####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 39 ( 313), selected 39 , name T0586TS481_1-D2 # Molecule2: number of CA atoms 39 ( 313), selected 39 , name T0586-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0586TS481_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 39 85 - 123 3.40 3.40 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 32 85 - 116 1.86 3.81 LONGEST_CONTINUOUS_SEGMENT: 32 86 - 117 1.98 3.65 LONGEST_CONTINUOUS_SEGMENT: 32 87 - 118 1.99 3.52 LCS_AVERAGE: 80.60 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 92 - 112 0.98 3.69 LCS_AVERAGE: 51.08 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 39 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT D 85 D 85 17 32 39 11 13 17 20 28 30 31 31 32 34 34 35 36 38 39 39 39 39 39 39 LCS_GDT Q 86 Q 86 17 32 39 11 13 17 20 28 30 31 31 32 34 34 35 36 38 39 39 39 39 39 39 LCS_GDT L 87 L 87 17 32 39 11 13 17 24 28 30 31 31 32 34 34 35 37 38 39 39 39 39 39 39 LCS_GDT K 88 K 88 18 32 39 11 13 19 25 28 30 31 31 32 34 34 36 37 38 39 39 39 39 39 39 LCS_GDT K 89 K 89 18 32 39 11 13 19 25 28 30 31 31 32 34 34 36 37 38 39 39 39 39 39 39 LCS_GDT E 90 E 90 20 32 39 11 13 19 25 28 30 31 31 32 34 34 36 37 38 39 39 39 39 39 39 LCS_GDT L 91 L 91 20 32 39 11 15 20 25 28 30 31 31 32 34 34 36 37 38 39 39 39 39 39 39 LCS_GDT A 92 A 92 21 32 39 11 15 20 25 28 30 31 31 32 34 34 36 37 38 39 39 39 39 39 39 LCS_GDT D 93 D 93 21 32 39 11 17 20 25 28 30 31 31 32 34 34 36 37 38 39 39 39 39 39 39 LCS_GDT A 94 A 94 21 32 39 11 17 20 25 28 30 31 31 32 34 34 36 37 38 39 39 39 39 39 39 LCS_GDT I 95 I 95 21 32 39 12 17 20 25 28 30 31 31 32 34 34 36 37 38 39 39 39 39 39 39 LCS_GDT T 96 T 96 21 32 39 9 17 20 25 28 30 31 31 32 34 34 36 37 38 39 39 39 39 39 39 LCS_GDT E 97 E 97 21 32 39 12 17 20 25 28 30 31 31 32 34 34 36 37 38 39 39 39 39 39 39 LCS_GDT R 98 R 98 21 32 39 12 17 20 25 28 30 31 31 32 34 34 36 37 38 39 39 39 39 39 39 LCS_GDT F 99 F 99 21 32 39 12 17 20 25 28 30 31 31 32 34 34 36 37 38 39 39 39 39 39 39 LCS_GDT L 100 L 100 21 32 39 12 17 20 25 28 30 31 31 32 34 34 36 37 38 39 39 39 39 39 39 LCS_GDT E 101 E 101 21 32 39 12 17 20 25 28 30 31 31 32 34 34 36 37 38 39 39 39 39 39 39 LCS_GDT E 102 E 102 21 32 39 12 17 20 25 28 30 31 31 32 34 34 36 37 38 39 39 39 39 39 39 LCS_GDT A 103 A 103 21 32 39 12 17 20 25 28 30 31 31 32 34 34 36 37 38 39 39 39 39 39 39 LCS_GDT K 104 K 104 21 32 39 12 17 20 25 28 30 31 31 32 34 34 36 37 38 39 39 39 39 39 39 LCS_GDT S 105 S 105 21 32 39 12 17 20 25 28 30 31 31 32 34 34 36 37 38 39 39 39 39 39 39 LCS_GDT I 106 I 106 21 32 39 6 17 20 25 28 30 31 31 32 34 34 36 37 38 39 39 39 39 39 39 LCS_GDT G 107 G 107 21 32 39 12 17 20 25 28 30 31 31 32 34 34 36 37 38 39 39 39 39 39 39 LCS_GDT L 108 L 108 21 32 39 9 17 20 25 28 30 31 31 32 34 34 36 37 38 39 39 39 39 39 39 LCS_GDT D 109 D 109 21 32 39 9 16 18 25 28 30 31 31 32 34 34 36 37 38 39 39 39 39 39 39 LCS_GDT D 110 D 110 21 32 39 9 16 18 25 28 30 31 31 32 34 34 36 37 38 39 39 39 39 39 39 LCS_GDT Q 111 Q 111 21 32 39 9 16 20 25 28 30 31 31 32 34 34 36 37 38 39 39 39 39 39 39 LCS_GDT T 112 T 112 21 32 39 12 17 20 25 28 30 31 31 32 34 34 36 37 38 39 39 39 39 39 39 LCS_GDT A 113 A 113 19 32 39 10 16 19 25 28 30 31 31 32 34 34 36 37 38 39 39 39 39 39 39 LCS_GDT I 114 I 114 19 32 39 10 16 18 24 28 30 31 31 32 34 34 36 37 38 39 39 39 39 39 39 LCS_GDT E 115 E 115 19 32 39 10 16 18 24 28 29 31 31 32 34 34 36 37 38 39 39 39 39 39 39 LCS_GDT L 116 L 116 19 32 39 10 16 18 21 23 27 29 31 32 34 34 36 37 38 39 39 39 39 39 39 LCS_GDT L 117 L 