####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 39 ( 313), selected 39 , name T0586TS423_1-D2 # Molecule2: number of CA atoms 39 ( 313), selected 39 , name T0586-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0586TS423_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 39 85 - 123 4.16 4.16 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 30 85 - 114 1.95 5.34 LCS_AVERAGE: 71.73 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 93 - 109 0.96 4.90 LONGEST_CONTINUOUS_SEGMENT: 17 107 - 123 0.93 8.51 LCS_AVERAGE: 41.49 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 39 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT D 85 D 85 13 30 39 9 11 13 22 25 27 29 30 30 32 32 34 36 37 38 39 39 39 39 39 LCS_GDT Q 86 Q 86 13 30 39 9 11 19 25 26 27 29 30 30 32 32 34 36 37 38 39 39 39 39 39 LCS_GDT L 87 L 87 13 30 39 9 11 18 25 26 27 29 30 30 32 32 34 36 37 38 39 39 39 39 39 LCS_GDT K 88 K 88 13 30 39 9 11 17 25 26 27 29 30 30 32 32 34 36 37 38 39 39 39 39 39 LCS_GDT K 89 K 89 13 30 39 9 11 18 25 26 27 29 30 30 32 32 34 36 37 38 39 39 39 39 39 LCS_GDT E 90 E 90 13 30 39 9 11 19 25 26 27 29 30 30 32 32 34 36 37 38 39 39 39 39 39 LCS_GDT L 91 L 91 13 30 39 9 11 17 25 26 27 29 30 30 32 32 34 36 37 38 39 39 39 39 39 LCS_GDT A 92 A 92 13 30 39 9 11 18 25 26 27 29 30 30 32 32 34 36 37 38 39 39 39 39 39 LCS_GDT D 93 D 93 17 30 39 9 11 19 25 26 27 29 30 30 32 32 34 36 37 38 39 39 39 39 39 LCS_GDT A 94 A 94 17 30 39 6 11 19 25 26 27 29 30 30 32 32 34 36 37 38 39 39 39 39 39 LCS_GDT I 95 I 95 17 30 39 5 12 19 25 26 27 29 30 30 32 32 34 36 37 38 39 39 39 39 39 LCS_GDT T 96 T 96 17 30 39 6 13 19 25 26 27 29 30 30 32 32 34 36 37 38 39 39 39 39 39 LCS_GDT E 97 E 97 17 30 39 9 13 19 25 26 27 29 30 30 32 32 34 36 37 38 39 39 39 39 39 LCS_GDT R 98 R 98 17 30 39 9 13 19 25 26 27 29 30 30 32 32 34 36 37 38 39 39 39 39 39 LCS_GDT F 99 F 99 17 30 39 9 13 19 25 26 27 29 30 30 32 32 34 36 37 38 39 39 39 39 39 LCS_GDT L 100 L 100 17 30 39 9 13 19 25 26 27 29 30 30 32 32 34 36 37 38 39 39 39 39 39 LCS_GDT E 101 E 101 17 30 39 9 13 19 25 26 27 29 30 30 32 32 34 36 37 38 39 39 39 39 39 LCS_GDT E 102 E 102 17 30 39 9 13 19 25 26 27 29 30 30 32 32 34 36 37 38 39 39 39 39 39 LCS_GDT A 103 A 103 17 30 39 9 13 19 25 26 27 29 30 30 32 32 34 36 37 38 39 39 39 39 39 LCS_GDT K 104 K 104 17 30 39 9 13 19 25 26 27 29 30 30 32 32 34 36 37 38 39 39 39 39 39 LCS_GDT S 105 S 105 17 30 39 9 13 19 25 26 27 29 30 30 32 32 34 36 37 38 39 39 39 39 39 LCS_GDT I 106 I 106 17 30 39 4 13 19 25 26 27 29 30 30 32 32 34 36 37 38 39 39 39 39 39 LCS_GDT G 107 G 107 17 30 39 5 13 19 25 26 27 29 30 30 32 32 34 36 37 38 39 39 39 39 39 LCS_GDT L 108 L 108 17 30 39 6 13 19 25 26 27 29 30 30 32 32 34 36 37 38 39 39 39 39 39 LCS_GDT D 109 D 109 17 30 39 6 15 19 25 26 27 29 30 30 32 32 34 36 37 38 39 39 39 39 39 LCS_GDT D 110 D 110 17 30 39 9 15 18 25 26 27 29 30 30 32 32 34 36 37 38 39 39 39 39 39 LCS_GDT Q 111 Q 111 17 30 39 9 15 16 21 26 27 29 30 30 32 32 34 36 37 38 39 39 39 39 39 LCS_GDT T 112 T 112 17 30 39 6 15 16 17 22 26 29 30 30 32 32 34 36 37 38 39 39 39 39 39 LCS_GDT A 113 A 113 17 30 39 9 15 16 17 20 26 29 30 30 32 32 34 36 37 38 39 39 39 39 39 LCS_GDT I 114 I 114 17 30 39 6 15 16 17 18 20 25 30 30 32 32 34 36 37 38 39 39 39 39 39 LCS_GDT E 115 E 115 17 23 39 9 15 16 17 18 19 22 26 30 32 32 34 36 37 38 39 39 39 39 39 LCS_GDT L 116 L 116 17 21 39 6 15 16 17 18 19 22 24 29 32 32 34 36 37 38 39 39 39 39 39 LCS_GDT L 117 L 117 17 21 39 9 15 16 17 18 19 22 23 25 27 31 34 36 37 38 39 39 39 39 39 