####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 71 ( 284), selected 71 , name T0589AL285_1-D2 # Molecule2: number of CA atoms 82 ( 644), selected 71 , name T0589-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0589AL285_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 71 189 - 270 2.76 2.76 LCS_AVERAGE: 86.59 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 67 189 - 257 1.97 2.80 LCS_AVERAGE: 77.45 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 55 189 - 243 0.99 2.78 LCS_AVERAGE: 54.67 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 71 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT V 189 V 189 55 67 71 7 31 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT L 190 L 190 55 67 71 7 18 46 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT T 191 T 191 55 67 71 7 33 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT G 192 G 192 55 67 71 7 31 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT F 193 F 193 55 67 71 7 31 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT F 194 F 194 55 67 71 7 34 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT Q 195 Q 195 55 67 71 9 36 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT S 196 S 196 55 67 71 7 36 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT L 197 L 197 55 67 71 4 36 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT N 198 N 198 55 67 71 4 33 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT I 199 I 199 55 67 71 8 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT S 200 S 200 55 67 71 7 39 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT E 201 E 201 55 67 71 4 33 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT T 202 T 202 55 67 71 7 31 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT Q 203 Q 203 55 67 71 15 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT I 204 I 204 55 67 71 25 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT K 205 K 205 55 67 71 25 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT S 206 S 206 55 67 71 26 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT C 207 C 207 55 67 71 26 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT I 208 I 208 55 67 71 26 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT S 209 S 209 55 67 71 26 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT I 210 I 210 55 67 71 26 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT I 211 I 211 55 67 71 13 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT D 212 D 212 55 67 71 12 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT N 213 N 213 55 67 71 11 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT L 214 L 214 55 67 71 11 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT E 215 E 215 55 67 71 24 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT K 216 K 216 55 67 71 26 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT I 217 I 217 55 67 71 9 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT G 218 G 218 55 67 71 4 6 41 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT E 219 E 219 55 67 71 17 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT A 220 A 220 55 67 71 21 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT K 221 K 221 55 67 71 26 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT V 222 V 222 55 67 71 26 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT K 223 K 223 55 67 71 26 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT L 224 L 224 55 67 71 26 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT E 225 E 225 55 67 71 26 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT L 226 L 226 55 67 71 26 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT E 227 E 227 55 67 71 26 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT K 228 K 228 55 67 71 26 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT E 229 E 229 55 67 71 26 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT