####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 39 ( 313), selected 39 , name T0586TS457_1-D2 # Molecule2: number of CA atoms 39 ( 313), selected 39 , name T0586-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0586TS457_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 39 85 - 123 1.31 1.31 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 39 85 - 123 1.31 1.31 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 32 85 - 116 0.99 1.70 LCS_AVERAGE: 78.37 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 39 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT D 85 D 85 32 39 39 13 24 31 37 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT Q 86 Q 86 32 39 39 18 24 31 37 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 87 L 87 32 39 39 18 24 31 37 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 88 K 88 32 39 39 18 24 31 37 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 89 K 89 32 39 39 18 24 31 37 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 90 E 90 32 39 39 15 24 31 37 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 91 L 91 32 39 39 17 24 31 37 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 92 A 92 32 39 39 18 24 31 37 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT D 93 D 93 32 39 39 18 24 31 37 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 94 A 94 32 39 39 18 24 31 37 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 95 I 95 32 39 39 18 24 31 37 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT T 96 T 96 32 39 39 13 24 30 37 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 97 E 97 32 39 39 18 24 31 37 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT R 98 R 98 32 39 39 18 24 31 37 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT F 99 F 99 32 39 39 18 24 31 37 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 100 L 100 32 39 39 18 24 31 37 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 101 E 101 32 39 39 18 24 31 37 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 102 E 102 32 39 39 18 24 31 37 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 103 A 103 32 39 39 18 24 31 37 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 104 K 104 32 39 39 18 24 31 37 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT S 105 S 105 32 39 39 18 24 31 37 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 106 I 106 32 39 39 18 24 31 37 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT G 107 G 107 32 39 39 17 24 31 37 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 108 L 108 32 39 39 13 24 31 37 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT D 109 D 109 32 39 39 10 21 31 37 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT D 110 D 110 32 39 39 10 19 31 37 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT Q 111 Q 111 32 39 39 10 19 31 37 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT T 112 T 112 32 39 39 10 21 31 37 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 113 A 113 32 39 39 10 20 31 37 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 114 I 114 32 39 39 9 19 30 37 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 115 E 115 32 39 39 9 21 31 37 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 116 L 116 32 39 39 9 19 31 37 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 117 L 117 24 39 39 9 19 30 37 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 118 I 118 24 39 39 10 19 31 37 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 119 K 119 24 39 39 10 19 31 37 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT R 120 R 120 24 39 39 6 19 23 32 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT S 121 S 121 24 39 39 5 19 23 37 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT R 122 R 122 24 39 39 6 19 30 37 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT N 123 N 123 24 39 39 10 19 25 37 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_AVERAGE LCS_A: 92.79 ( 78.37 100.00 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 18 24 31 37 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 GDT PERCENT_AT 46.15 61.54 79.49 94.87 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.39 0.53 0.98 1.22 1.31 1.31 1.31 1.31 1.31 1.31 1.31 1.31 1.31 1.31 1.31 1.31 1.31 1.31 1.31 1.31 GDT RMS_ALL_AT 4.23 3.63 1.60 1.33 1.31 1.31 1.31 1.31 1.31 1.31 1.31 1.31 1.31 1.31 1.31 1.31 1.31 1.31 1.31 1.31 # Checking swapping # possible swapping detected: D 85 D 85 # possible swapping detected: E 90 E 90 # possible swapping detected: E 101 E 101 # possible swapping detected: D 109 D 109 # possible swapping detected: E 115 E 115 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA D 85 D 85 1.140 0 0.039 0.079 1.662 83.690 81.488 LGA Q 86 Q 86 1.171 0 0.087 0.944 3.081 83.690 76.138 LGA L 87 L 87 0.419 0 0.011 1.394 4.934 97.619 74.940 LGA K 88 K 88 0.908 0 0.065 0.126 2.798 88.214 78.942 LGA K 89 K 89 1.145 0 0.023 0.692 2.189 88.214 81.640 LGA E 90 E 90 0.391 0 0.059 0.667 2.640 97.619 81.587 LGA L 91 L 91 0.722 0 0.048 0.093 1.165 92.857 89.405 LGA A 92 A 92 1.428 0 0.015 0.017 1.820 81.429 79.714 LGA D 93 D 93 1.049 0 0.059 0.109 2.283 85.952 79.464 LGA A 94 A 94 0.605 0 0.013 0.014 1.158 92.857 90.571 LGA I 95 I 95 1.355 0 0.035 0.078 3.007 83.690 71.429 LGA T 96 T 96 1.676 0 0.046 1.132 4.403 77.143 69.048 LGA E 97 E 97 1.430 0 0.028 0.569 2.584 81.429 73.122 LGA R 98 R 98 0.881 0 0.018 1.782 10.193 90.476 52.814 LGA F 99 F 99 0.885 0 0.013 0.185 3.759 92.857 68.485 LGA L 100 L 100 1.396 0 0.046 0.105 2.629 83.690 74.286 LGA E 101 E 101 1.630 0 0.006 0.800 2.061 77.143 77.725 LGA E 102 E 102 1.170 0 0.017 0.226 1.714 85.952 80.582 LGA A 103 A 103 0.699 0 0.021 0.019 1.151 95.238 92.476 LGA K 104 K 104 1.114 0 0.050 0.703 5.932 83.690 59.683 LGA S 105 S 105 1.882 0 0.116 0.725 4.756 72.976 64.683 LGA I 106 I 106 1.440 0 0.068 1.270 4.767 79.286 68.274 LGA G 107 G 107 0.613 0 0.472 0.472 1.739 86.071 86.071 LGA L 108 L 108 0.674 0 0.089 1.420 3.796 83.810 75.060 LGA D 109 D 109 1.385 0 0.032 1.262 4.899 81.429 68.988 LGA D 110 D 110 1.640 0 0.046 0.858 4.474 75.000 62.738 LGA Q 111 Q 111 1.847 0 0.012 0.918 4.501 75.000 63.915 LGA T 112 T 112 1.218 0 0.076 0.087 1.852 88.333 82.925 LGA A 113 A 113 0.376 0 0.098 0.103 0.848 92.857 92.381 LGA I 114 I 114 1.624 0 0.066 0.645 3.426 81.548 70.417 LGA E 115 E 115 1.415 0 0.014 0.742 2.561 81.429 74.074 LGA L 116 L 116 1.280 0 0.011 0.196 1.895 81.548 78.274 LGA L 117 L 117 1.479 0 0.025 0.452 2.736 81.548 72.262 LGA I 118 I 118 0.863 0 0.034 0.060 1.578 90.476 87.143 LGA K 119 K 119 0.942 0 0.105 0.631 2.610 85.952 76.984 LGA R 120 R 120 2.384 0 0.027 1.346 5.196 66.786 56.580 LGA S 121 S 121 2.200 0 0.052 0.714 2.477 68.810 67.460 LGA R 122 R 122 1.331 0 0.099 1.207 3.856 77.143 67.143 LGA N 123 N 123 1.935 0 0.379 0.515 5.965 51.071 43.929 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 39 156 156 100.00 313 313 100.00 39 SUMMARY(RMSD_GDC): 1.314 1.340 2.238 83.193 74.175 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 39 39 4.0 39 1.31 89.103 95.074 2.758 LGA_LOCAL RMSD: 1.314 Number of atoms: 39 