.00 0.00 C ATOM 3155 CG2 ILE 204 35.364 15.365 193.346 1.00 0.00 C ATOM 3156 CD1 ILE 204 34.801 12.359 193.064 1.00 0.00 C ATOM 3168 N LYS 205 32.585 17.281 192.625 1.00 0.00 N ATOM 3169 CA LYS 205 32.757 18.564 191.954 1.00 0.00 C ATOM 3170 C LYS 205 31.779 19.603 192.489 1.00 0.00 C ATOM 3171 O LYS 205 32.185 20.639 193.014 1.00 0.00 O ATOM 3172 CB LYS 205 32.581 18.405 190.443 1.00 0.00 C ATOM 3173 CG LYS 205 32.955 19.641 189.634 1.00 0.00 C ATOM 3174 CD LYS 205 31.841 20.678 189.661 1.00 0.00 C ATOM 3175 CE LYS 205 32.160 21.856 188.752 1.00 0.00 C ATOM 3176 NZ LYS 205 31.086 22.887 188.780 1.00 0.00 N ATOM 3190 N SER 206 30.488 19.317 192.356 1.00 0.00 N ATOM 3191 CA SER 206 29.457 20.333 192.528 1.00 0.00 C ATOM 3192 C SER 206 29.451 20.875 193.953 1.00 0.00 C ATOM 3193 O SER 206 28.872 20.269 194.855 1.00 0.00 O ATOM 3194 CB SER 206 28.098 19.762 192.174 1.00 0.00 C ATOM 3195 OG SER 206 27.072 20.702 192.340 1.00 0.00 O ATOM 3201 N CYS 207 30.097 22.019 194.148 1.00 0.00 N ATOM 3202 CA CYS 207 30.061 22.710 195.431 1.00 0.00 C ATOM 3203 C CYS 207 30.273 21.738 196.585 1.00 0.00 C ATOM 3204 O CYS 207 29.473 21.685 197.520 1.00 0.00 O ATOM 3205 CB CYS 207 28.646 23.286 195.466 1.00 0.00 C ATOM 3206 SG CYS 207 28.332 24.576 194.236 1.00 0.00 S ATOM 3212 N ILE 208 31.355 20.969 196.514 1.00 0.00 N ATOM 3213 CA ILE 208 31.778 20.137 197.634 1.00 0.00 C ATOM 3214 C ILE 208 33.296 20.072 197.731 1.00 0.00 C ATOM 3215 O ILE 208 33.923 20.917 198.369 1.00 0.00 O ATOM 3216 CB ILE 208 31.218 18.707 197.516 1.00 0.00 C ATOM 3217 CG1 ILE 208 29.688 18.732 197.507 1.00 0.00 C ATOM 3218 CG2 ILE 208 31.733 17.839 198.654 1.00 0.00 C ATOM 3219 CD1 ILE 208 29.057 17.387 197.225 1.00 0.00 C ATOM 3231 N SER 209 33.884 19.065 197.093 1.00 0.00 N ATOM 3232 CA SER 209 35.275 18.708 197.340 1.00 0.00 C ATOM 3233 C SER 209 36.222 19.620 196.570 1.00 0.00 C ATOM 3234 O SER 209 37.115 20.234 197.151 1.00 0.00 O ATOM 3235 CB SER 209 35.516 17.258 196.965 1.00 0.00 C ATOM 3236 OG SER 209 36.843 16.870 197.192 1.00 0.00 O ATOM 3242 N ILE 210 36.021 19.701 195.260 1.00 0.00 N ATOM 3243 CA ILE 210 36.876 20.516 194.403 1.00 0.00 C ATOM 3244 C ILE 210 36.737 21.995 194.736 1.00 0.00 C ATOM 3245 O ILE 210 37.687 22.766 194.589 1.00 0.00 O ATOM 3246 CB ILE 210 36.551 20.301 192.913 1.00 0.00 C ATOM 3247 CG1 ILE 210 36.957 18.892 192.474 1.00 0.00 C ATOM 3248 CG2 ILE 210 37.250 21.349 192.061 1.00 0.00 C ATOM 3249 CD1 ILE 210 36.490 18.526 191.085 1.00 0.00 C ATOM 3261 N ILE 211 35.550 22.388 195.183 1.00 0.00 N ATOM 3262 CA ILE 211 35.277 23.783 195.508 1.00 0.00 C ATOM 3263 C ILE 211 35.836 24.151 196.876 1.00 0.00 C ATOM 3264 O ILE 211 36.380 25.240 197.062 1.00 0.00 O ATOM 3265 CB ILE 211 33.767 24.083 195.482 1.00 0.00 C ATOM 3266 CG1 ILE 211 33.187 23.786 194.098 1.00 0.00 C ATOM 3267 CG2 ILE 211 33.505 25.530 195.873 1.00 0.00 C ATOM 3268 CD1 ILE 211 33.874 24.527 192.975 1.00 0.00 C ATOM 3280 N ASP 212 35.698 23.238 197.830 1.00 0.00 N ATOM 3281 CA ASP 212 36.319 23.398 199.140 1.00 0.00 C ATOM 3282 C ASP 212 37.834 23.504 199.021 1.00 0.00 C ATOM 3283 O ASP 212 38.473 24.246 199.768 1.00 0.00 O ATOM 3284 CB ASP 212 35.945 22.231 200.057 1.00 0.00 C ATOM 3285 CG ASP 212 36.518 22.329 201.465 1.00 0.00 C ATOM 3286 OD1 ASP 212 36.218 23.283 202.142 1.00 0.00 O ATOM 3287 OD2 ASP 212 37.119 21.379 201.907 1.00 0.00 O ATOM 3292 N ASN 213 38.403 22.759 198.079 1.00 0.00 N ATOM 3293 CA ASN 213 39.847 22.752 197.877 1.00 0.00 C ATOM 3294 C ASN 213 40.311 24.018 197.171 1.00 0.00 C ATOM 3295 O ASN 213 41.510 24.259 197.031 1.00 0.00 O ATOM 3296 CB ASN 213 40.291 21.526 197.102 1.00 0.00 C ATOM 3297 CG ASN 213 40.223 20.250 197.894 1.00 0.00 C ATOM 3298 OD1 ASN 213 40.196 20.264 199.130 1.00 0.00 O ATOM 3299 ND2 ASN 213 40.278 19.146 197.194 1.00 0.00 N ATOM 3306 N LEU 214 39.354 24.826 196.725 1.00 0.00 N ATOM 3307 CA LEU 214 39.663 26.049 195.993 1.00 0.00 C ATOM 3308 C LEU 214 40.675 26.902 196.746 1.00 0.00 C ATOM 3309 O LEU 214 41.575 27.489 196.146 1.00 0.00 O ATOM 3310 CB LEU 214 38.380 26.847 195.731 1.00 0.00 C ATOM 3311 CG LEU 214 38.565 28.124 194.901 1.00 0.00 C