####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 39 ( 313), selected 39 , name T0586TS403_1-D2 # Molecule2: number of CA atoms 39 ( 313), selected 39 , name T0586-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0586TS403_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 39 85 - 123 2.04 2.04 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 38 85 - 122 1.89 2.05 LCS_AVERAGE: 97.30 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 85 - 107 0.97 6.90 LCS_AVERAGE: 54.50 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 39 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT D 85 D 85 23 38 39 9 17 21 27 34 37 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT Q 86 Q 86 23 38 39 9 17 21 24 34 37 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 87 L 87 23 38 39 9 14 21 24 32 37 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 88 K 88 23 38 39 9 17 21 27 34 37 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 89 K 89 23 38 39 13 18 21 27 34 37 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 90 E 90 23 38 39 9 18 21 26 34 37 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 91 L 91 23 38 39 12 18 21 27 34 37 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 92 A 92 23 38 39 13 18 21 25 34 37 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT D 93 D 93 23 38 39 13 18 21 27 34 37 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 94 A 94 23 38 39 13 18 21 27 34 37 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 95 I 95 23 38 39 13 18 21 27 34 37 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT T 96 T 96 23 38 39 13 18 21 25 34 37 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 97 E 97 23 38 39 13 18 21 27 34 37 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT R 98 R 98 23 38 39 10 18 21 27 34 37 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT F 99 F 99 23 38 39 13 18 21 27 34 37 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 100 L 100 23 38 39 13 18 21 27 34 37 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 101 E 101 23 38 39 13 18 21 27 34 37 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 102 E 102 23 38 39 13 18 21 27 34 37 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 103 A 103 23 38 39 13 18 21 27 34 37 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 104 K 104 23 38 39 12 18 21 27 34 37 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT S 105 S 105 23 38 39 13 18 21 27 34 37 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 106 I 106 23 38 39 4 18 21 27 34 37 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT G 107 G 107 23 38 39 8 17 21 27 34 37 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 108 L 108 21 38 39 8 14 20 27 34 37 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT D 109 D 109 19 38 39 8 13 20 27 34 37 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT D 110 D 110 19 38 39 8 13 20 27 34 37 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT Q 111 Q 111 19 38 39 8 13 20 27 34 37 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT T 112 T 112 19 38 39 8 13 20 27 34 37 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 113 A 113 19 38 39 8 13 20 27 34 37 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 114 I 114 19 38 39 7 13 20 27 34 37 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 115 E 115 19 38 39 8 13 20 27 34 37 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 116 L 116 19 38 39 7 13 20 27 34 37 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 117 L 117 19 38 39 6 11 17 