LCS_GDT I 118 I 118 17 21 39 9 15 16 17 18 19 22 23 25 27 31 32 36 37 38 39 39 39 39 39 LCS_GDT K 119 K 119 17 21 39 9 15 16 17 18 19 22 23 25 27 31 34 36 37 38 39 39 39 39 39 LCS_GDT R 120 R 120 17 21 39 9 15 16 17 18 19 22 23 25 27 31 34 36 37 38 39 39 39 39 39 LCS_GDT S 121 S 121 17 21 39 6 15 16 17 18 19 22 23 25 27 29 30 34 36 38 39 39 39 39 39 LCS_GDT R 122 R 122 17 21 39 9 15 16 17 18 19 22 23 25 27 29 29 33 36 38 39 39 39 39 39 LCS_GDT N 123 N 123 17 21 39 4 15 16 17 18 19 22 23 25 27 29 32 34 37 38 39 39 39 39 39 LCS_AVERAGE LCS_A: 71.07 ( 41.49 71.73 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 15 19 25 26 27 29 30 30 32 32 34 36 37 38 39 39 39 39 39 GDT PERCENT_AT 23.08 38.46 48.72 64.10 66.67 69.23 74.36 76.92 76.92 82.05 82.05 87.18 92.31 94.87 97.44 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.19 0.50 1.04 1.39 1.47 1.55 1.79 1.95 1.95 2.47 2.47 3.10 3.52 3.76 3.96 4.16 4.16 4.16 4.16 4.16 GDT RMS_ALL_AT 5.05 8.92 4.95 5.54 5.49 5.56 5.38 5.34 5.34 4.94 4.94 4.52 4.32 4.21 4.17 4.16 4.16 4.16 4.16 4.16 # Checking swapping # possible swapping detected: D 85 D 85 # possible swapping detected: F 99 F 99 # possible swapping detected: E 101 E 101 # possible swapping detected: E 102 E 102 # possible swapping detected: E 115 E 115 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA D 85 D 85 2.950 0 0.059 0.785 7.193 60.952 42.321 LGA Q 86 Q 86 1.172 0 0.064 0.166 2.791 79.286 72.275 LGA L 87 L 87 1.998 0 0.027 1.409 5.193 72.857 63.095 LGA K 88 K 88 2.220 0 0.016 0.088 5.497 68.810 53.016 LGA K 89 K 89 1.556 0 0.052 0.924 7.219 77.143 59.947 LGA E 90 E 90 1.853 0 0.065 0.148 4.577 75.000 58.466 LGA L 91 L 91 2.345 0 0.042 0.074 4.663 68.810 54.643 LGA A 92 A 92 1.767 0 0.025 0.024 2.282 75.000 72.952 LGA D 93 D 93 1.514 0 0.042 0.069 2.098 77.143 72.976 LGA A 94 A 94 1.515 0 0.070 0.072 1.864 79.286 78.000 LGA I 95 I 95 1.136 0 0.034 0.673 2.522 85.952 78.571 LGA T 96 T 96 0.443 0 0.090 1.122 2.818 97.619 87.279 LGA E 97 E 97 0.621 0 0.046 0.995 4.421 95.238 74.815 LGA R 98 R 98 1.078 0 0.050 1.271 7.023 85.952 61.558 LGA F 99 F 99 1.503 0 0.037 1.290 9.141 79.286 42.814 LGA L 100 L 100 1.277 0 0.073 1.070 1.712 83.690 80.476 LGA E 101 E 101 1.442 0 0.030 0.980 3.251 81.548 70.635 LGA E 102 E 102 1.254 0 0.045 0.919 4.159 85.952 66.349 LGA A 103 A 103 0.889 0 0.026 0.029 1.716 92.857 88.857 LGA K 104 K 104 2.058 0 0.039 0.184 5.077 70.952 53.228 LGA S 105 S 105 2.169 0 0.070 0.705 4.862 68.810 60.635 LGA I 106 I 106 0.869 0 0.065 1.285 3.730 90.595 78.214 LGA G 107 G 107 0.975 0 0.117 0.117 0.975 90.476 90.476 LGA L 108 L 108 0.782 0 0.187 1.456 3.153 88.214 78.869 LGA D 109 D 109 1.102 0 0.032 1.070 2.110 86.071 82.857 LGA D 110 D 110 1.055 0 0.022 0.868 2.438 79.762 77.440 LGA Q 111 Q 111 2.445 0 0.043 1.386 8.702 57.738 40.265 LGA T 112 T 112 3.615 0 0.099 1.059 4.330 45.238 45.442 LGA A 113 A 113 3.335 0 0.089 0.094 5.251 42.619 45.524 LGA I 114 I 114 4.611 0 0.069 0.112 6.508 27.381 35.952 LGA E 115 E 115 6.444 0 0.022 0.761 7.942 15.952 14.550 LGA L 116 L 116 6.971 0 0.039 0.884 8.636 10.119 9.583 LGA L 117 L 117 8.237 0 0.024 1.390 9.894 4.167 4.107 LGA I 118 I 118 9.627 0 0.030 0.080 11.017 0.833 1.131 LGA K 119 K 119 10.256 0 0.010 1.089 11.509 0.119 1.534 LGA R 120 R 120 10.755 0 0.042 1.034 12.270 0.000 1.429 LGA S 121 S 121 12.563 0 0.035 0.609 14.015 0.000 0.000 LGA R 122 R 122 13.741 0 0.211 1.533 17.082 0.000 0.000 LGA N 123 N 123 13.330 0 0.335 0.521 16.673 0.000 0.595 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 