G 230 G 230 55 67 71 25 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT I 231 I 231 55 67 71 26 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT N 232 N 232 55 67 71 26 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT P 233 P 233 55 67 71 26 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT E 234 E 234 55 67 71 26 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT Q 235 Q 235 55 67 71 26 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT T 236 T 236 55 67 71 26 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT Q 237 Q 237 55 67 71 26 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT K 238 K 238 55 67 71 26 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT I 239 I 239 55 67 71 26 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT I 240 I 240 55 67 71 26 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT D 241 D 241 55 67 71 26 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT F 242 F 242 55 67 71 15 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT V 243 V 243 55 67 71 11 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT D 246 D 246 43 67 71 0 3 3 5 22 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT G 247 G 247 3 67 71 4 4 4 5 8 17 43 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT S 248 S 248 3 67 71 4 4 4 6 9 18 56 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT V 249 V 249 10 67 71 8 9 9 20 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT D 250 D 250 10 67 71 8 9 9 10 12 45 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT D 251 D 251 10 67 71 7 9 9 46 57 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT V 252 V 252 10 67 71 8 9 45 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT L 253 L 253 10 67 71 8 9 9 10 11 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT D 254 D 254 10 67 71 8 9 9 39 56 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT K 255 K 255 10 67 71 8 9 14 55 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT L 256 L 256 10 67 71 8 9 9 36 58 59 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT K 257 K 257 10 67 71 8 9 9 10 22 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT H 258 H 258 10 11 71 3 4 9 34 42 52 62 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_GDT Q 268 Q 268 3 3 71 3 3 3 3 3 3 3 3 3 3 6 8 9 10 11 46 52 69 71 71 LCS_GDT F 269 F 269 3 3 71 3 3 3 3 3 4 7 8 11 14 17 35 45 58 70 70 70 70 71 71 LCS_GDT N 270 N 270 3 3 71 4 27 44 55 58 60 63 67 69 69 69 69 69 69 70 70 70 70 71 71 LCS_AVERAGE LCS_A: 72.90 ( 54.67 77.45 86.59 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 26 40 51 56 58 60 65 67 69 69 69 69 69 69 70 70 70 70 71 71 GDT PERCENT_AT 31.71 48.78 62.20 68.29 70.73 73.17 79.27 81.71 84.15 84.15 84.15 84.15 84.15 84.15 85.37 85.37 85.37 85.37 86.59 86.59 GDT RMS_LOCAL 0.34 0.52 0.87 1.02 1.10 1.28 1.76 1.87 2.07 2.07 2.07 2.07 2.07 2.07 2.34 2.34 2.34 2.34 2.76 2.76 GDT RMS_ALL_AT 3.00 2.95 2.79 2.78 2.78 2.79 2.79 2.80 2.80 2.80 2.80 2.80 2.80 2.80 2.78 2.78 2.78 2.78 2.76 2.76 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA V 189 V 189 1.809 3 0.079 0.079 1.868 75.000 42.857 LGA L 190 L 190 2.056 4 0.119 0.119 2.056 68.810 34.405 LGA T 191 T 191 1.577 3 0.021 0.021 1.715 75.000 42.857 LGA G 192 G 192 2.068 0 0.000 0.000 2.068 70.833 70.833 LGA F 193 F 193 1.870 7 0.000 0.000 1.969 72.857 26.494 LGA F 194 F 194 1.040 7 0.014 0.014 1.342 83.690 30.433 LGA Q 195 Q 195 1.116 5 0.078 0.078 1.182 81.429 36.190 LGA S 196 S 196 1.155 2 0.023 0.023 1.167 81.429 54.286 LGA L 197 L 197 1.235 4 0.000 0.000 1.390 81.429 40.714 LGA N 198 N 198 1.434 4 0.027 0.027 1.434 81.429 40.714 LGA I 199 I 199 1.141 4 0.045 0.045 1.399 81.429 40.714 LGA S 200 S 200 1.430 2 0.055 0.055 1.430 83.690 55.794 LGA E 201 E 201 1.836 5 0.119 0.119 1.836 72.857 32.381 LGA T 202 T 202 1.803 3 0.166 0.166 1.803 75.000 42.857 LGA Q 203 Q 203 1.370 5 0.163 0.163 