24 34 37 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 118 I 118 19 38 39 5 12 20 27 34 37 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 119 K 119 19 38 39 5 13 20 27 34 37 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT R 120 R 120 19 38 39 5 11 17 22 24 32 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT S 121 S 121 19 38 39 4 13 18 24 32 37 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT R 122 R 122 19 38 39 4 10 20 27 34 37 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT N 123 N 123 13 36 39 3 7 14 19 22 24 31 33 39 39 39 39 39 39 39 39 39 39 39 39 LCS_AVERAGE LCS_A: 83.94 ( 54.50 97.30 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 13 18 21 27 34 37 38 38 39 39 39 39 39 39 39 39 39 39 39 39 GDT PERCENT_AT 33.33 46.15 53.85 69.23 87.18 94.87 97.44 97.44 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.33 0.49 0.82 1.33 1.63 1.80 1.89 1.89 2.04 2.04 2.04 2.04 2.04 2.04 2.04 2.04 2.04 2.04 2.04 2.04 GDT RMS_ALL_AT 6.77 6.81 6.95 2.08 2.14 2.07 2.05 2.05 2.04 2.04 2.04 2.04 2.04 2.04 2.04 2.04 2.04 2.04 2.04 2.04 # Checking swapping # possible swapping detected: D 85 D 85 # possible swapping detected: E 90 E 90 # possible swapping detected: D 109 D 109 # possible swapping detected: D 110 D 110 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA D 85 D 85 1.045 0 0.042 0.539 3.476 83.690 71.488 LGA Q 86 Q 86 2.706 0 0.046 1.033 7.260 62.976 39.418 LGA L 87 L 87 2.982 0 0.041 0.889 5.998 66.905 46.131 LGA K 88 K 88 1.996 0 0.036 1.174 4.635 72.976 56.032 LGA K 89 K 89 2.692 0 0.052 1.399 7.772 65.119 38.730 LGA E 90 E 90 2.136 0 0.044 1.231 4.238 75.119 60.529 LGA L 91 L 91 1.114 0 0.046 0.250 3.249 86.071 72.679 LGA A 92 A 92 2.680 0 0.035 0.034 3.570 61.071 57.524 LGA D 93 D 93 2.704 0 0.039 0.262 5.587 64.881 47.738 LGA A 94 A 94 0.800 0 0.041 0.038 1.327 95.238 92.476 LGA I 95 I 95 1.779 0 0.039 0.120 3.895 77.262 62.857 LGA T 96 T 96 2.653 0 0.056 1.151 5.487 60.952 53.878 LGA E 97 E 97 1.783 0 0.045 0.739 2.368 77.143 73.915 LGA R 98 R 98 0.460 0 0.062 1.885 8.590 95.238 59.394 LGA F 99 F 99 2.204 0 0.022 0.188 5.722 72.976 46.450 LGA L 100 L 100 2.159 0 0.056 0.983 5.960 70.833 57.798 LGA E 101 E 101 1.260 0 0.027 1.109 4.027 83.690 75.026 LGA E 102 E 102 1.419 0 0.030 0.421 5.544 81.548 61.111 LGA A 103 A 103 1.165 0 0.024 0.030 1.894 90.595 87.048 LGA K 104 K 104 1.356 0 0.038 0.889 7.096 83.690 54.921 LGA S 105 S 105 2.169 0 0.088 0.699 4.731 64.881 58.016 LGA I 106 I 106 1.505 0 0.247 1.364 3.619 71.071 65.417 LGA G 107 G 107 0.658 0 0.159 0.159 0.838 90.476 90.476 LGA L 108 L 108 0.843 0 0.110 0.945 4.470 85.952 74.167 LGA D 109 D 109 1.194 0 0.029 0.784 2.879 81.429 75.238 LGA D 110 D 110 1.369 0 0.041 0.736 2.971 81.429 76.250 LGA Q 111 Q 111 1.712 0 0.039 0.750 4.593 75.000 63.386 LGA T 112 T 112 0.968 0 0.029 1.115 2.625 88.214 79.456 LGA A 113 A 113 0.633 0 0.027 0.027 1.042 88.214 88.667 LGA I 114 I 114 1.591 0 0.045 1.250 4.606 79.286 63.571 LGA E 115 E 115 0.933 0 0.061 1.254 5.523 92.976 66.138 LGA L 116 L 116 1.082 0 0.046 1.023 4.174 83.929 75.060 LGA L 117 L 117 2.429 0 0.050 0.881 5.421 68.810 54.821 LGA I 118 I 118 1.199 0 0.055 0.179 3.525 85.952 73.750 LGA K 119 K 119 1.874 0 0.066 1.253 4.224 71.310 64.656 LGA R 120 R 120 3.873 0 0.054 1.175 12.011 45.238 23.766 LGA S 121 S 121 2.801 0 0.048 0.175 3.248 62.976 59.841 LGA R 122 R 122 1.654 0 0.171 1.821 12.485 60.357 32.165 LGA N 123 N 123 5.336 0 0.456 0.922 9.160 18.929 28.036 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 39 156 