39 156 156 100.00 313 313 100.00 39 SUMMARY(RMSD_GDC): 4.161 4.229 4.707 59.011 51.305 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 39 39 4.0 30 1.95 69.872 71.486 1.461 LGA_LOCAL RMSD: 1.953 Number of atoms: 30 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 5.336 Number of assigned atoms: 39 Std_ASGN_ATOMS RMSD: 4.161 Standard rmsd on all 39 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.624793 * X + 0.262827 * Y + 0.735225 * Z + 8.189534 Y_new = -0.603534 * X + 0.434839 * Y + -0.668328 * Z + 16.415960 Z_new = -0.495359 * X + -0.861300 * Y + -0.113060 * Z + 41.049015 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.373501 0.518248 -1.701316 [DEG: -135.9916 29.6934 -97.4783 ] ZXZ: 0.833025 1.684098 -2.619661 [DEG: 47.7288 96.4917 -150.0955 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0586TS423_1-D2 REMARK 2: T0586-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0586TS423_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 39 39 4.0 30 1.95 71.486 4.16 REMARK ---------------------------------------------------------- MOLECULE T0586TS423_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0586 REMARK MODEL 1 REMARK PARENT N/A ATOM 668 N ASP 85 0.548 19.632 17.827 1.00 3.27 N ATOM 669 CA ASP 85 -0.430 18.771 18.435 1.00 3.27 C ATOM 670 C ASP 85 -1.166 18.057 17.345 1.00 3.27 C ATOM 671 O ASP 85 -1.402 16.850 17.411 1.00 3.27 O ATOM 672 CB ASP 85 -1.380 19.582 19.320 1.00 3.27 C ATOM 673 CG ASP 85 -2.334 18.704 20.107 1.00 3.27 C ATOM 674 OD1 ASP 85 -1.859 17.926 20.960 1.00 3.27 O ATOM 675 OD2 ASP 85 -3.557 18.795 19.869 1.00 3.27 O ATOM 676 N GLN 86 -1.547 18.813 16.302 1.00 3.24 N ATOM 677 CA GLN 86 -2.318 18.320 15.203 1.00 3.24 C ATOM 678 C GLN 86 -1.540 17.260 14.494 1.00 3.24 C ATOM 679 O GLN 86 -2.082 16.216 14.134 1.00 3.24 O ATOM 680 CB GLN 86 -2.689 19.460 14.253 1.00 3.24 C ATOM 681 CG GLN 86 -3.602 19.046 13.112 1.00 3.24 C ATOM 682 CD GLN 86 -4.967 18.594 13.592 1.00 3.24 C ATOM 683 OE1 GLN 86 -5.437 19.019 14.647 1.00 3.24 O ATOM 684 NE2 GLN 86 -5.610 17.729 12.815 1.00 3.24 N ATOM 685 N LEU 87 -0.237 17.500 14.272 1.00 3.26 N ATOM 686 CA LEU 87 0.559 16.545 13.561 1.00 3.26 C ATOM 687 C LEU 87 0.698 15.294 14.375 1.00 3.26 C ATOM 688 O LEU 87 0.600 14.192 13.843 1.00 3.26 O ATOM 689 CB LEU 87 1.932 17.134 13.230 1.00 3.26 C ATOM 690 CG LEU 87 1.953 18.271 12.207 1.00 3.26 C ATOM 691 CD1 LEU 87 3.346 18.874 12.103 1.00 3.26 C ATOM 692 CD2 LEU 87 1.486 17.779 10.846 1.00 3.26 C ATOM 693 N LYS 88 0.933 15.423 15.696 1.00 3.68 N ATOM 694 CA LYS 88 1.130 14.241 16.489 1.00 3.68 C ATOM 695 C LYS 88 -0.114 13.416 16.511 1.00 3.68 C ATOM 696 O LYS 88 -0.060 12.194 16.392 1.00 3.68 O ATOM 697 CB LYS 88 1.549 14.614 17.912 1.00 3.68 C ATOM 698 CG LYS 88 1.828 13.419 18.811 1.00 3.68 C ATOM 699 CD LYS 88 2.313 13.862 20.182 1.00 3.68 C ATOM 700 CE LYS 88 2.571 12.668 21.087 1.00 3.68 C ATOM 701 NZ LYS 88 3.046 13.086 22.435 1.00 3.68 N ATOM 702 N LYS 89 -1.278 14.068 16.663 1.00 3.90 N ATOM 703 CA LYS 89 -2.521 13.355 16.754 1.00 3.90 C ATOM 704 C LYS 89 -2.727 12.613 15.475 1.00 3.90 C ATOM 705 O LYS 89 -3.272 11.509 15.468 1.00 3.90 O ATOM 706 CB LYS 89 -3.674 14.320 17.038 1.00 3.90 C ATOM 707 CG LYS 89 -5.025 13.643 17.199 1.00 3.90 C ATOM 708 CD LYS 89 -6.108 14.650 17.551 1.00 3.90 C ATOM 709 CE LYS 89 -7.435 13.959 17.826 1.00 3.90 C ATOM 710 NZ LYS 89 -7.970 13.281 16.613 1.00 3.90 N ATOM 711 N GLU 90 -2.292 13.209 14.353 1.00 3.66 N ATOM 712 CA GLU 90 -2.475 12.604 13.069 1.00 3.66 C ATOM 713 C GLU 90 -1.766 