1.453 81.429 36.190 LGA I 204 I 204 1.342 4 0.020 0.020 1.435 81.429 40.714 LGA K 205 K 205 1.239 5 0.016 0.016 1.266 83.690 37.196 LGA S 206 S 206 0.756 2 0.043 0.043 1.022 88.214 58.810 LGA C 207 C 207 0.767 2 0.013 0.013 0.834 90.476 60.317 LGA I 208 I 208 0.883 4 0.054 0.054 0.883 90.476 45.238 LGA S 209 S 209 0.670 2 0.004 0.004 0.807 92.857 61.905 LGA I 210 I 210 0.455 4 0.000 0.000 0.540 97.619 48.810 LGA I 211 I 211 0.552 4 0.018 0.018 0.699 92.857 46.429 LGA D 212 D 212 0.706 4 0.028 0.028 1.050 88.214 44.107 LGA N 213 N 213 0.759 4 0.054 0.054 0.844 90.476 45.238 LGA L 214 L 214 0.996 4 0.000 0.000 1.199 88.214 44.107 LGA E 215 E 215 0.859 5 0.086 0.086 1.305 88.214 39.206 LGA K 216 K 216 0.491 5 0.078 0.078 0.800 92.857 41.270 LGA I 217 I 217 1.130 4 0.702 0.702 2.798 77.619 38.810 LGA G 218 G 218 1.922 0 0.057 0.057 2.047 75.119 75.119 LGA E 219 E 219 0.655 5 0.033 0.033 0.997 92.857 41.270 LGA A 220 A 220 0.602 1 0.103 0.103 0.602 97.619 78.095 LGA K 221 K 221 0.208 5 0.029 0.029 0.335 100.000 44.444 LGA V 222 V 222 0.613 3 0.000 0.000 0.828 92.857 53.061 LGA K 223 K 223 0.824 5 0.021 0.021 0.824 90.476 40.212 LGA L 224 L 224 0.407 4 0.023 0.023 0.493 100.000 50.000 LGA E 225 E 225 0.171 5 0.041 0.041 0.266 100.000 44.444 LGA L 226 L 226 0.485 4 0.045 0.045 0.581 97.619 48.810 LGA E 227 E 227 0.497 5 0.026 0.026 0.497 100.000 44.444 LGA K 228 K 228 0.249 5 0.031 0.031 0.320 100.000 44.444 LGA E 229 E 229 0.196 5 0.100 0.100 0.441 100.000 44.444 LGA G 230 G 230 0.238 0 0.060 0.060 0.348 100.000 100.000 LGA I 231 I 231 0.477 4 0.041 0.041 0.676 95.238 47.619 LGA N 232 N 232 1.072 4 0.081 0.081 1.135 83.690 41.845 LGA P 233 P 233 1.018 3 0.026 0.026 1.068 81.429 46.531 LGA E 234 E 234 1.150 5 0.097 0.097 1.233 81.429 36.190 LGA Q 235 Q 235 1.058 5 0.020 0.020 1.105 81.429 36.190 LGA T 236 T 236 1.152 3 0.025 0.025 1.159 81.429 46.531 LGA Q 237 Q 237 1.162 5 0.029 0.029 1.237 81.429 36.190 LGA K 238 K 238 1.262 5 0.000 0.000 1.262 81.429 36.190 LGA I 239 I 239 1.224 4 0.000 0.000 1.265 81.429 40.714 LGA I 240 I 240 0.574 4 0.055 0.055 0.900 90.476 45.238 LGA D 241 D 241 0.961 4 0.073 0.073 1.156 85.952 42.976 LGA F 242 F 242 1.362 7 0.102 0.102 1.362 81.429 29.610 LGA V 243 V 243 1.323 3 0.031 0.031 1.439 81.429 46.531 LGA D 246 D 246 4.491 4 0.557 0.557 4.609 37.262 18.631 LGA G 247 G 247 5.606 0 0.250 0.250 5.606 25.000 25.000 LGA S 248 S 248 5.624 2 0.688 0.688 5.624 30.476 20.317 LGA V 249 V 249 3.520 3 0.608 0.608 4.665 40.357 23.061 LGA D 250 D 250 4.901 4 0.007 0.007 4.901 37.262 18.631 LGA D 251 D 251 2.953 4 0.009 0.009 3.036 61.190 30.595 LGA V 252 V 252 2.152 3 0.099 0.099 2.589 67.024 38.299 LGA L 253 L 253 4.079 4 0.048 0.048 4.079 43.452 21.726 LGA D 254 D 254 3.418 4 0.069 0.069 3.418 55.476 27.738 LGA K 255 K 255 2.133 5 0.027 0.027 2.151 68.810 30.582 LGA L 256 L 256 3.263 4 0.047 0.047 3.263 53.690 26.845 LGA K 257 K 257 4.484 5 0.176 0.176 4.489 41.905 18.624 LGA H 258 H 258 4.908 6 0.635 0.635 7.650 24.762 9.905 LGA Q 268 Q 268 12.993 5 0.105 0.105 12.993 0.000 0.000 LGA F 269 F 269 9.401 7 0.313 0.313 10.405 8.929 3.247 LGA N 270 N 270 2.806 4 0.620 0.620 5.120 49.405 24.702 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 71 284 284 100.00 562 284 50.53 82 SUMMARY(RMSD_GDC): 2.758 2.594 2.594 65.723 34.865 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 71 82 4.0 67 1.87 71.037 75.053 3.397 LGA_LOCAL RMSD: 1.872 Number of atoms: 67 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.796 Number of assigned atoms: 71 Std_ASGN_ATOMS RMSD: 2.758 Standard rmsd on all 71 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.787868 * X + -0.570290 * Y + 0.232449 * Z + 26.996220 Y_new = 0.615751 * X + 0.736046 * Y + -0.281225 * Z + 16.473967 Z_new = -0.010713 * X + 0.364699 * Y + 0.931064 * Z + 226.286758 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.663383 0.010713 0.373332 [DEG: 