117 19 32 39 10 16 18 21 22 26 28 30 32 34 34 36 37 38 39 39 39 39 39 39 LCS_GDT I 118 I 118 19 32 39 10 16 18 21 23 27 29 31 32 34 34 36 37 38 39 39 39 39 39 39 LCS_GDT K 119 K 119 19 30 39 10 16 18 21 22 26 28 29 31 33 34 36 37 38 39 39 39 39 39 39 LCS_GDT R 120 R 120 19 27 39 10 16 18 21 22 26 28 29 31 33 33 36 37 38 39 39 39 39 39 39 LCS_GDT S 121 S 121 19 27 39 9 16 18 21 22 26 28 29 31 33 33 36 37 38 39 39 39 39 39 39 LCS_GDT R 122 R 122 19 27 39 10 16 18 21 22 26 28 29 31 33 33 36 37 38 39 39 39 39 39 39 LCS_GDT N 123 N 123 19 27 39 9 16 18 21 22 26 28 29 31 33 33 36 37 37 39 39 39 39 39 39 LCS_AVERAGE LCS_A: 77.23 ( 51.08 80.60 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 12 17 20 25 28 30 31 31 32 34 34 36 37 38 39 39 39 39 39 39 GDT PERCENT_AT 30.77 43.59 51.28 64.10 71.79 76.92 79.49 79.49 82.05 87.18 87.18 92.31 94.87 97.44 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.33 0.61 0.83 1.18 1.38 1.60 1.68 1.68 1.86 2.20 2.20 3.02 3.12 3.20 3.40 3.40 3.40 3.40 3.40 3.40 GDT RMS_ALL_AT 3.81 3.78 3.67 3.84 3.66 3.96 3.89 3.89 3.81 3.67 3.67 3.56 3.47 3.41 3.40 3.40 3.40 3.40 3.40 3.40 # Checking swapping # possible swapping detected: D 85 D 85 # possible swapping detected: E 90 E 90 # possible swapping detected: E 97 E 97 # possible swapping detected: E 101 E 101 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA D 85 D 85 3.033 0 0.056 0.131 4.551 55.476 48.750 LGA Q 86 Q 86 3.147 0 0.072 1.230 4.994 55.476 50.529 LGA L 87 L 87 2.084 0 0.029 1.143 4.068 73.095 64.524 LGA K 88 K 88 0.474 0 0.017 0.955 5.943 90.595 70.370 LGA K 89 K 89 1.671 0 0.038 0.920 6.701 79.286 56.349 LGA E 90 E 90 0.861 0 0.062 0.708 1.294 90.595 86.508 LGA L 91 L 91 0.714 0 0.035 1.009 3.016 90.595 81.310 LGA A 92 A 92 1.300 0 0.048 0.058 1.675 81.548 79.810 LGA D 93 D 93 0.941 0 0.063 0.139 1.217 83.690 85.952 LGA A 94 A 94 1.452 0 0.052 0.054 1.849 77.143 76.286 LGA I 95 I 95 2.455 0 0.025 1.177 5.223 64.881 63.214 LGA T 96 T 96 2.101 0 0.030 1.236 3.212 68.810 63.878 LGA E 97 E 97 1.165 0 0.031 1.009 3.534 79.286 71.587 LGA R 98 R 98 1.611 0 0.062 1.094 5.084 77.143 62.771 LGA F 99 F 99 1.694 0 0.018 0.126 2.522 77.143 69.307 LGA L 100 L 100 0.916 0 0.046 1.417 3.176 88.214 77.917 LGA E 101 E 101 0.465 0 0.035 0.976 2.608 92.857 83.968 LGA E 102 E 102 0.649 0 0.040 0.374 2.024 95.238 87.725 LGA A 103 A 103 0.211 0 0.044 0.064 0.500 100.000 100.000 LGA K 104 K 104 0.291 0 0.056 0.832 4.106 95.238 78.413 LGA S 105 S 105 0.854 0 0.122 0.702 1.854 83.810 81.587 LGA I 106 I 106 1.232 0 0.280 1.308 3.815 90.595 79.107 LGA G 107 G 107 0.844 0 0.079 0.079 1.131 88.214 88.214 LGA L 108 L 108 0.903 0 0.171 0.313 1.511 83.810 86.012 LGA D 109 D 109 1.986 0 0.033 0.641 3.164 79.405 68.333 LGA D 110 D 110 1.742 0 0.037 1.130 4.076 77.143 66.548 LGA Q 111 Q 111 0.848 0 0.030 1.133 6.394 85.952 60.000 LGA T 112 T 112 1.800 0 0.043 0.099 3.301 71.071 65.170 LGA A 113 A 113 2.222 0 0.034 0.043 3.306 61.190 61.905 LGA I 114 I 114 2.546 0 0.039 0.082 3.442 57.262 59.107 LGA E 115 E 115 3.096 0 0.052 0.166 5.083 45.833 41.905 LGA L 116 L 116 4.907 0 0.023 0.306 6.278 27.976 30.417 LGA L 117 L 117 5.739 0 0.028 0.957 7.009 20.595 18.512 LGA I 118 I 118 5.641 0 0.048 0.643 7.301 17.738 24.762 LGA K 119 K 119 7.274 0 0.027 0.255 8.862 8.690 7.407 LGA R 120 R 120 8.507 0 0.032 1.068 14.109 2.976 1.775 LGA S 121 S 121 9.104 0 0.138 0.733 10.138 1.190 1.825 LGA R 122 R 122 10.065 0 0.470 1.267 13.475 0.476 0.476 LGA N 123 N 123 10.284 0 0.403 0.861 13.324 0.000 2.202 