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 1.314 Number of assigned atoms: 39 Std_ASGN_ATOMS RMSD: 1.314 Standard rmsd on all 39 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.700973 * X + -0.430472 * Y + 0.568622 * Z + 19.722441 Y_new = -0.713182 * X + -0.426355 * Y + 0.556411 * Z + 11.294930 Z_new = 0.002916 * X + -0.795560 * Y + -0.605868 * Z + 3.425023 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.794032 -0.002916 -2.221656 [DEG: -45.4947 -0.1671 -127.2915 ] ZXZ: 2.345341 2.221653 3.137928 [DEG: 134.3781 127.2913 179.7900 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0586TS457_1-D2 REMARK 2: T0586-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0586TS457_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 39 39 4.0 39 1.31 95.074 1.31 REMARK ---------------------------------------------------------- MOLECULE T0586TS457_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0586 REMARK MODEL 1 REMARK PARENT 3by6_A ATOM 1332 N ASP 85 2.927 20.637 15.866 1.00 0.50 N ATOM 1333 CA ASP 85 2.703 19.546 16.808 1.00 0.50 C ATOM 1334 C ASP 85 1.367 18.861 16.549 1.00 0.50 C ATOM 1335 O ASP 85 1.284 17.633 16.520 1.00 0.50 O ATOM 1336 CB ASP 85 2.754 20.065 18.248 1.00 0.50 C ATOM 1337 CG ASP 85 4.156 20.427 18.702 1.00 0.50 C ATOM 1338 OD1 ASP 85 5.135 20.063 18.017 1.00 0.50 O ATOM 1339 OD2 ASP 85 4.278 21.083 19.761 1.00 0.50 O ATOM 1344 N GLN 86 0.323 19.662 16.363 1.00 0.50 N ATOM 1345 CA GLN 86 -1.029 19.136 16.214 1.00 0.50 C ATOM 1346 C GLN 86 -1.128 18.203 15.015 1.00 0.50 C ATOM 1347 O GLN 86 -1.615 17.078 15.131 1.00 0.50 O ATOM 1348 CB GLN 86 -2.036 20.281 16.065 1.00 0.50 C ATOM 1349 CG GLN 86 -3.479 19.810 15.935 1.00 0.50 C ATOM 1350 CD GLN 86 -4.464 20.960 15.827 1.00 0.50 C ATOM 1351 OE1 GLN 86 -4.077 22.133 15.879 1.00 0.50 O ATOM 1352 NE2 GLN 86 -5.745 20.639 15.680 1.00 0.50 N ATOM 1361 N LEU 87 -0.665 18.676 13.863 1.00 0.50 N ATOM 1362 CA LEU 87 -0.699 17.884 12.640 1.00 0.50 C ATOM 1363 C LEU 87 -0.056 16.518 12.849 1.00 0.50 C ATOM 1364 O LEU 87 -0.612 15.492 12.453 1.00 0.50 O ATOM 1365 CB LEU 87 0.020 18.625 11.506 1.00 0.50 C ATOM 1366 CG LEU 87 -0.002 20.154 11.578 1.00 0.50 C ATOM 1367 CD1 LEU 87 0.691 20.746 10.357 1.00 0.50 C ATOM 1368 CD2 LEU 87 -1.438 20.654 11.668 1.00 0.50 C ATOM 1380 N LYS 88 1.118 16.512 13.470 1.00 0.50 N ATOM 1381 CA LYS 88 1.839 15.272 13.731 1.00 0.50 C ATOM 1382 C LYS 88 1.038 14.351 14.642 1.00 0.50 C ATOM 1383 O LYS 88 1.159 13.128 14.565 1.00 0.50 O ATOM 1384 CB LYS 88 3.202 15.569 14.364 1.00 0.50 C ATOM 1385 CG LYS 88 4.053 14.331 14.598 1.00 0.50 C ATOM 1386 CD LYS 88 5.431 14.696 15.134 1.00 0.50 C ATOM 1387 CE LYS 88 6.291 13.460 15.367 1.00 0.50 C ATOM 1388 NZ LYS 88 7.647 13.817 15.876 1.00 0.50 N ATOM 1402 N LYS 89 0.220 14.944 15.504 1.00 0.50 N ATOM 1403 CA LYS 89 -0.628 14.176 16.408 1.00 0.50 C ATOM 1404 C LYS 89 -1.752 13.479 15.651 1.00 0.50 C ATOM 1405 O LYS 89 -2.094 12.334 15.945 1.00 0.50 O ATOM 1406 CB LYS 89 -1.217 15.085 17.491 1.00 0.50 C ATOM 1407 CG LYS 89 -2.068 14.349 18.514 1.00 0.50 C ATOM 1408 CD LYS 89 -2.359 15.223 19.728 1.00 0.50 C ATOM 1409 CE LYS 89 -3.704 14.882 20.358 1.00 0.50 C ATOM 1410 NZ LYS 89 -3.913 15.610 21.641 1.00 0.50 N ATOM 1424 N GLU 90 -2.324 14.178 14.677 1.00 0.50 N ATOM 1425 CA GLU 90 -3.431 13.640 13.896 1.00 0.50 C ATOM 1426 C GLU 90 -2.991 12.437 13.071 1.00 0.50 C ATOM 1427 O GLU 90 -3.644 11.393 13.079 1.00 0.50 O ATOM 1428 CB GLU 90 -4.009 14.719 12.974 1.00 0.50 C ATOM 1429 CG GLU 90 -3.017 15.242 11.945 1.00 0.50 C ATOM 1430 CD GLU 90 -3.594 16.326 