####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 39 ( 313), selected 39 , name T0586TS386_1-D2 # Molecule2: number of CA atoms 39 ( 313), selected 39 , name T0586-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0586TS386_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 39 85 - 123 1.50 1.50 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 39 85 - 123 1.50 1.50 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 85 - 109 0.87 4.59 LCS_AVERAGE: 62.26 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 39 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT D 85 D 85 25 39 39 17 22 24 36 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT Q 86 Q 86 25 39 39 17 22 24 35 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 87 L 87 25 39 39 17 22 26 36 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 88 K 88 25 39 39 17 22 24 36 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 89 K 89 25 39 39 17 22 24 36 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 90 E 90 25 39 39 17 22 26 36 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 91 L 91 25 39 39 17 22 26 36 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 92 A 92 25 39 39 17 22 24 36 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT D 93 D 93 25 39 39 17 22 24 35 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 94 A 94 25 39 39 17 22 26 36 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 95 I 95 25 39 39 17 22 24 36 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT T 96 T 96 25 39 39 17 22 24 36 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 97 E 97 25 39 39 17 22 26 36 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT R 98 R 98 25 39 39 17 22 26 36 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT F 99 F 99 25 39 39 17 22 24 36 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 100 L 100 25 39 39 17 22 24 36 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 101 E 101 25 39 39 17 22 26 36 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 102 E 102 25 39 39 17 22 26 36 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 103 A 103 25 39 39 17 22 26 36 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 104 K 104 25 39 39 17 22 26 36 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT S 105 S 105 25 39 39 17 22 24 36 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 106 I 106 25 39 39 5 22 26 36 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT G 107 G 107 25 39 39 13 22 26 36 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 108 L 108 25 39 39 14 19 26 36 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT D 109 D 109 25 39 39 7 19 26 36 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT D 110 D 110 23 39 39 14 19 26 36 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT Q 111 Q 111 23 39 39 14 19 26 36 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT T 112 T 112 23 39 39 14 19 26 36 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 113 A 113 23 39 39 14 19 26 36 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 114 I 114 23 39 39 14 19 26 36 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 115 E 115 23 39 39 14 19 26 36 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 116 L 116 23 39 39 14 19 26 36 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 117 L 117 23 39 39 14 19 26 36 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 118 I 118 23 39 39 14 19 26 36 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 119 K 119 23 39 39 14 