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 39 156 156 100.00 313 313 100.00 39 SUMMARY(RMSD_GDC): 3.398 3.458 4.015 64.621 59.088 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 39 39 4.0 31 1.68 71.795 76.595 1.746 LGA_LOCAL RMSD: 1.675 Number of atoms: 31 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 3.893 Number of assigned atoms: 39 Std_ASGN_ATOMS RMSD: 3.398 Standard rmsd on all 39 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.584077 * X + 0.175621 * Y + 0.792472 * Z + -22.684675 Y_new = -0.194499 * X + -0.978151 * Y + 0.073417 * Z + 54.550533 Z_new = 0.788051 * X + -0.111254 * Y + 0.605474 * Z + -35.356312 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.820139 -0.907636 -0.181720 [DEG: -161.5821 -52.0037 -10.4118 ] ZXZ: 1.663176 0.920435 1.711046 [DEG: 95.2930 52.7371 98.0357 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0586TS481_1-D2 REMARK 2: T0586-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0586TS481_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 39 39 4.0 31 1.68 76.595 3.40 REMARK ---------------------------------------------------------- MOLECULE T0586TS481_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0586 REMARK MODEL 1 REMARK PARENT 3BY6_A ATOM 668 N ASP 85 3.209 19.052 17.770 1.00 0.00 N ATOM 669 CA ASP 85 2.937 17.806 18.409 1.00 0.00 C ATOM 670 CB ASP 85 3.140 17.871 19.931 1.00 0.00 C ATOM 671 CG ASP 85 4.623 18.035 20.228 1.00 0.00 C ATOM 672 OD1 ASP 85 5.446 17.832 19.296 1.00 0.00 O ATOM 673 OD2 ASP 85 4.953 18.360 21.399 1.00 0.00 O ATOM 674 C ASP 85 1.503 17.459 18.180 1.00 0.00 C ATOM 675 O ASP 85 1.173 16.310 17.891 1.00 0.00 O ATOM 676 N GLN 86 0.612 18.458 18.281 1.00 0.00 N ATOM 677 CA GLN 86 -0.791 18.186 18.176 1.00 0.00 C ATOM 678 CB GLN 86 -1.656 19.444 18.368 1.00 0.00 C ATOM 679 CG GLN 86 -3.160 19.166 18.325 1.00 0.00 C ATOM 680 CD GLN 86 -3.888 20.486 18.530 1.00 0.00 C ATOM 681 OE1 GLN 86 -3.862 21.361 17.665 1.00 0.00 O ATOM 682 NE2 GLN 86 -4.563 20.636 19.701 1.00 0.00 N ATOM 683 C GLN 86 -1.076 17.643 16.819 1.00 0.00 C ATOM 684 O GLN 86 -1.809 16.666 16.669 1.00 0.00 O ATOM 685 N LEU 87 -0.464 18.252 15.793 1.00 0.00 N ATOM 686 CA LEU 87 -0.684 17.871 14.432 1.00 0.00 C ATOM 687 CB LEU 87 0.080 18.819 13.489 1.00 0.00 C ATOM 688 CG LEU 87 -0.065 18.539 11.988 1.00 0.00 C ATOM 689 CD1 LEU 87 0.722 17.293 11.578 1.00 0.00 C ATOM 690 CD2 LEU 87 -1.544 18.490 11.566 1.00 0.00 C ATOM 691 C LEU 87 -0.206 16.460 14.252 1.00 0.00 C ATOM 692 O LEU 87 -0.869 15.650 13.608 1.00 0.00 O ATOM 693 N LYS 88 0.949 16.120 14.853 1.00 0.00 N ATOM 694 CA LYS 88 1.524 14.814 14.689 1.00 0.00 C ATOM 695 CB LYS 88 2.880 14.678 15.408 1.00 0.00 C ATOM 696 CG LYS 88 3.725 13.463 14.997 1.00 0.00 C ATOM 697 CD LYS 88 3.089 12.099 15.273 1.00 0.00 C ATOM 698 CE LYS 88 4.064 10.922 15.147 1.00 0.00 C ATOM 699 NZ LYS 88 4.726 10.935 13.825 1.00 0.00 N ATOM 700 C LYS 88 0.595 13.796 15.260 1.00 0.00 C ATOM 701 O LYS 88 0.407 12.723 14.691 1.00 0.00 O ATOM 702 N LYS 89 -0.029 14.116 16.402 1.00 0.00 N ATOM 703 CA LYS 89 -0.881 13.172 17.055 1.00 0.00 C ATOM 704 CB LYS 89 -1.357 13.704 18.406 1.00 0.00 C ATOM 705 CG LYS 89 -0.125 13.935 19.274 1.00 0.00 C ATOM 706 CD LYS 89 -0.315 14.850 20.472 1.00 0.00 C ATOM 707 CE LYS 89 1.029 15.397 20.947 1.00 0.00 C ATOM 708 NZ LYS 89 2.053 14.328 20.883 1.00 0.00 N ATOM 709 C LYS 89 -2.043 12.861 16.171 1.00 0.00 C ATOM 710 O LYS 89 -2.488 11.717 16.095 1.00 0.00 O ATOM 711 N GLU 90 -2.548 13.874 15.453 1.00 0.00 N ATOM 712 CA GLU 90 -3.679 13.659 14.604 1.00 0.00 C ATOM 