11.290 13.067 1.00 3.66 C ATOM 714 O GLU 90 -2.309 10.290 12.599 1.00 3.66 O ATOM 715 CB GLU 90 -1.957 13.526 11.964 1.00 3.66 C ATOM 716 CG GLU 90 -2.802 14.771 11.745 1.00 3.66 C ATOM 717 CD GLU 90 -2.216 15.697 10.698 1.00 3.66 C ATOM 718 OE1 GLU 90 -1.063 15.466 10.279 1.00 3.66 O ATOM 719 OE2 GLU 90 -2.912 16.653 10.296 1.00 3.66 O ATOM 720 N LEU 91 -0.527 11.251 13.593 1.00 3.97 N ATOM 721 CA LEU 91 0.209 10.021 13.577 1.00 3.97 C ATOM 722 C LEU 91 -0.497 9.000 14.406 1.00 3.97 C ATOM 723 O LEU 91 -0.627 7.848 13.997 1.00 3.97 O ATOM 724 CB LEU 91 1.634 10.243 14.087 1.00 3.97 C ATOM 725 CG LEU 91 2.557 11.064 13.183 1.00 3.97 C ATOM 726 CD1 LEU 91 3.873 11.361 13.887 1.00 3.97 C ATOM 727 CD2 LEU 91 2.810 10.338 11.871 1.00 3.97 C ATOM 728 N ALA 92 -0.973 9.397 15.598 1.00 4.24 N ATOM 729 CA ALA 92 -1.602 8.458 16.478 1.00 4.24 C ATOM 730 C ALA 92 -2.854 7.925 15.858 1.00 4.24 C ATOM 731 O ALA 92 -3.115 6.723 15.898 1.00 4.24 O ATOM 732 CB ALA 92 -1.904 9.108 17.819 1.00 4.24 C ATOM 733 N ASP 93 -3.668 8.816 15.267 1.00 3.98 N ATOM 734 CA ASP 93 -4.926 8.400 14.728 1.00 3.98 C ATOM 735 C ASP 93 -4.709 7.448 13.604 1.00 3.98 C ATOM 736 O ASP 93 -5.409 6.444 13.492 1.00 3.98 O ATOM 737 CB ASP 93 -5.737 9.611 14.263 1.00 3.98 C ATOM 738 CG ASP 93 -6.268 10.436 15.418 1.00 3.98 C ATOM 739 OD1 ASP 93 -6.251 9.935 16.562 1.00 3.98 O ATOM 740 OD2 ASP 93 -6.702 11.583 15.179 1.00 3.98 O ATOM 741 N ALA 94 -3.734 7.716 12.721 1.00 4.20 N ATOM 742 CA ALA 94 -3.564 6.802 11.631 1.00 4.20 C ATOM 743 C ALA 94 -3.051 5.469 12.099 1.00 4.20 C ATOM 744 O ALA 94 -3.649 4.437 11.798 1.00 4.20 O ATOM 745 CB ALA 94 -2.616 7.385 10.594 1.00 4.20 C ATOM 746 N ILE 95 -1.927 5.454 12.853 1.00 4.97 N ATOM 747 CA ILE 95 -1.333 4.213 13.252 1.00 4.97 C ATOM 748 C ILE 95 -2.084 3.640 14.410 1.00 4.97 C ATOM 749 O ILE 95 -2.394 2.449 14.429 1.00 4.97 O ATOM 750 CB ILE 95 0.155 4.388 13.607 1.00 4.97 C ATOM 751 CG1 ILE 95 0.998 4.487 12.334 1.00 4.97 C ATOM 752 CG2 ILE 95 0.624 3.258 14.511 1.00 4.97 C ATOM 753 CD1 ILE 95 0.640 5.663 11.454 1.00 4.97 C ATOM 754 N THR 96 -2.398 4.474 15.414 1.00 4.64 N ATOM 755 CA THR 96 -3.021 3.959 16.593 1.00 4.64 C ATOM 756 C THR 96 -4.340 3.366 16.233 1.00 4.64 C ATOM 757 O THR 96 -4.629 2.218 16.570 1.00 4.64 O ATOM 758 CB THR 96 -3.199 5.054 17.661 1.00 4.64 C ATOM 759 OG1 THR 96 -1.914 5.550 18.058 1.00 4.64 O ATOM 760 CG2 THR 96 -3.902 4.492 18.887 1.00 4.64 C ATOM 761 N GLU 97 -5.187 4.144 15.530 1.00 4.78 N ATOM 762 CA GLU 97 -6.519 3.700 15.240 1.00 4.78 C ATOM 763 C GLU 97 -6.536 2.572 14.256 1.00 4.78 C ATOM 764 O GLU 97 -7.059 1.494 14.531 1.00 4.78 O ATOM 765 CB GLU 97 -7.366 4.857 14.707 1.00 4.78 C ATOM 766 CG GLU 97 -7.690 5.918 15.745 1.00 4.78 C ATOM 767 CD GLU 97 -8.468 7.083 15.164 1.00 4.78 C ATOM 768 OE1 GLU 97 -8.596 7.152 13.923 1.00 4.78 O ATOM 769 OE2 GLU 97 -8.950 7.926 15.949 1.00 4.78 O ATOM 770 N ARG 98 -5.953 2.804 13.067 1.00 5.52 N ATOM 771 CA ARG 98 -6.080 1.851 11.999 1.00 5.52 C ATOM 772 C ARG 98 -5.367 0.579 12.317 1.00 5.52 C ATOM 773 O ARG 98 -5.892 -0.510 12.087 1.00 5.52 O ATOM 774 CB ARG 98 -5.543 2.437 10.691 1.00 5.52 C ATOM 775 CG ARG 98 -6.403 3.548 10.110 1.00 5.52 C ATOM 776 CD ARG 98 -5.784 4.121 8.846 1.00 5.52 C ATOM 777 NE ARG 98 -6.608 5.177 8.263 1.00 5.52 N ATOM 778 CZ ARG 98 -6.239 5.929 7.231 1.00 5.52 C ATOM 779 NH1 ARG 98 -7.055 6.867 6.768 1.00 5.52 H ATOM 780 NH2 ARG 98 -5.055 5.743 6.665 1.00 5.52 H ATOM 781 N PHE 99 -4.145 0.684 12.858 1.00 5.77 N ATOM 782 CA PHE 99 -3.365 -0.489 13.131 