19 26 36 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT R 120 R 120 23 39 39 14 19 26 35 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT S 121 S 121 23 39 39 14 19 26 36 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT R 122 R 122 23 39 39 14 19 26 36 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT N 123 N 123 23 39 39 11 19 26 36 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_AVERAGE LCS_A: 87.42 ( 62.26 100.00 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 17 22 26 36 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 39 GDT PERCENT_AT 43.59 56.41 66.67 92.31 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.30 0.46 0.92 1.43 1.50 1.50 1.50 1.50 1.50 1.50 1.50 1.50 1.50 1.50 1.50 1.50 1.50 1.50 1.50 1.50 GDT RMS_ALL_AT 6.94 6.44 1.93 1.50 1.50 1.50 1.50 1.50 1.50 1.50 1.50 1.50 1.50 1.50 1.50 1.50 1.50 1.50 1.50 1.50 # Checking swapping # possible swapping detected: D 85 D 85 # possible swapping detected: D 93 D 93 # possible swapping detected: E 101 E 101 # possible swapping detected: E 115 E 115 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA D 85 D 85 1.651 0 0.057 0.090 3.675 77.262 63.690 LGA Q 86 Q 86 2.200 0 0.057 1.204 6.911 70.833 49.735 LGA L 87 L 87 1.788 0 0.039 1.408 7.215 79.286 54.583 LGA K 88 K 88 1.572 0 0.025 1.028 7.629 79.405 57.143 LGA K 89 K 89 2.042 0 0.036 0.843 8.520 72.976 47.725 LGA E 90 E 90 1.375 0 0.045 0.404 3.290 85.952 70.952 LGA L 91 L 91 1.172 0 0.049 0.069 2.858 83.690 73.333 LGA A 92 A 92 2.054 0 0.033 0.040 2.761 70.952 68.190 LGA D 93 D 93 2.079 0 0.042 1.013 3.191 75.119 71.667 LGA A 94 A 94 1.260 0 0.041 0.046 1.964 85.952 83.333 LGA I 95 I 95 1.881 0 0.035 0.103 3.976 75.000 61.726 LGA T 96 T 96 2.043 0 0.054 1.088 4.509 70.833 62.381 LGA E 97 E 97 1.386 0 0.041 0.749 4.007 85.952 67.884 LGA R 98 R 98 0.953 0 0.060 1.880 9.577 88.333 52.814 LGA F 99 F 99 2.032 0 0.024 0.134 5.867 72.976 48.182 LGA L 100 L 100 1.885 0 0.053 0.069 3.700 75.000 62.679 LGA E 101 E 101 1.198 0 0.028 0.957 3.632 85.952 71.005 LGA E 102 E 102 1.289 0 0.036 0.202 2.725 83.690 73.228 LGA A 103 A 103 1.162 0 0.032 0.053 1.820 88.214 85.143 LGA K 104 K 104 1.334 0 0.043 0.773 4.039 81.548 63.492 LGA S 105 S 105 2.039 0 0.075 0.100 2.583 70.952 66.349 LGA I 106 I 106 1.290 0 0.239 1.314 3.233 77.262 71.310 LGA G 107 G 107 0.347 0 0.130 0.130 0.457 100.000 100.000 LGA L 108 L 108 0.784 0 0.129 0.217 1.275 88.214 90.595 LGA D 109 D 109 1.624 0 0.031 1.023 4.109 79.286 67.619 LGA D 110 D 110 1.584 0 0.040 0.168 2.757 77.143 72.024 LGA Q 111 Q 111 1.636 0 0.038 0.866 4.138 77.143 68.148 LGA T 112 T 112 0.885 0 0.031 0.063 1.630 92.976 86.803 LGA A 113 A 113 0.414 0 0.034 0.047 0.819 95.238 94.286 LGA I 114 I 114 1.332 0 0.034 0.122 3.179 85.952 74.583 LGA E 115 E 115 0.709 0 0.034 0.699 3.816 95.238 76.085 LGA L 116 L 116 0.703 0 0.029 0.329 1.209 90.595 88.274 LGA L 117 L 117 1.356 0 0.023 0.134 2.430 83.690 76.250 LGA I 118 I 118 0.818 0 0.019 1.169 3.451 90.476 77.083 LGA K 119 K 119 0.795 0 0.036 0.759 2.468 88.333 79.788 LGA R 120 R 120 1.944 0 0.039 1.095 7.947 70.833 49.870 LGA S 121 S 121 1.794 0 0.119 0.737 2.493 77.143 74.365 LGA R 122 R 122 1.355 0 0.168 1.042 3.120 75.000 70.216 LGA N 123 N 123 1.508 0 0.282 1.106 5.610 57.262 52.798 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 39 156 156 100.00 313 313 100.00 39 SUMMARY(RMSD_GDC): 1.499 1.424 2.603 81.068 69.880 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 39 39 4.0 39 1.50 87.179 93.534 2.439 