####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 80 ( 394), selected 80 , name T0586TS373_1-D1 # Molecule2: number of CA atoms 80 ( 640), selected 80 , name T0586-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0586TS373_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 42 26 - 67 4.91 18.45 LCS_AVERAGE: 42.31 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 28 38 - 65 1.85 20.35 LONGEST_CONTINUOUS_SEGMENT: 28 39 - 66 1.84 20.26 LCS_AVERAGE: 24.95 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 45 - 65 0.98 20.31 LCS_AVERAGE: 16.08 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 80 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT N 5 N 5 3 3 12 0 3 3 3 3 4 4 5 6 9 12 12 13 14 15 16 18 19 21 26 LCS_GDT P 6 P 6 3 3 12 0 3 3 3 3 4 5 7 8 9 10 12 13 14 15 16 18 19 22 28 LCS_GDT T 7 T 7 3 3 31 1 3 3 4 4 4 6 7 8 10 12 12 14 18 21 24 27 28 32 36 LCS_GDT F 8 F 8 3 3 31 0 3 3 4 4 4 6 7 8 10 12 18 21 23 28 30 31 32 34 36 LCS_GDT H 9 H 9 4 5 31 3 4 4 5 6 6 6 8 12 17 18 24 26 28 29 31 31 34 35 36 LCS_GDT A 10 A 10 4 5 31 3 4 5 10 13 20 21 24 24 26 28 29 31 31 32 33 33 34 35 36 LCS_GDT D 11 D 11 4 5 31 3 4 4 6 11 16 18 21 24 26 28 29 31 31 32 33 33 34 35 36 LCS_GDT K 12 K 12 4 18 31 3 4 4 6 9 16 18 21 24 26 28 29 31 31 32 33 33 34 35 36 LCS_GDT P 13 P 13 17 24 31 9 15 16 20 22 23 23 24 24 26 28 29 31 31 32 33 33 34 35 36 LCS_GDT I 14 I 14 17 24 31 9 15 18 20 22 23 23 24 24 26 28 29 31 31 32 33 33 34 35 36 LCS_GDT Y 15 Y 15 17 24 31 9 15 18 20 22 23 23 24 24 26 28 29 31 31 32 33 33 34 35 36 LCS_GDT S 16 S 16 17 24 31 9 15 18 20 22 23 23 24 24 26 28 29 31 31 32 33 33 34 35 36 LCS_GDT Q 17 Q 17 17 24 31 9 15 18 20 22 23 23 24 24 26 28 29 31 31 32 33 33 34 35 36 LCS_GDT I 18 I 18 17 24 31 9 15 18 20 22 23 23 24 24 26 28 29 31 31 32 33 33 34 35 36 LCS_GDT S 19 S 19 17 24 31 9 15 18 20 22 23 23 24 24 26 28 29 31 31 32 33 33 34 36 39 LCS_GDT D 20 D 20 17 24 31 9 15 18 20 22 23 23 24 24 26 28 29 31 31 32 33 33 34 35 39 LCS_GDT W 21 W 21 17 24 31 8 15 18 20 22 23 23 24 24 26 28 29 31 31 32 33 33 34 35 39 LCS_GDT M 22 M 22 17 24 31 8 15 18 20 22 23 23 24 24 26 28 29 31 31 32 33 35 39 43 48 LCS_GDT K 23 K 23 17 24 31 7 15 18 20 22 23 23 24 24 26 28 29 31 31 32 34 38 41 45 48 LCS_GDT K 24 K 24 17 24 31 8 15 18 20 22 23 23 24 24 26 28 29 31 31 32 34 36 39 43 48 LCS_GDT Q 25 Q 25 17 24 31 8 15 18 20 22 23 23 24 24 26 28 29 31 32 36 43 45 47 48 50 LCS_GDT M 26 M 26 17 24 42 7 15 18 20 22 23 23 24 24 26 28 36 38 40 43 45 46 47 48 50 LCS_GDT I 27 I 27 17 24 42 9 15 18 20 22 23 23 24 24 26 28 29 31 33 37 43 45 47 48 50 LCS_GDT T 28 T 28 17 24 42 5 12 18 20 22 23 23 24 24 26 28 31 38 39 43 45 46 47 48 50 LCS_GDT G 29 G 29 17 24 42 5 12 18 20 22 23 23 24 24 27 33 37 40 42 43 45 46 47 48 50 LCS_GDT E 30 E 30 15 24 42 4 7 16 20 22 23 23 24 27 32 34 39 40 42 43 45 46 47 48 50 LCS_GDT W 31 W 31 15 24 42 5 12 18 20 22 23 23 27 30 32 36 39 40 42 43 45 46 47 48 50 LCS_GDT K 32 K 32 15 24 42 4 8 16 20 22 23 23 27 30 32 34 39 40 42 43 45 46 47 48 50 LCS_GDT G 33 G 33 9 24 42 4 6 11 12 17 22 22 24 25 30 34 39 40 42 43 45 46 47 48 50 LCS_GDT E 34 E 34 5 24 42 5 12 18 20 22 23 23 24 24 30 34 39 40 42 43 45 46 47 48 50 LCS_GDT D 35 D 35 5 24 42 3 5 13 18 22 23 27 29 30 34 37 39 40 42 43 45 46 47 48 50 LCS_GDT K 36 K 36 3 24 42 1 3 13 18 22 23 25 26 29 34 37 39 40 42 43 45 46 47 48 50 LCS_GDT L 37 L 37 3 3 42 0 3 3 5 12 23 27 29 31 34 37 39 40 42 43 45 46 47 48 50 LCS_GDT P 38 P 38 3 28 42 3 12 17 20 26 26 27 29 31 34 37 39 40 42 43 45 46 47 48 50 LCS_GDT S 39 S 39 12 28 42 9 11 15 22 24 26 27 29 29 31 35 37 38 40 42 44 46 47 48 49 LCS_GDT V 40 V 40 12 28 42 9 11 12 15 24 26 27 29 29 34 37 39 40 42 43 45 46 47 48 50 LCS_GDT R 41 R 41 13 28 42 9 11 12 19 24 26 27 29 31 34 37 39 40 42 43 45 46 47 48 50 LCS_GDT E 42 E 42 13 28 42 9 11 19 23 24 26 27 29 31 34 37 39 40 42 43 45 46 47 48 50 LCS_GDT M 43 M 43 17 28 42 9 11 19 23 24 26 27 29 31 34 37 39 40 42 43 45 46 47 48 50 LCS_GDT G 44 G 44 19 28 42 9 11 20 23 26 26 27 29 31 34 37 39 40 42 43 45 46 47 48 50 LCS_GDT V 45 V 45 21 28 42 9 11 20 23 26 26 27 29 31 34 37 39 40 42 43 45 46 47 48 50 LCS_GDT K 46 K 46 21 28 42 9 17 20 23 26 26 27 29 31 34 37 39 40 42 43 45 46 47 48 50 LCS_GDT L 47 L 47 21 28 42 9 17 20 23 26 26 27 29 31 34 37 39 40 42 43 45 46 47 48 50 LCS_GDT A 48 A 48 21 28 42 12 17 20 23 26 26 27 29 31 34 37 39 40 42 