156 100.00 313 313 100.00 39 SUMMARY(RMSD_GDC): 2.043 2.055 3.411 74.985 62.257 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 39 39 4.0 38 1.89 78.205 88.035 1.907 LGA_LOCAL RMSD: 1.892 Number of atoms: 38 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.054 Number of assigned atoms: 39 Std_ASGN_ATOMS RMSD: 2.043 Standard rmsd on all 39 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.860190 * X + -0.419509 * Y + 0.289976 * Z + 47.631187 Y_new = -0.149388 * X + 0.750945 * Y + 0.643246 * Z + -69.782555 Z_new = -0.487603 * X + 0.509994 * Y + -0.708625 * Z + 40.765488 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.969638 0.509343 2.517770 [DEG: -170.1478 29.1832 144.2576 ] ZXZ: 2.718073 2.358343 -0.762957 [DEG: 155.7341 135.1231 -43.7142 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0586TS403_1-D2 REMARK 2: T0586-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0586TS403_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 39 39 4.0 38 1.89 88.035 2.04 REMARK ---------------------------------------------------------- MOLECULE T0586TS403_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0586 REMARK MODEL 1 REMARK PARENT 3BY6 ATOM 668 N ASP 85 0.990 21.127 15.287 1.00 0.00 N ATOM 669 CA ASP 85 1.837 20.038 15.690 1.00 0.00 C ATOM 670 CB ASP 85 2.825 20.546 16.747 1.00 0.00 C ATOM 671 CG ASP 85 4.217 19.922 16.661 1.00 0.00 C ATOM 672 OD1 ASP 85 4.502 19.235 15.694 1.00 0.00 O ATOM 673 OD2 ASP 85 5.057 20.164 17.522 1.00 0.00 O ATOM 674 C ASP 85 1.002 18.924 16.245 1.00 0.00 C ATOM 675 O ASP 85 1.237 17.751 15.953 1.00 0.00 O ATOM 676 N GLN 86 -0.010 19.267 17.062 1.00 0.00 N ATOM 677 CA GLN 86 -0.810 18.254 17.688 1.00 0.00 C ATOM 678 CB GLN 86 -1.764 18.930 18.638 1.00 0.00 C ATOM 679 CG GLN 86 -0.891 19.353 19.804 1.00 0.00 C ATOM 680 CD GLN 86 -1.465 18.693 21.024 1.00 0.00 C ATOM 681 OE1 GLN 86 -1.198 17.544 21.385 1.00 0.00 O ATOM 682 NE2 GLN 86 -2.320 19.537 21.617 1.00 0.00 N ATOM 683 C GLN 86 -1.541 17.496 16.627 1.00 0.00 C ATOM 684 O GLN 86 -1.686 16.277 16.710 1.00 0.00 O ATOM 685 N LEU 87 -2.011 18.206 15.586 1.00 0.00 N ATOM 686 CA LEU 87 -2.744 17.581 14.527 1.00 0.00 C ATOM 687 CB LEU 87 -3.273 18.663 13.570 1.00 0.00 C ATOM 688 CG LEU 87 -4.201 18.225 12.425 1.00 0.00 C ATOM 689 CD1 LEU 87 -5.176 19.338 12.049 1.00 0.00 C ATOM 690 CD2 LEU 87 -3.445 17.740 11.185 1.00 0.00 C ATOM 691 C LEU 87 -1.822 16.601 13.864 1.00 0.00 C ATOM 692 O LEU 87 -2.244 15.509 13.494 1.00 0.00 O ATOM 693 N LYS 88 -0.536 16.968 13.698 1.00 0.00 N ATOM 694 CA LYS 88 0.414 16.117 13.030 1.00 0.00 C ATOM 695 CB LYS 88 1.890 16.554 12.958 1.00 0.00 C ATOM 696 CG LYS 88 2.921 15.624 12.215 1.00 0.00 C ATOM 697 CD LYS 88 3.425 14.241 12.740 1.00 0.00 C ATOM 698 CE LYS 88 4.104 14.156 14.118 1.00 0.00 C ATOM 699 NZ LYS 88 4.379 12.756 14.514 1.00 0.00 N ATOM 700 C LYS 88 0.533 14.838 13.790 1.00 0.00 C ATOM 701 O LYS 88 0.501 13.751 13.214 1.00 0.00 O ATOM 702 N LYS 89 0.645 14.940 15.124 1.00 0.00 N ATOM 703 CA LYS 89 0.797 13.774 15.939 1.00 0.00 C ATOM 704 CB LYS 89 0.936 14.097 17.466 1.00 0.00 C ATOM 705 CG LYS 89 2.284 13.900 18.201 1.00 0.00 C ATOM 706 CD LYS 89 2.568 12.488 18.761 1.00 0.00 C ATOM 707 CE LYS 89 1.665 12.119 19.980 1.00 0.00 C ATOM 708 NZ LYS 89 0.685 11.098 19.520 1.00 0.00 N ATOM 709 C LYS 89 -0.426 12.936 15.763 1.00 0.00 C ATOM 710 O LYS 89 -0.358 11.708 15.753 1.00 0.00 O ATOM 711 N GLU 90 -1.586 13.598 15.618 1.00 0.00 N ATOM 712 CA GLU 90 -2.836 12.911 15.485 1.00 0.00 C ATOM 713 CB GLU 90 -3.992 13.950 15.592 1.00 0.00 C