LGA_LOCAL RMSD: 1.499 Number of atoms: 39 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 1.499 Number of assigned atoms: 39 Std_ASGN_ATOMS RMSD: 1.499 Standard rmsd on all 39 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.255373 * X + 0.903903 * Y + 0.343140 * Z + -31.990198 Y_new = -0.506700 * X + -0.427387 * Y + 0.748729 * Z + 53.740627 Z_new = 0.823432 * X + 0.017336 * Y + 0.567151 * Z + -16.939899 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.037632 -0.967433 0.030557 [DEG: -116.7477 -55.4298 1.7508 ] ZXZ: 2.711861 0.967754 1.549746 [DEG: 155.3782 55.4482 88.7939 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0586TS386_1-D2 REMARK 2: T0586-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0586TS386_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 39 39 4.0 39 1.50 93.534 1.50 REMARK ---------------------------------------------------------- MOLECULE T0586TS386_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0586 REMARK MODEL 1 REMARK PARENT N/A ATOM 668 N ASP 85 2.485 20.602 15.100 1.00 0.00 N ATOM 669 CA ASP 85 2.888 19.408 15.780 1.00 0.00 C ATOM 670 CB ASP 85 3.662 19.678 17.083 1.00 0.00 C ATOM 671 CG ASP 85 5.060 20.165 16.731 1.00 0.00 C ATOM 672 OD1 ASP 85 5.454 20.032 15.542 1.00 0.00 O ATOM 673 OD2 ASP 85 5.755 20.671 17.654 1.00 0.00 O ATOM 674 C ASP 85 1.660 18.652 16.162 1.00 0.00 C ATOM 675 O ASP 85 1.611 17.432 16.019 1.00 0.00 O ATOM 676 N GLN 86 0.623 19.365 16.643 1.00 0.00 N ATOM 677 CA GLN 86 -0.567 18.698 17.088 1.00 0.00 C ATOM 678 CB GLN 86 -1.624 19.643 17.689 1.00 0.00 C ATOM 679 CG GLN 86 -1.214 20.254 19.030 1.00 0.00 C ATOM 680 CD GLN 86 -2.338 21.161 19.513 1.00 0.00 C ATOM 681 OE1 GLN 86 -1.775 20.958 18.438 1.00 0.00 O ATOM 682 NE2 GLN 86 -2.262 20.710 20.793 1.00 0.00 N ATOM 683 C GLN 86 -1.203 17.989 15.937 1.00 0.00 C ATOM 684 O GLN 86 -1.653 16.853 16.080 1.00 0.00 O ATOM 685 N LEU 87 -1.245 18.630 14.755 1.00 0.00 N ATOM 686 CA LEU 87 -1.878 18.021 13.620 1.00 0.00 C ATOM 687 CB LEU 87 -1.825 18.907 12.365 1.00 0.00 C ATOM 688 CG LEU 87 -2.590 20.235 12.507 1.00 0.00 C ATOM 689 CD1 LEU 87 -2.500 21.068 11.220 1.00 0.00 C ATOM 690 CD2 LEU 87 -4.042 20.003 12.960 1.00 0.00 C ATOM 691 C LEU 87 -1.128 16.768 13.295 1.00 0.00 C ATOM 692 O LEU 87 -1.725 15.751 12.951 1.00 0.00 O ATOM 693 N LYS 88 0.213 16.817 13.400 1.00 0.00 N ATOM 694 CA LYS 88 1.036 15.689 13.065 1.00 0.00 C ATOM 695 CB LYS 88 2.535 15.980 13.249 1.00 0.00 C ATOM 696 CG LYS 88 3.472 14.915 12.668 1.00 0.00 C ATOM 697 CD LYS 88 3.393 13.531 13.294 1.00 0.00 C ATOM 698 CE LYS 88 4.454 12.582 12.735 1.00 0.00 C ATOM 699 NZ LYS 88 4.293 12.444 11.269 1.00 0.00 N ATOM 700 C LYS 88 0.696 14.561 13.979 1.00 0.00 C ATOM 701 O LYS 88 0.583 13.413 13.551 1.00 0.00 O ATOM 702 N LYS 89 0.506 14.876 15.271 1.00 0.00 N ATOM 703 CA LYS 89 0.205 13.873 16.248 1.00 0.00 C ATOM 704 CB LYS 89 -0.014 14.469 17.651 1.00 0.00 C ATOM 705 CG LYS 89 -0.374 13.437 18.722 1.00 0.00 C ATOM 706 CD LYS 89 0.760 12.480 19.085 1.00 0.00 C ATOM 707 CE LYS 89 0.366 11.461 20.156 1.00 0.00 C ATOM 708 NZ LYS 89 1.500 10.553 20.438 1.00 0.00 N ATOM 709 C LYS 89 -1.070 13.201 15.856 1.00 0.00 C ATOM 710 O LYS 89 -1.197 11.982 15.962 1.00 0.00 O ATOM 711 N GLU 90 -2.046 13.991 15.373 1.00 0.00 N ATOM 712 CA GLU 90 -3.332 13.464 15.024 1.00 0.00 C ATOM 713 CB GLU 90 -4.317 14.549 14.561 1.00 0.00 C ATOM 714 CG GLU 90 -4.699 15.516 15.682 1.00 0.00 C ATOM 715 CD GLU 90 -5.677 16.536 15.122 1.00 0.00 C ATOM 716 OE1 GLU 90 -5.378 17.125 14.048 