43 45 46 47 48 50 LCS_GDT V 49 V 49 21 28 42 12 17 20 23 26 26 27 29 31 34 37 39 40 42 43 45 46 47 48 50 LCS_GDT N 50 N 50 21 28 42 12 17 20 23 26 26 27 29 31 34 37 39 40 42 43 45 46 47 48 50 LCS_GDT P 51 P 51 21 28 42 12 17 20 23 26 26 27 29 31 34 37 39 40 42 43 45 46 47 48 50 LCS_GDT N 52 N 52 21 28 42 12 17 20 23 26 26 27 29 31 34 37 39 40 42 43 45 46 47 48 50 LCS_GDT T 53 T 53 21 28 42 12 17 20 23 26 26 27 29 31 34 37 39 40 42 43 45 46 47 48 50 LCS_GDT V 54 V 54 21 28 42 12 17 20 23 26 26 27 29 31 34 37 39 40 42 43 45 46 47 48 50 LCS_GDT S 55 S 55 21 28 42 12 17 20 23 26 26 27 29 31 34 37 39 40 42 43 45 46 47 48 50 LCS_GDT R 56 R 56 21 28 42 12 17 20 23 26 26 27 29 31 34 37 39 40 42 43 45 46 47 48 50 LCS_GDT A 57 A 57 21 28 42 12 17 20 23 26 26 27 29 31 34 37 39 40 42 43 45 46 47 48 50 LCS_GDT Y 58 Y 58 21 28 42 8 17 20 23 26 26 27 29 31 34 37 39 40 42 43 45 46 47 48 50 LCS_GDT Q 59 Q 59 21 28 42 8 17 20 23 26 26 27 29 31 34 37 39 40 42 43 45 46 47 48 50 LCS_GDT E 60 E 60 21 28 42 8 16 20 23 26 26 27 29 31 34 37 39 40 42 43 45 46 47 48 50 LCS_GDT L 61 L 61 21 28 42 12 17 20 23 26 26 27 29 31 34 37 39 40 42 43 45 46 47 48 50 LCS_GDT E 62 E 62 21 28 42 8 17 20 23 26 26 27 29 31 34 37 39 40 42 43 45 46 47 48 50 LCS_GDT R 63 R 63 21 28 42 6 12 18 23 26 26 27 29 31 34 37 39 40 42 43 45 46 47 48 50 LCS_GDT A 64 A 64 21 28 42 6 12 17 21 26 26 27 29 31 34 37 39 40 42 43 45 46 47 48 50 LCS_GDT G 65 G 65 21 28 42 12 17 20 23 26 26 27 29 31 34 37 39 40 42 43 45 46 47 48 50 LCS_GDT Y 66 Y 66 17 28 42 5 9 16 20 26 26 27 29 31 34 37 39 40 42 43 45 46 47 48 50 LCS_GDT I 67 I 67 5 27 42 3 4 5 5 6 9 17 20 28 33 37 38 40 42 43 45 46 47 48 50 LCS_GDT Y 68 Y 68 5 6 41 3 4 5 5 7 10 15 29 29 33 36 38 40 42 43 45 46 47 48 50 LCS_GDT A 69 A 69 5 6 41 3 4 5 5 6 7 9 11 16 22 25 27 29 30 35 40 42 45 47 50 LCS_GDT K 70 K 70 5 6 37 3 4 5 5 6 9 10 11 14 14 17 23 27 29 30 37 42 45 45 48 LCS_GDT R 71 R 71 5 9 17 3 4 5 6 8 9 10 10 13 14 16 18 21 24 26 30 31 33 35 38 LCS_GDT G 72 G 72 5 9 17 3 4 5 7 8 9 10 10 13 14 16 18 21 24 26 30 31 33 34 36 LCS_GDT M 73 M 73 5 9 17 3 4 5 7 8 9 10 10 13 14 16 18 21 24 26 30 31 33 34 36 LCS_GDT G 74 G 74 5 9 16 4 4 5 7 8 9 10 10 11 14 16 18 19 23 25 30 31 33 34 36 LCS_GDT S 75 S 75 5 9 15 4 4 5 7 8 9 10 10 12 14 15 16 18 23 24 29 31 33 33 34 LCS_GDT F 76 F 76 4 9 15 4 4 5 7 8 9 10 10 11 12 15 18 19 24 26 30 31 33 34 36 LCS_GDT V 77 V 77 4 9 15 4 4 4 7 8 9 10 10 11 12 15 18 19 24 26 30 31 33 34 36 LCS_GDT T 78 T 78 6 9 15 3 5 6 7 8 9 10 10 11 12 12 15 16 20 24 30 31 33 34 37 LCS_GDT S 79 S 79 6 9 15 4 5 6 7 8 9 10 10 11 13 16 18 21 28 41 42 43 45 48 50 LCS_GDT D 80 D 80 6 7 15 4 5 6 7 8 8 11 18 27 33 37 38 40 42 43 45 46 47 48 50 LCS_GDT K 81 K 81 6 7 15 4 5 6 19 26 26 27 29 31 34 37 39 40 42 43 45 46 47 48 50 LCS_GDT A 82 A 82 6 7 15 4 5 6 14 16 23 24 28 30 33 37 38 40 42 43 45 46 47 48 50 LCS_GDT L 83 L 83 6 7 13 4 5 6 7 26 26 27 29 31 34 37 39 40 42 43 45 46 47 48 50 LCS_GDT F 84 F 84 6 7 12 4 4 9 13 20 26 27 29 31 34 37 39 40 42 43 45 46 47 48 50 LCS_AVERAGE LCS_A: 27.78 ( 16.08 24.95 42.31 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 12 17 20 23 26 26 27 29 31 34 37 39 40 42 43 45 46 47 48 50 GDT PERCENT_AT 15.00 21.25 25.00 28.75 32.50 32.50 33.75 36.25 38.75 42.50 46.25 48.75 50.00 52.50 53.75 56.25 57.50 58.75 60.00 62.50 GDT RMS_LOCAL 0.35 0.63 0.88 1.19 1.70 1.48 1.59 2.15 2.41 2.82 3.10 3.73 3.73 4.14 4.16 4.60 4.71 4.98 5.40 5.93 GDT RMS_ALL_AT 20.13 20.21 20.16 20.39 19.61 20.56 20.61 19.48 19.34 19.29 19.29 19.06 19.21 19.07 19.12 18.97 18.93 18.86 18.68 18.69 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA N 5 N 5 45.348 3 0.613 0.576 46.943 0.000 0.000 LGA P 6 P 6 44.915 2 0.653 0.614 45.587 0.000 0.000 LGA T 7 T 7 44.846 2 0.646 0.588 45.990 0.000 0.000 LGA F 8 F 8 40.196 6 0.643 0.581 42.399 0.000 0.000 LGA H 9 H 9 41.841 5 0.634 0.600 42.966 0.000 0.000 LGA A 10 A 10 42.975 0 0.114 0.130 45.449 0.000 0.000 LGA D 11 D 11 37.029 3 0.053 0.070 39.093 0.000 0.000 LGA K 12 K 12 32.492 4 0.621 0.587 34.488 0.000 0.000 LGA P 13 P 13 34.411 2 0.624 0.594 34.823 0.000 0.000 LGA I 14 I 14 34.000 3 0.024 0.050 35.143 0.000 0.000 LGA Y 15 Y 15 27.414 7 0.028 0.062 29.992 0.000 0.000 LGA S 16 S 16 26.764 1 0.024 0.037 28.483 0.000 0.000 LGA Q 17 Q 17 29.903 4 0.031 0.049 32.075 0.000 0.000 LGA I 18 I 18 25.410 3 0.023 0.047 27.155 0.000 0.000 