ATOM 3312 CD1 LEU 214 39.036 27.770 193.497 1.00 0.00 C ATOM 3313 CD2 LEU 214 37.253 28.893 194.852 1.00 0.00 C ATOM 3325 N GLU 215 40.522 26.967 198.064 1.00 0.00 N ATOM 3326 CA GLU 215 41.365 27.821 198.892 1.00 0.00 C ATOM 3327 C GLU 215 42.386 26.999 199.669 1.00 0.00 C ATOM 3328 O GLU 215 43.011 27.493 200.607 1.00 0.00 O ATOM 3329 CB GLU 215 40.510 28.643 199.859 1.00 0.00 C ATOM 3330 CG GLU 215 39.565 29.625 199.181 1.00 0.00 C ATOM 3331 CD GLU 215 38.755 30.391 200.190 1.00 0.00 C ATOM 3332 OE1 GLU 215 38.975 30.206 201.364 1.00 0.00 O ATOM 3333 OE2 GLU 215 37.996 31.242 199.791 1.00 0.00 O ATOM 3340 N LYS 216 42.551 25.741 199.272 1.00 0.00 N ATOM 3341 CA LYS 216 43.461 24.833 199.961 1.00 0.00 C ATOM 3342 C LYS 216 44.587 24.380 199.039 1.00 0.00 C ATOM 3343 O LYS 216 45.680 24.048 199.498 1.00 0.00 O ATOM 3344 CB LYS 216 42.701 23.620 200.500 1.00 0.00 C ATOM 3345 CG LYS 216 41.678 23.947 201.580 1.00 0.00 C ATOM 3346 CD LYS 216 40.961 22.694 202.060 1.00 0.00 C ATOM 3347 CE LYS 216 40.032 23.000 203.226 1.00 0.00 C ATOM 3348 NZ LYS 216 39.296 21.790 203.684 1.00 0.00 N ATOM 3362 N ILE 217 44.312 24.366 197.741 1.00 0.00 N ATOM 3363 CA ILE 217 45.331 24.050 196.746 1.00 0.00 C ATOM 3364 C ILE 217 45.429 25.145 195.691 1.00 0.00 C ATOM 3365 O ILE 217 44.565 26.018 195.607 1.00 0.00 O ATOM 3366 CB ILE 217 45.044 22.705 196.052 1.00 0.00 C ATOM 3367 CG1 ILE 217 43.691 22.751 195.337 1.00 0.00 C ATOM 3368 CG2 ILE 217 45.079 21.568 197.061 1.00 0.00 C ATOM 3369 CD1 ILE 217 43.408 21.534 194.486 1.00 0.00 C ATOM 3381 N GLY 218 46.486 25.091 194.888 1.00 0.00 N ATOM 3382 CA GLY 218 46.760 26.139 193.912 1.00 0.00 C ATOM 3383 C GLY 218 45.678 26.189 192.841 1.00 0.00 C ATOM 3384 O GLY 218 44.942 25.223 192.642 1.00 0.00 O ATOM 3386 HA2 GLY 218 46.798 27.101 194.424 1.00 0.00 H ATOM 3387 HA3 GLY 218 47.721 25.942 193.438 1.00 0.00 H ATOM 3388 N GLU 219 45.588 27.321 192.150 1.00 0.00 N ATOM 3389 CA GLU 219 44.569 27.516 191.126 1.00 0.00 C ATOM 3390 C GLU 219 44.701 26.482 190.015 1.00 0.00 C ATOM 3391 O GLU 219 43.713 25.883 189.591 1.00 0.00 O ATOM 3392 CB GLU 219 44.656 28.928 190.544 1.00 0.00 C ATOM 3393 CG GLU 219 43.565 29.261 189.535 1.00 0.00 C ATOM 3394 CD GLU 219 43.735 30.650 188.986 1.00 0.00 C ATOM 3395 OE1 GLU 219 43.782 31.574 189.762 1.00 0.00 O ATOM 3396 OE2 GLU 219 43.930 30.778 187.800 1.00 0.00 O ATOM 3403 N ALA 220 45.927 26.279 189.547 1.00 0.00 N ATOM 3404 CA ALA 220 46.194 25.303 188.497 1.00 0.00 C ATOM 3405 C ALA 220 45.829 23.894 188.947 1.00 0.00 C ATOM 3406 O ALA 220 45.354 23.081 188.155 1.00 0.00 O ATOM 3407 CB ALA 220 47.654 25.366 188.073 1.00 0.00 C ATOM 3413 N LYS 221 46.054 23.610 190.226 1.00 0.00 N ATOM 3414 CA LYS 221 45.739 22.302 190.787 1.00 0.00 C ATOM 3415 C LYS 221 44.237 22.060 190.809 1.00 0.00 C ATOM 3416 O LYS 221 43.774 20.945 190.566 1.00 0.00 O ATOM 3417 CB LYS 221 46.313 22.172 192.199 1.00 0.00 C ATOM 3418 CG LYS 221 47.834 22.100 192.255 1.00 0.00 C ATOM 3419 CD LYS 221 48.326 21.919 193.683 1.00 0.00 C ATOM 3420 CE LYS 221 49.846 21.870 193.744 1.00 0.00 C ATOM 3421 NZ LYS 221 50.342 21.707 195.137 1.00 0.00 N ATOM 3435 N VAL 222 43.475 23.110 191.099 1.00 0.00 N ATOM 3436 CA VAL 222 42.021 23.044 191.038 1.00 0.00 C ATOM 3437 C VAL 222 41.540 22.783 189.617 1.00 0.00 C ATOM 3438 O VAL 222 40.618 21.999 189.396 1.00 0.00 O ATOM 3439 CB VAL 222 41.374 24.341 191.558 1.00 0.00 C ATOM 3440 CG1 VAL 222 39.872 24.318 191.320 1.00 0.00 C ATOM 3441 CG2 VAL 222 41.674 24.530 193.038 1.00 0.00 C ATOM 3451 N LYS 223 42.173 23.444 188.653 1.00 0.00 N ATOM 3452 CA LYS 223 41.870 23.223 187.245 1.00 0.00 C ATOM 3453 C LYS 223 42.140 21.778 186.844 1.00 0.00 C ATOM 3454 O LYS 223 41.383 21.185 186.075 1.00 0.00 O ATOM 3455 CB LYS 223 42.684 24.173 186.366 1.00 0.00 C ATOM 3456 CG LYS 223 42.267 25.635 186.467 1.00 0.00 C ATOM 3457 CD LYS 223 43.146 26.523 185.598 1.00 0.00 C ATOM 3458 CE LYS 223 42.743 27.985 185.713 1.00 0.00 C ATOM 3459 NZ LYS 223 43.676 28.879 184.974 1.00 0.00 N ATOM 3473 N LEU 224 43.222 21.215 187.371 1.00 0.00 N ATOM 3474 CA LEU 224 43.570 19.825 187.103 1.00 0.00 C ATOM 3475 C LEU 