713 CB GLU 90 -4.113 14.952 13.895 1.00 0.00 C ATOM 714 CG GLU 90 -5.399 14.812 13.087 1.00 0.00 C ATOM 715 CD GLU 90 -5.870 16.214 12.721 1.00 0.00 C ATOM 716 OE1 GLU 90 -5.676 17.138 13.555 1.00 0.00 O ATOM 717 OE2 GLU 90 -6.429 16.381 11.604 1.00 0.00 O ATOM 718 C GLU 90 -3.300 12.644 13.571 1.00 0.00 C ATOM 719 O GLU 90 -4.068 11.727 13.282 1.00 0.00 O ATOM 720 N LEU 91 -2.084 12.764 13.002 1.00 0.00 N ATOM 721 CA LEU 91 -1.671 11.824 12.002 1.00 0.00 C ATOM 722 CB LEU 91 -0.285 12.113 11.400 1.00 0.00 C ATOM 723 CG LEU 91 -0.263 13.292 10.412 1.00 0.00 C ATOM 724 CD1 LEU 91 -1.109 12.976 9.171 1.00 0.00 C ATOM 725 CD2 LEU 91 -0.659 14.611 11.083 1.00 0.00 C ATOM 726 C LEU 91 -1.604 10.476 12.629 1.00 0.00 C ATOM 727 O LEU 91 -2.002 9.482 12.026 1.00 0.00 O ATOM 728 N ALA 92 -1.112 10.419 13.876 1.00 0.00 N ATOM 729 CA ALA 92 -0.974 9.166 14.546 1.00 0.00 C ATOM 730 CB ALA 92 -0.406 9.304 15.969 1.00 0.00 C ATOM 731 C ALA 92 -2.333 8.569 14.653 1.00 0.00 C ATOM 732 O ALA 92 -2.497 7.362 14.502 1.00 0.00 O ATOM 733 N ASP 93 -3.352 9.405 14.910 1.00 0.00 N ATOM 734 CA ASP 93 -4.673 8.885 15.071 1.00 0.00 C ATOM 735 CB ASP 93 -5.704 9.988 15.363 1.00 0.00 C ATOM 736 CG ASP 93 -5.399 10.552 16.743 1.00 0.00 C ATOM 737 OD1 ASP 93 -4.845 9.791 17.581 1.00 0.00 O ATOM 738 OD2 ASP 93 -5.709 11.750 16.976 1.00 0.00 O ATOM 739 C ASP 93 -5.089 8.196 13.809 1.00 0.00 C ATOM 740 O ASP 93 -5.600 7.078 13.847 1.00 0.00 O ATOM 741 N ALA 94 -4.859 8.836 12.646 1.00 0.00 N ATOM 742 CA ALA 94 -5.310 8.248 11.418 1.00 0.00 C ATOM 743 CB ALA 94 -5.015 9.131 10.193 1.00 0.00 C ATOM 744 C ALA 94 -4.612 6.947 11.192 1.00 0.00 C ATOM 745 O ALA 94 -5.244 5.937 10.880 1.00 0.00 O ATOM 746 N ILE 95 -3.279 6.934 11.364 1.00 0.00 N ATOM 747 CA ILE 95 -2.520 5.746 11.115 1.00 0.00 C ATOM 748 CB ILE 95 -1.035 5.986 11.091 1.00 0.00 C ATOM 749 CG2 ILE 95 -0.709 6.824 9.848 1.00 0.00 C ATOM 750 CG1 ILE 95 -0.531 6.597 12.405 1.00 0.00 C ATOM 751 CD1 ILE 95 0.988 6.755 12.442 1.00 0.00 C ATOM 752 C ILE 95 -2.865 4.683 12.105 1.00 0.00 C ATOM 753 O ILE 95 -3.006 3.515 11.749 1.00 0.00 O ATOM 754 N THR 96 -3.030 5.068 13.377 1.00 0.00 N ATOM 755 CA THR 96 -3.274 4.119 14.416 1.00 0.00 C ATOM 756 CB THR 96 -3.292 4.737 15.788 1.00 0.00 C ATOM 757 OG1 THR 96 -3.105 3.731 16.768 1.00 0.00 O ATOM 758 CG2 THR 96 -4.646 5.419 16.026 1.00 0.00 C ATOM 759 C THR 96 -4.590 3.452 14.182 1.00 0.00 C ATOM 760 O THR 96 -4.742 2.261 14.446 1.00 0.00 O ATOM 761 N GLU 97 -5.580 4.195 13.657 1.00 0.00 N ATOM 762 CA GLU 97 -6.890 3.634 13.501 1.00 0.00 C ATOM 763 CB GLU 97 -7.872 4.619 12.856 1.00 0.00 C ATOM 764 CG GLU 97 -8.136 5.838 13.738 1.00 0.00 C ATOM 765 CD GLU 97 -9.059 6.785 12.990 1.00 0.00 C ATOM 766 OE1 GLU 97 -9.590 6.375 11.924 1.00 0.00 O ATOM 767 OE2 GLU 97 -9.236 7.935 13.473 1.00 0.00 O ATOM 768 C GLU 97 -6.800 2.433 12.621 1.00 0.00 C ATOM 769 O GLU 97 -7.413 1.403 12.903 1.00 0.00 O ATOM 770 N ARG 98 -6.014 2.525 11.537 1.00 0.00 N ATOM 771 CA ARG 98 -5.929 1.409 10.644 1.00 0.00 C ATOM 772 CB ARG 98 -5.022 1.664 9.431 1.00 0.00 C ATOM 773 CG ARG 98 -5.442 2.857 8.572 1.00 0.00 C ATOM 774 CD ARG 98 -4.766 2.877 7.198 1.00 0.00 C ATOM 775 NE ARG 98 -3.307 2.661 7.412 1.00 0.00 N ATOM 776 CZ ARG 98 -2.404 3.068 6.472 1.00 0.00 C ATOM 777 NH1 ARG 98 -2.827 3.759 5.375 1.00 0.00 H ATOM 778 NH2 ARG 98 -1.078 2.783 6.636 1.00 0.00 H ATOM 779 C ARG 98 -5.328 0.268 11.395 1.00 0.00 C ATOM 780 O ARG 98 -5.761 -0.876 11.262 1.00 0.00 O ATOM 781 N PHE 99 -4.323 0.579 12.234 1.00 0.00 N ATOM 782 CA PHE 99 -3.566 -0.390 12.973 1.00 0.00 C ATOM 783 CB PHE 99 -2.509 0.283 13.863 1.00 0.00 C ATOM 784 CG PHE 99 -1.783 -0.772 14.619 1.00 0.00 C ATOM 785 CD1 PHE 99 -0.773 -1.494 14.027 1.00 0.00 C ATOM 786 CD2 PHE 99 -2.108 -1.028 15.930 1.00 0.00 C ATOM 787 CE1 PHE 99 -0.106 -2.467 14.733 1.00 0.00 C ATOM 788 CE2 PHE 99 -1.441 -1.998 16.639 1.00 0.00 C ATOM 789 CZ PHE 99 -0.438 -2.721 16.041 1.00 0.00 C ATOM 790 C PHE 99 -4.480 -1.180 13.858 1.00 0.00 C ATOM 791 O PHE 99 -4.411 -2.408 13.887 1.00 0.00 O ATOM 792 N LEU 100 -5.376 -0.504 14.595 1.00 0.00 N ATOM 793 CA LEU 100 -6.227 -1.197 15.516 1.00 0.00 C ATOM 794 CB LEU 100 -7.063 -0.238 16.380 1.00 0.00 C ATOM 795 CG LEU 100 -7.952 -0.951 17.409 1.00 0.00 C ATOM 796 CD1 LEU 100 -7.113 -1.819 18.356 1.00 0.00 C ATOM 797 CD2 LEU 100 -8.815 0.058 18.180 1.00 0.00 C ATOM 798 C LEU 100 -7.144 -2.110 14.758 1.00 0.00 C ATOM 799 O LEU 100 -7.407 -3.234 15.181 1.00 0.00 O ATOM 800 N GLU 101 -7.644 -1.654 13.597 1.00 0.00 N ATOM 801 CA GLU 101 -8.568 -2.448 12.841 1.00 0.00 C ATOM 802 CB GLU 101 -9.008 -1.750 11.546 1.00 0.00 C ATOM 803 CG GLU 101 -10.191 -2.430 10.862 1.00 0.00 C ATOM 804 CD GLU 101 -11.430 -2.001 11.628 1.00 0.00 C ATOM 805 OE1 GLU 101 -11.589 -0.765 11.822 1.00 0.00 O ATOM 806 OE2 GLU 101 -12.223 -2.890 12.038 1.00 0.00 O ATOM 807 C GLU 101 -7.886 -3.716 12.435 1.00 0.00 C ATOM 808 O GLU 101 -8.464 -4.800 12.514 1.00 0.00 O ATOM 809 N GLU 102 -6.615 -3.610 12.008 1.00 0.00 N ATOM 810 CA GLU 102 -5.879 -4.750 11.548 1.00 0.00 C ATOM 811 CB GLU 102 -4.436 -4.395 11.140 1.00 0.00 C ATOM 812 CG GLU 102 -3.624 -5.594 10.647 1.00 0.00 C ATOM 813 CD GLU 102 -2.218 -5.110 10.317 1.00 0.00 C ATOM 814 OE1 GLU 102 -2.076 -3.924 9.917 1.00 0.00 O ATOM 815 OE2 GLU 102 -1.265 -5.918 10.471 1.00 0.00 O ATOM 816 C GLU 102 -5.777 -5.707 12.689 1.00 0.00 C ATOM 817 O GLU 102 -5.891 -6.919 12.514 1.00 0.00 O ATOM 818 N ALA 103 -5.587 -5.169 13.906 1.00 0.00 N ATOM 819 CA ALA 103 -5.422 -5.998 15.062 1.00 0.00 C ATOM 820 CB ALA 103 -5.260 -5.192 16.362 1.00 0.00 C ATOM 821 C ALA 103 -6.647 -6.824 15.209 1.00 0.00 C ATOM 822 O ALA 103 -6.576 -8.007 15.537 1.00 0.00 O ATOM 823 N LYS 104 -7.816 -6.215 14.958 1.00 0.00 N ATOM 824 CA LYS 104 -9.038 -6.949 15.070 1.00 0.00 C ATOM 825 CB LYS 104 -10.275 -6.119 14.677 1.00 0.00 C ATOM 826 CG LYS 104 -10.763 -5.129 15.739 1.00 0.00 C ATOM 827 CD LYS 104 -11.318 -5.798 16.998 1.00 0.00 C ATOM 828 CE LYS 104 -11.958 -4.816 17.982 1.00 0.00 C ATOM 829 NZ LYS 104 -12.690 -5.559 19.033 1.00 0.00 N ATOM 830 C LYS 104 -8.963 -8.083 14.094 1.00 0.00 C ATOM 831 O LYS 104 -9.333 -9.211 14.414 1.00 0.00 O ATOM 832 N SER 105 -8.450 -7.816 12.875 1.00 0.00 N ATOM 833 CA SER 105 -8.387 -8.828 11.856 1.00 0.00 C ATOM 834 CB SER 105 -7.747 -8.327 10.551 1.00 0.00 C ATOM 835 OG SER 105 -8.535 -7.292 9.984 1.00 0.00 O ATOM 836 C SER 105 -7.531 -9.945 12.349 1.00 0.00 C ATOM 837 O SER 105 -7.832 -11.119 12.136 1.00 0.00 O ATOM 838 N ILE 106 -6.433 -9.601 13.037 1.00 0.00 N ATOM 839 CA ILE 106 -5.555 -10.607 13.545 1.00 0.00 C ATOM 840 CB ILE 106 -4.370 -10.039 14.272 1.00 0.00 C ATOM 841 CG2 ILE 106 -3.634 -11.202 14.953 1.00 0.00 C ATOM 842 CG1 ILE 106 -3.490 -9.221 13.311 1.00 0.00 C ATOM 843 CD1 ILE 106 -2.406 -8.405 14.012 1.00 0.00 C ATOM 844 C ILE 106 -6.335 -11.415 14.529 1.00 0.00 C ATOM 845 O ILE 106 -6.222 -12.640 14.569 1.00 0.00 O ATOM 846 N GLY 107 -7.182 -10.742 15.330 1.00 0.00 N ATOM 847 CA GLY 107 -7.907 -11.438 16.349 1.00 0.00 C ATOM 848 C GLY 107 -7.100 -11.305 17.590 1.00 0.00 C ATOM 849 O