LGA S 19 S 19 20.763 1 0.037 0.068 22.657 0.000 0.000 LGA D 20 D 20 24.363 3 0.022 0.032 26.839 0.000 0.000 LGA W 21 W 21 23.567 9 0.017 0.052 24.396 0.000 0.000 LGA M 22 M 22 17.538 3 0.016 0.027 19.901 0.000 0.000 LGA K 23 K 23 17.909 4 0.022 0.037 19.588 0.000 0.000 LGA K 24 K 24 20.787 4 0.034 0.067 22.493 0.000 0.000 LGA Q 25 Q 25 16.031 4 0.061 0.094 17.823 0.000 0.000 LGA M 26 M 26 12.595 3 0.055 0.067 13.897 0.000 0.000 LGA I 27 I 27 17.226 3 0.079 0.112 18.993 0.000 0.000 LGA T 28 T 28 16.289 2 0.058 0.087 16.556 0.000 0.000 LGA G 29 G 29 12.835 0 0.048 0.048 13.981 0.000 0.000 LGA E 30 E 30 10.224 4 0.054 0.053 11.455 3.214 1.429 LGA W 31 W 31 7.444 9 0.086 0.098 8.745 5.714 1.973 LGA K 32 K 32 7.800 4 0.127 0.177 8.533 13.810 6.455 LGA G 33 G 33 8.070 0 0.594 0.594 9.800 3.690 3.690 LGA E 34 E 34 7.628 4 0.112 0.134 8.601 10.119 4.815 LGA D 35 D 35 4.322 3 0.641 0.575 5.563 39.643 25.238 LGA K 36 K 36 5.591 4 0.624 0.568 7.941 23.095 11.058 LGA L 37 L 37 3.984 3 0.603 0.572 3.984 46.786 28.810 LGA P 38 P 38 1.968 2 0.662 0.621 4.101 57.738 38.299 LGA S 39 S 39 7.587 1 0.616 0.598 10.268 12.976 8.651 LGA V 40 V 40 6.418 2 0.047 0.074 6.995 19.524 13.605 LGA R 41 R 41 5.818 6 0.028 0.053 6.638 24.048 9.957 LGA E 42 E 42 5.798 4 0.013 0.040 6.624 25.119 12.646 LGA M 43 M 43 4.836 3 0.030 0.061 5.241 36.071 21.964 LGA G 44 G 44 2.980 0 0.035 0.035 3.777 57.619 57.619 LGA V 45 V 45 2.479 2 0.020 0.040 3.435 67.024 45.442 LGA K 46 K 46 3.076 4 0.040 0.054 4.114 53.571 27.937 LGA L 47 L 47 2.565 3 0.160 0.175 2.638 62.976 38.631 LGA A 48 A 48 0.634 0 0.055 0.064 1.830 83.810 83.333 LGA V 49 V 49 0.750 2 0.041 0.054 0.872 92.857 65.986 LGA N 50 N 50 1.418 3 0.038 0.048 1.969 81.429 49.821 LGA P 51 P 51 1.804 2 0.056 0.055 2.004 72.857 50.884 LGA N 52 N 52 2.540 3 0.038 0.061 2.829 62.857 38.571 LGA T 53 T 53 1.909 2 0.016 0.040 2.053 70.833 50.884 LGA V 54 V 54 1.060 2 0.026 0.037 1.325 83.690 60.748 LGA S 55 S 55 1.572 1 0.020 0.042 1.719 75.000 62.143 LGA R 56 R 56 1.868 6 0.041 0.052 2.129 72.857 32.381 LGA A 57 A 57 1.248 0 0.017 0.052 1.557 85.952 83.333 LGA Y 58 Y 58 0.518 7 0.014 0.033 0.740 95.238 39.286 LGA Q 59 Q 59 0.330 4 0.026 0.051 0.439 100.000 55.556 LGA E 60 E 60 0.595 4 0.022 0.030 0.978 92.857 51.323 LGA L 61 L 61 0.779 3 0.057 0.086 1.256 88.214 55.417 LGA E 62 E 62 1.255 4 0.018 0.046 1.936 79.405 43.386 LGA R 63 R 63 2.240 6 0.027 0.037 2.751 64.881 29.481 LGA A 64 A 64 2.321 0 0.199 0.213 2.321 68.810 68.000 LGA G 65 G 65 1.657 0 0.479 0.479 2.856 71.071 71.071 LGA Y 66 Y 66 0.946 7 0.586 0.528 3.114 76.310 29.603 LGA I 67 I 67 6.042 3 0.625 0.620 7.321 19.405 10.952 LGA Y 68 Y 68 8.514 7 0.196 0.274 11.792 3.214 2.183 LGA A 69 A 69 15.712 0 0.184 0.236 17.282 0.000 0.000 LGA K 70 K 70 20.130 4 0.150 0.194 22.529 0.000 0.000 LGA R 71 R 71 26.241 6 0.044 0.041 29.443 0.000 0.000 LGA G 72 G 72 32.238 0 0.098 0.098 35.449 0.000 0.000 LGA M 73 M 73 32.420 3 0.606 0.548 32.420 0.000 0.000 LGA G 74 G 74 32.741 0 0.510 0.510 32.741 0.000 0.000 LGA S 75 S 75 27.418 1 0.069 0.097 29.231 0.000 0.000 LGA F 76 F 76 24.757 6 0.138 0.183 25.913 0.000 0.000 LGA V 77 V 77 19.071 2 0.022 0.035 21.152 0.000 0.000 LGA T 78 T 78 16.239 2 0.057 0.093 17.355 0.000 0.000 LGA S 79 S 79 11.109 1 0.370 0.363 12.985 0.476 0.317 LGA D 80 D 80 6.790 3 0.038 0.055 8.261 23.095 12.440 LGA K 81 K 81 1.903 4 0.172 0.166 3.345 59.405 33.598 LGA A 82 A 82 4.501 0 0.088 0.091 6.224 42.024 37.048 LGA L 83 L 83 2.744 3 0.041 0.056 3.931 63.214 37.024 LGA F 84 F 84 3.368 6 0.061 0.094 5.069 46.071 20.130 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 80 320 320 100.00 640 394 61.56 80 SUMMARY(RMSD_GDC): 15.043 15.025 14.981 29.232 19.164 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 80 80 4.0 29 2.15 35.625 33.651 1.290 LGA_LOCAL RMSD: 2.149 Number of atoms: 29 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 19.477 Number of assigned atoms: 80 Std_ASGN_ATOMS RMSD: 15.043 Standard rmsd on all 80 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.842003 * X + -0.301268 * Y + 0.447513 * Z + 2.275964 Y_new = -0.248844 * X + 0.519117 * Y + 0.817676 * Z + 20.864491 Z_new = -0.478651 * X + -0.799847 * Y + 0.362129 * Z + 5.039077 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.287358 0.499118 -1.145659 [DEG: -16.4644 28.5973 -65.6414 ] ZXZ: 2.640826 1.200245 -2.602329 [DEG: 151.3082 68.7690 -149.1025 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0586TS373_1-D1 REMARK 2: T0586-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0586TS373_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 80 80 4.0 29 2.15 33.651 15.04 REMARK ---------------------------------------------------------- MOLECULE T0586TS373_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0586 REMARK MODEL 1 REMARK PARENT N/A ATOM 5 N ASN 5 -23.514 28.824 17.310 1.00 0.00 N ATOM 5 CA ASN 5 -22.727 29.244 16.141 1.00 0.00 C ATOM 5 C ASN 5 -21.903 30.467 16.553 1.00 0.00 C ATOM 5 O ASN 5 -20.772 30.679 16.098 1.00 0.00 O ATOM 5 CB ASN 5 -23.651 29.669 14.984 1.00 0.00 C ATOM 6 N PRO 6 -22.508 31.254 17.423 1.00 0.00 N ATOM 6 CA PRO 6 -21.897 32.484 17.952 1.00 0.00 C ATOM 6 C PRO 6 -20.629 32.106 18.725 1.00 0.00 C ATOM 6 O PRO 6 -19.688 32.899 18.868 1.00 0.00 O ATOM 6 CB PRO 6 -22.871 33.163 18.930 1.00 0.00 C ATOM 7 N THR 7 -20.640 30.880 19.211 1.00 0.00 N ATOM 7 CA THR 7 -19.526 30.313 19.985 1.00 0.00 C ATOM 7 C THR 7 -18.509 29.709 19.012 1.00 0.00 C ATOM 7 O THR 7 -17.309 29.604 19.298 1.00 0.00 O ATOM 7 CB THR 7 -20.061 29.198 20.900 1.00 0.00 C ATOM 8 N PHE 8 -19.029 29.319 17.863 1.00 0.00 N ATOM 8 CA PHE 8 -18.232 28.712 16.785 1.00 0.00 C ATOM 8 C PHE 8 -17.374 29.808 16.147 1.00 0.00 C ATOM 8 O PHE 8 -16.427 29.546 15.395 1.00 0.00 O ATOM 8 CB PHE 8 -19.178 28.158 15.707 1.00 0.00 C ATOM 9 N HIS 9 -17.739 31.035 16.473 1.00 0.00 N ATOM 9 CA HIS 9 -17.052 32.236 15.972 1.00 0.00 C ATOM 9 C HIS 9 -15.811 32.498 16.830 1.00 0.00 C ATOM 9 O HIS 9 -14.820 33.095 16.386 1.00 0.00 O ATOM 9 CB HIS 9 -17.994 33.441 16.142 1.00 0.00 C ATOM 10 N ALA 10 -15.901 32.034 18.063 1.00 0.00 N ATOM 10 CA ALA 10 -14.825 32.177 19.055 1.00 0.00 C ATOM 10 C ALA 10 -13.808 31.049 18.859 1.00 0.00 C ATOM 10 O ALA 10 -12.639 31.143 19.256 1.00 0.00 O ATOM 10 CB ALA 10 -15.454 32.039 20.452 1.00 0.00 C ATOM 11 N ASP 11 -14.293 29.989 18.239 1.00 0.00 N ATOM 11 CA ASP 11 -13.490 28.792 17.947 1.00 0.00 C ATOM 11 C ASP 11 -12.635 29.042 16.701 1.00 0.00 C ATOM 11 O ASP 11 -11.537 28.492 16.539 1.00 0.00 O ATOM 11 CB ASP 11 -14.444 27.632 17.613 1.00 0.00 C ATOM 12 N LYS 12 -13.174 29.883 15.839 1.00 0.00 N ATOM 12 CA LYS 12 -12.522 30.264 14.576 1.00 0.00 C ATOM 12 C LYS 12 -11.401 31.257 14.890 1.00 0.00 C ATOM 12 O LYS 12 -10.335 31.265 14.258 1.00 0.00 O ATOM 12 CB LYS 12 -13.547 30.976 13.675 1.00 0.00 C ATOM 13 N PRO 13 -11.677 32.085 15.880 1.00 0.00 N ATOM 13 CA PRO 13 -10.741 33.118 16.346 1.00 0.00 C ATOM 13 C PRO 13 -9.507 32.431 16.938 1.00 0.00 C ATOM 13 O PRO 13 -8.366 32.892 16.790 1.00 0.00 O ATOM 13 CB PRO 13 -11.420 33.926 17.467 1.00 0.00 C ATOM 14 N ILE 14 -9.775 31.326 17.607 1.00 0.00 N ATOM 14 CA ILE 14 -8.739 30.510 18.256 1.00 0.00 C ATOM 14 C ILE 14 -7.747 30.027 17.196 1.00 0.00 C ATOM 14 O ILE 14 -6.522 30.028 17.393 1.00 0.00 O ATOM 14 CB ILE 14 -9.417 29.253 18.836 1.00 0.00 C ATOM 15 N TYR 15 -8.315 29.619 16.077 1.00 0.00 N ATOM 15 CA TYR 15 -7.549 29.115 14.928 1.00 0.00 C ATOM 15 C TYR 15 -6.596 30.222 14.469 1.00 0.00 C ATOM 15 O TYR 15 -5.434 29.984 14.115 1.00 0.00 O ATOM 15 CB TYR 15 -8.539 28.835 13.779 1.00 0.00 C ATOM 16 N SER 16 -7.129 31.430 14.488 1.00 0.00 N ATOM 16 CA SER 16 -6.392 32.636 14.086 1.00 0.00 C ATOM 16 C SER 16 -5.154 32.775 14.974 1.00 0.00 C ATOM 16 O SER 16 -4.053 33.114 14.516 1.00 0.00 O ATOM 16 CB SER 16 -7.298 33.852 14.384 1.00 0.00 C ATOM 17 N GLN 17 -5.375 32.504 16.247 1.00 0.00 N ATOM 17 CA GLN 17 -4.326 32.575 17.272 1.00 0.00 C ATOM 17 C GLN 17 -3.215 31.590 16.899 1.00 0.00 C ATOM 17 O GLN 17 -2.016 31.869 17.039 1.00 0.00 O ATOM 17 CB GLN 17 -4.932 32.110 18.613 1.00 0.00 C ATOM 18 N ILE 18 -3.654 30.439 16.424 1.00 0.00 N ATOM 18 CA ILE 18 -2.759 29.351 16.004 1.00 0.00 C ATOM 18 C ILE 18 -1.837 29.877 14.902 1.00 0.00 C ATOM 18 O ILE 18 -0.632 29.593 14.861 1.00 0.00 O ATOM 18 CB ILE 18 -3.628 28.258 15.345 1.00 0.00 C ATOM 19 N SER 19 -2.443 30.647 14.019 1.00 0.00 N ATOM 19 CA SER 19 -1.748 31.259 12.877 1.00 0.00 C ATOM 19 C SER 19 -0.637 32.153 13.428 1.00 0.00 C ATOM 19 O SER 19 0.493 32.188 12.917 1.00 0.00 O ATOM 19 CB SER 19 -2.777 32.164 12.163 1.00 0.00 C ATOM 20 N ASP 20 -0.995 32.868 14.478 1.00 0.00 N ATOM 20 CA ASP 20 -0.085 33.794 15.163 1.00 0.00 C ATOM 20 C ASP 20 1.117 