38.0091 0.6138 21.3904 ] ZXZ: 0.690727 0.373479 -0.029367 [DEG: 39.5757 21.3988 -1.6826 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0589AL285_1-D2 REMARK 2: T0589-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0589AL285_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 71 82 4.0 67 1.87 75.053 2.76 REMARK ---------------------------------------------------------- MOLECULE T0589AL285_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK Aligment from pdb entry: 3lc0A ATOM 649 N VAL 189 23.465 26.591 190.410 1.00 0.00 N ATOM 650 CA VAL 189 24.204 27.279 189.342 1.00 0.00 C ATOM 651 C VAL 189 25.268 26.346 188.761 1.00 0.00 C ATOM 652 O VAL 189 25.209 25.988 187.585 1.00 0.00 O ATOM 653 N LEU 190 26.220 25.929 189.596 1.00 0.00 N ATOM 654 CA LEU 190 27.260 24.988 189.182 1.00 0.00 C ATOM 655 C LEU 190 26.687 23.672 188.639 1.00 0.00 C ATOM 656 O LEU 190 27.243 23.096 187.698 1.00 0.00 O ATOM 657 N THR 191 25.586 23.200 189.224 1.00 0.00 N ATOM 658 CA THR 191 24.906 21.996 188.723 1.00 0.00 C ATOM 659 C THR 191 24.547 22.107 187.237 1.00 0.00 C ATOM 660 O THR 191 24.786 21.174 186.457 1.00 0.00 O ATOM 661 N GLY 192 23.973 23.245 186.852 1.00 0.00 N ATOM 662 CA GLY 192 23.589 23.468 185.456 1.00 0.00 C ATOM 663 C GLY 192 24.803 23.570 184.526 1.00 0.00 C ATOM 664 O GLY 192 24.830 22.954 183.462 1.00 0.00 O ATOM 665 N PHE 193 25.803 24.342 184.944 1.00 0.00 N ATOM 666 CA PHE 193 27.041 24.513 184.182 1.00 0.00 C ATOM 667 C PHE 193 27.698 23.153 183.915 1.00 0.00 C ATOM 668 O PHE 193 28.144 22.876 182.794 1.00 0.00 O ATOM 669 N PHE 194 27.728 22.307 184.944 1.00 0.00 N ATOM 670 CA PHE 194 28.260 20.946 184.847 1.00 0.00 C ATOM 671 C PHE 194 27.386 20.056 183.944 1.00 0.00 C ATOM 672 O PHE 194 27.907 19.282 183.131 1.00 0.00 O ATOM 673 N GLN 195 26.067 20.197 184.070 1.00 0.00 N ATOM 674 CA GLN 195 25.113 19.423 183.277 1.00 0.00 C ATOM 675 C GLN 195 25.189 19.769 181.789 1.00 0.00 C ATOM 676 O GLN 195 25.273 18.874 180.938 1.00 0.00 O ATOM 677 N SER 196 25.171 21.068 181.490 1.00 0.00 N ATOM 678 CA SER 196 25.227 21.569 180.113 1.00 0.00 C ATOM 679 C SER 196 26.565 21.281 179.424 1.00 0.00 C ATOM 680 O SER 196 26.645 21.244 178.191 1.00 0.00 O ATOM 681 N LEU 197 27.607 21.074 180.227 1.00 0.00 N ATOM 682 CA LEU 197 28.945 20.769 179.721 1.00 0.00 C ATOM 683 C LEU 197 29.102 19.296 179.337 1.00 0.00 C ATOM 684 O LEU 197 30.122 18.903 178.764 1.00 0.00 O ATOM 685 N ASN 198 28.089 18.491 179.655 1.00 0.00 N ATOM 686 CA ASN 198 28.060 17.081 179.275 1.00 0.00 C ATOM 687 C ASN 198 28.682 16.130 180.282 1.00 0.00 C ATOM 688 O ASN 198 28.992 14.989 179.945 1.00 0.00 O ATOM 689 N ILE 199 28.858 16.591 181.520 1.00 0.00 N ATOM 690 CA ILE 199 29.447 15.757 182.572 1.00 0.00 C ATOM 691 C ILE 199 28.365 14.977 183.319 1.00 0.00 C ATOM 692 O ILE 199 27.284 15.507 183.591 1.00 0.00 O ATOM 693 N SER 200 28.670 13.718 183.633 1.00 0.00 N ATOM 694 CA SER 200 27.793 12.853 184.421 1.00 0.00 C ATOM 695 C SER 200 27.551 13.454 185.799 1.00 0.00 C ATOM 696 O SER 200 28.473 13.993 186.406 1.00 0.00 O ATOM 697 N GLU 201 26.321 13.340 186.297 1.00 0.00 N ATOM 698 CA GLU 201 25.949 13.954 187.573 1.00 0.00 C ATOM 699 C GLU 201 26.655 13.344 188.785 1.00 0.00 C ATOM 700 O GLU 201 26.752 13.983 189.827 1.00 0.00 O ATOM 701 N THR 202 27.158 12.118 188.645 1.00 0.00 N ATOM 702 CA THR 202 27.905 11.479 189.737 1.00 0.00 C ATOM 703 C THR 202 29.274 12.125 190.036 1.00 0.00 C ATOM 704 O THR 202 29.866 11.852 191.086 1.00 0.00 O ATOM 705 N GLN 203 29.760 12.981 189.133 1.00 0.00 N ATOM 706 CA GLN 203 30.968 13.784 189.387 1.00 0.00 C ATOM 707 C GLN 203 30.672 15.172 189.988 1.00 0.00 C ATOM 708 O GLN 203 31.595 15.893 190.377 1.00 0.00 O ATOM 709 N ILE 204 29.395 15.535 190.081 1.00 0.00 N ATOM 710 CA ILE 204 29.028 16.857 190.577 1.00 0.00 C ATOM 711 C ILE 204 29.473 17.080 192.024 1.00 0.00 C ATOM 712 O ILE 204 30.093 18.106 192.334 1.00 