224 42.522 18.876 187.670 1.00 0.00 C ATOM 3476 O LEU 224 42.184 17.868 187.051 1.00 0.00 O ATOM 3477 CB LEU 224 44.952 19.504 187.686 1.00 0.00 C ATOM 3478 CG LEU 224 46.135 20.155 186.958 1.00 0.00 C ATOM 3479 CD1 LEU 224 47.418 19.941 187.750 1.00 0.00 C ATOM 3480 CD2 LEU 224 46.259 19.565 185.560 1.00 0.00 C ATOM 3492 N GLU 225 42.012 19.204 188.853 1.00 0.00 N ATOM 3493 CA GLU 225 40.980 18.396 189.493 1.00 0.00 C ATOM 3494 C GLU 225 39.690 18.409 188.685 1.00 0.00 C ATOM 3495 O GLU 225 39.001 17.393 188.578 1.00 0.00 O ATOM 3496 CB GLU 225 40.714 18.896 190.914 1.00 0.00 C ATOM 3497 CG GLU 225 41.850 18.637 191.895 1.00 0.00 C ATOM 3498 CD GLU 225 42.196 17.175 191.956 1.00 0.00 C ATOM 3499 OE1 GLU 225 41.302 16.378 192.114 1.00 0.00 O ATOM 3500 OE2 GLU 225 43.337 16.846 191.734 1.00 0.00 O ATOM 3507 N LEU 226 39.366 19.565 188.114 1.00 0.00 N ATOM 3508 CA LEU 226 38.201 19.690 187.246 1.00 0.00 C ATOM 3509 C LEU 226 38.378 18.882 185.967 1.00 0.00 C ATOM 3510 O LEU 226 37.428 18.277 185.470 1.00 0.00 O ATOM 3511 CB LEU 226 37.944 21.166 186.914 1.00 0.00 C ATOM 3512 CG LEU 226 37.458 22.024 188.088 1.00 0.00 C ATOM 3513 CD1 LEU 226 37.489 23.498 187.706 1.00 0.00 C ATOM 3514 CD2 LEU 226 36.051 21.598 188.481 1.00 0.00 C ATOM 3526 N GLU 227 39.597 18.875 185.440 1.00 0.00 N ATOM 3527 CA GLU 227 39.920 18.072 184.268 1.00 0.00 C ATOM 3528 C GLU 227 39.857 16.583 184.585 1.00 0.00 C ATOM 3529 O GLU 227 39.466 15.775 183.743 1.00 0.00 O ATOM 3530 CB GLU 227 41.307 18.437 183.734 1.00 0.00 C ATOM 3531 CG GLU 227 41.381 19.796 183.054 1.00 0.00 C ATOM 3532 CD GLU 227 42.794 20.141 182.675 1.00 0.00 C ATOM 3533 OE1 GLU 227 43.677 19.382 182.994 1.00 0.00 O ATOM 3534 OE2 GLU 227 42.980 21.105 181.969 1.00 0.00 O ATOM 3541 N LYS 228 40.243 16.227 185.804 1.00 0.00 N ATOM 3542 CA LYS 228 40.115 14.855 186.280 1.00 0.00 C ATOM 3543 C LYS 228 38.652 14.442 186.382 1.00 0.00 C ATOM 3544 O LYS 228 38.299 13.298 186.097 1.00 0.00 O ATOM 3545 CB LYS 228 40.804 14.689 187.635 1.00 0.00 C ATOM 3546 CG LYS 228 42.325 14.739 187.578 1.00 0.00 C ATOM 3547 CD LYS 228 42.934 14.671 188.969 1.00 0.00 C ATOM 3548 CE LYS 228 44.429 14.950 188.935 1.00 0.00 C ATOM 3549 NZ LYS 228 45.025 14.961 190.298 1.00 0.00 N ATOM 3563 N GLU 229 37.805 15.380 186.791 1.00 0.00 N ATOM 3564 CA GLU 229 36.369 15.139 186.860 1.00 0.00 C ATOM 3565 C GLU 229 35.791 14.859 185.479 1.00 0.00 C ATOM 3566 O GLU 229 34.857 14.071 185.334 1.00 0.00 O ATOM 3567 CB GLU 229 35.656 16.334 187.497 1.00 0.00 C ATOM 3568 CG GLU 229 34.180 16.102 187.791 1.00 0.00 C ATOM 3569 CD GLU 229 33.995 15.076 188.874 1.00 0.00 C ATOM 3570 OE1 GLU 229 34.960 14.734 189.514 1.00 0.00 O ATOM 3571 OE2 GLU 229 32.871 14.717 189.138 1.00 0.00 O ATOM 3578 N GLY 230 36.353 15.509 184.465 1.00 0.00 N ATOM 3579 CA GLY 230 35.968 15.251 183.082 1.00 0.00 C ATOM 3580 C GLY 230 35.590 16.541 182.367 1.00 0.00 C ATOM 3581 O GLY 230 35.030 16.514 181.271 1.00 0.00 O ATOM 3583 HA2 GLY 230 36.805 14.787 182.560 1.00 0.00 H ATOM 3584 HA3 GLY 230 35.114 14.576 183.071 1.00 0.00 H ATOM 3585 N ILE 231 35.899 17.672 182.993 1.00 0.00 N ATOM 3586 CA ILE 231 35.557 18.975 182.436 1.00 0.00 C ATOM 3587 C ILE 231 36.670 19.500 181.538 1.00 0.00 C ATOM 3588 O ILE 231 37.832 19.556 181.942 1.00 0.00 O ATOM 3589 CB ILE 231 35.273 20.007 183.543 1.00 0.00 C ATOM 3590 CG1 ILE 231 34.085 19.559 184.399 1.00 0.00 C ATOM 3591 CG2 ILE 231 35.013 21.378 182.939 1.00 0.00 C ATOM 3592 CD1 ILE 231 33.914 20.359 185.670 1.00 0.00 C ATOM 3604 N ASN 232 36.309 19.884 180.318 1.00 0.00 N ATOM 3605 CA ASN 232 37.283 20.373 179.350 1.00 0.00 C ATOM 3606 C ASN 232 37.972 21.635 179.852 1.00 0.00 C ATOM 3607 O ASN 232 37.402 22.398 180.629 1.00 0.00 O ATOM 3608 CB ASN 232 36.640 20.627 177.998 1.00 0.00 C ATOM 3609 CG ASN 232 36.266 19.372 177.259 1.00 0.00 C ATOM 3610 OD1 ASN 232 36.785 18.286 177.539 1.00 0.00 O ATOM 3611 ND2 ASN 232 35.432 19.531 176.263 1.00 0.00 N ATOM 3618 N PRO 233 39.205 21.847 179.402 1.00 0.00 N ATOM 3619 CA PRO 233 40.008 22.969 179.871 1.00 0.00 C ATOM 3620 C PRO 233 39.260 24.287 179.713 1.00 0.00 C ATOM 3621 O PRO 233 39.396 