33.011 15.700 1.00 0.00 C ATOM 20 O ASP 20 2.275 33.440 15.608 1.00 0.00 O ATOM 20 CB ASP 20 -0.837 34.411 16.362 1.00 0.00 C ATOM 21 N TRP 21 0.801 31.857 16.260 1.00 0.00 N ATOM 21 CA TRP 21 1.800 30.947 16.839 1.00 0.00 C ATOM 21 C TRP 21 2.801 30.503 15.770 1.00 0.00 C ATOM 21 O TRP 21 4.022 30.483 15.981 1.00 0.00 O ATOM 21 CB TRP 21 1.057 29.664 17.273 1.00 0.00 C ATOM 22 N MET 22 2.243 30.152 14.626 1.00 0.00 N ATOM 22 CA MET 22 3.019 29.694 13.465 1.00 0.00 C ATOM 22 C MET 22 3.983 30.804 13.039 1.00 0.00 C ATOM 22 O MET 22 5.141 30.563 12.673 1.00 0.00 O ATOM 22 CB MET 22 2.031 29.415 12.318 1.00 0.00 C ATOM 23 N LYS 23 3.467 32.017 13.100 1.00 0.00 N ATOM 23 CA LYS 23 4.218 33.228 12.736 1.00 0.00 C ATOM 23 C LYS 23 5.518 33.384 13.530 1.00 0.00 C ATOM 23 O LYS 23 6.582 33.712 12.988 1.00 0.00 O ATOM 23 CB LYS 23 3.342 34.439 13.109 1.00 0.00 C ATOM 24 N LYS 24 5.393 33.142 14.822 1.00 0.00 N ATOM 24 CA LYS 24 6.514 33.235 15.768 1.00 0.00 C ATOM 24 C LYS 24 7.615 32.244 15.382 1.00 0.00 C ATOM 24 O LYS 24 8.812 32.565 15.363 1.00 0.00 O ATOM 24 CB LYS 24 6.003 32.819 17.163 1.00 0.00 C ATOM 25 N GLN 25 7.168 31.039 15.078 1.00 0.00 N ATOM 25 CA GLN 25 8.052 29.935 14.679 1.00 0.00 C ATOM 25 C GLN 25 8.809 30.311 13.404 1.00 0.00 C ATOM 25 O GLN 25 10.019 30.081 13.267 1.00 0.00 O ATOM 25 CB GLN 25 7.152 28.714 14.394 1.00 0.00 C ATOM 26 N MET 26 8.058 30.892 12.487 1.00 0.00 N ATOM 26 CA MET 26 8.580 31.335 11.188 1.00 0.00 C ATOM 26 C MET 26 9.695 32.353 11.441 1.00 0.00 C ATOM 26 O MET 26 10.729 32.377 10.761 1.00 0.00 O ATOM 26 CB MET 26 7.443 32.019 10.402 1.00 0.00 C ATOM 27 N ILE 27 9.448 33.184 12.436 1.00 0.00 N ATOM 27 CA ILE 27 10.384 34.242 12.849 1.00 0.00 C ATOM 27 C ILE 27 11.704 33.558 13.209 1.00 0.00 C ATOM 27 O ILE 27 12.802 34.063 12.931 1.00 0.00 O ATOM 27 CB ILE 27 9.823 34.910 14.124 1.00 0.00 C ATOM 28 N THR 28 11.556 32.404 13.832 1.00 0.00 N ATOM 28 CA THR 28 12.692 31.581 14.268 1.00 0.00 C ATOM 28 C THR 28 13.513 31.306 13.007 1.00 0.00 C ATOM 28 O THR 28 14.676 30.881 13.060 1.00 0.00 O ATOM 28 CB THR 28 12.117 30.256 14.806 1.00 0.00 C ATOM 29 N GLY 29 12.871 31.563 11.883 1.00 0.00 N ATOM 29 CA GLY 29 13.472 31.370 10.556 1.00 0.00 C ATOM 29 C GLY 29 13.851 29.913 10.272 1.00 0.00 C ATOM 29 O GLY 29 14.672 29.608 9.397 1.00 0.00 O ATOM 30 N GLU 30 13.229 29.036 11.037 1.00 0.00 N ATOM 30 CA GLU 30 13.443 27.584 10.932 1.00 0.00 C ATOM 30 C GLU 30 12.488 27.027 9.874 1.00 0.00 C ATOM 30 O GLU 30 12.760 26.015 9.213 1.00 0.00 O ATOM 30 CB GLU 30 13.087 26.928 12.279 1.00 0.00 C ATOM 31 N TRP 31 11.371 27.718 9.739 1.00 0.00 N ATOM 31 CA TRP 31 10.316 27.358 8.780 1.00 0.00 C ATOM 31 C TRP 31 10.100 28.517 7.806 1.00 0.00 C ATOM 31 O TRP 31 9.550 29.571 8.153 1.00 0.00 O ATOM 31 CB TRP 31 9.010 27.140 9.567 1.00 0.00 C ATOM 32 N LYS 32 10.548 28.286 6.586 1.00 0.00 N ATOM 32 CA LYS 32 10.443 29.266 5.494 1.00 0.00 C ATOM 32 C LYS 32 9.666 28.568 4.377 1.00 0.00 C ATOM 32 O LYS 32 9.932 27.413 4.013 1.00 0.00 O ATOM 32 CB LYS 32 11.862 29.618 5.012 1.00 0.00 C ATOM 33 N GLY 33 8.703 29.304 3.854 1.00 0.00 N ATOM 33 CA GLY 33 7.833 28.829 2.768 1.00 0.00 C ATOM 33 C GLY 33 8.553 28.419 1.480 1.00 0.00 C ATOM 33 O GLY 33 8.326 27.339 0.917 1.00 0.00 O ATOM 34 N GLU 34 9.419 29.311 1.039 1.00 0.00 N ATOM 34 CA GLU 34 10.219 29.120 -0.181 1.00 0.00 C ATOM 34 C GLU 34 11.156 27.924 0.007 1.00 0.00 C ATOM 34 O GLU 34 11.580 27.265 -0.952 1.00 0.00 O ATOM 34 CB GLU 34 11.073 30.383 -0.390 1.00 0.00 C ATOM 35 N ASP 35 11.461 27.670 1.266 1.00 0.00 N ATOM 35 CA ASP 35 12.345 26.567 1.672 1.00 0.00 C ATOM 35 C ASP 35 11.526 25.273 1.700 1.00 0.00 C ATOM 35 O ASP 35 12.062 24.157 1.726 1.00 0.00 O ATOM 35 CB ASP 35 12.836 26.858 3.100 1.00 0.00 C ATOM 36 N LYS 36 10.219 25.462 1.694 1.00 0.00 N ATOM 36 CA LYS 36 9.247 24.359 1.718 1.00 0.00 C ATOM 36 C LYS 36 9.149 23.770 0.308 1.00 0.00 C ATOM 36 O LYS 36 8.870 22.579 0.111 1.00 0.00 O ATOM 36 CB LYS 36 7.883 24.963 2.089 1.00 0.00 C ATOM 37 N LEU 37 9.386 24.640 -0.656 1.00 0.00 N ATOM 37 CA LEU 37 9.344 24.288 -2.084 1.00 0.00 C ATOM 37 C LEU 37 10.685 23.637 -2.432 1.00 0.00 C ATOM 37 O LEU 37 10.774 22.721 -3.261 1.00 0.00 O ATOM 37 CB LEU 37 9.217 25.592 -2.890 1.00 0.00 C ATOM 38 N PRO 38 11.716 24.141 -1.778 1.00 0.00 N ATOM 38 CA PRO 38 13.094 23.665 -1.962 1.00 0.00 C ATOM 38 C PRO 