0.00 O ATOM 713 N LYS 205 29.162 16.124 192.897 1.00 0.00 N ATOM 714 CA LYS 205 29.531 16.236 194.309 1.00 0.00 C ATOM 715 C LYS 205 31.058 16.322 194.490 1.00 0.00 C ATOM 716 O LYS 205 31.546 17.234 195.167 1.00 0.00 O ATOM 717 N SER 206 31.820 15.392 193.869 1.00 0.00 N ATOM 718 CA SER 206 33.282 15.474 193.956 1.00 0.00 C ATOM 719 C SER 206 33.838 16.789 193.413 1.00 0.00 C ATOM 720 O SER 206 34.827 17.299 193.947 1.00 0.00 O ATOM 721 N CYS 207 33.211 17.319 192.362 1.00 0.00 N ATOM 722 CA CYS 207 33.575 18.631 191.818 1.00 0.00 C ATOM 723 C CYS 207 33.327 19.727 192.851 1.00 0.00 C ATOM 724 O CYS 207 34.213 20.561 193.100 1.00 0.00 O ATOM 725 N ILE 208 32.141 19.709 193.465 1.00 0.00 N ATOM 726 CA ILE 208 31.822 20.656 194.540 1.00 0.00 C ATOM 727 C ILE 208 32.883 20.582 195.630 1.00 0.00 C ATOM 728 O ILE 208 33.428 21.607 196.049 1.00 0.00 O ATOM 729 N SER 209 33.201 19.357 196.052 1.00 0.00 N ATOM 730 CA SER 209 34.227 19.113 197.064 1.00 0.00 C ATOM 731 C SER 209 35.600 19.713 196.715 1.00 0.00 C ATOM 732 O SER 209 36.285 20.266 197.581 1.00 0.00 O ATOM 733 N ILE 210 36.001 19.596 195.452 1.00 0.00 N ATOM 734 CA ILE 210 37.287 20.111 194.997 1.00 0.00 C ATOM 735 C ILE 210 37.259 21.638 194.913 1.00 0.00 C ATOM 736 O ILE 210 38.191 22.318 195.347 1.00 0.00 O ATOM 737 N ILE 211 36.160 22.151 194.376 1.00 0.00 N ATOM 738 CA ILE 211 36.000 23.568 194.084 1.00 0.00 C ATOM 739 C ILE 211 35.830 24.370 195.378 1.00 0.00 C ATOM 740 O ILE 211 36.137 25.566 195.426 1.00 0.00 O ATOM 741 N ASP 212 35.401 23.673 196.430 1.00 0.00 N ATOM 742 CA ASP 212 35.392 24.192 197.796 1.00 0.00 C ATOM 743 C ASP 212 36.807 24.594 198.230 1.00 0.00 C ATOM 744 O ASP 212 36.964 25.421 199.114 1.00 0.00 O ATOM 745 N ASN 213 37.830 24.021 197.603 1.00 0.00 N ATOM 746 CA ASN 213 39.208 24.268 198.046 1.00 0.00 C ATOM 747 C ASN 213 39.842 25.558 197.486 1.00 0.00 C ATOM 748 O ASN 213 40.979 25.885 197.839 1.00 0.00 O ATOM 749 N LEU 214 39.104 26.290 196.645 1.00 0.00 N ATOM 750 CA LEU 214 39.637 27.449 195.910 1.00 0.00 C ATOM 751 C LEU 214 40.413 28.475 196.738 1.00 0.00 C ATOM 752 O LEU 214 41.505 28.885 196.350 1.00 0.00 O ATOM 753 N GLU 215 39.850 28.898 197.866 1.00 0.00 N ATOM 754 CA GLU 215 40.502 29.896 198.712 1.00 0.00 C ATOM 755 C GLU 215 41.690 29.312 199.472 1.00 0.00 C ATOM 756 O GLU 215 42.554 30.045 199.951 1.00 0.00 O ATOM 757 N LYS 216 41.729 27.989 199.567 1.00 0.00 N ATOM 758 CA LYS 216 42.708 27.298 200.384 1.00 0.00 C ATOM 759 C LYS 216 43.960 26.901 199.593 1.00 0.00 C ATOM 760 O LYS 216 45.064 26.889 200.148 1.00 0.00 O ATOM 761 N ILE 217 43.787 26.579 198.310 1.00 0.00 N ATOM 762 CA ILE 217 44.892 26.102 197.454 1.00 0.00 C ATOM 763 C ILE 217 44.968 26.876 196.122 1.00 0.00 C ATOM 764 O ILE 217 43.979 27.501 195.724 1.00 0.00 O ATOM 765 N GLY 218 46.142 26.849 195.434 1.00 0.00 N ATOM 766 CA GLY 218 46.281 27.578 194.161 1.00 0.00 C ATOM 767 C GLY 218 45.294 27.098 193.093 1.00 0.00 C ATOM 768 O GLY 218 44.945 25.913 193.065 1.00 0.00 O ATOM 769 N GLU 219 44.852 28.019 192.232 1.00 0.00 N ATOM 770 CA GLU 219 43.831 27.736 191.214 1.00 0.00 C ATOM 771 C GLU 219 44.237 26.609 190.260 1.00 0.00 C ATOM 772 O GLU 219 43.396 25.801 189.865 1.00 0.00 O ATOM 773 N ALA 220 45.521 26.554 189.906 1.00 0.00 N ATOM 774 CA ALA 220 46.044 25.498 189.035 1.00 0.00 C ATOM 775 C ALA 220 45.924 24.116 189.672 1.00 0.00 C ATOM 776 O ALA 220 45.794 23.109 188.967 1.00 0.00 O ATOM 777 N LYS 221 45.963 24.077 191.003 1.00 0.00 N ATOM 778 CA LYS 221 45.845 22.826 191.746 1.00 0.00 C ATOM 779 C LYS 221 44.390 22.351 191.794 1.00 0.00 C ATOM 780 O LYS 221 44.122 21.152 191.697 1.00 0.00 O ATOM 781 N VAL 222 43.457 23.296 191.944 1.00 0.00 N ATOM 782 CA VAL 222 42.025 23.001 191.814 1.00 0.00 C ATOM 783 C VAL 222 41.739 22.437 190.421 1.00 0.00 C ATOM 784 O VAL 222 41.019 21.446 190.285 1.00 0.00 O ATOM 785 N LYS 223 42.323 23.062 189.400 1.00 0.00 N