25.191 180.537 1.00 0.00 O ATOM 3622 CB PRO 233 41.270 22.916 179.004 1.00 0.00 C ATOM 3623 CG PRO 233 41.426 21.472 178.664 1.00 0.00 C ATOM 3624 CD PRO 233 40.024 20.947 178.505 1.00 0.00 C ATOM 3632 N GLU 234 38.471 24.390 178.650 1.00 0.00 N ATOM 3633 CA GLU 234 37.707 25.601 178.376 1.00 0.00 C ATOM 3634 C GLU 234 36.761 25.926 179.526 1.00 0.00 C ATOM 3635 O GLU 234 36.877 26.975 180.160 1.00 0.00 O ATOM 3636 CB GLU 234 36.919 25.456 177.072 1.00 0.00 C ATOM 3637 CG GLU 234 36.077 26.670 176.708 1.00 0.00 C ATOM 3638 CD GLU 234 35.307 26.439 175.438 1.00 0.00 C ATOM 3639 OE1 GLU 234 35.445 25.385 174.864 1.00 0.00 O ATOM 3640 OE2 GLU 234 34.495 27.268 175.100 1.00 0.00 O ATOM 3647 N GLN 235 35.826 25.020 179.791 1.00 0.00 N ATOM 3648 CA GLN 235 34.861 25.208 180.867 1.00 0.00 C ATOM 3649 C GLN 235 35.539 25.161 182.229 1.00 0.00 C ATOM 3650 O GLN 235 35.030 25.710 183.206 1.00 0.00 O ATOM 3651 CB GLN 235 33.766 24.139 180.798 1.00 0.00 C ATOM 3652 CG GLN 235 32.841 24.273 179.600 1.00 0.00 C ATOM 3653 CD GLN 235 33.332 23.488 178.398 1.00 0.00 C ATOM 3654 OE1 GLN 235 34.539 23.313 178.205 1.00 0.00 O ATOM 3655 NE2 GLN 235 32.400 23.015 177.580 1.00 0.00 N ATOM 3664 N THR 236 36.691 24.502 182.289 1.00 0.00 N ATOM 3665 CA THR 236 37.473 24.435 183.519 1.00 0.00 C ATOM 3666 C THR 236 37.912 25.822 183.968 1.00 0.00 C ATOM 3667 O THR 236 37.731 26.196 185.127 1.00 0.00 O ATOM 3668 CB THR 236 38.718 23.545 183.350 1.00 0.00 C ATOM 3669 OG1 THR 236 38.310 22.189 183.122 1.00 0.00 O ATOM 3670 CG2 THR 236 39.590 23.605 184.594 1.00 0.00 C ATOM 3678 N GLN 237 38.491 26.583 183.045 1.00 0.00 N ATOM 3679 CA GLN 237 38.954 27.932 183.345 1.00 0.00 C ATOM 3680 C GLN 237 37.783 28.867 183.626 1.00 0.00 C ATOM 3681 O GLN 237 37.888 29.777 184.448 1.00 0.00 O ATOM 3682 CB GLN 237 39.786 28.483 182.184 1.00 0.00 C ATOM 3683 CG GLN 237 41.141 27.814 182.017 1.00 0.00 C ATOM 3684 CD GLN 237 41.892 28.324 180.801 1.00 0.00 C ATOM 3685 OE1 GLN 237 41.374 29.136 180.030 1.00 0.00 O ATOM 3686 NE2 GLN 237 43.117 27.845 180.621 1.00 0.00 N ATOM 3695 N LYS 238 36.670 28.634 182.941 1.00 0.00 N ATOM 3696 CA LYS 238 35.462 29.424 183.150 1.00 0.00 C ATOM 3697 C LYS 238 34.895 29.203 184.547 1.00 0.00 C ATOM 3698 O LYS 238 34.594 30.157 185.263 1.00 0.00 O ATOM 3699 CB LYS 238 34.409 29.084 182.094 1.00 0.00 C ATOM 3700 CG LYS 238 34.759 29.544 180.686 1.00 0.00 C ATOM 3701 CD LYS 238 33.709 29.095 179.680 1.00 0.00 C ATOM 3702 CE LYS 238 34.090 29.501 178.264 1.00 0.00 C ATOM 3703 NZ LYS 238 33.062 29.083 177.270 1.00 0.00 N ATOM 3717 N ILE 239 34.749 27.938 184.927 1.00 0.00 N ATOM 3718 CA ILE 239 34.115 27.587 186.192 1.00 0.00 C ATOM 3719 C ILE 239 34.936 28.081 187.376 1.00 0.00 C ATOM 3720 O ILE 239 34.413 28.730 188.281 1.00 0.00 O ATOM 3721 CB ILE 239 33.912 26.066 186.319 1.00 0.00 C ATOM 3722 CG1 ILE 239 32.849 25.585 185.327 1.00 0.00 C ATOM 3723 CG2 ILE 239 33.522 25.699 187.742 1.00 0.00 C ATOM 3724 CD1 ILE 239 32.804 24.083 185.161 1.00 0.00 C ATOM 3736 N ILE 240 36.228 27.769 187.365 1.00 0.00 N ATOM 3737 CA ILE 240 37.114 28.133 188.464 1.00 0.00 C ATOM 3738 C ILE 240 37.092 29.635 188.715 1.00 0.00 C ATOM 3739 O ILE 240 37.251 30.087 189.848 1.00 0.00 O ATOM 3740 CB ILE 240 38.562 27.687 188.194 1.00 0.00 C ATOM 3741 CG1 ILE 240 39.397 27.777 189.474 1.00 0.00 C ATOM 3742 CG2 ILE 240 39.181 28.532 187.091 1.00 0.00 C ATOM 3743 CD1 ILE 240 40.753 27.119 189.366 1.00 0.00 C ATOM 3755 N ASP 241 36.894 30.404 187.650 1.00 0.00 N ATOM 3756 CA ASP 241 36.754 31.851 187.766 1.00 0.00 C ATOM 3757 C ASP 241 35.409 32.229 188.373 1.00 0.00 C ATOM 3758 O ASP 241 35.306 33.204 189.116 1.00 0.00 O ATOM 3759 CB ASP 241 36.919 32.516 186.397 1.00 0.00 C ATOM 3760 CG ASP 241 38.351 32.550 185.882 1.00 0.00 C ATOM 3761 OD1 ASP 241 39.245 32.279 186.649 1.00 0.00 O ATOM 3762 OD2 ASP 241 38.532 32.690 184.696 1.00 0.00 O ATOM 3767 N PHE 242 34.381 31.452 188.051 1.00 0.00 N ATOM 3768 CA PHE 242 33.031 31.734 188.521 1.00 0.00 C ATOM 3769 C PHE 242 32.904 31.478 190.017 1.00 0.00 C ATOM 3770 O PHE 242 32.047 32.056 190.685 1.00 0.00 O ATOM 3771 CB PHE 242 32.011 30.890 