1.00 5.77 C ATOM 783 C PHE 99 -4.089 -1.296 14.151 1.00 5.77 C ATOM 784 O PHE 99 -4.187 -2.516 14.034 1.00 5.77 O ATOM 785 CB PHE 99 -1.963 -0.101 13.606 1.00 5.77 C ATOM 786 CG PHE 99 -1.069 0.400 12.508 1.00 5.77 C ATOM 787 CD1 PHE 99 -0.652 1.719 12.482 1.00 5.77 C ATOM 788 CD2 PHE 99 -0.643 -0.449 11.502 1.00 5.77 C ATOM 789 CE1 PHE 99 0.170 2.181 11.472 1.00 5.77 C ATOM 790 CE2 PHE 99 0.181 0.012 10.492 1.00 5.77 C ATOM 791 CZ PHE 99 0.588 1.320 10.474 1.00 5.77 C ATOM 792 N LEU 100 -4.619 -0.619 15.188 1.00 5.09 N ATOM 793 CA LEU 100 -5.261 -1.287 16.283 1.00 5.09 C ATOM 794 C LEU 100 -6.449 -2.045 15.773 1.00 5.09 C ATOM 795 O LEU 100 -6.650 -3.209 16.120 1.00 5.09 O ATOM 796 CB LEU 100 -5.673 -0.279 17.358 1.00 5.09 C ATOM 797 CG LEU 100 -6.201 -0.863 18.669 1.00 5.09 C ATOM 798 CD1 LEU 100 -6.127 0.166 19.786 1.00 5.09 C ATOM 799 CD2 LEU 100 -7.630 -1.358 18.500 1.00 5.09 C ATOM 800 N GLU 101 -7.278 -1.407 14.930 1.00 5.96 N ATOM 801 CA GLU 101 -8.479 -2.041 14.472 1.00 5.96 C ATOM 802 C GLU 101 -8.108 -3.213 13.622 1.00 5.96 C ATOM 803 O GLU 101 -8.718 -4.275 13.718 1.00 5.96 O ATOM 804 CB GLU 101 -9.350 -1.047 13.701 1.00 5.96 C ATOM 805 CG GLU 101 -9.960 0.044 14.566 1.00 5.96 C ATOM 806 CD GLU 101 -10.765 1.044 13.760 1.00 5.96 C ATOM 807 OE1 GLU 101 -10.692 0.999 12.514 1.00 5.96 O ATOM 808 OE2 GLU 101 -11.469 1.872 14.374 1.00 5.96 O ATOM 809 N GLU 102 -7.088 -3.045 12.761 1.00 6.47 N ATOM 810 CA GLU 102 -6.685 -4.087 11.867 1.00 6.47 C ATOM 811 C GLU 102 -6.209 -5.247 12.679 1.00 6.47 C ATOM 812 O GLU 102 -6.528 -6.397 12.386 1.00 6.47 O ATOM 813 CB GLU 102 -5.597 -3.585 10.915 1.00 6.47 C ATOM 814 CG GLU 102 -6.090 -2.583 9.883 1.00 6.47 C ATOM 815 CD GLU 102 -4.973 -2.051 9.007 1.00 6.47 C ATOM 816 OE1 GLU 102 -3.793 -2.313 9.324 1.00 6.47 O ATOM 817 OE2 GLU 102 -5.276 -1.371 8.004 1.00 6.47 O ATOM 818 N ALA 103 -5.425 -4.957 13.733 1.00 6.34 N ATOM 819 CA ALA 103 -4.847 -5.987 14.545 1.00 6.34 C ATOM 820 C ALA 103 -5.914 -6.777 15.239 1.00 6.34 C ATOM 821 O ALA 103 -5.861 -8.004 15.258 1.00 6.34 O ATOM 822 CB ALA 103 -3.889 -5.385 15.561 1.00 6.34 C ATOM 823 N LYS 104 -6.919 -6.100 15.832 1.00 6.16 N ATOM 824 CA LYS 104 -7.943 -6.819 16.537 1.00 6.16 C ATOM 825 C LYS 104 -8.666 -7.671 15.544 1.00 6.16 C ATOM 826 O LYS 104 -9.036 -8.806 15.842 1.00 6.16 O ATOM 827 CB LYS 104 -8.886 -5.848 17.248 1.00 6.16 C ATOM 828 CG LYS 104 -9.975 -6.526 18.064 1.00 6.16 C ATOM 829 CD LYS 104 -10.826 -5.507 18.805 1.00 6.16 C ATOM 830 CE LYS 104 -11.929 -6.183 19.603 1.00 6.16 C ATOM 831 NZ LYS 104 -12.772 -5.196 20.333 1.00 6.16 N ATOM 832 N SER 105 -8.884 -7.131 14.332 1.00 7.28 N ATOM 833 CA SER 105 -9.590 -7.839 13.302 1.00 7.28 C ATOM 834 C SER 105 -8.787 -9.048 12.945 1.00 7.28 C ATOM 835 O SER 105 -9.325 -10.059 12.495 1.00 7.28 O ATOM 836 CB SER 105 -9.823 -6.933 12.092 1.00 7.28 C ATOM 837 OG SER 105 -10.695 -5.864 12.416 1.00 7.28 O ATOM 838 N ILE 106 -7.476 -8.979 13.135 1.00 7.52 N ATOM 839 CA ILE 106 -6.594 -10.106 12.860 1.00 7.52 C ATOM 840 C ILE 106 -6.667 -11.140 13.986 1.00 7.52 C ATOM 841 O ILE 106 -5.987 -12.178 13.937 1.00 7.52 O ATOM 842 CB ILE 106 -5.138 -9.646 12.660 1.00 7.52 C ATOM 843 CG1 ILE 106 -5.012 -8.814 11.381 1.00 7.52 C ATOM 844 CG2 ILE 106 -4.198 -10.842 12.652 1.00 7.52 C ATOM 845 CD1 ILE 106 -3.687 -8.098 11.246 1.00 7.52 C ATOM 846 N GLY 107 -7.485 -10.863 14.996 1.00 6.93 N ATOM 847 CA GLY 107 -7.607 -11.757 16.143 1.00 6.93 C ATOM 848 C GLY 107 -6.829 -11.315 17.376 1.00 6.93 C ATOM 849 O GLY 107 -6.907 -11.989 18.388 