GLY 107 -7.278 -12.045 18.556 1.00 0.00 O ATOM 850 N LEU 108 -6.175 -10.334 17.576 1.00 0.00 N ATOM 851 CA LEU 108 -5.320 -10.112 18.694 1.00 0.00 C ATOM 852 CB LEU 108 -4.224 -9.084 18.364 1.00 0.00 C ATOM 853 CG LEU 108 -3.045 -9.059 19.341 1.00 0.00 C ATOM 854 CD1 LEU 108 -2.239 -10.365 19.238 1.00 0.00 C ATOM 855 CD2 LEU 108 -2.180 -7.807 19.140 1.00 0.00 C ATOM 856 C LEU 108 -6.205 -9.571 19.777 1.00 0.00 C ATOM 857 O LEU 108 -7.157 -8.842 19.501 1.00 0.00 O ATOM 858 N ASP 109 -5.932 -9.939 21.044 1.00 0.00 N ATOM 859 CA ASP 109 -6.785 -9.501 22.113 1.00 0.00 C ATOM 860 CB ASP 109 -6.616 -10.282 23.431 1.00 0.00 C ATOM 861 CG ASP 109 -5.200 -10.090 23.938 1.00 0.00 C ATOM 862 OD1 ASP 109 -4.320 -9.772 23.098 1.00 0.00 O ATOM 863 OD2 ASP 109 -4.979 -10.263 25.165 1.00 0.00 O ATOM 864 C ASP 109 -6.545 -8.054 22.379 1.00 0.00 C ATOM 865 O ASP 109 -5.514 -7.492 22.012 1.00 0.00 O ATOM 866 N ASP 110 -7.541 -7.422 23.025 1.00 0.00 N ATOM 867 CA ASP 110 -7.528 -6.018 23.306 1.00 0.00 C ATOM 868 CB ASP 110 -8.848 -5.544 23.935 1.00 0.00 C ATOM 869 CG ASP 110 -8.888 -4.025 23.868 1.00 0.00 C ATOM 870 OD1 ASP 110 -7.898 -3.379 24.301 1.00 0.00 O ATOM 871 OD2 ASP 110 -9.906 -3.483 23.363 1.00 0.00 O ATOM 872 C ASP 110 -6.416 -5.708 24.254 1.00 0.00 C ATOM 873 O ASP 110 -5.737 -4.690 24.129 1.00 0.00 O ATOM 874 N GLN 111 -6.185 -6.601 25.225 1.00 0.00 N ATOM 875 CA GLN 111 -5.178 -6.349 26.211 1.00 0.00 C ATOM 876 CB GLN 111 -5.052 -7.527 27.187 1.00 0.00 C ATOM 877 CG GLN 111 -3.951 -7.359 28.226 1.00 0.00 C ATOM 878 CD GLN 111 -3.910 -8.626 29.067 1.00 0.00 C ATOM 879 OE1 GLN 111 -4.739 -9.522 28.915 1.00 0.00 O ATOM 880 NE2 GLN 111 -2.914 -8.707 29.988 1.00 0.00 N ATOM 881 C GLN 111 -3.860 -6.206 25.526 1.00 0.00 C ATOM 882 O GLN 111 -3.110 -5.268 25.791 1.00 0.00 O ATOM 883 N THR 112 -3.554 -7.135 24.605 1.00 0.00 N ATOM 884 CA THR 112 -2.292 -7.073 23.940 1.00 0.00 C ATOM 885 CB THR 112 -1.972 -8.272 23.104 1.00 0.00 C ATOM 886 OG1 THR 112 -1.906 -9.428 23.924 1.00 0.00 O ATOM 887 CG2 THR 112 -0.615 -8.037 22.427 1.00 0.00 C ATOM 888 C THR 112 -2.255 -5.860 23.076 1.00 0.00 C ATOM 889 O THR 112 -1.216 -5.217 22.944 1.00 0.00 O ATOM 890 N ALA 113 -3.403 -5.503 22.477 1.00 0.00 N ATOM 891 CA ALA 113 -3.435 -4.386 21.584 1.00 0.00 C ATOM 892 CB ALA 113 -4.841 -4.113 21.021 1.00 0.00 C ATOM 893 C ALA 113 -3.009 -3.169 22.335 1.00 0.00 C ATOM 894 O ALA 113 -2.223 -2.370 21.831 1.00 0.00 O ATOM 895 N ILE 114 -3.483 -3.005 23.581 1.00 0.00 N ATOM 896 CA ILE 114 -3.140 -1.825 24.316 1.00 0.00 C ATOM 897 CB ILE 114 -3.754 -1.789 25.680 1.00 0.00 C ATOM 898 CG2 ILE 114 -3.052 -0.697 26.501 1.00 0.00 C ATOM 899 CG1 ILE 114 -5.275 -1.608 25.563 1.00 0.00 C ATOM 900 CD1 ILE 114 -6.019 -1.814 26.879 1.00 0.00 C ATOM 901 C ILE 114 -1.659 -1.785 24.474 1.00 0.00 C ATOM 902 O ILE 114 -1.034 -0.738 24.307 1.00 0.00 O ATOM 903 N GLU 115 -1.054 -2.940 24.786 1.00 0.00 N ATOM 904 CA GLU 115 0.359 -2.990 24.992 1.00 0.00 C ATOM 905 CB GLU 115 0.823 -4.410 25.339 1.00 0.00 C ATOM 906 CG GLU 115 2.324 -4.543 25.571 1.00 0.00 C ATOM 907 CD GLU 115 2.554 -5.940 26.126 1.00 0.00 C ATOM 908 OE1 GLU 115 1.934 -6.254 27.176 1.00 0.00 O ATOM 909 OE2 GLU 115 3.337 -6.711 25.510 1.00 0.00 O ATOM 910 C GLU 115 1.040 -2.574 23.729 1.00 0.00 C ATOM 911 O GLU 115 1.979 -1.781 23.759 1.00 0.00 O ATOM 912 N LEU 116 0.572 -3.088 22.576 1.00 0.00 N ATOM 913 CA LEU 116 1.204 -2.762 21.327 1.00 0.00 C ATOM 914 CB LEU 116 0.635 -3.529 20.120 1.00 0.00 C ATOM 915 CG LEU 116 1.010 -5.022 20.122 1.00 0.00 C ATOM 