ATOM 714 CG GLU 90 -5.349 13.677 14.894 1.00 0.00 C ATOM 715 CD GLU 90 -5.174 13.760 13.381 1.00 0.00 C ATOM 716 OE1 GLU 90 -5.122 14.855 12.817 1.00 0.00 O ATOM 717 OE2 GLU 90 -5.092 12.715 12.753 1.00 0.00 O ATOM 718 C GLU 90 -2.790 12.082 14.242 1.00 0.00 C ATOM 719 O GLU 90 -3.307 10.968 14.216 1.00 0.00 O ATOM 720 N LEU 91 -2.161 12.598 13.169 1.00 0.00 N ATOM 721 CA LEU 91 -2.123 11.854 11.946 1.00 0.00 C ATOM 722 CB LEU 91 -1.327 12.622 10.891 1.00 0.00 C ATOM 723 CG LEU 91 -2.049 13.823 10.295 1.00 0.00 C ATOM 724 CD1 LEU 91 -1.080 14.904 9.820 1.00 0.00 C ATOM 725 CD2 LEU 91 -2.966 13.384 9.158 1.00 0.00 C ATOM 726 C LEU 91 -1.392 10.583 12.219 1.00 0.00 C ATOM 727 O LEU 91 -1.793 9.512 11.763 1.00 0.00 O ATOM 728 N ALA 92 -0.289 10.676 12.982 1.00 0.00 N ATOM 729 CA ALA 92 0.498 9.522 13.298 1.00 0.00 C ATOM 730 CB ALA 92 1.757 9.909 14.076 1.00 0.00 C ATOM 731 C ALA 92 -0.336 8.582 14.110 1.00 0.00 C ATOM 732 O ALA 92 -0.310 7.370 13.897 1.00 0.00 O ATOM 733 N ASP 93 -1.114 9.133 15.060 1.00 0.00 N ATOM 734 CA ASP 93 -1.932 8.354 15.944 1.00 0.00 C ATOM 735 CB ASP 93 -2.432 9.226 17.142 1.00 0.00 C ATOM 736 CG ASP 93 -1.258 9.614 18.055 1.00 0.00 C ATOM 737 OD1 ASP 93 -0.081 9.418 17.699 1.00 0.00 O ATOM 738 OD2 ASP 93 -1.543 10.085 19.174 1.00 0.00 O ATOM 739 C ASP 93 -2.956 7.629 15.134 1.00 0.00 C ATOM 740 O ASP 93 -3.297 6.487 15.434 1.00 0.00 O ATOM 741 N ALA 94 -3.476 8.282 14.079 1.00 0.00 N ATOM 742 CA ALA 94 -4.487 7.676 13.264 1.00 0.00 C ATOM 743 CB ALA 94 -4.941 8.625 12.153 1.00 0.00 C ATOM 744 C ALA 94 -3.910 6.436 12.662 1.00 0.00 C ATOM 745 O ALA 94 -4.583 5.411 12.574 1.00 0.00 O ATOM 746 N ILE 95 -2.636 6.499 12.230 1.00 0.00 N ATOM 747 CA ILE 95 -1.992 5.370 11.623 1.00 0.00 C ATOM 748 CB ILE 95 -0.603 5.752 11.086 1.00 0.00 C ATOM 749 CG2 ILE 95 0.117 4.536 10.486 1.00 0.00 C ATOM 750 CG1 ILE 95 -0.724 6.864 10.041 1.00 0.00 C ATOM 751 CD1 ILE 95 0.630 7.435 9.616 1.00 0.00 C ATOM 752 C ILE 95 -1.901 4.275 12.637 1.00 0.00 C ATOM 753 O ILE 95 -2.189 3.116 12.344 1.00 0.00 O ATOM 754 N THR 96 -1.521 4.627 13.876 1.00 0.00 N ATOM 755 CA THR 96 -1.377 3.638 14.900 1.00 0.00 C ATOM 756 CB THR 96 -0.883 4.322 16.182 1.00 0.00 C ATOM 757 OG1 THR 96 0.432 4.813 15.909 1.00 0.00 O ATOM 758 CG2 THR 96 -0.856 3.432 17.437 1.00 0.00 C ATOM 759 C THR 96 -2.708 2.982 15.083 1.00 0.00 C ATOM 760 O THR 96 -2.797 1.764 15.211 1.00 0.00 O ATOM 761 N GLU 97 -3.788 3.785 15.070 1.00 0.00 N ATOM 762 CA GLU 97 -5.105 3.263 15.284 1.00 0.00 C ATOM 763 CB GLU 97 -6.231 4.316 15.350 1.00 0.00 C ATOM 764 CG GLU 97 -7.681 3.776 15.184 1.00 0.00 C ATOM 765 CD GLU 97 -8.648 4.872 14.704 1.00 0.00 C ATOM 766 OE1 GLU 97 -8.305 6.048 14.800 1.00 0.00 O ATOM 767 OE2 GLU 97 -9.758 4.571 14.242 1.00 0.00 O ATOM 768 C GLU 97 -5.444 2.297 14.190 1.00 0.00 C ATOM 769 O GLU 97 -6.055 1.261 14.447 1.00 0.00 O ATOM 770 N ARG 98 -5.045 2.604 12.941 1.00 0.00 N ATOM 771 CA ARG 98 -5.387 1.773 11.820 1.00 0.00 C ATOM 772 CB ARG 98 -4.963 2.438 10.488 1.00 0.00 C ATOM 773 CG ARG 98 -5.045 1.470 9.292 1.00 0.00 C ATOM 774 CD ARG 98 -5.628 1.979 7.952 1.00 0.00 C ATOM 775 NE ARG 98 -6.940 2.621 8.066 1.00 0.00 N ATOM 776 CZ ARG 98 -7.971 2.019 8.648 1.00 0.00 C ATOM 777 NH1 ARG 98 -7.933 0.704 8.829 1.00 0.00 H ATOM 778 NH2 ARG 98 -8.989 2.747 9.109 1.00 0.00 H ATOM 779 C ARG 98 -4.805 0.403 11.982 1.00 0.00 C ATOM 780 O ARG 98 -5.490 -0.594 11.758 1.00 0.00 O ATOM 781 N PHE 99 -3.526 0.311 12.387 1.00 0.00 N ATOM 782 CA PHE 99 -2.906 -0.980 12.491 1.00 0.00 C ATOM 783 CB PHE 99 -1.414 -0.797 12.807 1.00 0.00 C ATOM 784 CG PHE 99 -0.686 -2.120 12.914 1.00 0.00 C ATOM 785 CD1 PHE 99 -0.558 -2.950 11.776 1.00 0.00 C ATOM 786 CD2 PHE 99 -0.140 -2.500 14.157 1.00 0.00 C ATOM 787 CE1 PHE 99 0.122 -4.178 11.887 1.00 0.00 C ATOM 788 CE2 PHE 99 0.540 -3.727 14.271 1.00 0.00 C ATOM 789 CZ PHE 99 0.665 -4.554 13.134 1.00 0.00 C ATOM 790 C PHE 99 -3.614 -1.790 13.523 1.00 0.00 C ATOM 791 O PHE 99 -3.949 -2.953 13.293 1.00 0.00 O ATOM 792 N LEU 100 -3.879 -1.188 14.694 1.00 0.00 N ATOM 793 CA LEU 100 -4.505 -1.935 15.741 1.00 0.00 C ATOM 794 CB LEU 100 -4.565 -1.154 17.058 1.00 0.00 C ATOM 795 CG LEU 100 -3.305 -1.301 17.922 1.00 0.00 C ATOM 796 CD1 LEU 100 -2.111 -0.507 17.392 1.00 0.00 C ATOM 797 CD2 LEU 100 -3.595 -0.980 19.389 1.00 0.00 C ATOM 798 C LEU 100 -5.862 -2.374 15.301 1.00 0.00 C ATOM 799 O LEU 100 -6.257 -3.512 15.546 1.00 0.00 O ATOM 800 N GLU 101 -6.610 -1.502 14.603 1.00 0.00 N ATOM 801 CA GLU 101 -7.945 -1.857 14.224 1.00 0.00 C ATOM 802 CB GLU 101 -8.359 -0.685 13.249 1.00 0.00 C ATOM 803 CG GLU 101 -9.699 -0.654 12.461 1.00 0.00 C ATOM 804 CD GLU 101 -9.680 -0.048 11.067 1.00 0.00 C ATOM 805 OE1 GLU 101 -9.729 1.180 10.960 1.00 0.00 O ATOM 806 OE2 GLU 101 -9.661 -0.822 10.096 1.00 0.00 O ATOM 807 C GLU 101 -7.897 -3.064 13.340 1.00 0.00 C ATOM 808 O GLU 101 -8.717 -3.970 13.476 1.00 0.00 O ATOM 809 N GLU 102 -6.926 -3.111 12.411 1.00 0.00 N ATOM 810 CA GLU 102 -6.830 -4.220 11.508 1.00 0.00 C ATOM 811 CB GLU 102 -5.896 -3.829 10.326 1.00 0.00 C ATOM 812 CG GLU 102 -5.908 -4.723 9.062 1.00 0.00 C ATOM 813 CD GLU 102 -5.723 -3.890 7.777 1.00 0.00 C ATOM 814 OE1 GLU 102 -4.653 -3.301 7.563 1.00 0.00 O ATOM 815 OE2 GLU 102 -6.658 -3.829 6.972 1.00 0.00 O ATOM 816 C GLU 102 -6.501 -5.454 12.286 1.00 0.00 C ATOM 817 O GLU 102 -7.014 -6.532 11.991 1.00 0.00 O ATOM 818 N ALA 103 -5.633 -5.324 13.306 1.00 0.00 N ATOM 819 CA ALA 103 -5.214 -6.458 14.078 1.00 0.00 C ATOM 820 CB ALA 103 -4.166 -6.063 15.120 1.00 0.00 C ATOM 821 C ALA 103 -6.402 -7.062 14.757 1.00 0.00 C ATOM 822 O ALA 103 -6.567 -8.281 14.755 1.00 0.00 O ATOM 823 N LYS 104 -7.277 -6.230 15.353 1.00 0.00 N ATOM 824 CA LYS 104 -8.425 -6.775 16.017 1.00 0.00 C ATOM 825 CB LYS 104 -9.310 -5.735 16.682 1.00 0.00 C ATOM 826 CG LYS 104 -8.571 -5.254 17.901 1.00 0.00 C ATOM 827 CD LYS 104 -8.198 -3.803 17.643 1.00 0.00 C ATOM 828 CE LYS 104 -9.284 -2.782 17.961 1.00 0.00 C ATOM 829 NZ LYS 104 -9.081 -2.451 19.382 1.00 0.00 N ATOM 830 C LYS 104 -9.272 -7.451 14.987 1.00 0.00 C ATOM 831 O LYS 104 -9.845 -8.509 15.242 1.00 0.00 O ATOM 832 N SER 105 -9.364 -6.852 13.784 1.00 0.00 N ATOM 833 CA SER 105 -10.162 -7.411 12.732 1.00 0.00 C ATOM 834 CB SER 105 -10.210 -6.446 11.560 1.00 0.00 C ATOM 835 OG SER 105 -10.350 -5.098 12.033 1.00 0.00 O ATOM 836 C SER 105 -9.580 -8.741 12.376 1.00 0.00 C ATOM 837 O SER 105 -10.293 -9.663 11.983 1.00 0.00 O ATOM 838 N ILE 106 -8.252 -8.872 12.534 1.00 0.00 N ATOM 839 CA ILE 106 -7.549 -10.088 12.253 1.00 0.00 C ATOM 840 CB ILE 106 -6.010 -9.948 12.284 1.00 0.00 C ATOM 841 CG2 ILE 106 -5.300 -11.302 12.160 1.00 0.00 C ATOM 842 CG1 ILE 106 -5.568 -9.059 11.120 1.00 0.00 C ATOM 843 CD1 ILE 106 -4.091 -8.661 11.170 1.00 0.00 C ATOM 844 C ILE 106 -8.100 -11.125 13.176 1.00 0.00 C ATOM 845 O ILE 106 -8.199 -12.298 12.819 1.00 0.00 O ATOM 846 N GLY 107 -8.495 -10.711 14.394 1.00 0.00 N ATOM 847 CA GLY 107 -8.991 -11.659 15.342 1.00 0.00 C ATOM 848 C GLY 107 -8.161 -11.564 16.580 1.00 0.00 C ATOM 849 O GLY 107 -8.497 -12.170 17.597 1.00 0.00 O ATOM 850 N LEU 108 -7.042 -10.814 