1.00 0.00 O ATOM 717 OE2 GLU 90 -6.744 16.735 15.761 1.00 0.00 O ATOM 718 C GLU 90 -3.174 12.475 13.916 1.00 0.00 C ATOM 719 O GLU 90 -3.821 11.429 13.911 1.00 0.00 O ATOM 720 N LEU 91 -2.306 12.775 12.939 1.00 0.00 N ATOM 721 CA LEU 91 -2.150 11.863 11.847 1.00 0.00 C ATOM 722 CB LEU 91 -1.162 12.369 10.782 1.00 0.00 C ATOM 723 CG LEU 91 -1.651 13.617 10.028 1.00 0.00 C ATOM 724 CD1 LEU 91 -0.623 14.072 8.981 1.00 0.00 C ATOM 725 CD2 LEU 91 -3.049 13.394 9.428 1.00 0.00 C ATOM 726 C LEU 91 -1.610 10.577 12.379 1.00 0.00 C ATOM 727 O LEU 91 -2.082 9.502 12.014 1.00 0.00 O ATOM 728 N ALA 92 -0.606 10.657 13.270 1.00 0.00 N ATOM 729 CA ALA 92 0.028 9.478 13.781 1.00 0.00 C ATOM 730 CB ALA 92 1.201 9.799 14.720 1.00 0.00 C ATOM 731 C ALA 92 -0.942 8.651 14.561 1.00 0.00 C ATOM 732 O ALA 92 -1.023 7.440 14.364 1.00 0.00 O ATOM 733 N ASP 93 -1.725 9.275 15.461 1.00 0.00 N ATOM 734 CA ASP 93 -2.587 8.450 16.252 1.00 0.00 C ATOM 735 CB ASP 93 -3.146 9.082 17.552 1.00 0.00 C ATOM 736 CG ASP 93 -3.950 10.340 17.303 1.00 0.00 C ATOM 737 OD1 ASP 93 -3.543 11.123 16.412 1.00 0.00 O ATOM 738 OD2 ASP 93 -4.970 10.546 18.013 1.00 0.00 O ATOM 739 C ASP 93 -3.658 7.834 15.406 1.00 0.00 C ATOM 740 O ASP 93 -4.098 6.719 15.685 1.00 0.00 O ATOM 741 N ALA 94 -4.115 8.526 14.347 1.00 0.00 N ATOM 742 CA ALA 94 -5.130 7.952 13.510 1.00 0.00 C ATOM 743 CB ALA 94 -5.560 8.883 12.364 1.00 0.00 C ATOM 744 C ALA 94 -4.574 6.708 12.888 1.00 0.00 C ATOM 745 O ALA 94 -5.257 5.689 12.797 1.00 0.00 O ATOM 746 N ILE 95 -3.303 6.770 12.447 1.00 0.00 N ATOM 747 CA ILE 95 -2.659 5.652 11.819 1.00 0.00 C ATOM 748 CB ILE 95 -1.284 5.979 11.314 1.00 0.00 C ATOM 749 CG2 ILE 95 -0.625 4.670 10.852 1.00 0.00 C ATOM 750 CG1 ILE 95 -1.361 7.050 10.214 1.00 0.00 C ATOM 751 CD1 ILE 95 -0.003 7.645 9.845 1.00 0.00 C ATOM 752 C ILE 95 -2.531 4.550 12.819 1.00 0.00 C ATOM 753 O ILE 95 -2.762 3.385 12.503 1.00 0.00 O ATOM 754 N THR 96 -2.164 4.901 14.064 1.00 0.00 N ATOM 755 CA THR 96 -1.974 3.922 15.093 1.00 0.00 C ATOM 756 CB THR 96 -1.603 4.549 16.406 1.00 0.00 C ATOM 757 OG1 THR 96 -0.406 5.301 16.271 1.00 0.00 O ATOM 758 CG2 THR 96 -1.416 3.439 17.453 1.00 0.00 C ATOM 759 C THR 96 -3.271 3.206 15.286 1.00 0.00 C ATOM 760 O THR 96 -3.300 1.983 15.420 1.00 0.00 O ATOM 761 N GLU 97 -4.388 3.955 15.288 1.00 0.00 N ATOM 762 CA GLU 97 -5.668 3.345 15.492 1.00 0.00 C ATOM 763 CB GLU 97 -6.856 4.318 15.447 1.00 0.00 C ATOM 764 CG GLU 97 -7.107 5.102 16.729 1.00 0.00 C ATOM 765 CD GLU 97 -8.446 5.801 16.543 1.00 0.00 C ATOM 766 OE1 GLU 97 -8.514 6.735 15.701 1.00 0.00 O ATOM 767 OE2 GLU 97 -9.422 5.401 17.231 1.00 0.00 O ATOM 768 C GLU 97 -5.930 2.377 14.390 1.00 0.00 C ATOM 769 O GLU 97 -6.444 1.284 14.621 1.00 0.00 O ATOM 770 N ARG 98 -5.572 2.756 13.154 1.00 0.00 N ATOM 771 CA ARG 98 -5.894 1.963 12.006 1.00 0.00 C ATOM 772 CB ARG 98 -5.416 2.639 10.710 1.00 0.00 C ATOM 773 CG ARG 98 -6.202 2.237 9.465 1.00 0.00 C ATOM 774 CD ARG 98 -5.969 0.805 8.995 1.00 0.00 C ATOM 775 NE ARG 98 -6.815 0.612 7.784 1.00 0.00 N ATOM 776 CZ ARG 98 -8.106 0.185 7.908 1.00 0.00 C ATOM 777 NH1 ARG 98 -8.617 -0.092 9.142 1.00 0.00 H ATOM 778 NH2 ARG 98 -8.884 0.035 6.799 1.00 0.00 H ATOM 779 C ARG 98 -5.224 0.627 12.112 1.00 0.00 C ATOM 780 O ARG 98 -5.838 -0.403 11.842 1.00 0.00 O ATOM 781 N PHE 99 -3.942 0.607 12.526 1.00 0.00 N ATOM 782 CA PHE 99 -3.193 -0.619 12.597 1.00 0.00 C ATOM 783 CB PHE 99 -1.729 -0.382 13.010 1.00 0.00 C ATOM 784 CG PHE 99 -0.996 -1.679 12.936 1.00 0.00 C ATOM 785 CD1 PHE 99 -0.509 -2.135 11.734 1.00 0.00 C ATOM 786 CD2 PHE 99 -0.785 -2.433 14.068 1.00 0.00 C ATOM 787 CE1 PHE 99 0.170 -3.329 11.658 1.00 0.00 C ATOM 788 CE2 PHE 99 -0.107 -3.627 13.998 1.00 0.00 C ATOM 789 CZ PHE 99 0.373 -4.077 12.792 1.00 0.00 C ATOM 790 C PHE 99 -3.819 -1.518 13.615 1.00 0.00 C ATOM 791 O PHE 99 -4.016 -2.709 13.372 1.00 0.00 O ATOM 792 N LEU 100 -4.165 -0.956 14.787 1.00 0.00 N ATOM 793 CA LEU 100 -4.726 -1.738 15.848 1.00 0.00 C ATOM 794 CB LEU 100 -4.987 -0.919 17.127 1.00 0.00 C ATOM 795 CG LEU 100 -3.701 -0.415 17.814 1.00 0.00 C ATOM 796 CD1 LEU 100 -4.021 0.394 19.082 1.00 0.00 C ATOM 797 CD2 LEU 100 -2.722 -1.569 18.085 1.00 0.00 C ATOM 798 C LEU 100 -6.034 -2.300 15.389 1.00 0.00 C ATOM 799 O LEU 100 -6.352 -3.452 15.677 1.00 0.00 O ATOM 800 N GLU 101 -6.827 -1.503 14.652 1.00 0.00 N ATOM 801 CA GLU 101 -8.113 -1.963 14.216 1.00 0.00 C ATOM 802 CB GLU 101 -8.903 -0.901 13.434 1.00 0.00 C ATOM 803 CG GLU 101 -9.371 0.264 14.304 1.00 0.00 C ATOM 804 CD GLU 101 -10.137 1.244 13.428 1.00 0.00 C ATOM 805 OE1 GLU 101 -10.216 1.010 12.193 1.00 0.00 O ATOM 806 OE2 GLU 101 -10.657 2.245 13.988 1.00 0.00 O ATOM 807 C GLU 101 -7.928 -3.143 13.318 1.00 0.00 C ATOM 808 O GLU 101 -8.675 -4.117 13.401 1.00 0.00 O ATOM 809 N GLU 102 -6.915 -3.092 12.434 1.00 0.00 N ATOM 810 CA GLU 102 -6.686 -4.159 11.506 1.00 0.00 C ATOM 811 CB GLU 102 -5.527 -3.855 10.537 1.00 0.00 C ATOM 812 CG GLU 102 -5.321 -4.919 9.457 1.00 0.00 C ATOM 813 CD GLU 102 -4.227 -4.433 8.514 1.00 0.00 C ATOM 814 OE1 GLU 102 -3.768 -3.272 8.686 1.00 0.00 O ATOM 815 OE2 GLU 102 -3.837 -5.214 7.607 1.00 0.00 O ATOM 816 C GLU 102 -6.341 -5.399 12.271 1.00 0.00 C ATOM 817 O GLU 102 -6.804 -6.489 11.940 1.00 0.00 O ATOM 818 N ALA 103 -5.523 -5.259 13.330 1.00 0.00 N ATOM 819 CA ALA 103 -5.095 -6.393 14.096 1.00 0.00 C ATOM 820 CB ALA 103 -4.130 -6.015 15.233 1.00 0.00 C ATOM 821 C ALA 103 -6.284 -7.043 14.728 1.00 0.00 C ATOM 822 O ALA 103 -6.401 -8.268 14.739 1.00 0.00 O ATOM 823 N LYS 104 -7.209 -6.229 15.264 1.00 0.00 N ATOM 824 CA LYS 104 -8.363 -6.734 15.947 1.00 0.00 C ATOM 825 CB LYS 104 -9.226 -5.593 16.515 1.00 0.00 C ATOM 826 CG LYS 104 -10.162 -5.987 17.661 1.00 0.00 C ATOM 827 CD LYS 104 -11.251 -6.998 17.300 1.00 0.00 C ATOM 828 CE LYS 104 -12.157 -7.351 18.481 1.00 0.00 C ATOM 829 NZ LYS 104 -12.997 -6.186 18.840 1.00 0.00 N ATOM 830 C LYS 104 -9.182 -7.510 14.960 1.00 0.00 C ATOM 831 O LYS 104 -9.710 -8.574 15.284 1.00 0.00 O ATOM 832 N SER 105 -9.303 -6.999 13.717 1.00 0.00 N ATOM 833 CA SER 105 -10.095 -7.667 12.723 1.00 0.00 C ATOM 834 CB SER 105 -10.295 -6.853 11.429 1.00 0.00 C ATOM 835 OG SER 105 -9.073 -6.702 10.725 1.00 0.00 O ATOM 836 C SER 105 -9.437 -8.966 12.383 1.00 0.00 C ATOM 837 O SER 105 -10.104 -9.934 12.023 1.00 0.00 O ATOM 838 N ILE 106 -8.099 -9.018 12.504 1.00 0.00 N ATOM 839 CA ILE 106 -7.365 -10.223 12.249 1.00 0.00 C ATOM 840 CB ILE 106 -5.875 -10.079 12.381 1.00 0.00 C ATOM 841 CG2 ILE 106 -5.261 -11.488 12.357 1.00 0.00 C ATOM 842 CG1 ILE 106 -5.323 -9.152 11.285 1.00 0.00 C ATOM 843 CD1 ILE 106 -3.852 -8.786 11.477 1.00 0.00 C ATOM 844 C ILE 106 -7.832 -11.229 13.249 1.00 0.00 C ATOM 845 O ILE 106 -7.878 -12.423 12.964 1.00 0.00 O ATOM 846 N GLY 107 -8.206 -10.767 14.456 1.00 0.00 N ATOM 847 CA GLY 107 -8.631 -11.688 15.466 1.00 0.00 C ATOM 848 C GLY 107 -7.701 -11.570 16.626 1.00 0.00 C ATOM 849 O GLY 107 -7.885 -12.231 17.646 1.00 0.00 O ATOM 850 N LEU 108 -6.665 -10.720 16.498 1.00 0.00 N ATOM 851 CA LEU 108 -5.768 -10.535 17.597 1.00 