ATOM 786 CA LYS 223 42.168 22.618 188.020 1.00 0.00 C ATOM 787 C LYS 223 42.810 21.244 187.796 1.00 0.00 C ATOM 788 O LYS 223 42.226 20.388 187.128 1.00 0.00 O ATOM 789 N LEU 224 44.002 21.050 188.365 1.00 0.00 N ATOM 790 CA LEU 224 44.692 19.764 188.352 1.00 0.00 C ATOM 791 C LEU 224 43.829 18.632 188.925 1.00 0.00 C ATOM 792 O LEU 224 43.749 17.548 188.341 1.00 0.00 O ATOM 793 N GLU 225 43.187 18.897 190.063 1.00 0.00 N ATOM 794 CA GLU 225 42.341 17.908 190.722 1.00 0.00 C ATOM 795 C GLU 225 41.088 17.611 189.911 1.00 0.00 C ATOM 796 O GLU 225 40.629 16.476 189.882 1.00 0.00 O ATOM 797 N LEU 226 40.542 18.635 189.257 1.00 0.00 N ATOM 798 CA LEU 226 39.374 18.471 188.387 1.00 0.00 C ATOM 799 C LEU 226 39.729 17.671 187.132 1.00 0.00 C ATOM 800 O LEU 226 38.890 16.945 186.601 1.00 0.00 O ATOM 801 N GLU 227 40.969 17.813 186.668 1.00 0.00 N ATOM 802 CA GLU 227 41.477 17.065 185.512 1.00 0.00 C ATOM 803 C GLU 227 41.640 15.585 185.860 1.00 0.00 C ATOM 804 O GLU 227 41.360 14.713 185.041 1.00 0.00 O ATOM 805 N LYS 228 42.069 15.324 187.095 1.00 0.00 N ATOM 806 CA LYS 228 42.262 13.967 187.612 1.00 0.00 C ATOM 807 C LYS 228 40.908 13.248 187.727 1.00 0.00 C ATOM 808 O LYS 228 40.825 12.019 187.668 1.00 0.00 O ATOM 809 N GLU 229 39.851 14.043 187.883 1.00 0.00 N ATOM 810 CA GLU 229 38.484 13.551 187.846 1.00 0.00 C ATOM 811 C GLU 229 38.030 13.195 186.422 1.00 0.00 C ATOM 812 O GLU 229 36.985 12.572 186.240 1.00 0.00 O ATOM 813 N GLY 230 38.821 13.584 185.421 1.00 0.00 N ATOM 814 CA GLY 230 38.527 13.286 184.020 1.00 0.00 C ATOM 815 C GLY 230 37.825 14.404 183.269 1.00 0.00 C ATOM 816 O GLY 230 37.351 14.198 182.153 1.00 0.00 O ATOM 817 N ILE 231 37.765 15.587 183.872 1.00 0.00 N ATOM 818 CA ILE 231 37.074 16.733 183.278 1.00 0.00 C ATOM 819 C ILE 231 37.934 17.423 182.220 1.00 0.00 C ATOM 820 O ILE 231 39.128 17.648 182.435 1.00 0.00 O ATOM 821 N ASN 232 37.314 17.758 181.088 1.00 0.00 N ATOM 822 CA ASN 232 37.993 18.442 179.974 1.00 0.00 C ATOM 823 C ASN 232 38.291 19.914 180.305 1.00 0.00 C ATOM 824 O ASN 232 37.544 20.534 181.060 1.00 0.00 O ATOM 825 N PRO 233 39.379 20.481 179.733 1.00 0.00 N ATOM 826 CA PRO 233 39.816 21.856 180.032 1.00 0.00 C ATOM 827 C PRO 233 38.776 22.961 179.809 1.00 0.00 C ATOM 828 O PRO 233 38.799 23.975 180.531 1.00 0.00 O ATOM 829 N GLU 234 37.879 22.774 178.831 1.00 0.00 N ATOM 830 CA GLU 234 36.849 23.783 178.552 1.00 0.00 C ATOM 831 C GLU 234 35.737 23.752 179.601 1.00 0.00 C ATOM 832 O GLU 234 35.140 24.783 179.907 1.00 0.00 O ATOM 833 N GLN 235 35.474 22.565 180.146 1.00 0.00 N ATOM 834 CA GLN 235 34.501 22.373 181.227 1.00 0.00 C ATOM 835 C GLN 235 35.047 22.941 182.538 1.00 0.00 C ATOM 836 O GLN 235 34.321 23.592 183.293 1.00 0.00 O ATOM 837 N THR 236 36.331 22.689 182.791 1.00 0.00 N ATOM 838 CA THR 236 37.047 23.215 183.956 1.00 0.00 C ATOM 839 C THR 236 36.993 24.748 183.974 1.00 0.00 C ATOM 840 O THR 236 36.773 25.369 185.019 1.00 0.00 O ATOM 841 N GLN 237 37.171 25.344 182.800 1.00 0.00 N ATOM 842 CA GLN 237 37.162 26.790 182.645 1.00 0.00 C ATOM 843 C GLN 237 35.776 27.363 182.924 1.00 0.00 C ATOM 844 O GLN 237 35.648 28.397 183.584 1.00 0.00 O ATOM 845 N LYS 238 34.747 26.674 182.432 1.00 0.00 N ATOM 846 CA LYS 238 33.359 27.036 182.710 1.00 0.00 C ATOM 847 C LYS 238 33.088 27.063 184.214 1.00 0.00 C ATOM 848 O LYS 238 32.494 28.010 184.727 1.00 0.00 O ATOM 849 N ILE 239 33.540 26.021 184.912 1.00 0.00 N ATOM 850 CA ILE 239 33.446 25.935 186.367 1.00 0.00 C ATOM 851 C ILE 239 34.162 27.097 187.077 1.00 0.00 C ATOM 852 O ILE 239 33.542 27.821 187.866 1.00 0.00 O ATOM 853 N ILE 240 35.458 27.235 186.803 1.00 0.00 N ATOM 854 CA ILE 240 36.305 28.355 187.232 1.00 0.00 C ATOM 855 C ILE 240 35.610 29.716 187.108 1.00 0.00 C ATOM 856 O ILE 240 35.521 30.471 188.089 1.00 0.00 O ATOM 857 N ASP 241 35.124 30.006 185.898 1.00 0.00 N ATOM 858 CA ASP 241 34.493 31.277 185.559 1.00 0.00 C ATOM 859 