1.00 6.93 O ATOM 850 N LEU 108 -6.079 -10.202 17.322 1.00 6.61 N ATOM 851 CA LEU 108 -5.375 -9.732 18.534 1.00 6.61 C ATOM 852 C LEU 108 -6.390 -9.000 19.431 1.00 6.61 C ATOM 853 O LEU 108 -7.410 -8.493 18.947 1.00 6.61 O ATOM 854 CB LEU 108 -4.203 -8.826 18.154 1.00 6.61 C ATOM 855 CG LEU 108 -3.099 -9.464 17.309 1.00 6.61 C ATOM 856 CD1 LEU 108 -2.055 -8.428 16.917 1.00 6.61 C ATOM 857 CD2 LEU 108 -2.446 -10.616 18.057 1.00 6.61 C ATOM 858 N ASP 109 -6.144 -8.922 20.742 1.00 7.35 N ATOM 859 CA ASP 109 -6.990 -8.181 21.607 1.00 7.35 C ATOM 860 C ASP 109 -6.852 -6.682 21.381 1.00 7.35 C ATOM 861 O ASP 109 -5.911 -6.160 20.737 1.00 7.35 O ATOM 862 CB ASP 109 -6.687 -8.513 23.069 1.00 7.35 C ATOM 863 CG ASP 109 -7.134 -9.911 23.453 1.00 7.35 C ATOM 864 OD1 ASP 109 -7.890 -10.528 22.674 1.00 7.35 O ATOM 865 OD2 ASP 109 -6.728 -10.388 24.534 1.00 7.35 O ATOM 866 N ASP 110 -7.824 -5.945 21.927 1.00 7.46 N ATOM 867 CA ASP 110 -7.881 -4.487 21.895 1.00 7.46 C ATOM 868 C ASP 110 -6.629 -3.901 22.528 1.00 7.46 C ATOM 869 O ASP 110 -6.076 -2.919 22.033 1.00 7.46 O ATOM 870 CB ASP 110 -9.134 -3.983 22.615 1.00 7.46 C ATOM 871 CG ASP 110 -9.322 -2.485 22.478 1.00 7.46 C ATOM 872 OD1 ASP 110 -9.526 -2.015 21.339 1.00 7.46 O ATOM 873 OD2 ASP 110 -9.266 -1.782 23.508 1.00 7.46 O ATOM 874 N GLN 111 -6.179 -4.501 23.622 1.00 8.49 N ATOM 875 CA GLN 111 -4.967 -4.008 24.311 1.00 8.49 C ATOM 876 C GLN 111 -3.707 -4.188 23.448 1.00 8.49 C ATOM 877 O GLN 111 -2.984 -3.218 23.195 1.00 8.49 O ATOM 878 CB GLN 111 -4.784 -4.725 25.650 1.00 8.49 C ATOM 879 CG GLN 111 -3.619 -4.206 26.478 1.00 8.49 C ATOM 880 CD GLN 111 -3.820 -2.773 26.932 1.00 8.49 C ATOM 881 OE1 GLN 111 -4.831 -2.445 27.551 1.00 8.49 O ATOM 882 NE2 GLN 111 -2.854 -1.916 26.625 1.00 8.49 N ATOM 883 N THR 112 -3.435 -5.409 22.993 1.00 7.90 N ATOM 884 CA THR 112 -2.225 -5.607 22.183 1.00 7.90 C ATOM 885 C THR 112 -2.311 -5.107 20.764 1.00 7.90 C ATOM 886 O THR 112 -1.289 -4.774 20.174 1.00 7.90 O ATOM 887 CB THR 112 -1.829 -7.093 22.114 1.00 7.90 C ATOM 888 OG1 THR 112 -2.894 -7.847 21.521 1.00 7.90 O ATOM 889 CG2 THR 112 -1.564 -7.639 23.508 1.00 7.90 C ATOM 890 N ALA 113 -3.516 -5.048 20.208 1.00 6.48 N ATOM 891 CA ALA 113 -3.688 -4.340 18.947 1.00 6.48 C ATOM 892 C ALA 113 -3.264 -2.877 19.113 1.00 6.48 C ATOM 893 O ALA 113 -2.853 -2.261 18.165 1.00 6.48 O ATOM 894 CB ALA 113 -5.132 -4.436 18.478 1.00 6.48 C ATOM 895 N ILE 114 -3.345 -2.275 20.295 1.00 6.91 N ATOM 896 CA ILE 114 -2.935 -0.892 20.365 1.00 6.91 C ATOM 897 C ILE 114 -1.417 -0.927 20.237 1.00 6.91 C ATOM 898 O ILE 114 -0.795 -0.187 19.421 1.00 6.91 O ATOM 899 CB ILE 114 -3.420 -0.225 21.665 1.00 6.91 C ATOM 900 CG1 ILE 114 -4.946 -0.118 21.673 1.00 6.91 C ATOM 901 CG2 ILE 114 -2.756 1.131 21.848 1.00 6.91 C ATOM 902 CD1 ILE 114 -5.524 0.267 23.017 1.00 6.91 C ATOM 903 N GLU 115 -0.785 -1.782 21.033 1.00 8.03 N ATOM 904 CA GLU 115 0.676 -1.897 20.954 1.00 8.03 C ATOM 905 C GLU 115 1.089 -2.230 19.511 1.00 8.03 C ATOM 906 O GLU 115 2.087 -1.719 19.016 1.00 8.03 O ATOM 907 CB GLU 115 1.183 -2.963 21.928 1.00 8.03 C ATOM 908 CG GLU 115 1.069 -2.571 23.391 1.00 8.03 C ATOM 909 CD GLU 115 1.508 -3.680 24.327 1.00 8.03 C ATOM 910 OE1 GLU 115 1.720 -4.813 23.847 1.00 8.03 O ATOM 911 OE2 GLU 115 1.640 -3.416 25.541 1.00 8.03 O ATOM 912 N LEU 116 0.294 -3.092 18.864 1.00 7.88 N ATOM 913 CA LEU 116 0.614 -3.438 17.466 1.00 7.88 C ATOM 914 C LEU 116 0.493 -2.256 16.528 1.00 7.88 C ATOM 915 O LEU 116 1.385 -1.972 15.685 1.00 7.88 O ATOM 916 CB LEU 116 -0.293 -4.567 16.972 