11.052 1.00 0.50 C ATOM 1431 OE1 GLU 90 -4.604 16.957 11.430 1.00 0.50 O ATOM 1432 OE2 GLU 90 -3.032 16.539 9.950 1.00 0.50 O ATOM 1439 N LEU 91 -1.881 12.590 12.357 1.00 0.50 N ATOM 1440 CA LEU 91 -1.320 11.500 11.567 1.00 0.50 C ATOM 1441 C LEU 91 -1.005 10.293 12.441 1.00 0.50 C ATOM 1442 O LEU 91 -1.356 9.162 12.103 1.00 0.50 O ATOM 1443 CB LEU 91 -0.048 11.965 10.849 1.00 0.50 C ATOM 1444 CG LEU 91 -0.242 12.966 9.707 1.00 0.50 C ATOM 1445 CD1 LEU 91 1.108 13.478 9.222 1.00 0.50 C ATOM 1446 CD2 LEU 91 -1.006 12.313 8.562 1.00 0.50 C ATOM 1458 N ALA 92 -0.340 10.539 13.565 1.00 0.50 N ATOM 1459 CA ALA 92 0.023 9.472 14.489 1.00 0.50 C ATOM 1460 C ALA 92 -1.213 8.790 15.059 1.00 0.50 C ATOM 1461 O ALA 92 -1.257 7.567 15.185 1.00 0.50 O ATOM 1462 CB ALA 92 0.882 10.026 15.623 1.00 0.50 C ATOM 1468 N ASP 93 -2.218 9.589 15.403 1.00 0.50 N ATOM 1469 CA ASP 93 -3.459 9.064 15.959 1.00 0.50 C ATOM 1470 C ASP 93 -4.161 8.143 14.969 1.00 0.50 C ATOM 1471 O ASP 93 -4.540 7.023 15.309 1.00 0.50 O ATOM 1472 CB ASP 93 -4.393 10.210 16.359 1.00 0.50 C ATOM 1473 CG ASP 93 -3.895 10.992 17.560 1.00 0.50 C ATOM 1474 OD1 ASP 93 -2.945 10.542 18.235 1.00 0.50 O ATOM 1475 OD2 ASP 93 -4.468 12.070 17.836 1.00 0.50 O ATOM 1480 N ALA 94 -4.333 8.624 13.742 1.00 0.50 N ATOM 1481 CA ALA 94 -5.011 7.853 12.706 1.00 0.50 C ATOM 1482 C ALA 94 -4.256 6.569 12.391 1.00 0.50 C ATOM 1483 O ALA 94 -4.861 5.524 12.152 1.00 0.50 O ATOM 1484 CB ALA 94 -5.165 8.692 11.441 1.00 0.50 C ATOM 1490 N ILE 95 -2.930 6.654 12.388 1.00 0.50 N ATOM 1491 CA ILE 95 -2.089 5.499 12.101 1.00 0.50 C ATOM 1492 C ILE 95 -2.171 4.466 13.218 1.00 0.50 C ATOM 1493 O ILE 95 -2.387 3.281 12.966 1.00 0.50 O ATOM 1494 CB ILE 95 -0.614 5.918 11.897 1.00 0.50 C ATOM 1495 CG1 ILE 95 -0.472 6.755 10.620 1.00 0.50 C ATOM 1496 CG2 ILE 95 0.295 4.689 11.842 1.00 0.50 C ATOM 1497 CD1 ILE 95 0.883 7.433 10.479 1.00 0.50 C ATOM 1509 N THR 96 -1.995 4.923 14.453 1.00 0.50 N ATOM 1510 CA THR 96 -2.024 4.036 15.610 1.00 0.50 C ATOM 1511 C THR 96 -3.381 3.359 15.751 1.00 0.50 C ATOM 1512 O THR 96 -3.463 2.149 15.963 1.00 0.50 O ATOM 1513 CB THR 96 -1.702 4.806 16.910 1.00 0.50 C ATOM 1514 OG1 THR 96 -0.378 5.345 16.812 1.00 0.50 O ATOM 1515 CG2 THR 96 -1.782 3.891 18.125 1.00 0.50 C ATOM 1523 N GLU 97 -4.445 4.147 15.633 1.00 0.50 N ATOM 1524 CA GLU 97 -5.802 3.624 15.748 1.00 0.50 C ATOM 1525 C GLU 97 -6.052 2.517 14.732 1.00 0.50 C ATOM 1526 O GLU 97 -6.640 1.485 15.057 1.00 0.50 O ATOM 1527 CB GLU 97 -6.825 4.747 15.557 1.00 0.50 C ATOM 1528 CG GLU 97 -8.271 4.293 15.708 1.00 0.50 C ATOM 1529 CD GLU 97 -9.275 5.421 15.550 1.00 0.50 C ATOM 1530 OE1 GLU 97 -8.863 6.581 15.332 1.00 0.50 O ATOM 1531 OE2 GLU 97 -10.494 5.141 15.654 1.00 0.50 O ATOM 1538 N ARG 98 -5.606 2.737 13.500 1.00 0.50 N ATOM 1539 CA ARG 98 -5.782 1.758 12.435 1.00 0.50 C ATOM 1540 C ARG 98 -5.082 0.448 12.770 1.00 0.50 C ATOM 1541 O ARG 98 -5.597 -0.633 12.481 1.00 0.50 O ATOM 1542 CB ARG 98 -5.246 2.307 11.109 1.00 0.50 C ATOM 1543 CG ARG 98 -5.384 1.336 9.946 1.00 0.50 C ATOM 1544 CD ARG 98 -6.844 1.017 9.656 1.00 0.50 C ATOM 1545 NE ARG 98 -6.983 0.122 8.510 1.00 0.50 N ATOM 1546 CZ ARG 98 -8.110 -0.491 8.154 1.00 0.50 C ATOM 1547 NH1 ARG 98 -9.270 -0.177 8.727 1.00 0.50 H ATOM 1548 NH2 ARG 98 -8.076 -1.438 7.220 1.00 0.50 H ATOM 1562 N PHE 99 -3.906 0.549 13.379 1.00 0.50 N ATOM 1563 CA PHE 99 -3.133 -0.629 13.753 1.00 0.50 C ATOM 1564 C PHE 99 -3.912 -1.516 14.716 1.00 0.50 C ATOM 1565 O PHE 99 -4.030 -2.722 14.506 1.00 0.50 O ATOM 1566 CB PHE 99 -1.800 -0.216 14.391 1.00 0.50 C