16.537 1.00 0.00 N ATOM 851 CA LEU 108 -6.284 -10.672 17.747 1.00 0.00 C ATOM 852 CB LEU 108 -4.919 -10.035 17.468 1.00 0.00 C ATOM 853 CG LEU 108 -3.789 -11.033 17.183 1.00 0.00 C ATOM 854 CD1 LEU 108 -3.552 -11.957 18.379 1.00 0.00 C ATOM 855 CD2 LEU 108 -3.970 -11.817 15.882 1.00 0.00 C ATOM 856 C LEU 108 -7.074 -9.809 18.683 1.00 0.00 C ATOM 857 O LEU 108 -7.599 -8.768 18.292 1.00 0.00 O ATOM 858 N ASP 109 -7.177 -10.235 19.957 1.00 0.00 N ATOM 859 CA ASP 109 -7.946 -9.502 20.921 1.00 0.00 C ATOM 860 CB ASP 109 -8.188 -10.425 22.122 1.00 0.00 C ATOM 861 CG ASP 109 -9.101 -9.868 23.236 1.00 0.00 C ATOM 862 OD1 ASP 109 -9.000 -8.750 23.699 1.00 0.00 O ATOM 863 OD2 ASP 109 -9.979 -10.566 23.675 1.00 0.00 O ATOM 864 C ASP 109 -7.148 -8.340 21.417 1.00 0.00 C ATOM 865 O ASP 109 -5.924 -8.308 21.317 1.00 0.00 O ATOM 866 N ASP 110 -7.859 -7.344 21.980 1.00 0.00 N ATOM 867 CA ASP 110 -7.253 -6.136 22.456 1.00 0.00 C ATOM 868 CB ASP 110 -7.989 -4.792 22.478 1.00 0.00 C ATOM 869 CG ASP 110 -7.155 -3.671 21.832 1.00 0.00 C ATOM 870 OD1 ASP 110 -6.681 -2.795 22.541 1.00 0.00 O ATOM 871 OD2 ASP 110 -7.019 -3.634 20.617 1.00 0.00 O ATOM 872 C ASP 110 -6.340 -6.451 23.595 1.00 0.00 C ATOM 873 O ASP 110 -5.271 -5.860 23.726 1.00 0.00 O ATOM 874 N GLN 111 -6.739 -7.409 24.448 1.00 0.00 N ATOM 875 CA GLN 111 -5.964 -7.707 25.612 1.00 0.00 C ATOM 876 CB GLN 111 -6.740 -8.798 26.437 1.00 0.00 C ATOM 877 CG GLN 111 -6.201 -9.568 27.691 1.00 0.00 C ATOM 878 CD GLN 111 -7.284 -10.430 28.395 1.00 0.00 C ATOM 879 OE1 GLN 111 -7.085 -11.378 29.176 1.00 0.00 O ATOM 880 NE2 GLN 111 -8.555 -10.040 28.156 1.00 0.00 N ATOM 881 C GLN 111 -4.610 -8.190 25.189 1.00 0.00 C ATOM 882 O GLN 111 -3.605 -7.835 25.802 1.00 0.00 O ATOM 883 N THR 112 -4.543 -9.029 24.140 1.00 0.00 N ATOM 884 CA THR 112 -3.275 -9.527 23.690 1.00 0.00 C ATOM 885 CB THR 112 -3.426 -10.730 22.738 1.00 0.00 C ATOM 886 OG1 THR 112 -3.968 -10.346 21.469 1.00 0.00 O ATOM 887 CG2 THR 112 -4.241 -11.861 23.375 1.00 0.00 C ATOM 888 C THR 112 -2.481 -8.389 23.130 1.00 0.00 C ATOM 889 O THR 112 -1.284 -8.263 23.385 1.00 0.00 O ATOM 890 N ALA 113 -3.146 -7.511 22.355 1.00 0.00 N ATOM 891 CA ALA 113 -2.473 -6.420 21.714 1.00 0.00 C ATOM 892 CB ALA 113 -3.436 -5.630 20.823 1.00 0.00 C ATOM 893 C ALA 113 -1.879 -5.512 22.745 1.00 0.00 C ATOM 894 O ALA 113 -0.746 -5.061 22.595 1.00 0.00 O ATOM 895 N ILE 114 -2.620 -5.233 23.834 1.00 0.00 N ATOM 896 CA ILE 114 -2.135 -4.308 24.819 1.00 0.00 C ATOM 897 CB ILE 114 -3.178 -3.859 25.862 1.00 0.00 C ATOM 898 CG2 ILE 114 -4.314 -3.139 25.130 1.00 0.00 C ATOM 899 CG1 ILE 114 -3.696 -4.979 26.767 1.00 0.00 C ATOM 900 CD1 ILE 114 -4.834 -4.573 27.706 1.00 0.00 C ATOM 901 C ILE 114 -0.883 -4.849 25.425 1.00 0.00 C ATOM 902 O ILE 114 0.028 -4.095 25.761 1.00 0.00 O ATOM 903 N GLU 115 -0.798 -6.181 25.563 1.00 0.00 N ATOM 904 CA GLU 115 0.352 -6.770 26.182 1.00 0.00 C ATOM 905 CB GLU 115 0.408 -8.297 26.289 1.00 0.00 C ATOM 906 CG GLU 115 0.667 -9.288 25.112 1.00 0.00 C ATOM 907 CD GLU 115 2.048 -9.271 24.418 1.00 0.00 C ATOM 908 OE1 GLU 115 2.994 -8.588 24.688 1.00 0.00 O ATOM 909 OE2 GLU 115 2.306 -10.061 23.564 1.00 0.00 O ATOM 910 C GLU 115 1.530 -6.466 25.314 1.00 0.00 C ATOM 911 O GLU 115 2.647 -6.289 25.795 1.00 0.00 O ATOM 912 N LEU 116 1.286 -6.375 23.997 1.00 0.00 N ATOM 913 CA LEU 116 2.308 -6.112 23.029 1.00 0.00 C ATOM 914 CB LEU 116 1.890 -6.370 21.582 1.00 0.00 C ATOM 915 CG LEU 116 2.862 -7.271 20.801 1.00 0.00 C ATOM 916 CD1 LEU 116 4.275 -6.722 20.676 1.00 0.00 C ATOM 917 CD2 LEU 116 2.962 -8.658 21.321 1.00 0.00 C ATOM 918 C LEU 116 2.833 -4.726 23.251 1.00 0.00 C ATOM 919 O LEU 116 4.008 -4.452 23.008 1.00 0.00 O ATOM 920 N LEU 117 1.974 -3.821 23.758 1.00 0.00 N ATOM 921 CA LEU 117 2.293 -2.424 23.851 1.00 0.00 C ATOM 922 CB LEU 117 1.077 -1.554 24.193 1.00 0.00 C ATOM 923 CG LEU 117 1.232 -0.083 23.774 1.00 0.00 C ATOM 924 CD1 LEU 117 -0.084 0.504 23.271 1.00 0.00 C ATOM 925 CD2 LEU 117 1.861 0.799 24.859 1.00 0.00 C ATOM 926 C LEU 117 3.460 -2.214 24.765 1.00 0.00 C ATOM 927 O LEU 117 4.281 -1.339 24.494 1.00 0.00 O ATOM 928 N ILE 118 3.590 -2.990 25.858 1.00 0.00 N ATOM 929 CA ILE 118 4.669 -2.689 26.759 1.00 0.00 C ATOM 930 CB ILE 118 4.543 -3.574 28.010 1.00 0.00 C ATOM 931 CG2 ILE 118 5.591 -3.187 29.062 1.00 0.00 C ATOM 932 CG1 ILE 118 3.133 -3.511 28.605 1.00 0.00 C ATOM 933 CD1 ILE 118 2.898 -4.562 29.693 1.00 0.00 C ATOM 934 C ILE 118 5.954 -2.966 26.052 1.00 0.00 C ATOM 935 O ILE 118 6.971 -2.311 26.278 1.00 0.00 O ATOM 936 N LYS 119 5.917 -3.982 25.170 1.00 0.00 N ATOM 937 CA LYS 119 7.066 -4.402 24.429 1.00 0.00 C ATOM 938 CB LYS 119 6.722 -5.723 23.797 1.00 0.00 C ATOM 939 CG LYS 119 6.675 -6.857 24.826 1.00 0.00 C ATOM 940 CD LYS 119 5.811 -8.031 24.267 1.00 0.00 C ATOM 941 CE LYS 119 5.930 -9.487 24.927 1.00 0.00 C ATOM 942 NZ LYS 119 4.693 -10.329 24.817 1.00 0.00 N ATOM 943 C LYS 119 7.420 -3.265 23.536 1.00 0.00 C ATOM 944 O LYS 119 8.590 -3.018 23.247 1.00 0.00 O ATOM 945 N ARG 120 6.385 -2.545 23.072 1.00 0.00 N ATOM 946 CA ARG 120 6.581 -1.434 22.195 1.00 0.00 C ATOM 947 CB ARG 120 5.330 -0.775 21.680 1.00 0.00 C ATOM 948 CG ARG 120 4.338 -1.660 20.970 1.00 0.00 C ATOM 949 CD ARG 120 3.170 -0.796 20.506 1.00 0.00 C ATOM 950 NE ARG 120 2.122 -1.746 20.204 1.00 0.00 N ATOM 951 CZ ARG 120 0.967 -1.414 19.606 1.00 0.00 C ATOM 952 NH1 ARG 120 0.517 -0.181 19.420 1.00 0.00 H ATOM 953 NH2 ARG 120 0.221 -2.417 19.195 1.00 0.00 H ATOM 954 C ARG 120 7.373 -0.423 22.953 1.00 0.00 C ATOM 955 O ARG 120 8.230 0.259 22.393 1.00 0.00 O ATOM 956 N SER 121 7.084 -0.291 24.261 1.00 0.00 N ATOM 957 CA SER 121 7.770 0.686 25.049 1.00 0.00 C ATOM 958 CB SER 121 7.103 0.762 26.430 1.00 0.00 C ATOM 959 OG SER 121 8.016 1.034 27.506 1.00 0.00 O ATOM 960 C SER 121 9.213 0.310 25.084 1.00 0.00 C ATOM 961 O SER 121 10.095 1.166 25.142 1.00 0.00 O ATOM 962 N ARG 122 9.477 -1.009 25.082 1.00 0.00 N ATOM 963 CA ARG 122 10.820 -1.497 25.119 1.00 0.00 C ATOM 964 CB ARG 122 10.784 -3.014 25.311 1.00 0.00 C ATOM 965 CG ARG 122 12.147 -3.698 25.279 1.00 0.00 C ATOM 966 CD ARG 122 12.112 -4.918 24.367 1.00 0.00 C ATOM 967 NE ARG 122 12.028 -4.476 22.968 1.00 0.00 N ATOM 968 CZ ARG 122 11.161 -4.998 22.064 1.00 0.00 C ATOM 969 NH1 ARG 122 10.229 -5.868 22.391 1.00 0.00 H ATOM 970 NH2 ARG 122 11.250 -4.540 20.829 1.00 0.00 H ATOM 971 C ARG 122 11.479 -1.046 23.861 1.00 0.00 C ATOM 972 O ARG 122 12.672 -0.751 23.845 1.00 0.00 O ATOM 973 N ASN 123 10.713 -1.007 22.755 1.00 0.00 N ATOM 974 CA ASN 123 11.280 -0.546 21.526 1.00 0.00 C ATOM 975 CB ASN 123 10.838 -1.380 20.342 1.00 0.00 C ATOM 976 CG ASN 123 12.014 -2.053 19.676 1.00 0.00 C ATOM 977 OD1 ASN 123 12.931 -2.646 20.252 1.00 0.00 O ATOM 978 ND2 ASN 123 11.771 -2.126 18.388 1.00 0.00 N ATOM 979 C ASN 123 10.708 0.809 21.285 1.00 0.00 C ATOM 980 O ASN 123 9.498 0.959 21.122 1.00 0.00 O TER 1001 GLU 125 END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 313 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 23.48 92.1 76 100.0 76 ARMSMC SECONDARY STRUCTURE . . 5.44 100.0 64 100.0 64 ARMSMC SURFACE . . . . . . . . 