187.754 1.00 0.00 C ATOM 3772 CG PHE 242 31.942 31.207 186.288 1.00 0.00 C ATOM 3773 CD1 PHE 242 32.347 32.445 185.811 1.00 0.00 C ATOM 3774 CD2 PHE 242 31.473 30.267 185.381 1.00 0.00 C ATOM 3775 CE1 PHE 242 32.283 32.736 184.461 1.00 0.00 C ATOM 3776 CE2 PHE 242 31.411 30.556 184.032 1.00 0.00 C ATOM 3777 CZ PHE 242 31.816 31.793 183.572 1.00 0.00 C ATOM 3787 N VAL 243 33.763 30.609 190.538 1.00 0.00 N ATOM 3788 CA VAL 243 33.765 30.294 191.962 1.00 0.00 C ATOM 3789 C VAL 243 34.895 31.020 192.684 1.00 0.00 C ATOM 3790 O VAL 243 34.860 31.186 193.902 1.00 0.00 O ATOM 3791 CB VAL 243 33.902 28.780 192.207 1.00 0.00 C ATOM 3792 CG1 VAL 243 32.754 28.029 191.551 1.00 0.00 C ATOM 3793 CG2 VAL 243 35.238 28.274 191.683 1.00 0.00 C ATOM 3803 N LYS 244 35.897 31.449 191.922 1.00 0.00 N ATOM 3804 CA LYS 244 36.978 32.262 192.468 1.00 0.00 C ATOM 3805 C LYS 244 36.475 33.638 192.884 1.00 0.00 C ATOM 3806 O LYS 244 36.760 34.105 193.987 1.00 0.00 O ATOM 3807 CB LYS 244 38.109 32.402 191.446 1.00 0.00 C ATOM 3808 CG LYS 244 39.299 33.218 191.935 1.00 0.00 C ATOM 3809 CD LYS 244 40.400 33.270 190.887 1.00 0.00 C ATOM 3810 CE LYS 244 41.576 34.111 191.361 1.00 0.00 C ATOM 3811 NZ LYS 244 42.645 34.206 190.330 1.00 0.00 N ATOM 3825 N ILE 245 35.728 34.285 191.995 1.00 0.00 N ATOM 3826 CA ILE 245 35.164 35.598 192.280 1.00 0.00 C ATOM 3827 C ILE 245 33.674 35.636 191.968 1.00 0.00 C ATOM 3828 O ILE 245 33.165 34.806 191.214 1.00 0.00 O ATOM 3829 CB ILE 245 35.875 36.704 191.480 1.00 0.00 C ATOM 3830 CG1 ILE 245 35.734 36.450 189.977 1.00 0.00 C ATOM 3831 CG2 ILE 245 37.342 36.786 191.873 1.00 0.00 C ATOM 3832 CD1 ILE 245 36.214 37.597 189.116 1.00 0.00 C ATOM 3844 N ASP 246 32.976 36.605 192.552 1.00 0.00 N ATOM 3845 CA ASP 246 31.568 36.828 192.244 1.00 0.00 C ATOM 3846 C ASP 246 31.406 37.677 190.992 1.00 0.00 C ATOM 3847 O ASP 246 32.391 38.099 190.383 1.00 0.00 O ATOM 3848 CB ASP 246 30.860 37.494 193.426 1.00 0.00 C ATOM 3849 CG ASP 246 31.347 38.903 193.740 1.00 0.00 C ATOM 3850 OD1 ASP 246 31.884 39.534 192.859 1.00 0.00 O ATOM 3851 OD2 ASP 246 31.043 39.393 194.800 1.00 0.00 O ATOM 3856 N GLY 247 30.158 37.927 190.609 1.00 0.00 N ATOM 3857 CA GLY 247 29.865 38.690 189.401 1.00 0.00 C ATOM 3858 C GLY 247 28.477 39.310 189.466 1.00 0.00 C ATOM 3859 O GLY 247 27.758 39.147 190.452 1.00 0.00 O ATOM 3861 HA2 GLY 247 30.605 39.483 189.292 1.00 0.00 H ATOM 3862 HA3 GLY 247 29.917 38.025 188.539 1.00 0.00 H ATOM 3863 N SER 248 28.104 40.026 188.410 1.00 0.00 N ATOM 3864 CA SER 248 26.838 40.750 188.383 1.00 0.00 C ATOM 3865 C SER 248 25.654 39.791 188.364 1.00 0.00 C ATOM 3866 O SER 248 25.768 38.661 187.888 1.00 0.00 O ATOM 3867 CB SER 248 26.789 41.673 187.180 1.00 0.00 C ATOM 3868 OG SER 248 26.745 40.962 185.974 1.00 0.00 O ATOM 3874 N VAL 249 24.521 40.248 188.882 1.00 0.00 N ATOM 3875 CA VAL 249 23.291 39.463 188.851 1.00 0.00 C ATOM 3876 C VAL 249 22.875 39.150 187.419 1.00 0.00 C ATOM 3877 O VAL 249 22.156 38.183 187.170 1.00 0.00 O ATOM 3878 CB VAL 249 22.137 40.190 189.564 1.00 0.00 C ATOM 3879 CG1 VAL 249 20.826 39.449 189.349 1.00 0.00 C ATOM 3880 CG2 VAL 249 22.432 40.328 191.050 1.00 0.00 C ATOM 3890 N ASP 250 23.331 39.974 186.482 1.00 0.00 N ATOM 3891 CA ASP 250 22.980 39.806 185.076 1.00 0.00 C ATOM 3892 C ASP 250 23.445 38.455 184.551 1.00 0.00 C ATOM 3893 O ASP 250 22.948 37.969 183.534 1.00 0.00 O ATOM 3894 CB ASP 250 23.581 40.933 184.235 1.00 0.00 C ATOM 3895 CG ASP 250 22.907 42.286 184.420 1.00 0.00 C ATOM 3896 OD1 ASP 250 21.854 42.326 185.011 1.00 0.00 O ATOM 3897 OD2 ASP 250 23.520 43.280 184.111 1.00 0.00 O ATOM 3902 N ASP 251 24.402 37.852 185.248 1.00 0.00 N ATOM 3903 CA ASP 251 24.905 36.534 184.878 1.00 0.00 C ATOM 3904 C ASP 251 24.941 35.600 186.081 1.00 0.00 C ATOM 3905 O ASP 251 25.346 35.994 187.173 1.00 0.00 O ATOM 3906 CB ASP 251 26.302 36.648 184.260 1.00 0.00 C ATOM 3907 CG ASP 251 27.356 37.229 185.190 1.00 0.00 C ATOM 3908 OD1 ASP 251 27.689 36.585 186.156 1.00 0.00 O ATOM 3909 OD2 ASP 251 27.932 38.234 184.848 1.00 0.00 O ATOM 3914 N VAL 252 24.511 34.360 185.873 1.00 0.00 N ATOM 3915 CA VAL 252 23.379 34.078 184.996 