ATOM 1567 CG PHE 99 -0.863 -1.373 14.640 1.00 0.50 C ATOM 1568 CD1 PHE 99 -0.388 -2.140 13.583 1.00 0.50 C ATOM 1569 CD2 PHE 99 -0.463 -1.689 15.934 1.00 0.50 C ATOM 1570 CE1 PHE 99 0.475 -3.209 13.811 1.00 0.50 C ATOM 1571 CE2 PHE 99 0.400 -2.756 16.171 1.00 0.50 C ATOM 1572 CZ PHE 99 0.868 -3.516 15.107 1.00 0.50 C ATOM 1582 N LEU 100 -4.441 -0.909 15.774 1.00 0.50 N ATOM 1583 CA LEU 100 -5.210 -1.643 16.771 1.00 0.50 C ATOM 1584 C LEU 100 -6.454 -2.271 16.156 1.00 0.50 C ATOM 1585 O LEU 100 -6.779 -3.426 16.430 1.00 0.50 O ATOM 1586 CB LEU 100 -5.615 -0.712 17.920 1.00 0.50 C ATOM 1587 CG LEU 100 -4.484 -0.227 18.830 1.00 0.50 C ATOM 1588 CD1 LEU 100 -5.004 0.829 19.796 1.00 0.50 C ATOM 1589 CD2 LEU 100 -3.890 -1.402 19.596 1.00 0.50 C ATOM 1601 N GLU 101 -7.148 -1.503 15.322 1.00 0.50 N ATOM 1602 CA GLU 101 -8.358 -1.983 14.666 1.00 0.50 C ATOM 1603 C GLU 101 -8.048 -3.120 13.701 1.00 0.50 C ATOM 1604 O GLU 101 -8.772 -4.113 13.644 1.00 0.50 O ATOM 1605 CB GLU 101 -9.050 -0.840 13.918 1.00 0.50 C ATOM 1606 CG GLU 101 -9.998 -1.308 12.823 1.00 0.50 C ATOM 1607 CD GLU 101 -11.202 -0.401 12.642 1.00 0.50 C ATOM 1608 OE1 GLU 101 -11.687 -0.247 11.500 1.00 0.50 O ATOM 1609 OE2 GLU 101 -11.661 0.174 13.658 1.00 0.50 O ATOM 1616 N GLU 102 -6.968 -2.967 12.942 1.00 0.50 N ATOM 1617 CA GLU 102 -6.560 -3.981 11.977 1.00 0.50 C ATOM 1618 C GLU 102 -6.338 -5.327 12.654 1.00 0.50 C ATOM 1619 O GLU 102 -6.717 -6.371 12.121 1.00 0.50 O ATOM 1620 CB GLU 102 -5.282 -3.547 11.253 1.00 0.50 C ATOM 1621 CG GLU 102 -4.962 -4.380 10.019 1.00 0.50 C ATOM 1622 CD GLU 102 -3.719 -3.913 9.285 1.00 0.50 C ATOM 1623 OE1 GLU 102 -3.280 -2.762 9.496 1.00 0.50 O ATOM 1624 OE2 GLU 102 -3.181 -4.708 8.477 1.00 0.50 O ATOM 1631 N ALA 103 -5.720 -5.298 13.830 1.00 0.50 N ATOM 1632 CA ALA 103 -5.441 -6.517 14.579 1.00 0.50 C ATOM 1633 C ALA 103 -6.727 -7.254 14.929 1.00 0.50 C ATOM 1634 O ALA 103 -6.864 -8.448 14.659 1.00 0.50 O ATOM 1635 CB ALA 103 -4.664 -6.189 15.850 1.00 0.50 C ATOM 1641 N LYS 104 -7.667 -6.538 15.535 1.00 0.50 N ATOM 1642 CA LYS 104 -8.949 -7.120 15.915 1.00 0.50 C ATOM 1643 C LYS 104 -9.585 -7.863 14.747 1.00 0.50 C ATOM 1644 O LYS 104 -10.036 -8.999 14.892 1.00 0.50 O ATOM 1645 CB LYS 104 -9.902 -6.033 16.420 1.00 0.50 C ATOM 1646 CG LYS 104 -9.505 -5.446 17.765 1.00 0.50 C ATOM 1647 CD LYS 104 -10.487 -4.370 18.213 1.00 0.50 C ATOM 1648 CE LYS 104 -10.081 -3.759 19.549 1.00 0.50 C ATOM 1649 NZ LYS 104 -11.021 -2.681 19.972 1.00 0.50 N ATOM 1663 N SER 105 -9.620 -7.212 13.589 1.00 0.50 N ATOM 1664 CA SER 105 -10.193 -7.812 12.390 1.00 0.50 C ATOM 1665 C SER 105 -9.488 -9.116 12.036 1.00 0.50 C ATOM 1666 O SER 105 -10.131 -10.101 11.671 1.00 0.50 O ATOM 1667 CB SER 105 -10.105 -6.839 11.211 1.00 0.50 C ATOM 1668 OG SER 105 -10.935 -5.711 11.437 1.00 0.50 O ATOM 1674 N ILE 106 -8.164 -9.114 12.145 1.00 0.50 N ATOM 1675 CA ILE 106 -7.371 -10.303 11.855 1.00 0.50 C ATOM 1676 C ILE 106 -7.427 -11.297 13.008 1.00 0.50 C ATOM 1677 O ILE 106 -6.830 -12.372 12.944 1.00 0.50 O ATOM 1678 CB ILE 106 -5.897 -9.934 11.564 1.00 0.50 C ATOM 1679 CG1 ILE 106 -5.799 -9.112 10.275 1.00 0.50 C ATOM 1680 CG2 ILE 106 -5.033 -11.193 11.471 1.00 0.50 C ATOM 1681 CD1 ILE 106 -4.428 -8.497 10.042 1.00 0.50 C ATOM 1693 N GLY 107 -8.146 -10.931 14.064 1.00 0.50 N ATOM 1694 CA GLY 107 -8.281 -11.790 15.234 1.00 0.50 C ATOM 1695 C GLY 107 -7.719 -11.116 16.480 1.00 0.50 C ATOM 1696 O GLY 107 -8.468 -10.635 17.329 1.00 0.50 O ATOM 1700 N LEU 108 -6.394 -11.087 16.583 1.00 0.50 N ATOM 1701 CA LEU 108 -5.729 -10.472 17.725 1.00 