24.11 91.7 72 100.0 72 ARMSMC BURIED . . . . . . . . 3.05 100.0 4 100.0 4 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 87.62 32.4 34 100.0 34 ARMSSC1 RELIABLE SIDE CHAINS . 87.62 32.4 34 100.0 34 ARMSSC1 SECONDARY STRUCTURE . . 83.86 39.3 28 100.0 28 ARMSSC1 SURFACE . . . . . . . . 87.62 32.4 34 100.0 34 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 78.43 40.0 30 100.0 30 ARMSSC2 RELIABLE SIDE CHAINS . 69.41 47.8 23 100.0 23 ARMSSC2 SECONDARY STRUCTURE . . 78.57 41.7 24 100.0 24 ARMSSC2 SURFACE . . . . . . . . 78.43 40.0 30 100.0 30 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 68.62 35.7 14 100.0 14 ARMSSC3 RELIABLE SIDE CHAINS . 70.83 41.7 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 64.67 38.5 13 100.0 13 ARMSSC3 SURFACE . . . . . . . . 68.62 35.7 14 100.0 14 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 84.68 14.3 7 100.0 7 ARMSSC4 RELIABLE SIDE CHAINS . 84.68 14.3 7 100.0 7 ARMSSC4 SECONDARY STRUCTURE . . 89.38 16.7 6 100.0 6 ARMSSC4 SURFACE . . . . . . . . 84.68 14.3 7 100.0 7 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 2.04 (Number of atoms: 39) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 2.04 39 100.0 39 CRMSCA CRN = ALL/NP . . . . . 0.0524 CRMSCA SECONDARY STRUCTURE . . 2.01 32 100.0 32 CRMSCA SURFACE . . . . . . . . 2.09 37 100.0 37 CRMSCA BURIED . . . . . . . . 0.98 2 100.0 2 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 2.19 194 100.0 194 CRMSMC SECONDARY STRUCTURE . . 2.01 160 100.0 160 CRMSMC SURFACE . . . . . . . . 2.23 184 100.0 184 CRMSMC BURIED . . . . . . . . 1.03 10 100.0 10 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 4.50 157 100.0 157 CRMSSC RELIABLE SIDE CHAINS . 4.51 139 100.0 139 CRMSSC SECONDARY STRUCTURE . . 4.37 130 100.0 130 CRMSSC SURFACE . . . . . . . . 4.53 155 100.0 155 CRMSSC BURIED . . . . . . . . 1.45 2 100.0 2 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 3.51 313 100.0 313 CRMSALL SECONDARY STRUCTURE . . 3.36 258 100.0 258 CRMSALL SURFACE . . . . . . . . 3.56 303 100.0 303 CRMSALL BURIED . . . . . . . . 1.03 10 100.0 10 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.820 1.000 0.500 39 100.0 39 ERRCA SECONDARY STRUCTURE . . 1.849 1.000 0.500 32 100.0 32 ERRCA SURFACE . . . . . . . . 1.866 1.000 0.500 37 100.0 37 ERRCA BURIED . . . . . . . . 0.965 1.000 0.500 2 100.0 2 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.864 1.000 0.500 194 100.0 194 ERRMC SECONDARY STRUCTURE . . 1.812 1.000 0.500 160 100.0 160 ERRMC SURFACE . . . . . . . . 1.914 1.000 0.500 184 100.0 184 ERRMC BURIED . . . . . . . . 0.950 1.000 0.500 10 100.0 10 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.915 1.000 0.500 157 100.0 157 ERRSC RELIABLE SIDE CHAINS . 3.888 1.000 0.500 139 100.0 139 ERRSC SECONDARY STRUCTURE . . 3.868 1.000 0.500 130 100.0 130 ERRSC SURFACE . . . . . . . . 3.948 1.000 0.500 155 100.0 155 ERRSC BURIED . . . . . . . . 1.342 1.000 0.500 2 100.0 2 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.828 1.000 0.500 313 100.0 313 ERRALL SECONDARY STRUCTURE . . 2.771 1.000 0.500 258 100.0 258 ERRALL SURFACE . . . . . . . . 2.890 1.000 0.500 303 100.0 303 ERRALL BURIED . . . . . . . . 0.950 1.000 0.500 10 100.0 10 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 7 25 37 38 39 39 39 DISTCA CA (P) 17.95 64.10 94.87 97.44 100.00 39 DISTCA CA (RMS) 0.80 1.30 1.83 1.90 2.04 DISTCA ALL (N) 38 138 214 270 309 313 313 DISTALL ALL (P) 12.14 44.09 68.37 86.26 98.72 313 DISTALL ALL (RMS) 0.72 1.34 1.85 2.44 3.29 DISTALL END of the results output