1.00 7.88 C ATOM 917 CG LEU 116 -0.029 -5.079 15.554 1.00 7.88 C ATOM 918 CD1 LEU 116 -0.539 -4.085 14.521 1.00 7.88 C ATOM 919 CD2 LEU 116 1.454 -5.345 15.346 1.00 7.88 C ATOM 920 N LEU 117 -0.612 -1.533 16.642 1.00 7.36 N ATOM 921 CA LEU 117 -0.820 -0.385 15.769 1.00 7.36 C ATOM 922 C LEU 117 0.271 0.648 16.030 1.00 7.36 C ATOM 923 O LEU 117 0.907 1.125 15.077 1.00 7.36 O ATOM 924 CB LEU 117 -2.210 0.212 15.992 1.00 7.36 C ATOM 925 CG LEU 117 -3.395 -0.631 15.517 1.00 7.36 C ATOM 926 CD1 LEU 117 -4.710 -0.020 15.980 1.00 7.36 C ATOM 927 CD2 LEU 117 -3.382 -0.773 14.003 1.00 7.36 C ATOM 928 N ILE 118 0.490 0.996 17.299 1.00 7.97 N ATOM 929 CA ILE 118 1.548 1.937 17.666 1.00 7.97 C ATOM 930 C ILE 118 2.944 1.446 17.320 1.00 7.97 C ATOM 931 O ILE 118 3.764 2.230 16.867 1.00 7.97 O ATOM 932 CB ILE 118 1.508 2.274 19.168 1.00 7.97 C ATOM 933 CG1 ILE 118 0.255 3.085 19.500 1.00 7.97 C ATOM 934 CG2 ILE 118 2.778 2.998 19.586 1.00 7.97 C ATOM 935 CD1 ILE 118 -0.013 3.218 20.983 1.00 7.97 C ATOM 936 N LYS 119 3.213 0.156 17.533 1.00 8.76 N ATOM 937 CA LYS 119 4.529 -0.420 17.200 1.00 8.76 C ATOM 938 C LYS 119 4.788 -0.345 15.708 1.00 8.76 C ATOM 939 O LYS 119 5.883 0.001 15.262 1.00 8.76 O ATOM 940 CB LYS 119 4.616 -1.870 17.680 1.00 8.76 C ATOM 941 CG LYS 119 4.692 -2.020 19.192 1.00 8.76 C ATOM 942 CD LYS 119 4.758 -3.483 19.598 1.00 8.76 C ATOM 943 CE LYS 119 4.818 -3.633 21.109 1.00 8.76 C ATOM 944 NZ LYS 119 4.839 -5.063 21.525 1.00 8.76 N ATOM 945 N ARG 120 3.777 -0.669 14.919 1.00 9.38 N ATOM 946 CA ARG 120 3.912 -0.601 13.477 1.00 9.38 C ATOM 947 C ARG 120 4.154 0.841 12.999 1.00 9.38 C ATOM 948 O ARG 120 5.102 1.117 12.239 1.00 9.38 O ATOM 949 CB ARG 120 2.667 -1.171 12.795 1.00 9.38 C ATOM 950 CG ARG 120 2.513 -2.677 12.941 1.00 9.38 C ATOM 951 CD ARG 120 3.639 -3.418 12.240 1.00 9.38 C ATOM 952 NE ARG 120 3.588 -3.244 10.790 1.00 9.38 N ATOM 953 CZ ARG 120 4.638 -3.368 9.984 1.00 9.38 C ATOM 954 NH1 ARG 120 4.496 -3.192 8.678 1.00 9.38 H ATOM 955 NH2 ARG 120 5.828 -3.666 10.488 1.00 9.38 H ATOM 956 N SER 121 3.302 1.769 13.441 1.00 9.17 N ATOM 957 CA SER 121 3.422 3.150 12.984 1.00 9.17 C ATOM 958 C SER 121 4.739 3.791 13.402 1.00 9.17 C ATOM 959 O SER 121 5.377 4.508 12.606 1.00 9.17 O ATOM 960 CB SER 121 2.260 3.993 13.512 1.00 9.17 C ATOM 961 OG SER 121 2.307 4.098 14.925 1.00 9.17 O ATOM 962 N ARG 122 5.134 3.528 14.645 1.00 9.87 N ATOM 963 CA ARG 122 6.404 4.035 15.182 1.00 9.87 C ATOM 964 C ARG 122 7.604 3.520 14.383 1.00 9.87 C ATOM 965 O ARG 122 8.516 4.272 14.065 1.00 9.87 O ATOM 966 CB ARG 122 6.557 3.645 16.654 1.00 9.87 C ATOM 967 CG ARG 122 7.867 4.092 17.282 1.00 9.87 C ATOM 968 CD ARG 122 7.992 5.607 17.277 1.00 9.87 C ATOM 969 NE ARG 122 7.024 6.240 18.170 1.00 9.87 N ATOM 970 CZ ARG 122 6.799 7.549 18.222 1.00 9.87 C ATOM 971 NH1 ARG 122 5.899 8.034 19.066 1.00 9.87 H ATOM 972 NH2 ARG 122 7.475 8.369 17.429 1.00 9.87 H ATOM 973 N ASN 123 7.593 2.232 14.060 1.00 11.33 N ATOM 974 CA ASN 123 8.674 1.650 13.258 1.00 11.33 C ATOM 975 C ASN 123 8.693 2.250 11.844 1.00 11.33 C ATOM 976 O ASN 123 9.767 2.408 11.238 1.00 11.33 O ATOM 977 CB ASN 123 8.536 0.127 13.198 1.00 11.33 C ATOM 978 CG ASN 123 8.908 -0.544 14.505 1.00 11.33 C ATOM 979 OD1 ASN 123 9.634 0.024 15.320 1.00 11.33 O ATOM 980 ND2 ASN 123 8.408 -1.758 14.708 1.00 11.33 N TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 313 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 18.86 96.1 76 100.0 76 ARMSMC SECONDARY STRUCTURE . . 6.94 100.0 64 100.0 64 ARMSMC SURFACE . . . . . . . . 