0.00 C ATOM 852 CB LEU 108 -4.562 -9.657 17.220 1.00 0.00 C ATOM 853 CG LEU 108 -3.450 -9.615 18.278 1.00 0.00 C ATOM 854 CD1 LEU 108 -2.813 -11.001 18.466 1.00 0.00 C ATOM 855 CD2 LEU 108 -2.407 -8.538 17.944 1.00 0.00 C ATOM 856 C LEU 108 -6.568 -9.850 18.664 1.00 0.00 C ATOM 857 O LEU 108 -7.303 -8.904 18.385 1.00 0.00 O ATOM 858 N ASP 109 -6.454 -10.330 19.921 1.00 0.00 N ATOM 859 CA ASP 109 -7.225 -9.806 21.016 1.00 0.00 C ATOM 860 CB ASP 109 -7.217 -10.695 22.272 1.00 0.00 C ATOM 861 CG ASP 109 -8.078 -11.924 22.036 1.00 0.00 C ATOM 862 OD1 ASP 109 -8.841 -11.933 21.034 1.00 0.00 O ATOM 863 OD2 ASP 109 -7.990 -12.871 22.863 1.00 0.00 O ATOM 864 C ASP 109 -6.667 -8.489 21.452 1.00 0.00 C ATOM 865 O ASP 109 -5.485 -8.202 21.270 1.00 0.00 O ATOM 866 N ASP 110 -7.536 -7.656 22.059 1.00 0.00 N ATOM 867 CA ASP 110 -7.156 -6.359 22.542 1.00 0.00 C ATOM 868 CB ASP 110 -8.339 -5.566 23.125 1.00 0.00 C ATOM 869 CG ASP 110 -9.222 -5.096 21.980 1.00 0.00 C ATOM 870 OD1 ASP 110 -8.741 -5.114 20.816 1.00 0.00 O ATOM 871 OD2 ASP 110 -10.388 -4.705 22.257 1.00 0.00 O ATOM 872 C ASP 110 -6.164 -6.522 23.643 1.00 0.00 C ATOM 873 O ASP 110 -5.178 -5.790 23.719 1.00 0.00 O ATOM 874 N GLN 111 -6.390 -7.509 24.529 1.00 0.00 N ATOM 875 CA GLN 111 -5.513 -7.672 25.651 1.00 0.00 C ATOM 876 CB GLN 111 -5.955 -8.804 26.589 1.00 0.00 C ATOM 877 CG GLN 111 -7.281 -8.512 27.288 1.00 0.00 C ATOM 878 CD GLN 111 -7.613 -9.692 28.186 1.00 0.00 C ATOM 879 OE1 GLN 111 -6.870 -10.670 28.264 1.00 0.00 O ATOM 880 NE2 GLN 111 -8.772 -9.598 28.890 1.00 0.00 N ATOM 881 C GLN 111 -4.148 -8.002 25.147 1.00 0.00 C ATOM 882 O GLN 111 -3.154 -7.503 25.669 1.00 0.00 O ATOM 883 N THR 112 -4.070 -8.856 24.111 1.00 0.00 N ATOM 884 CA THR 112 -2.803 -9.255 23.571 1.00 0.00 C ATOM 885 CB THR 112 -2.936 -10.317 22.519 1.00 0.00 C ATOM 886 OG1 THR 112 -3.588 -11.457 23.058 1.00 0.00 O ATOM 887 CG2 THR 112 -1.529 -10.704 22.034 1.00 0.00 C ATOM 888 C THR 112 -2.142 -8.067 22.948 1.00 0.00 C ATOM 889 O THR 112 -0.933 -7.882 23.069 1.00 0.00 O ATOM 890 N ALA 113 -2.929 -7.217 22.264 1.00 0.00 N ATOM 891 CA ALA 113 -2.361 -6.084 21.596 1.00 0.00 C ATOM 892 CB ALA 113 -3.414 -5.235 20.861 1.00 0.00 C ATOM 893 C ALA 113 -1.706 -5.208 22.614 1.00 0.00 C ATOM 894 O ALA 113 -0.616 -4.688 22.384 1.00 0.00 O ATOM 895 N ILE 114 -2.353 -5.030 23.780 1.00 0.00 N ATOM 896 CA ILE 114 -1.814 -4.163 24.786 1.00 0.00 C ATOM 897 CB ILE 114 -2.710 -4.044 25.985 1.00 0.00 C ATOM 898 CG2 ILE 114 -1.956 -3.256 27.070 1.00 0.00 C ATOM 899 CG1 ILE 114 -4.052 -3.411 25.581 1.00 0.00 C ATOM 900 CD1 ILE 114 -5.126 -3.506 26.662 1.00 0.00 C ATOM 901 C ILE 114 -0.500 -4.704 25.247 1.00 0.00 C ATOM 902 O ILE 114 0.470 -3.958 25.383 1.00 0.00 O ATOM 903 N GLU 115 -0.424 -6.024 25.494 1.00 0.00 N ATOM 904 CA GLU 115 0.793 -6.596 25.986 1.00 0.00 C ATOM 905 CB GLU 115 0.649 -8.078 26.399 1.00 0.00 C ATOM 906 CG GLU 115 0.182 -9.027 25.295 1.00 0.00 C ATOM 907 CD GLU 115 0.094 -10.430 25.883 1.00 0.00 C ATOM 908 OE1 GLU 115 1.119 -10.903 26.445 1.00 0.00 O ATOM 909 OE2 GLU 115 -1.000 -11.047 25.783 1.00 0.00 O ATOM 910 C GLU 115 1.868 -6.457 24.951 1.00 0.00 C ATOM 911 O GLU 115 3.014 -6.156 25.282 1.00 0.00 O ATOM 912 N LEU 116 1.530 -6.654 23.663 1.00 0.00 N ATOM 913 CA LEU 116 2.532 -6.550 22.640 1.00 0.00 C ATOM 914 CB LEU 116 2.001 -6.864 21.232 1.00 0.00 C ATOM 915 CG LEU 116 1.642 -8.342 21.014 1.00 0.00 C ATOM 916 CD1 LEU 116 1.124 -8.576 19.587 1.00 0.00 C ATOM 917 CD2 LEU 116 2.822 -9.260 21.371 1.00 0.00 C ATOM 