916 CD1 LEU 116 0.453 -5.742 18.885 1.00 0.00 C ATOM 917 CD2 LEU 116 2.527 -5.210 20.269 1.00 0.00 C ATOM 918 C LEU 116 1.056 -1.304 21.043 1.00 0.00 C ATOM 919 O LEU 116 2.006 -0.663 20.596 1.00 0.00 O ATOM 920 N LEU 117 -0.131 -0.726 21.301 1.00 0.00 N ATOM 921 CA LEU 117 -0.273 0.662 20.975 1.00 0.00 C ATOM 922 CB LEU 117 -1.656 1.287 21.257 1.00 0.00 C ATOM 923 CG LEU 117 -2.756 1.029 20.206 1.00 0.00 C ATOM 924 CD1 LEU 117 -3.211 -0.433 20.168 1.00 0.00 C ATOM 925 CD2 LEU 117 -3.925 2.010 20.384 1.00 0.00 C ATOM 926 C LEU 117 0.703 1.457 21.770 1.00 0.00 C ATOM 927 O LEU 117 1.338 2.368 21.242 1.00 0.00 O ATOM 928 N ILE 118 0.872 1.123 23.060 1.00 0.00 N ATOM 929 CA ILE 118 1.741 1.915 23.877 1.00 0.00 C ATOM 930 CB ILE 118 1.856 1.390 25.281 1.00 0.00 C ATOM 931 CG2 ILE 118 2.932 2.214 26.006 1.00 0.00 C ATOM 932 CG1 ILE 118 0.488 1.396 25.981 1.00 0.00 C ATOM 933 CD1 ILE 118 -0.137 2.784 26.098 1.00 0.00 C ATOM 934 C ILE 118 3.108 1.854 23.288 1.00 0.00 C ATOM 935 O ILE 118 3.774 2.874 23.118 1.00 0.00 O ATOM 936 N LYS 119 3.555 0.639 22.936 1.00 0.00 N ATOM 937 CA LYS 119 4.880 0.466 22.429 1.00 0.00 C ATOM 938 CB LYS 119 5.202 -1.011 22.160 1.00 0.00 C ATOM 939 CG LYS 119 6.692 -1.295 21.984 1.00 0.00 C ATOM 940 CD LYS 119 7.025 -2.786 22.041 1.00 0.00 C ATOM 941 CE LYS 119 8.518 -3.076 22.193 1.00 0.00 C ATOM 942 NZ LYS 119 9.252 -2.604 20.999 1.00 0.00 N ATOM 943 C LYS 119 5.026 1.209 21.138 1.00 0.00 C ATOM 944 O LYS 119 6.025 1.895 20.926 1.00 0.00 O ATOM 945 N ARG 120 4.032 1.106 20.235 1.00 0.00 N ATOM 946 CA ARG 120 4.181 1.748 18.961 1.00 0.00 C ATOM 947 CB ARG 120 3.094 1.373 17.931 1.00 0.00 C ATOM 948 CG ARG 120 1.664 1.797 18.254 1.00 0.00 C ATOM 949 CD ARG 120 0.635 1.127 17.340 1.00 0.00 C ATOM 950 NE ARG 120 1.149 1.211 15.943 1.00 0.00 N ATOM 951 CZ ARG 120 0.910 2.304 15.162 1.00 0.00 C ATOM 952 NH1 ARG 120 0.194 3.355 15.656 1.00 0.00 H ATOM 953 NH2 ARG 120 1.388 2.351 13.885 1.00 0.00 H ATOM 954 C ARG 120 4.196 3.230 19.149 1.00 0.00 C ATOM 955 O ARG 120 4.979 3.936 18.513 1.00 0.00 O ATOM 956 N SER 121 3.338 3.742 20.050 1.00 0.00 N ATOM 957 CA SER 121 3.270 5.159 20.244 1.00 0.00 C ATOM 958 CB SER 121 2.266 5.578 21.336 1.00 0.00 C ATOM 959 OG SER 121 0.937 5.295 20.924 1.00 0.00 O ATOM 960 C SER 121 4.613 5.642 20.675 1.00 0.00 C ATOM 961 O SER 121 5.217 6.492 20.022 1.00 0.00 O ATOM 962 N ARG 122 5.122 5.085 21.786 1.00 0.00 N ATOM 963 CA ARG 122 6.386 5.515 22.291 1.00 0.00 C ATOM 964 CB ARG 122 6.401 5.556 23.825 1.00 0.00 C ATOM 965 CG ARG 122 7.631 6.215 24.437 1.00 0.00 C ATOM 966 CD ARG 122 7.583 6.218 25.963 1.00 0.00 C ATOM 967 NE ARG 122 6.268 6.797 26.354 1.00 0.00 N ATOM 968 CZ ARG 122 6.083 8.149 26.341 1.00 0.00 C ATOM 969 NH1 ARG 122 7.097 8.969 25.941 1.00 0.00 H ATOM 970 NH2 ARG 122 4.880 8.674 26.714 1.00 0.00 H ATOM 971 C ARG 122 7.377 4.489 21.863 1.00 0.00 C ATOM 972 O ARG 122 7.605 3.498 22.553 1.00 0.00 O ATOM 973 N ASN 123 7.990 4.705 20.686 1.00 0.00 N ATOM 974 CA ASN 123 8.973 3.783 20.209 1.00 0.00 C ATOM 975 CB ASN 123 9.027 3.690 18.672 1.00 0.00 C ATOM 976 CG ASN 123 9.806 2.443 18.256 1.00 0.00 C ATOM 977 OD1 ASN 123 10.408 1.739 19.064 1.00 0.00 O ATOM 978 ND2 ASN 123 9.782 2.152 16.928 1.00 0.00 N ATOM 979 C ASN 123 10.279 4.321 20.670 1.00 0.00 C ATOM 980 O ASN 123 10.418 5.523 20.895 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 313 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 23.74 93.4 76 100.0 76 ARMSMC SECONDARY STRUCTURE . . 5.55 100.0 64 100.0 64 ARMSMC SURFACE . . . . . . . . 