38 13.278 22.215 -1.506 1.00 0.00 C ATOM 38 O PRO 38 14.153 21.482 -1.988 1.00 0.00 O ATOM 38 CB PRO 38 14.010 24.534 -1.082 1.00 0.00 C ATOM 39 N SER 39 12.431 21.835 -0.569 1.00 0.00 N ATOM 39 CA SER 39 12.431 20.484 0.011 1.00 0.00 C ATOM 39 C SER 39 11.609 19.517 -0.845 1.00 0.00 C ATOM 39 O SER 39 11.992 18.365 -1.086 1.00 0.00 O ATOM 39 CB SER 39 11.760 20.521 1.396 1.00 0.00 C ATOM 40 N VAL 40 10.475 20.023 -1.291 1.00 0.00 N ATOM 40 CA VAL 40 9.532 19.267 -2.132 1.00 0.00 C ATOM 40 C VAL 40 10.284 18.878 -3.405 1.00 0.00 C ATOM 40 O VAL 40 10.177 17.752 -3.914 1.00 0.00 O ATOM 40 CB VAL 40 8.340 20.186 -2.479 1.00 0.00 C ATOM 41 N ARG 41 11.040 19.844 -3.895 1.00 0.00 N ATOM 41 CA ARG 41 11.847 19.686 -5.112 1.00 0.00 C ATOM 41 C ARG 41 12.863 18.560 -4.892 1.00 0.00 C ATOM 41 O ARG 41 13.125 17.733 -5.776 1.00 0.00 O ATOM 41 CB ARG 41 12.637 20.993 -5.332 1.00 0.00 C ATOM 42 N GLU 42 13.417 18.560 -3.695 1.00 0.00 N ATOM 42 CA GLU 42 14.418 17.568 -3.273 1.00 0.00 C ATOM 42 C GLU 42 13.837 16.155 -3.381 1.00 0.00 C ATOM 42 O GLU 42 14.481 15.215 -3.865 1.00 0.00 O ATOM 42 CB GLU 42 14.717 17.887 -1.793 1.00 0.00 C ATOM 43 N MET 43 12.607 16.044 -2.915 1.00 0.00 N ATOM 43 CA MET 43 11.859 14.777 -2.921 1.00 0.00 C ATOM 43 C MET 43 11.675 14.274 -4.353 1.00 0.00 C ATOM 43 O MET 43 11.833 13.080 -4.657 1.00 0.00 O ATOM 43 CB MET 43 10.436 15.108 -2.431 1.00 0.00 C ATOM 44 N GLY 44 11.337 15.219 -5.211 1.00 0.00 N ATOM 44 CA GLY 44 11.110 14.955 -6.638 1.00 0.00 C ATOM 44 C GLY 44 12.341 14.425 -7.381 1.00 0.00 C ATOM 44 O GLY 44 12.286 13.424 -8.108 1.00 0.00 O ATOM 45 N VAL 45 13.440 15.126 -7.174 1.00 0.00 N ATOM 45 CA VAL 45 14.734 14.792 -7.789 1.00 0.00 C ATOM 45 C VAL 45 15.183 13.369 -7.448 1.00 0.00 C ATOM 45 O VAL 45 15.618 12.593 -8.312 1.00 0.00 O ATOM 45 CB VAL 45 15.795 15.746 -7.206 1.00 0.00 C ATOM 46 N LYS 46 15.062 13.058 -6.171 1.00 0.00 N ATOM 46 CA LYS 46 15.434 11.744 -5.627 1.00 0.00 C ATOM 46 C LYS 46 14.591 10.627 -6.245 1.00 0.00 C ATOM 46 O LYS 46 15.103 9.597 -6.709 1.00 0.00 O ATOM 46 CB LYS 46 15.125 11.720 -4.114 1.00 0.00 C ATOM 47 N LEU 47 13.293 10.867 -6.234 1.00 0.00 N ATOM 47 CA LEU 47 12.302 9.928 -6.777 1.00 0.00 C ATOM 47 C LEU 47 12.600 9.707 -8.262 1.00 0.00 C ATOM 47 O LEU 47 12.462 8.600 -8.802 1.00 0.00 O ATOM 47 CB LEU 47 10.899 10.550 -6.639 1.00 0.00 C ATOM 48 N ALA 48 13.009 10.790 -8.895 1.00 0.00 N ATOM 48 CA ALA 48 13.349 10.802 -10.326 1.00 0.00 C ATOM 48 C ALA 48 12.005 11.023 -11.020 1.00 0.00 C ATOM 48 O ALA 48 11.722 10.474 -12.096 1.00 0.00 O ATOM 48 CB ALA 48 13.872 9.399 -10.686 1.00 0.00 C ATOM 49 N VAL 49 11.195 11.839 -10.372 1.00 0.00 N ATOM 49 CA VAL 49 9.854 12.190 -10.862 1.00 0.00 C ATOM 49 C VAL 49 10.013 13.565 -11.516 1.00 0.00 C ATOM 49 O VAL 49 10.879 14.371 -11.147 1.00 0.00 O ATOM 49 CB VAL 49 8.932 12.232 -9.628 1.00 0.00 C ATOM 50 N ASN 50 9.154 13.800 -12.490 1.00 0.00 N ATOM 50 CA ASN 50 9.130 15.057 -13.253 1.00 0.00 C ATOM 50 C ASN 50 8.973 16.240 -12.293 1.00 0.00 C ATOM 50 O ASN 50 8.032 16.313 -11.491 1.00 0.00 O ATOM 50 CB ASN 50 7.910 15.021 -14.188 1.00 0.00 C ATOM 51 N PRO 51 9.919 17.154 -12.406 1.00 0.00 N ATOM 51 CA PRO 51 9.960 18.371 -11.582 1.00 0.00 C ATOM 51 C PRO 51 8.595 19.065 -11.597 1.00 0.00 C ATOM 51 O PRO 51 8.161 19.683 -10.615 1.00 0.00 O ATOM 51 CB PRO 51 10.982 19.328 -12.222 1.00 0.00 C ATOM 52 N ASN 52 7.939 18.943 -12.737 1.00 0.00 N ATOM 52 CA ASN 52 6.609 19.532 -12.967 1.00 0.00 C ATOM 52 C ASN 52 5.626 18.958 -11.945 1.00 0.00 C ATOM 52 O ASN 52 4.801 19.673 -11.355 1.00 0.00 O ATOM 52 CB ASN 52 6.150 19.102 -14.376 1.00 0.00 C ATOM 53 N THR 53 5.743 17.656 -11.763 1.00 0.00 N ATOM 53 CA THR 53 4.898 16.902 -10.827 1.00 0.00 C ATOM 53 C THR 53 5.092 17.435 -9.405 1.00 0.00 C ATOM 53 O THR 53 4.138 17.594 -8.628 1.00 0.00 O ATOM 53 CB THR 53 5.347 15.430 -10.896 1.00 0.00 C ATOM 54 N VAL 54 6.347 17.701 -9.096 1.00 0.00 N ATOM 54 CA VAL 54 6.757 18.220 -7.783 1.00 0.00 C ATOM 54 C VAL 54 6.079 19.547 -7.427 1.00 0.00 C ATOM 54 O VAL 54 5.635 19.774 -6.293 1.00 0.00 O ATOM 54 CB VAL 54 8.271 18.485 -7.823 1.00 0.00 C ATOM 55 N SER 55 6.015 20.405 -8.427 1.00 0.00 N ATOM 55 CA SER 55 5.403 21.740 -8.304 1.00 0.00 C ATOM 55 C SER 55 3.943 21.613 -7.867 1.00 0.00 C ATOM 55 O SER 55 3.454 22.337 -6.988 1.00 0.00 O ATOM 55 CB SER 55 5.395 22.392 -9.702 1.00 