0.50 C ATOM 1702 C LEU 108 -6.739 -9.873 18.695 1.00 0.50 C ATOM 1703 O LEU 108 -7.671 -9.180 18.286 1.00 0.50 O ATOM 1704 CB LEU 108 -4.759 -9.385 17.252 1.00 0.50 C ATOM 1705 CG LEU 108 -3.583 -9.853 16.392 1.00 0.50 C ATOM 1706 CD1 LEU 108 -2.788 -8.655 15.890 1.00 0.50 C ATOM 1707 CD2 LEU 108 -2.687 -10.788 17.192 1.00 0.50 C ATOM 1719 N ASP 109 -6.551 -10.145 19.982 1.00 0.50 N ATOM 1720 CA ASP 109 -7.446 -9.632 21.012 1.00 0.50 C ATOM 1721 C ASP 109 -6.869 -8.387 21.673 1.00 0.50 C ATOM 1722 O ASP 109 -5.652 -8.213 21.736 1.00 0.50 O ATOM 1723 CB ASP 109 -7.715 -10.709 22.068 1.00 0.50 C ATOM 1724 CG ASP 109 -8.560 -11.856 21.547 1.00 0.50 C ATOM 1725 OD1 ASP 109 -9.171 -11.726 20.466 1.00 0.50 O ATOM 1726 OD2 ASP 109 -8.617 -12.901 22.234 1.00 0.50 O ATOM 1731 N ASP 110 -7.750 -7.522 22.163 1.00 0.50 N ATOM 1732 CA ASP 110 -7.331 -6.290 22.820 1.00 0.50 C ATOM 1733 C ASP 110 -6.175 -6.544 23.780 1.00 0.50 C ATOM 1734 O ASP 110 -5.150 -5.866 23.726 1.00 0.50 O ATOM 1735 CB ASP 110 -8.507 -5.658 23.572 1.00 0.50 C ATOM 1736 CG ASP 110 -8.169 -4.312 24.183 1.00 0.50 C ATOM 1737 OD1 ASP 110 -7.850 -3.362 23.437 1.00 0.50 O ATOM 1738 OD2 ASP 110 -8.221 -4.204 25.430 1.00 0.50 O ATOM 1743 N GLN 111 -6.350 -7.523 24.661 1.00 0.50 N ATOM 1744 CA GLN 111 -5.321 -7.869 25.636 1.00 0.50 C ATOM 1745 C GLN 111 -4.004 -8.209 24.950 1.00 0.50 C ATOM 1746 O GLN 111 -2.950 -7.693 25.321 1.00 0.50 O ATOM 1747 CB GLN 111 -5.776 -9.048 26.500 1.00 0.50 C ATOM 1748 CG GLN 111 -6.895 -8.695 27.473 1.00 0.50 C ATOM 1749 CD GLN 111 -7.422 -9.904 28.224 1.00 0.50 C ATOM 1750 OE1 GLN 111 -7.008 -11.040 27.968 1.00 0.50 O ATOM 1751 NE2 GLN 111 -8.342 -9.675 29.156 1.00 0.50 N ATOM 1760 N THR 112 -4.071 -9.081 23.950 1.00 0.50 N ATOM 1761 CA THR 112 -2.884 -9.492 23.211 1.00 0.50 C ATOM 1762 C THR 112 -2.190 -8.295 22.575 1.00 0.50 C ATOM 1763 O THR 112 -1.017 -8.031 22.841 1.00 0.50 O ATOM 1764 CB THR 112 -3.240 -10.518 22.112 1.00 0.50 C ATOM 1765 OG1 THR 112 -3.801 -11.681 22.730 1.00 0.50 O ATOM 1766 CG2 THR 112 -2.005 -10.919 21.314 1.00 0.50 C ATOM 1774 N ALA 113 -2.920 -7.573 21.731 1.00 0.50 N ATOM 1775 CA ALA 113 -2.414 -6.339 21.142 1.00 0.50 C ATOM 1776 C ALA 113 -1.788 -5.440 22.200 1.00 0.50 C ATOM 1777 O ALA 113 -0.908 -4.633 21.901 1.00 0.50 O ATOM 1778 CB ALA 113 -3.538 -5.596 20.427 1.00 0.50 C ATOM 1784 N ILE 114 -2.247 -5.583 23.439 1.00 0.50 N ATOM 1785 CA ILE 114 -1.690 -4.829 24.555 1.00 0.50 C ATOM 1786 C ILE 114 -0.242 -5.218 24.816 1.00 0.50 C ATOM 1787 O ILE 114 0.649 -4.369 24.816 1.00 0.50 O ATOM 1788 CB ILE 114 -2.520 -5.044 25.843 1.00 0.50 C ATOM 1789 CG1 ILE 114 -3.960 -4.564 25.634 1.00 0.50 C ATOM 1790 CG2 ILE 114 -1.875 -4.320 27.027 1.00 0.50 C ATOM 1791 CD1 ILE 114 -4.073 -3.081 25.312 1.00 0.50 C ATOM 1803 N GLU 115 -0.012 -6.509 25.037 1.00 0.50 N ATOM 1804 CA GLU 115 1.311 -6.999 25.406 1.00 0.50 C ATOM 1805 C GLU 115 2.341 -6.664 24.335 1.00 0.50 C ATOM 1806 O GLU 115 3.477 -6.307 24.644 1.00 0.50 O ATOM 1807 CB GLU 115 1.275 -8.513 25.638 1.00 0.50 C ATOM 1808 CG GLU 115 0.528 -8.923 26.900 1.00 0.50 C ATOM 1809 CD GLU 115 0.392 -10.428 27.055 1.00 0.50 C ATOM 1810 OE1 GLU 115 0.812 -11.177 26.147 1.00 0.50 O ATOM 1811 OE2 GLU 115 -0.151 -10.864 28.099 1.00 0.50 O ATOM 1818 N LEU 116 1.936 -6.785 23.075 1.00 0.50 N ATOM 1819 CA LEU 116 2.796 -6.418 21.957 1.00 0.50 C ATOM 1820 C LEU 116 3.132 -4.932 21.984 1.00 0.50 C ATOM 1821 O LEU 116 4.271 -4.539 21.733 1.00 0.50 O ATOM 1822 CB LEU 116 2.119 -6.770 20.628 1.00 0.50 C ATOM 1823 CG LEU 116 2.118 -8.251 20.239 1.00 