24.37 93.1 72 100.0 72 ARMSMC BURIED . . . . . . . . 4.74 100.0 4 100.0 4 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 81.08 50.0 34 100.0 34 ARMSSC1 RELIABLE SIDE CHAINS . 81.08 50.0 34 100.0 34 ARMSSC1 SECONDARY STRUCTURE . . 80.95 50.0 28 100.0 28 ARMSSC1 SURFACE . . . . . . . . 81.08 50.0 34 100.0 34 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 69.14 60.0 30 100.0 30 ARMSSC2 RELIABLE SIDE CHAINS . 63.79 65.2 23 100.0 23 ARMSSC2 SECONDARY STRUCTURE . . 74.74 58.3 24 100.0 24 ARMSSC2 SURFACE . . . . . . . . 69.14 60.0 30 100.0 30 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 68.12 42.9 14 100.0 14 ARMSSC3 RELIABLE SIDE CHAINS . 61.12 50.0 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 60.91 46.2 13 100.0 13 ARMSSC3 SURFACE . . . . . . . . 68.12 42.9 14 100.0 14 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 105.16 28.6 7 100.0 7 ARMSSC4 RELIABLE SIDE CHAINS . 105.16 28.6 7 100.0 7 ARMSSC4 SECONDARY STRUCTURE . . 105.81 33.3 6 100.0 6 ARMSSC4 SURFACE . . . . . . . . 105.16 28.6 7 100.0 7 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 3.40 (Number of atoms: 39) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 3.40 39 100.0 39 CRMSCA CRN = ALL/NP . . . . . 0.0871 CRMSCA SECONDARY STRUCTURE . . 3.00 32 100.0 32 CRMSCA SURFACE . . . . . . . . 3.48 37 100.0 37 CRMSCA BURIED . . . . . . . . 1.09 2 100.0 2 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 3.50 194 100.0 194 CRMSMC SECONDARY STRUCTURE . . 3.06 160 100.0 160 CRMSMC SURFACE . . . . . . . . 3.58 184 100.0 184 CRMSMC BURIED . . . . . . . . 1.27 10 100.0 10 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 4.55 157 100.0 157 CRMSSC RELIABLE SIDE CHAINS . 4.55 139 100.0 139 CRMSSC SECONDARY STRUCTURE . . 4.24 130 100.0 130 CRMSSC SURFACE . . . . . . . . 4.58 155 100.0 155 CRMSSC BURIED . . . . . . . . 1.44 2 100.0 2 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 4.05 313 100.0 313 CRMSALL SECONDARY STRUCTURE . . 3.69 258 100.0 258 CRMSALL SURFACE . . . . . . . . 4.11 303 100.0 303 CRMSALL BURIED . . . . . . . . 1.27 10 100.0 10 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.701 1.000 0.500 39 100.0 39 ERRCA SECONDARY STRUCTURE . . 2.451 1.000 0.500 32 100.0 32 ERRCA SURFACE . . . . . . . . 2.792 1.000 0.500 37 100.0 37 ERRCA BURIED . . . . . . . . 1.030 1.000 0.500 2 100.0 2 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.760 1.000 0.500 194 100.0 194 ERRMC SECONDARY STRUCTURE . . 2.481 1.000 0.500 160 100.0 160 ERRMC SURFACE . . . . . . . . 2.847 1.000 0.500 184 100.0 184 ERRMC BURIED . . . . . . . . 1.144 1.000 0.500 10 100.0 10 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.856 1.000 0.500 157 100.0 157 ERRSC RELIABLE SIDE CHAINS . 3.815 1.000 0.500 139 100.0 139 ERRSC SECONDARY STRUCTURE . . 3.613 1.000 0.500 130 100.0 130 ERRSC SURFACE . . . . . . . . 3.890 1.000 0.500 155 100.0 155 ERRSC BURIED . . . . . . . . 1.270 1.000 0.500 2 100.0 2 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.283 1.000 0.500 313 100.0 313 ERRALL SECONDARY STRUCTURE . . 3.032 1.000 0.500 258 100.0 258 ERRALL SURFACE . . . . . . . . 3.354 1.000 0.500 303 100.0 303 ERRALL BURIED . . . . . . . . 1.144 1.000 0.500 10 100.0 10 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 7 21 25 32 39 39 39 DISTCA CA (P) 17.95 53.85 64.10 82.05 100.00 39 DISTCA CA (RMS) 0.77 1.24 1.49 2.16 3.40 DISTCA ALL (N) 40 125 181 243 308 313 313 DISTALL ALL (P) 12.78 39.94 57.83 77.64 98.40 313 DISTALL ALL (RMS) 0.81 1.33 1.78 2.50 3.83 DISTALL END of the results output