1.00 0.00 C ATOM 3916 C VAL 252 23.830 33.909 183.552 1.00 0.00 C ATOM 3917 O VAL 252 24.910 34.361 183.170 1.00 0.00 O ATOM 3918 CB VAL 252 22.320 35.194 185.066 1.00 0.00 C ATOM 3919 CG1 VAL 252 21.389 35.120 183.864 1.00 0.00 C ATOM 3920 CG2 VAL 252 21.525 35.095 186.359 1.00 0.00 C ATOM 3930 N LEU 253 22.996 33.256 182.750 1.00 0.00 N ATOM 3931 CA LEU 253 23.451 32.633 181.512 1.00 0.00 C ATOM 3932 C LEU 253 24.403 33.548 180.753 1.00 0.00 C ATOM 3933 O LEU 253 25.233 33.085 179.969 1.00 0.00 O ATOM 3934 CB LEU 253 22.252 32.261 180.633 1.00 0.00 C ATOM 3935 CG LEU 253 21.355 33.437 180.222 1.00 0.00 C ATOM 3936 CD1 LEU 253 21.754 33.941 178.842 1.00 0.00 C ATOM 3937 CD2 LEU 253 19.899 32.995 180.233 1.00 0.00 C ATOM 3949 N ASP 254 24.280 34.850 180.989 1.00 0.00 N ATOM 3950 CA ASP 254 25.139 35.831 180.340 1.00 0.00 C ATOM 3951 C ASP 254 26.609 35.551 180.622 1.00 0.00 C ATOM 3952 O ASP 254 27.493 36.199 180.063 1.00 0.00 O ATOM 3953 CB ASP 254 24.778 37.247 180.797 1.00 0.00 C ATOM 3954 CG ASP 254 23.515 37.810 180.160 1.00 0.00 C ATOM 3955 OD1 ASP 254 23.022 37.211 179.234 1.00 0.00 O ATOM 3956 OD2 ASP 254 22.966 38.742 180.698 1.00 0.00 O ATOM 3961 N LYS 255 26.863 34.580 181.493 1.00 0.00 N ATOM 3962 CA LYS 255 28.213 34.068 181.696 1.00 0.00 C ATOM 3963 C LYS 255 28.770 33.458 180.417 1.00 0.00 C ATOM 3964 O LYS 255 28.091 33.417 179.391 1.00 0.00 O ATOM 3965 CB LYS 255 28.230 33.033 182.823 1.00 0.00 C ATOM 3966 CG LYS 255 27.994 33.611 184.212 1.00 0.00 C ATOM 3967 CD LYS 255 28.269 32.580 185.295 1.00 0.00 C ATOM 3968 CE LYS 255 28.028 33.156 186.683 1.00 0.00 C ATOM 3969 NZ LYS 255 28.935 34.299 186.976 1.00 0.00 N ATOM 3983 N LEU 256 30.009 32.983 180.483 1.00 0.00 N ATOM 3984 CA LEU 256 30.628 32.295 179.357 1.00 0.00 C ATOM 3985 C LEU 256 30.234 30.823 179.327 1.00 0.00 C ATOM 3986 O LEU 256 30.631 30.083 178.428 1.00 0.00 O ATOM 3987 CB LEU 256 32.153 32.436 179.422 1.00 0.00 C ATOM 3988 CG LEU 256 32.678 33.877 179.355 1.00 0.00 C ATOM 3989 CD1 LEU 256 34.190 33.890 179.541 1.00 0.00 C ATOM 3990 CD2 LEU 256 32.293 34.497 178.021 1.00 0.00 C ATOM 4002 N LYS 257 29.451 30.406 180.316 1.00 0.00 N ATOM 4003 CA LYS 257 28.985 29.027 180.395 1.00 0.00 C ATOM 4004 C LYS 257 28.445 28.549 179.053 1.00 0.00 C ATOM 4005 O LYS 257 27.636 29.230 178.421 1.00 0.00 O ATOM 4006 CB LYS 257 27.909 28.886 181.473 1.00 0.00 C ATOM 4007 CG LYS 257 28.424 29.040 182.898 1.00 0.00 C ATOM 4008 CD LYS 257 27.304 28.860 183.913 1.00 0.00 C ATOM 4009 CE LYS 257 27.834 28.914 185.338 1.00 0.00 C ATOM 4010 NZ LYS 257 26.736 28.892 186.342 1.00 0.00 N ATOM 4024 N HIS 258 28.899 27.378 178.621 1.00 0.00 N ATOM 4025 CA HIS 258 28.387 26.760 177.403 1.00 0.00 C ATOM 4026 C HIS 258 26.993 26.185 177.620 1.00 0.00 C ATOM 4027 O HIS 258 26.119 26.311 176.763 1.00 0.00 O ATOM 4028 CB HIS 258 29.335 25.661 176.914 1.00 0.00 C ATOM 4029 CG HIS 258 28.889 25.003 175.645 1.00 0.00 C ATOM 4030 ND1 HIS 258 28.880 25.657 174.430 1.00 0.00 N ATOM 4031 CD2 HIS 258 28.437 23.750 175.401 1.00 0.00 C ATOM 4032 CE1 HIS 258 28.440 24.833 173.495 1.00 0.00 C ATOM 4033 NE2 HIS 258 28.165 23.671 174.058 1.00 0.00 N ATOM 4041 N LEU 259 26.792 25.554 178.772 1.00 0.00 N ATOM 4042 CA LEU 259 25.510 24.939 179.094 1.00 0.00 C ATOM 4043 C LEU 259 24.603 25.911 179.836 1.00 0.00 C ATOM 4044 O LEU 259 25.076 26.794 180.552 1.00 0.00 O ATOM 4045 CB LEU 259 25.727 23.669 179.928 1.00 0.00 C ATOM 4046 CG LEU 259 26.291 22.470 179.155 1.00 0.00 C ATOM 4047 CD1 LEU 259 25.532 22.287 177.849 1.00 0.00 C ATOM 4048 CD2 LEU 259 27.774 22.686 178.892 1.00 0.00 C ATOM 4060 N SER 260 23.296 25.744 179.663 1.00 0.00 N ATOM 4061 CA SER 260 22.319 26.597 180.328 1.00 0.00 C ATOM 4062 C SER 260 20.981 25.885 180.486 1.00 0.00 C ATOM 4063 O SER 260 20.832 24.729 180.088 1.00 0.00 O ATOM 4064 CB SER 260 22.142 27.888 179.553 1.00 0.00 C ATOM 4065 OG SER 260 21.515 27.679 178.318 1.00 0.00 O ATOM 4071 N GLN 261 20.013 26.581 181.070 1.00 0.00 N ATOM 4072 CA GLN 261 18.682 26.021 181.273 1.00 0.00 C ATOM 4073 C GLN 261 17.606 27.088 181.123 1.00 0.00 C ATOM 4074 O GLN 261 17.678 28.148 181.745 1.00 0.00 O