0.50 C ATOM 1824 CD1 LEU 116 1.285 -8.463 18.982 1.00 0.50 C ATOM 1825 CD2 LEU 116 3.545 -8.736 20.020 1.00 0.50 C ATOM 1837 N LEU 117 2.134 -4.111 22.288 1.00 0.50 N ATOM 1838 CA LEU 117 2.325 -2.667 22.368 1.00 0.50 C ATOM 1839 C LEU 117 3.253 -2.298 23.518 1.00 0.50 C ATOM 1840 O LEU 117 4.223 -1.563 23.334 1.00 0.50 O ATOM 1841 CB LEU 117 0.975 -1.962 22.544 1.00 0.50 C ATOM 1842 CG LEU 117 0.592 -0.954 21.458 1.00 0.50 C ATOM 1843 CD1 LEU 117 1.000 -1.478 20.088 1.00 0.50 C ATOM 1844 CD2 LEU 117 -0.906 -0.683 21.500 1.00 0.50 C ATOM 1856 N ILE 118 2.947 -2.810 24.706 1.00 0.50 N ATOM 1857 CA ILE 118 3.779 -2.573 25.879 1.00 0.50 C ATOM 1858 C ILE 118 5.174 -3.156 25.691 1.00 0.50 C ATOM 1859 O ILE 118 6.176 -2.480 25.920 1.00 0.50 O ATOM 1860 CB ILE 118 3.137 -3.175 27.151 1.00 0.50 C ATOM 1861 CG1 ILE 118 1.848 -2.423 27.502 1.00 0.50 C ATOM 1862 CG2 ILE 118 4.120 -3.141 28.321 1.00 0.50 C ATOM 1863 CD1 ILE 118 1.011 -3.107 28.572 1.00 0.50 C ATOM 1875 N LYS 119 5.232 -4.417 25.276 1.00 0.50 N ATOM 1876 CA LYS 119 6.504 -5.095 25.057 1.00 0.50 C ATOM 1877 C LYS 119 7.399 -4.296 24.119 1.00 0.50 C ATOM 1878 O LYS 119 8.623 -4.426 24.152 1.00 0.50 O ATOM 1879 CB LYS 119 6.273 -6.496 24.487 1.00 0.50 C ATOM 1880 CG LYS 119 7.552 -7.290 24.271 1.00 0.50 C ATOM 1881 CD LYS 119 7.255 -8.703 23.784 1.00 0.50 C ATOM 1882 CE LYS 119 8.532 -9.510 23.585 1.00 0.50 C ATOM 1883 NZ LYS 119 8.241 -10.894 23.110 1.00 0.50 N ATOM 1897 N ARG 120 6.782 -3.470 23.281 1.00 0.50 N ATOM 1898 CA ARG 120 7.522 -2.649 22.330 1.00 0.50 C ATOM 1899 C ARG 120 8.226 -1.495 23.032 1.00 0.50 C ATOM 1900 O ARG 120 9.410 -1.246 22.804 1.00 0.50 O ATOM 1901 CB ARG 120 6.585 -2.106 21.248 1.00 0.50 C ATOM 1902 CG ARG 120 5.622 -3.147 20.694 1.00 0.50 C ATOM 1903 CD ARG 120 6.340 -4.444 20.348 1.00 0.50 C ATOM 1904 NE ARG 120 7.364 -4.236 19.328 1.00 0.50 N ATOM 1905 CZ ARG 120 7.126 -4.101 18.025 1.00 0.50 C ATOM 1906 NH1 ARG 120 5.885 -3.956 17.570 1.00 0.50 H ATOM 1907 NH2 ARG 120 8.143 -4.123 17.167 1.00 0.50 H ATOM 1921 N SER 121 7.490 -0.790 23.885 1.00 0.50 N ATOM 1922 CA SER 121 8.043 0.341 24.620 1.00 0.50 C ATOM 1923 C SER 121 9.194 -0.096 25.517 1.00 0.50 C ATOM 1924 O SER 121 10.236 0.558 25.568 1.00 0.50 O ATOM 1925 CB SER 121 6.955 1.012 25.462 1.00 0.50 C ATOM 1926 OG SER 121 5.978 1.611 24.627 1.00 0.50 O ATOM 1932 N ARG 122 8.998 -1.202 26.226 1.00 0.50 N ATOM 1933 CA ARG 122 10.021 -1.728 27.124 1.00 0.50 C ATOM 1934 C ARG 122 11.203 -2.286 26.344 1.00 0.50 C ATOM 1935 O ARG 122 12.307 -2.408 26.874 1.00 0.50 O ATOM 1936 CB ARG 122 9.434 -2.817 28.025 1.00 0.50 C ATOM 1937 CG ARG 122 9.941 -2.763 29.459 1.00 0.50 C ATOM 1938 CD ARG 122 9.630 -4.049 30.211 1.00 0.50 C ATOM 1939 NE ARG 122 8.204 -4.177 30.496 1.00 0.50 N ATOM 1940 CZ ARG 122 7.285 -4.586 29.624 1.00 0.50 C ATOM 1941 NH1 ARG 122 7.640 -5.097 28.447 1.00 0.50 H ATOM 1942 NH2 ARG 122 5.995 -4.469 29.926 1.00 0.50 H ATOM 1956 N ASN 123 10.966 -2.627 25.081 1.00 0.50 N ATOM 1957 CA ASN 123 12.013 -3.174 24.226 1.00 0.50 C ATOM 1958 C ASN 123 12.929 -2.075 23.705 1.00 0.50 C ATOM 1959 O ASN 123 14.079 -2.329 23.348 1.00 0.50 O ATOM 1960 CB ASN 123 11.396 -3.949 23.056 1.00 0.50 C ATOM 1961 CG ASN 123 10.480 -5.066 23.518 1.00 0.50 C ATOM 1962 OD1 ASN 123 10.649 -5.610 24.613 1.00 0.50 O ATOM 1963 ND2 ASN 123 9.502 -5.417 22.692 1.00 0.50 N TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 313 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 25.16 94.7 76 100.0 76 ARMSMC SECONDARY STRUCTURE . . 8.43 100.0 64 100.0 64 ARMSMC SURFACE . . . . . . . . 