918 C LEU 116 3.043 -5.151 22.603 1.00 0.00 C ATOM 919 O LEU 116 4.244 -4.922 22.483 1.00 0.00 O ATOM 920 N LEU 117 2.131 -4.173 22.717 1.00 0.00 N ATOM 921 CA LEU 117 2.490 -2.792 22.606 1.00 0.00 C ATOM 922 CB LEU 117 1.246 -1.888 22.694 1.00 0.00 C ATOM 923 CG LEU 117 1.487 -0.408 22.353 1.00 0.00 C ATOM 924 CD1 LEU 117 1.910 -0.239 20.885 1.00 0.00 C ATOM 925 CD2 LEU 117 0.255 0.444 22.693 1.00 0.00 C ATOM 926 C LEU 117 3.427 -2.443 23.721 1.00 0.00 C ATOM 927 O LEU 117 4.445 -1.788 23.502 1.00 0.00 O ATOM 928 N ILE 118 3.120 -2.894 24.952 1.00 0.00 N ATOM 929 CA ILE 118 3.949 -2.571 26.079 1.00 0.00 C ATOM 930 CB ILE 118 3.360 -2.985 27.401 1.00 0.00 C ATOM 931 CG2 ILE 118 2.126 -2.114 27.662 1.00 0.00 C ATOM 932 CG1 ILE 118 3.085 -4.494 27.463 1.00 0.00 C ATOM 933 CD1 ILE 118 2.643 -4.966 28.849 1.00 0.00 C ATOM 934 C ILE 118 5.302 -3.184 25.910 1.00 0.00 C ATOM 935 O ILE 118 6.314 -2.541 26.188 1.00 0.00 O ATOM 936 N LYS 119 5.365 -4.439 25.434 1.00 0.00 N ATOM 937 CA LYS 119 6.637 -5.085 25.286 1.00 0.00 C ATOM 938 CB LYS 119 6.550 -6.513 24.727 1.00 0.00 C ATOM 939 CG LYS 119 6.026 -7.552 25.716 1.00 0.00 C ATOM 940 CD LYS 119 5.718 -8.899 25.061 1.00 0.00 C ATOM 941 CE LYS 119 6.959 -9.622 24.533 1.00 0.00 C ATOM 942 NZ LYS 119 6.571 -10.916 23.930 1.00 0.00 N ATOM 943 C LYS 119 7.453 -4.307 24.313 1.00 0.00 C ATOM 944 O LYS 119 8.655 -4.129 24.500 1.00 0.00 O ATOM 945 N ARG 120 6.813 -3.813 23.242 1.00 0.00 N ATOM 946 CA ARG 120 7.525 -3.122 22.213 1.00 0.00 C ATOM 947 CB ARG 120 6.579 -2.665 21.092 1.00 0.00 C ATOM 948 CG ARG 120 7.275 -2.122 19.848 1.00 0.00 C ATOM 949 CD ARG 120 6.290 -1.821 18.720 1.00 0.00 C ATOM 950 NE ARG 120 5.624 -3.107 18.378 1.00 0.00 N ATOM 951 CZ ARG 120 4.425 -3.107 17.727 1.00 0.00 C ATOM 952 NH1 ARG 120 3.836 -1.927 17.378 1.00 0.00 H ATOM 953 NH2 ARG 120 3.815 -4.290 17.424 1.00 0.00 H ATOM 954 C ARG 120 8.176 -1.916 22.812 1.00 0.00 C ATOM 955 O ARG 120 9.337 -1.625 22.531 1.00 0.00 O ATOM 956 N SER 121 7.443 -1.189 23.673 1.00 0.00 N ATOM 957 CA SER 121 7.974 0.011 24.248 1.00 0.00 C ATOM 958 CB SER 121 6.964 0.730 25.158 1.00 0.00 C ATOM 959 OG SER 121 5.850 1.171 24.395 1.00 0.00 O ATOM 960 C SER 121 9.179 -0.300 25.079 1.00 0.00 C ATOM 961 O SER 121 10.255 0.251 24.850 1.00 0.00 O ATOM 962 N ARG 122 9.040 -1.210 26.064 1.00 0.00 N ATOM 963 CA ARG 122 10.136 -1.481 26.951 1.00 0.00 C ATOM 964 CB ARG 122 9.787 -2.360 28.168 1.00 0.00 C ATOM 965 CG ARG 122 9.308 -3.776 27.854 1.00 0.00 C ATOM 966 CD ARG 122 9.204 -4.653 29.104 1.00 0.00 C ATOM 967 NE ARG 122 8.351 -3.923 30.080 1.00 0.00 N ATOM 968 CZ ARG 122 6.993 -4.022 29.988 1.00 0.00 C ATOM 969 NH1 ARG 122 6.438 -4.800 29.014 1.00 0.00 H ATOM 970 NH2 ARG 122 6.195 -3.345 30.864 1.00 0.00 H ATOM 971 C ARG 122 11.246 -2.143 26.205 1.00 0.00 C ATOM 972 O ARG 122 12.421 -1.918 26.488 1.00 0.00 O ATOM 973 N ASN 123 10.891 -2.970 25.212 1.00 0.00 N ATOM 974 CA ASN 123 11.849 -3.739 24.482 1.00 0.00 C ATOM 975 CB ASN 123 11.187 -4.551 23.358 1.00 0.00 C ATOM 976 CG ASN 123 12.146 -5.647 22.939 1.00 0.00 C ATOM 977 OD1 ASN 123 13.333 -5.406 22.726 1.00 0.00 O ATOM 978 ND2 ASN 123 11.619 -6.896 22.829 1.00 0.00 N ATOM 979 C ASN 123 12.830 -2.800 23.862 1.00 0.00 C ATOM 980 O ASN 123 14.030 -3.069 23.862 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 313 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 18.61 93.4 76 100.0 76 ARMSMC SECONDARY STRUCTURE . . 5.10 100.0 64 100.0 64 ARMSMC SURFACE . . . . . . . . 19.09 93.1 72 100.0 72 ARMSMC BURIED . . . . . . . . 