ATOM 4075 CB GLN 261 18.578 25.372 182.656 1.00 0.00 C ATOM 4076 CG GLN 261 17.210 24.794 182.972 1.00 0.00 C ATOM 4077 CD GLN 261 16.883 23.581 182.120 1.00 0.00 C ATOM 4078 OE1 GLN 261 17.636 22.603 182.093 1.00 0.00 O ATOM 4079 NE2 GLN 261 15.760 23.640 181.414 1.00 0.00 N ATOM 4088 N THR 262 16.607 26.802 180.295 1.00 0.00 N ATOM 4089 CA THR 262 15.505 27.731 180.074 1.00 0.00 C ATOM 4090 C THR 262 14.162 27.068 180.351 1.00 0.00 C ATOM 4091 O THR 262 14.104 25.922 180.798 1.00 0.00 O ATOM 4092 CB THR 262 15.508 28.281 178.635 1.00 0.00 C ATOM 4093 OG1 THR 262 15.156 27.234 177.722 1.00 0.00 O ATOM 4094 CG2 THR 262 16.883 28.823 178.275 1.00 0.00 C ATOM 4102 N LEU 263 13.082 27.794 180.081 1.00 0.00 N ATOM 4103 CA LEU 263 11.742 27.219 180.118 1.00 0.00 C ATOM 4104 C LEU 263 11.518 26.269 178.950 1.00 0.00 C ATOM 4105 O LEU 263 12.223 26.331 177.943 1.00 0.00 O ATOM 4106 CB LEU 263 10.688 28.333 180.111 1.00 0.00 C ATOM 4107 CG LEU 263 10.699 29.252 181.338 1.00 0.00 C ATOM 4108 CD1 LEU 263 9.684 30.373 181.160 1.00 0.00 C ATOM 4109 CD2 LEU 263 10.392 28.438 182.586 1.00 0.00 C ATOM 4121 N PRO 264 10.531 25.389 179.090 1.00 0.00 N ATOM 4122 CA PRO 264 10.217 24.419 178.048 1.00 0.00 C ATOM 4123 C PRO 264 9.956 25.107 176.715 1.00 0.00 C ATOM 4124 O PRO 264 10.278 24.569 175.655 1.00 0.00 O ATOM 4125 CB PRO 264 8.974 23.694 178.575 1.00 0.00 C ATOM 4126 CG PRO 264 9.069 23.823 180.057 1.00 0.00 C ATOM 4127 CD PRO 264 9.673 25.181 180.301 1.00 0.00 C ATOM 4135 N GLU 265 9.373 26.299 176.773 1.00 0.00 N ATOM 4136 CA GLU 265 9.061 27.060 175.569 1.00 0.00 C ATOM 4137 C GLU 265 10.312 27.306 174.734 1.00 0.00 C ATOM 4138 O GLU 265 11.302 27.849 175.226 1.00 0.00 O ATOM 4139 CB GLU 265 8.402 28.392 175.933 1.00 0.00 C ATOM 4140 CG GLU 265 7.946 29.215 174.737 1.00 0.00 C ATOM 4141 CD GLU 265 7.246 30.472 175.173 1.00 0.00 C ATOM 4142 OE1 GLU 265 7.062 30.647 176.354 1.00 0.00 O ATOM 4143 OE2 GLU 265 6.995 31.309 174.340 1.00 0.00 O ATOM 4150 N SER 266 10.261 26.902 173.469 1.00 0.00 N ATOM 4151 CA SER 266 11.404 27.042 172.575 1.00 0.00 C ATOM 4152 C SER 266 11.441 28.427 171.941 1.00 0.00 C ATOM 4153 O SER 266 11.297 28.569 170.727 1.00 0.00 O ATOM 4154 CB SER 266 11.363 25.971 171.503 1.00 0.00 C ATOM 4155 OG SER 266 11.442 24.681 172.044 1.00 0.00 O ATOM 4161 N GLU 267 11.636 29.447 172.770 1.00 0.00 N ATOM 4162 CA GLU 267 11.682 30.824 172.294 1.00 0.00 C ATOM 4163 C GLU 267 12.782 31.612 172.993 1.00 0.00 C ATOM 4164 O GLU 267 12.553 32.222 174.038 1.00 0.00 O ATOM 4165 CB GLU 267 10.330 31.509 172.503 1.00 0.00 C ATOM 4166 CG GLU 267 10.237 32.910 171.915 1.00 0.00 C ATOM 4167 CD GLU 267 10.581 32.912 170.452 1.00 0.00 C ATOM 4168 OE1 GLU 267 9.866 32.304 169.692 1.00 0.00 O ATOM 4169 OE2 GLU 267 11.492 33.612 170.078 1.00 0.00 O ATOM 4176 N GLN 268 13.976 31.596 172.411 1.00 0.00 N ATOM 4177 CA GLN 268 15.107 32.333 172.962 1.00 0.00 C ATOM 4178 C GLN 268 15.436 31.865 174.373 1.00 0.00 C ATOM 4179 O GLN 268 14.999 30.797 174.801 1.00 0.00 O ATOM 4180 CB GLN 268 14.813 33.836 172.971 1.00 0.00 C ATOM 4181 CG GLN 268 14.610 34.439 171.592 1.00 0.00 C ATOM 4182 CD GLN 268 14.279 35.918 171.649 1.00 0.00 C ATOM 4183 OE1 GLN 268 14.210 36.510 172.730 1.00 0.00 O ATOM 4184 NE2 GLN 268 14.068 36.522 170.486 1.00 0.00 N ATOM 4193 N PHE 269 16.209 32.670 175.094 1.00 0.00 N ATOM 4194 CA PHE 269 16.524 32.385 176.489 1.00 0.00 C ATOM 4195 C PHE 269 15.381 32.799 177.408 1.00 0.00 C ATOM 4196 O PHE 269 14.854 33.905 177.298 1.00 0.00 O ATOM 4197 CB PHE 269 17.814 33.095 176.902 1.00 0.00 C ATOM 4198 CG PHE 269 19.057 32.473 176.332 1.00 0.00 C ATOM 4199 CD1 PHE 269 19.693 33.040 175.236 1.00 0.00 C ATOM 4200 CD2 PHE 269 19.593 31.322 176.887 1.00 0.00 C ATOM 4201 CE1 PHE 269 20.836 32.468 174.710 1.00 0.00 C ATOM 4202 CE2 PHE 269 20.737 30.750 176.365 1.00 0.00 C ATOM 4203 CZ PHE 269 21.358 31.324 175.275 1.00 0.00 C ATOM 4213 N ASN 270 15.002 31.901 178.311 1.00 0.00 N ATOM 4214 CA ASN 270 13.900 32.160 179.232 1.00 0.00 C ATOM 4215 C ASN 270 14.299 31.848 180.669 1.00 0.00 C ATOM 4216 O ASN 270 15.482 31.717 180.981 1.00 0.00 O ATOM 4217 CB ASN 270 12.660 31.374 178.848 1.00 0.00 C ATOM 4218 CG ASN 270 12.107 31.739 177.498 1.00 0.00 C ATOM 4219 OD1 ASN 270 11.541 32.821 177.309 1.00 0.00 O ATOM 4220 ND2 ASN 270 12.194 30.809 176.583 1.00 0.00 N TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 644 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 59.34 66.0 162 100.0 162 ARMSMC SECONDARY STRUCTURE . . 