19.24 95.8 72 100.0 72 ARMSMC BURIED . . . . . . . . 9.57 100.0 4 100.0 4 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 88.66 38.2 34 100.0 34 ARMSSC1 RELIABLE SIDE CHAINS . 88.66 38.2 34 100.0 34 ARMSSC1 SECONDARY STRUCTURE . . 83.61 42.9 28 100.0 28 ARMSSC1 SURFACE . . . . . . . . 88.66 38.2 34 100.0 34 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 68.95 53.3 30 100.0 30 ARMSSC2 RELIABLE SIDE CHAINS . 62.75 60.9 23 100.0 23 ARMSSC2 SECONDARY STRUCTURE . . 65.91 62.5 24 100.0 24 ARMSSC2 SURFACE . . . . . . . . 68.95 53.3 30 100.0 30 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 67.14 50.0 14 100.0 14 ARMSSC3 RELIABLE SIDE CHAINS . 69.37 50.0 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 62.49 53.8 13 100.0 13 ARMSSC3 SURFACE . . . . . . . . 67.14 50.0 14 100.0 14 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 72.82 42.9 7 100.0 7 ARMSSC4 RELIABLE SIDE CHAINS . 72.82 42.9 7 100.0 7 ARMSSC4 SECONDARY STRUCTURE . . 78.55 33.3 6 100.0 6 ARMSSC4 SURFACE . . . . . . . . 72.82 42.9 7 100.0 7 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 4.16 (Number of atoms: 39) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 4.16 39 100.0 39 CRMSCA CRN = ALL/NP . . . . . 0.1067 CRMSCA SECONDARY STRUCTURE . . 4.01 32 100.0 32 CRMSCA SURFACE . . . . . . . . 4.24 37 100.0 37 CRMSCA BURIED . . . . . . . . 2.34 2 100.0 2 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 4.27 194 100.0 194 CRMSMC SECONDARY STRUCTURE . . 4.07 160 100.0 160 CRMSMC SURFACE . . . . . . . . 4.34 184 100.0 184 CRMSMC BURIED . . . . . . . . 2.62 10 100.0 10 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 5.18 157 100.0 157 CRMSSC RELIABLE SIDE CHAINS . 5.08 139 100.0 139 CRMSSC SECONDARY STRUCTURE . . 4.85 130 100.0 130 CRMSSC SURFACE . . . . . . . . 5.20 155 100.0 155 CRMSSC BURIED . . . . . . . . 2.48 2 100.0 2 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 4.73 313 100.0 313 CRMSALL SECONDARY STRUCTURE . . 4.46 258 100.0 258 CRMSALL SURFACE . . . . . . . . 4.79 303 100.0 303 CRMSALL BURIED . . . . . . . . 2.62 10 100.0 10 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.973 0.313 0.349 39 100.0 39 ERRCA SECONDARY STRUCTURE . . 2.775 0.295 0.334 32 100.0 32 ERRCA SURFACE . . . . . . . . 2.913 0.305 0.337 37 100.0 37 ERRCA BURIED . . . . . . . . 4.076 0.467 0.579 2 100.0 2 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.888 0.305 0.339 194 100.0 194 ERRMC SECONDARY STRUCTURE . . 2.721 0.289 0.326 160 100.0 160 ERRMC SURFACE . . . . . . . . 2.836 0.298 0.329 184 100.0 184 ERRMC BURIED . . . . . . . . 3.839 0.432 0.539 10 100.0 10 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.076 0.302 0.309 157 100.0 157 ERRSC RELIABLE SIDE CHAINS . 3.039 0.303 0.314 139 100.0 139 ERRSC SECONDARY STRUCTURE . . 2.924 0.294 0.301 130 100.0 130 ERRSC SURFACE . . . . . . . . 3.065 0.301 0.306 155 100.0 155 ERRSC BURIED . . . . . . . . 3.932 0.442 0.564 2 100.0 2 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.963 0.302 0.323 313 100.0 313 ERRALL SECONDARY STRUCTURE . . 2.797 0.289 0.311 258 100.0 258 ERRALL SURFACE . . . . . . . . 2.934 0.298 0.316 303 100.0 303 ERRALL BURIED . . . . . . . . 3.839 0.432 0.539 10 100.0 10 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 3 21 29 39 39 39 DISTCA CA (P) 0.00 7.69 53.85 74.36 100.00 39 DISTCA CA (RMS) 0.00 1.69 2.31 2.93 4.16 DISTCA ALL (N) 1 33 126 217 309 313 313 DISTALL ALL (P) 0.32 10.54 40.26 69.33 98.72 313 DISTALL ALL (RMS) 0.39 1.64 2.24 3.06 4.57 DISTALL END of the results output