0.00 C ATOM 56 N ARG 56 3.271 20.674 -8.508 1.00 0.00 N ATOM 56 CA ARG 56 1.854 20.383 -8.245 1.00 0.00 C ATOM 56 C ARG 56 1.759 19.948 -6.782 1.00 0.00 C ATOM 56 O ARG 56 0.827 20.311 -6.048 1.00 0.00 O ATOM 56 CB ARG 56 1.420 19.222 -9.165 1.00 0.00 C ATOM 57 N ALA 57 2.748 19.166 -6.388 1.00 0.00 N ATOM 57 CA ALA 57 2.852 18.634 -5.022 1.00 0.00 C ATOM 57 C ALA 57 2.918 19.773 -4.003 1.00 0.00 C ATOM 57 O ALA 57 2.298 19.730 -2.929 1.00 0.00 O ATOM 57 CB ALA 57 4.219 17.927 -4.914 1.00 0.00 C ATOM 58 N TYR 58 3.683 20.782 -4.373 1.00 0.00 N ATOM 58 CA TYR 58 3.886 21.981 -3.544 1.00 0.00 C ATOM 58 C TYR 58 2.540 22.645 -3.249 1.00 0.00 C ATOM 58 O TYR 58 2.261 23.097 -2.129 1.00 0.00 O ATOM 58 CB TYR 58 4.762 22.954 -4.358 1.00 0.00 C ATOM 59 N GLN 59 1.722 22.688 -4.284 1.00 0.00 N ATOM 59 CA GLN 59 0.377 23.283 -4.222 1.00 0.00 C ATOM 59 C GLN 59 -0.486 22.555 -3.189 1.00 0.00 C ATOM 59 O GLN 59 -1.189 23.167 -2.372 1.00 0.00 O ATOM 59 CB GLN 59 -0.307 23.066 -5.587 1.00 0.00 C ATOM 60 N GLU 60 -0.408 21.239 -3.256 1.00 0.00 N ATOM 60 CA GLU 60 -1.156 20.346 -2.359 1.00 0.00 C ATOM 60 C GLU 60 -0.730 20.643 -0.920 1.00 0.00 C ATOM 60 O GLU 60 -1.551 20.709 0.007 1.00 0.00 O ATOM 60 CB GLU 60 -0.755 18.891 -2.684 1.00 0.00 C ATOM 61 N LEU 61 0.569 20.821 -0.769 1.00 0.00 N ATOM 61 CA LEU 61 1.192 21.117 0.528 1.00 0.00 C ATOM 61 C LEU 61 0.611 22.424 1.072 1.00 0.00 C ATOM 61 O LEU 61 0.290 22.554 2.261 1.00 0.00 O ATOM 61 CB LEU 61 2.694 21.326 0.243 1.00 0.00 C ATOM 62 N GLU 62 0.488 23.377 0.168 1.00 0.00 N ATOM 62 CA GLU 62 -0.049 24.712 0.476 1.00 0.00 C ATOM 62 C GLU 62 -1.473 24.553 1.009 1.00 0.00 C ATOM 62 O GLU 62 -1.899 25.226 1.960 1.00 0.00 O ATOM 62 CB GLU 62 -0.184 25.489 -0.851 1.00 0.00 C ATOM 63 N ARG 63 -2.189 23.647 0.368 1.00 0.00 N ATOM 63 CA ARG 63 -3.583 23.336 0.716 1.00 0.00 C ATOM 63 C ARG 63 -3.666 22.887 2.177 1.00 0.00 C ATOM 63 O ARG 63 -4.592 23.239 2.921 1.00 0.00 O ATOM 63 CB ARG 63 -4.014 22.152 -0.173 1.00 0.00 C ATOM 64 N ALA 64 -2.673 22.102 2.555 1.00 0.00 N ATOM 64 CA ALA 64 -2.557 21.557 3.916 1.00 0.00 C ATOM 64 C ALA 64 -2.155 22.707 4.841 1.00 0.00 C ATOM 64 O ALA 64 -2.607 22.813 5.992 1.00 0.00 O ATOM 64 CB ALA 64 -1.393 20.549 3.937 1.00 0.00 C ATOM 65 N GLY 65 -1.300 23.556 4.302 1.00 0.00 N ATOM 65 CA GLY 65 -0.784 24.733 5.015 1.00 0.00 C ATOM 65 C GLY 65 0.579 24.421 5.639 1.00 0.00 C ATOM 65 O GLY 65 0.697 23.663 6.611 1.00 0.00 O ATOM 66 N TYR 66 1.590 25.029 5.048 1.00 0.00 N ATOM 66 CA TYR 66 2.985 24.871 5.486 1.00 0.00 C ATOM 66 C TYR 66 3.184 26.066 6.418 1.00 0.00 C ATOM 66 O TYR 66 3.424 27.204 5.986 1.00 0.00 O ATOM 66 CB TYR 66 3.966 24.982 4.307 1.00 0.00 C ATOM 67 N ILE 67 3.075 25.771 7.700 1.00 0.00 N ATOM 67 CA ILE 67 3.228 26.769 8.767 1.00 0.00 C ATOM 67 C ILE 67 1.974 27.646 8.831 1.00 0.00 C ATOM 67 O ILE 67 1.990 28.779 9.329 1.00 0.00 O ATOM 67 CB ILE 67 4.397 27.666 8.315 1.00 0.00 C ATOM 68 N TYR 68 0.896 27.086 8.314 1.00 0.00 N ATOM 68 CA TYR 68 -0.417 27.754 8.272 1.00 0.00 C ATOM 68 C TYR 68 -1.487 26.710 8.601 1.00 0.00 C ATOM 68 O TYR 68 -1.764 25.787 7.824 1.00 0.00 O ATOM 68 CB TYR 68 -0.653 28.232 6.828 1.00 0.00 C ATOM 69 N ALA 69 -2.072 26.888 9.771 1.00 0.00 N ATOM 69 CA ALA 69 -3.129 26.002 10.284 1.00 0.00 C ATOM 69 C ALA 69 -4.411 26.745 10.663 1.00 0.00 C ATOM 69 O ALA 69 -4.466 27.503 11.639 1.00 0.00 O ATOM 69 CB ALA 69 -2.566 25.337 11.553 1.00 0.00 C ATOM 70 N LYS 70 -5.432 26.501 9.863 1.00 0.00 N ATOM 70 CA LYS 70 -6.760 27.109 10.044 1.00 0.00 C ATOM 70 C LYS 70 -7.702 25.915 9.870 1.00 0.00 C ATOM 70 O LYS 70 -7.909 25.400 8.763 1.00 0.00 O ATOM 70 CB LYS 70 -7.029 28.106 8.902 1.00 0.00 C ATOM 71 N ARG 71 -8.261 25.501 10.992 1.00 0.00 N ATOM 71 CA ARG 71 -9.200 24.371 11.052 1.00 0.00 C ATOM 71 C ARG 71 -10.467 24.729 11.831 1.00 0.00 C ATOM 71 O ARG 71 -10.428 25.392 12.877 1.00 0.00 O ATOM 71 CB ARG 71 -8.502 23.232 11.815 1.00 0.00 C ATOM 72 N GLY 72 -11.579 24.272 11.289 1.00 0.00 N ATOM 72 CA GLY 72 -12.910 24.501 11.872 1.00 0.00 C ATOM 72 C GLY 72 -12.956 23.523 13.048 1.00 0.00 C ATOM 72 O GLY 72 -13.968 22.855 13.307 1.00 0.00 O ATOM 73 N MET 73 -11.836 23.466 13.744 1.00 0.00 N ATOM 73 CA MET 73 -11.664 22.593 14.914 1.00 0.00 C ATOM 73 C MET 73 -11.474 23.464 16.159 1.00 0.00 C ATOM 73 O MET 73 -10.630 24.370 16.205 1.00 0.00 O ATOM 73 CB MET 73 -10.373 