25.69 94.4 72 100.0 72 ARMSMC BURIED . . . . . . . . 12.19 100.0 4 100.0 4 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 81.54 52.9 34 100.0 34 ARMSSC1 RELIABLE SIDE CHAINS . 81.54 52.9 34 100.0 34 ARMSSC1 SECONDARY STRUCTURE . . 78.71 57.1 28 100.0 28 ARMSSC1 SURFACE . . . . . . . . 81.54 52.9 34 100.0 34 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 67.67 63.3 30 100.0 30 ARMSSC2 RELIABLE SIDE CHAINS . 68.88 65.2 23 100.0 23 ARMSSC2 SECONDARY STRUCTURE . . 69.99 66.7 24 100.0 24 ARMSSC2 SURFACE . . . . . . . . 67.67 63.3 30 100.0 30 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 76.19 50.0 14 100.0 14 ARMSSC3 RELIABLE SIDE CHAINS . 72.84 50.0 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 72.94 53.8 13 100.0 13 ARMSSC3 SURFACE . . . . . . . . 76.19 50.0 14 100.0 14 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 94.50 42.9 7 100.0 7 ARMSSC4 RELIABLE SIDE CHAINS . 94.50 42.9 7 100.0 7 ARMSSC4 SECONDARY STRUCTURE . . 93.64 50.0 6 100.0 6 ARMSSC4 SURFACE . . . . . . . . 94.50 42.9 7 100.0 7 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 1.31 (Number of atoms: 39) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 1.31 39 100.0 39 CRMSCA CRN = ALL/NP . . . . . 0.0337 CRMSCA SECONDARY STRUCTURE . . 1.32 32 100.0 32 CRMSCA SURFACE . . . . . . . . 1.34 37 100.0 37 CRMSCA BURIED . . . . . . . . 0.56 2 100.0 2 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 1.42 194 100.0 194 CRMSMC SECONDARY STRUCTURE . . 1.32 160 100.0 160 CRMSMC SURFACE . . . . . . . . 1.45 184 100.0 184 CRMSMC BURIED . . . . . . . . 0.67 10 100.0 10 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 2.92 157 100.0 157 CRMSSC RELIABLE SIDE CHAINS . 2.86 139 100.0 139 CRMSSC SECONDARY STRUCTURE . . 2.89 130 100.0 130 CRMSSC SURFACE . . . . . . . . 2.94 155 100.0 155 CRMSSC BURIED . . . . . . . . 0.90 2 100.0 2 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 2.28 313 100.0 313 CRMSALL SECONDARY STRUCTURE . . 2.22 258 100.0 258 CRMSALL SURFACE . . . . . . . . 2.31 303 100.0 303 CRMSALL BURIED . . . . . . . . 0.67 10 100.0 10 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.740 0.387 0.195 39 100.0 39 ERRCA SECONDARY STRUCTURE . . 0.745 0.389 0.196 32 100.0 32 ERRCA SURFACE . . . . . . . . 0.772 0.399 0.200 37 100.0 37 ERRCA BURIED . . . . . . . . 0.162 0.154 0.091 2 100.0 2 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.784 0.390 0.202 194 100.0 194 ERRMC SECONDARY STRUCTURE . . 0.735 0.382 0.199 160 100.0 160 ERRMC SURFACE . . . . . . . . 0.816 0.403 0.209 184 100.0 184 ERRMC BURIED . . . . . . . . 0.189 0.149 0.079 10 100.0 10 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.013 0.603 0.302 157 100.0 157 ERRSC RELIABLE SIDE CHAINS . 1.944 0.594 0.298 139 100.0 139 ERRSC SECONDARY STRUCTURE . . 1.965 0.598 0.299 130 100.0 130 ERRSC SURFACE . . . . . . . . 2.035 0.608 0.304 155 100.0 155 ERRSC BURIED . . . . . . . . 0.345 0.216 0.108 2 100.0 2 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.362 0.486 0.247 313 100.0 313 ERRALL SECONDARY STRUCTURE . . 1.309 0.478 0.244 258 100.0 258 ERRALL SURFACE . . . . . . . . 1.401 0.497 0.253 303 100.0 303 ERRALL BURIED . . . . . . . . 0.189 0.149 0.079 10 100.0 10 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 13 37 39 39 39 39 39 DISTCA CA (P) 33.33 94.87 100.00 100.00 100.00 39 DISTCA CA (RMS) 0.72 1.24 1.31 1.31 1.31 DISTCA ALL (N) 73 217 273 304 312 313 313 DISTALL ALL (P) 23.32 69.33 87.22 97.12 99.68 313 DISTALL ALL (RMS) 0.73 1.28 1.59 1.96 2.20 DISTALL END of the results output