C ASP 241 33.261 31.581 186.416 1.00 0.00 C ATOM 860 O ASP 241 33.153 32.674 186.972 1.00 0.00 O ATOM 861 N PHE 242 32.347 30.617 186.526 1.00 0.00 N ATOM 862 CA PHE 242 31.112 30.818 187.291 1.00 0.00 C ATOM 863 C PHE 242 31.362 31.105 188.770 1.00 0.00 C ATOM 864 O PHE 242 30.587 31.822 189.395 1.00 0.00 O ATOM 865 N VAL 243 32.434 30.544 189.328 1.00 0.00 N ATOM 866 CA VAL 243 32.782 30.787 190.731 1.00 0.00 C ATOM 867 C VAL 243 33.208 32.232 191.004 1.00 0.00 C ATOM 868 O VAL 243 33.169 32.678 192.147 1.00 0.00 O ATOM 869 N ASP 246 33.626 32.952 189.962 1.00 0.00 N ATOM 870 CA ASP 246 34.173 34.296 190.142 1.00 0.00 C ATOM 871 C ASP 246 33.225 35.421 189.711 1.00 0.00 C ATOM 872 O ASP 246 33.603 36.600 189.720 1.00 0.00 O ATOM 873 N GLY 247 31.998 35.062 189.340 1.00 0.00 N ATOM 874 CA GLY 247 30.992 36.065 189.001 1.00 0.00 C ATOM 875 C GLY 247 30.502 36.742 190.280 1.00 0.00 C ATOM 876 O GLY 247 30.083 36.058 191.213 1.00 0.00 O ATOM 877 N SER 248 30.571 38.077 190.322 1.00 0.00 N ATOM 878 CA SER 248 30.407 38.831 191.580 1.00 0.00 C ATOM 879 C SER 248 28.970 39.228 191.928 1.00 0.00 C ATOM 880 O SER 248 28.713 39.678 193.048 1.00 0.00 O ATOM 881 N VAL 249 28.042 39.054 190.991 1.00 0.00 N ATOM 882 CA VAL 249 26.644 39.455 191.192 1.00 0.00 C ATOM 883 C VAL 249 25.689 38.355 190.768 1.00 0.00 C ATOM 884 O VAL 249 26.036 37.529 189.931 1.00 0.00 O ATOM 885 N ASP 250 24.483 38.365 191.337 1.00 0.00 N ATOM 886 CA ASP 250 23.378 37.507 190.888 1.00 0.00 C ATOM 887 C ASP 250 22.947 37.864 189.459 1.00 0.00 C ATOM 888 O ASP 250 22.596 36.978 188.671 1.00 0.00 O ATOM 889 N ASP 251 22.964 39.156 189.131 1.00 0.00 N ATOM 890 CA ASP 251 22.670 39.597 187.769 1.00 0.00 C ATOM 891 C ASP 251 23.631 38.933 186.786 1.00 0.00 C ATOM 892 O ASP 251 23.246 38.595 185.667 1.00 0.00 O ATOM 893 N VAL 252 24.876 38.727 187.217 1.00 0.00 N ATOM 894 CA VAL 252 25.869 38.074 186.359 1.00 0.00 C ATOM 895 C VAL 252 25.594 36.569 186.226 1.00 0.00 C ATOM 896 O VAL 252 25.810 36.008 185.155 1.00 0.00 O ATOM 897 N LEU 253 25.098 35.924 187.285 1.00 0.00 N ATOM 898 CA LEU 253 24.712 34.503 187.169 1.00 0.00 C ATOM 899 C LEU 253 23.447 34.361 186.297 1.00 0.00 C ATOM 900 O LEU 253 23.258 33.347 185.626 1.00 0.00 O ATOM 901 N ASP 254 22.616 35.401 186.282 1.00 0.00 N ATOM 902 CA ASP 254 21.409 35.428 185.454 1.00 0.00 C ATOM 903 C ASP 254 21.759 35.432 183.965 1.00 0.00 C ATOM 904 O ASP 254 21.038 34.868 183.141 1.00 0.00 O ATOM 905 N LYS 255 22.876 36.074 183.640 1.00 0.00 N ATOM 906 CA LYS 255 23.386 36.128 182.277 1.00 0.00 C ATOM 907 C LYS 255 23.834 34.751 181.789 1.00 0.00 C ATOM 908 O LYS 255 23.519 34.356 180.668 1.00 0.00 O ATOM 909 N LEU 256 24.559 34.029 182.641 1.00 0.00 N ATOM 910 CA LEU 256 25.095 32.706 182.315 1.00 0.00 C ATOM 911 C LEU 256 24.032 31.608 182.202 1.00 0.00 C ATOM 912 O LEU 256 23.974 30.911 181.186 1.00 0.00 O ATOM 913 N LYS 257 23.203 31.451 183.235 1.00 0.00 N ATOM 914 CA LYS 257 22.300 30.290 183.313 1.00 0.00 C ATOM 915 C LYS 257 20.818 30.577 183.022 1.00 0.00 C ATOM 916 O LYS 257 20.001 29.655 182.973 1.00 0.00 O ATOM 917 N HIS 258 20.488 31.849 182.807 1.00 0.00 N ATOM 918 CA HIS 258 19.114 32.258 182.514 1.00 0.00 C ATOM 919 C HIS 258 18.511 33.018 183.678 1.00 0.00 C ATOM 920 O HIS 258 18.740 32.667 184.838 1.00 0.00 O ATOM 921 N GLN 268 17.732 34.056 183.372 1.00 0.00 N ATOM 922 CA GLN 268 17.174 34.923 184.416 1.00 0.00 C ATOM 923 C GLN 268 16.075 34.259 185.256 1.00 0.00 C ATOM 924 O GLN 268 15.864 34.638 186.408 1.00 0.00 O ATOM 925 N PHE 269 15.382 33.277 184.684 1.00 0.00 N ATOM 926 CA PHE 269 14.345 32.561 185.421 1.00 0.00 C ATOM 927 C PHE 269 14.810 31.178 185.898 1.00 0.00 C ATOM 928 O PHE 269 14.001 30.380 186.383 1.00 0.00 O ATOM 929 N ASN 270 16.107 30.902 185.758 1.00 0.00 N ATOM 930 CA ASN 270 16.729 29.711 186.343 1.00 0.00 C ATOM 931 C ASN 270 16.357 29.663 187.824 1.00 0.00 C ATOM 932 O ASN 270 16.322 30.702 188.491 1.00 0.00 O END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 284 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 37.95 87.5 136 84.0 162 ARMSMC SECONDARY STRUCTURE . . 