4.22 100.0 4 100.0 4 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 75.38 58.8 34 100.0 34 ARMSSC1 RELIABLE SIDE CHAINS . 75.38 58.8 34 100.0 34 ARMSSC1 SECONDARY STRUCTURE . . 69.31 64.3 28 100.0 28 ARMSSC1 SURFACE . . . . . . . . 75.38 58.8 34 100.0 34 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 59.99 70.0 30 100.0 30 ARMSSC2 RELIABLE SIDE CHAINS . 63.41 65.2 23 100.0 23 ARMSSC2 SECONDARY STRUCTURE . . 64.61 66.7 24 100.0 24 ARMSSC2 SURFACE . . . . . . . . 59.99 70.0 30 100.0 30 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 81.69 28.6 14 100.0 14 ARMSSC3 RELIABLE SIDE CHAINS . 78.32 33.3 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 77.33 30.8 13 100.0 13 ARMSSC3 SURFACE . . . . . . . . 81.69 28.6 14 100.0 14 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 88.17 28.6 7 100.0 7 ARMSSC4 RELIABLE SIDE CHAINS . 88.17 28.6 7 100.0 7 ARMSSC4 SECONDARY STRUCTURE . . 86.90 33.3 6 100.0 6 ARMSSC4 SURFACE . . . . . . . . 88.17 28.6 7 100.0 7 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 1.50 (Number of atoms: 39) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 1.50 39 100.0 39 CRMSCA CRN = ALL/NP . . . . . 0.0384 CRMSCA SECONDARY STRUCTURE . . 1.54 32 100.0 32 CRMSCA SURFACE . . . . . . . . 1.53 37 100.0 37 CRMSCA BURIED . . . . . . . . 0.87 2 100.0 2 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 1.57 194 100.0 194 CRMSMC SECONDARY STRUCTURE . . 1.53 160 100.0 160 CRMSMC SURFACE . . . . . . . . 1.60 184 100.0 184 CRMSMC BURIED . . . . . . . . 0.89 10 100.0 10 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 3.49 157 100.0 157 CRMSSC RELIABLE SIDE CHAINS . 3.45 139 100.0 139 CRMSSC SECONDARY STRUCTURE . . 3.64 130 100.0 130 CRMSSC SURFACE . . . . . . . . 3.51 155 100.0 155 CRMSSC BURIED . . . . . . . . 1.38 2 100.0 2 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 2.67 313 100.0 313 CRMSALL SECONDARY STRUCTURE . . 2.76 258 100.0 258 CRMSALL SURFACE . . . . . . . . 2.71 303 100.0 303 CRMSALL BURIED . . . . . . . . 0.89 10 100.0 10 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.417 1.000 0.500 39 100.0 39 ERRCA SECONDARY STRUCTURE . . 1.460 1.000 0.500 32 100.0 32 ERRCA SURFACE . . . . . . . . 1.451 1.000 0.500 37 100.0 37 ERRCA BURIED . . . . . . . . 0.788 1.000 0.500 2 100.0 2 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.424 1.000 0.500 194 100.0 194 ERRMC SECONDARY STRUCTURE . . 1.413 1.000 0.500 160 100.0 160 ERRMC SURFACE . . . . . . . . 1.459 1.000 0.500 184 100.0 184 ERRMC BURIED . . . . . . . . 0.788 1.000 0.500 10 100.0 10 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.055 1.000 0.500 157 100.0 157 ERRSC RELIABLE SIDE CHAINS . 3.030 1.000 0.500 139 100.0 139 ERRSC SECONDARY STRUCTURE . . 3.193 1.000 0.500 130 100.0 130 ERRSC SURFACE . . . . . . . . 3.078 1.000 0.500 155 100.0 155 ERRSC BURIED . . . . . . . . 1.269 1.000 0.500 2 100.0 2 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.180 1.000 0.500 313 100.0 313 ERRALL SECONDARY STRUCTURE . . 2.239 1.000 0.500 258 100.0 258 ERRALL SURFACE . . . . . . . . 2.226 1.000 0.500 303 100.0 303 ERRALL BURIED . . . . . . . . 0.788 1.000 0.500 10 100.0 10 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 9 32 39 39 39 39 39 DISTCA CA (P) 23.08 82.05 100.00 100.00 100.00 39 DISTCA CA (RMS) 0.74 1.34 1.50 1.50 1.50 DISTCA ALL (N) 57 185 248 293 313 313 313 DISTALL ALL (P) 18.21 59.11 79.23 93.61 100.00 313 DISTALL ALL (RMS) 0.72 1.33 1.69 2.13 2.67 DISTALL END of the results output