57.48 74.1 116 100.0 116 ARMSMC SURFACE . . . . . . . . 63.35 61.2 116 100.0 116 ARMSMC BURIED . . . . . . . . 47.77 78.3 46 100.0 46 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 74.11 55.3 76 100.0 76 ARMSSC1 RELIABLE SIDE CHAINS . 76.62 52.1 71 100.0 71 ARMSSC1 SECONDARY STRUCTURE . . 67.71 63.6 55 100.0 55 ARMSSC1 SURFACE . . . . . . . . 77.14 51.9 54 100.0 54 ARMSSC1 BURIED . . . . . . . . 66.07 63.6 22 100.0 22 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 57.33 62.7 59 100.0 59 ARMSSC2 RELIABLE SIDE CHAINS . 50.79 68.9 45 100.0 45 ARMSSC2 SECONDARY STRUCTURE . . 52.68 69.0 42 100.0 42 ARMSSC2 SURFACE . . . . . . . . 55.57 65.9 41 100.0 41 ARMSSC2 BURIED . . . . . . . . 61.14 55.6 18 100.0 18 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 55.29 60.9 23 100.0 23 ARMSSC3 RELIABLE SIDE CHAINS . 46.13 58.8 17 100.0 17 ARMSSC3 SECONDARY STRUCTURE . . 54.04 63.2 19 100.0 19 ARMSSC3 SURFACE . . . . . . . . 56.53 59.1 22 100.0 22 ARMSSC3 BURIED . . . . . . . . 1.45 100.0 1 100.0 1 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 66.21 66.7 9 100.0 9 ARMSSC4 RELIABLE SIDE CHAINS . 66.21 66.7 9 100.0 9 ARMSSC4 SECONDARY STRUCTURE . . 70.17 62.5 8 100.0 8 ARMSSC4 SURFACE . . . . . . . . 66.21 66.7 9 100.0 9 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 5.34 (Number of atoms: 82) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 5.34 82 100.0 82 CRMSCA CRN = ALL/NP . . . . . 0.0651 CRMSCA SECONDARY STRUCTURE . . 4.34 58 100.0 58 CRMSCA SURFACE . . . . . . . . 5.30 59 100.0 59 CRMSCA BURIED . . . . . . . . 5.43 23 100.0 23 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 5.38 406 100.0 406 CRMSMC SECONDARY STRUCTURE . . 4.39 288 100.0 288 CRMSMC SURFACE . . . . . . . . 5.32 292 100.0 292 CRMSMC BURIED . . . . . . . . 5.52 114 100.0 114 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 7.18 316 100.0 316 CRMSSC RELIABLE SIDE CHAINS . 6.75 264 100.0 264 CRMSSC SECONDARY STRUCTURE . . 6.18 232 100.0 232 CRMSSC SURFACE . . . . . . . . 7.44 221 100.0 221 CRMSSC BURIED . . . . . . . . 6.52 95 100.0 95 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 6.23 644 100.0 644 CRMSALL SECONDARY STRUCTURE . . 5.28 464 100.0 464 CRMSALL SURFACE . . . . . . . . 6.34 457 100.0 457 CRMSALL BURIED . . . . . . . . 5.96 187 100.0 187 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.315 1.000 0.500 82 100.0 82 ERRCA SECONDARY STRUCTURE . . 3.687 1.000 0.500 58 100.0 58 ERRCA SURFACE . . . . . . . . 4.399 1.000 0.500 59 100.0 59 ERRCA BURIED . . . . . . . . 4.099 1.000 0.500 23 100.0 23 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.330 1.000 0.500 406 100.0 406 ERRMC SECONDARY STRUCTURE . . 3.702 1.000 0.500 288 100.0 288 ERRMC SURFACE . . . . . . . . 4.387 1.000 0.500 292 100.0 292 ERRMC BURIED . . . . . . . . 4.187 1.000 0.500 114 100.0 114 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 5.697 1.000 0.500 316 100.0 316 ERRSC RELIABLE SIDE CHAINS . 5.425 1.000 0.500 264 100.0 264 ERRSC SECONDARY STRUCTURE . . 5.000 1.000 0.500 232 100.0 232 ERRSC SURFACE . . . . . . . . 5.945 1.000 0.500 221 100.0 221 ERRSC BURIED . . . . . . . . 5.121 1.000 0.500 95 100.0 95 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.921 1.000 0.500 644 100.0 644 ERRALL SECONDARY STRUCTURE . . 4.287 1.000 0.500 464 100.0 464 ERRALL SURFACE . . . . . . . . 5.055 1.000 0.500 457 100.0 457 ERRALL BURIED . . . . . . . . 4.593 1.000 0.500 187 100.0 187 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 4 19 34 59 75 82 82 DISTCA CA (P) 4.88 23.17 41.46 71.95 91.46 82 DISTCA CA (RMS) 0.82 1.56 2.05 2.87 4.15 DISTCA ALL (N) 15 127 258 434 564 644 644 DISTALL ALL (P) 2.33 19.72 40.06 67.39 87.58 644 DISTALL ALL (RMS) 0.80 1.55 2.11 2.95 4.38 DISTALL END of the results output