34.72 89.6 106 91.4 116 ARMSMC SURFACE . . . . . . . . 44.09 84.4 96 82.8 116 ARMSMC BURIED . . . . . . . . 15.22 95.0 40 87.0 46 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 76 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 71 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 55 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 54 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 22 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 59 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 45 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 42 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 41 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 18 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 23 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 17 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 19 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 22 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 1 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 9 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 9 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 8 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 9 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 2.76 (Number of atoms: 71) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 2.76 71 86.6 82 CRMSCA CRN = ALL/NP . . . . . 0.0388 CRMSCA SECONDARY STRUCTURE . . 1.99 54 93.1 58 CRMSCA SURFACE . . . . . . . . 2.91 51 86.4 59 CRMSCA BURIED . . . . . . . . 2.34 20 87.0 23 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 2.60 284 70.0 406 CRMSMC SECONDARY STRUCTURE . . 1.94 216 75.0 288 CRMSMC SURFACE . . . . . . . . 2.76 204 69.9 292 CRMSMC BURIED . . . . . . . . 2.12 80 70.2 114 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 0.00 0 0.0 316 CRMSSC RELIABLE SIDE CHAINS . 0.00 0 0.0 264 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 232 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 221 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 95 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 2.60 284 44.1 644 CRMSALL SECONDARY STRUCTURE . . 1.94 216 46.6 464 CRMSALL SURFACE . . . . . . . . 2.76 204 44.6 457 CRMSALL BURIED . . . . . . . . 2.12 80 42.8 187 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.860 1.000 0.500 71 86.6 82 ERRCA SECONDARY STRUCTURE . . 1.542 1.000 0.500 54 93.1 58 ERRCA SURFACE . . . . . . . . 2.010 1.000 0.500 51 86.4 59 ERRCA BURIED . . . . . . . . 1.478 1.000 0.500 20 87.0 23 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.783 1.000 0.500 284 70.0 406 ERRMC SECONDARY STRUCTURE . . 1.498 1.000 0.500 216 75.0 288 ERRMC SURFACE . . . . . . . . 1.927 1.000 0.500 204 69.9 292 ERRMC BURIED . . . . . . . . 1.417 1.000 0.500 80 70.2 114 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.000 0.000 0.000 0 0.0 316 ERRSC RELIABLE SIDE CHAINS . 0.000 0.000 0.000 0 0.0 264 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 232 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 221 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 95 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.783 1.000 0.500 284 44.1 644 ERRALL SECONDARY STRUCTURE . . 1.498 1.000 0.500 216 46.6 464 ERRALL SURFACE . . . . . . . . 1.927 1.000 0.500 204 44.6 457 ERRALL BURIED . . . . . . . . 1.417 1.000 0.500 80 42.8 187 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 28 55 58 65 70 71 82 DISTCA CA (P) 34.15 67.07 70.73 79.27 85.37 82 DISTCA CA (RMS) 0.71 1.06 1.16 1.71 2.36 DISTCA ALL (N) 120 219 233 265 280 284 644 DISTALL ALL (P) 18.63 34.01 36.18 41.15 43.48 644 DISTALL ALL (RMS) 0.73 1.03 1.15 1.74 2.25 DISTALL END of the results output