21.784 14.684 1.00 0.00 C ATOM 74 N GLY 74 -12.283 23.159 17.157 1.00 0.00 N ATOM 74 CA GLY 74 -12.271 23.870 18.445 1.00 0.00 C ATOM 74 C GLY 74 -11.031 23.500 19.263 1.00 0.00 C ATOM 74 O GLY 74 -11.116 22.972 20.381 1.00 0.00 O ATOM 75 N SER 75 -9.889 23.794 18.671 1.00 0.00 N ATOM 75 CA SER 75 -8.578 23.525 19.281 1.00 0.00 C ATOM 75 C SER 75 -7.884 24.882 19.429 1.00 0.00 C ATOM 75 O SER 75 -7.832 25.696 18.497 1.00 0.00 O ATOM 75 CB SER 75 -7.752 22.647 18.323 1.00 0.00 C ATOM 76 N PHE 76 -7.360 25.093 20.621 1.00 0.00 N ATOM 76 CA PHE 76 -6.648 26.331 20.979 1.00 0.00 C ATOM 76 C PHE 76 -5.188 25.992 21.288 1.00 0.00 C ATOM 76 O PHE 76 -4.872 25.248 22.226 1.00 0.00 O ATOM 76 CB PHE 76 -7.278 26.891 22.266 1.00 0.00 C ATOM 77 N VAL 77 -4.319 26.561 20.473 1.00 0.00 N ATOM 77 CA VAL 77 -2.866 26.372 20.591 1.00 0.00 C ATOM 77 C VAL 77 -2.251 27.765 20.747 1.00 0.00 C ATOM 77 O VAL 77 -2.459 28.670 19.928 1.00 0.00 O ATOM 77 CB VAL 77 -2.344 25.754 19.282 1.00 0.00 C ATOM 78 N THR 78 -1.493 27.903 21.819 1.00 0.00 N ATOM 78 CA THR 78 -0.808 29.159 22.161 1.00 0.00 C ATOM 78 C THR 78 0.705 28.927 22.209 1.00 0.00 C ATOM 78 O THR 78 1.209 28.028 22.895 1.00 0.00 O ATOM 78 CB THR 78 -1.240 29.553 23.585 1.00 0.00 C ATOM 79 N SER 79 1.404 29.760 21.460 1.00 0.00 N ATOM 79 CA SER 79 2.871 29.714 21.359 1.00 0.00 C ATOM 79 C SER 79 3.270 28.281 20.987 1.00 0.00 C ATOM 79 O SER 79 4.332 27.775 21.369 1.00 0.00 O ATOM 79 CB SER 79 3.406 30.041 22.766 1.00 0.00 C ATOM 80 N ASP 80 2.387 27.654 20.232 1.00 0.00 N ATOM 80 CA ASP 80 2.569 26.271 19.758 1.00 0.00 C ATOM 80 C ASP 80 3.372 26.244 18.452 1.00 0.00 C ATOM 80 O ASP 80 2.858 26.524 17.363 1.00 0.00 O ATOM 80 CB ASP 80 1.164 25.760 19.401 1.00 0.00 C ATOM 81 N LYS 81 4.637 25.900 18.598 1.00 0.00 N ATOM 81 CA LYS 81 5.586 25.810 17.474 1.00 0.00 C ATOM 81 C LYS 81 5.390 24.364 17.018 1.00 0.00 C ATOM 81 O LYS 81 5.952 23.911 16.010 1.00 0.00 O ATOM 81 CB LYS 81 7.035 26.001 17.952 1.00 0.00 C ATOM 82 N ALA 82 4.577 23.664 17.789 1.00 0.00 N ATOM 82 CA ALA 82 4.248 22.256 17.534 1.00 0.00 C ATOM 82 C ALA 82 3.090 22.107 16.543 1.00 0.00 C ATOM 82 O ALA 82 2.961 21.103 15.830 1.00 0.00 O ATOM 82 CB ALA 82 3.766 21.647 18.864 1.00 0.00 C ATOM 83 N LEU 83 2.261 23.133 16.524 1.00 0.00 N ATOM 83 CA LEU 83 1.080 23.197 15.645 1.00 0.00 C ATOM 83 C LEU 83 1.637 23.303 14.224 1.00 0.00 C ATOM 83 O LEU 83 1.169 22.642 13.284 1.00 0.00 O ATOM 83 CB LEU 83 0.342 24.523 15.916 1.00 0.00 C ATOM 84 N PHE 84 2.641 24.150 14.102 1.00 0.00 N ATOM 84 CA PHE 84 3.323 24.405 12.824 1.00 0.00 C ATOM 84 C PHE 84 3.920 23.068 12.384 1.00 0.00 C ATOM 84 O PHE 84 3.897 22.697 11.201 1.00 0.00 O ATOM 84 CB PHE 84 4.457 25.404 13.141 1.00 0.00 C TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 394 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 61.66 75.3 158 100.0 158 ARMSMC SECONDARY STRUCTURE . . 34.05 88.4 86 100.0 86 ARMSMC SURFACE . . . . . . . . 68.70 70.9 110 100.0 110 ARMSMC BURIED . . . . . . . . 41.22 85.4 48 100.0 48 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 68 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 63 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 39 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 47 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 21 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 53 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 45 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 30 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 39 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 14 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 24 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 21 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 16 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 19 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 5 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 12 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 12 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 7 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 12 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 15.04 (Number of atoms: 80) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 15.04 80 100.0 80 CRMSCA CRN = ALL/NP . . . . . 0.1880 CRMSCA SECONDARY STRUCTURE . . 13.77 43 100.0 43 CRMSCA SURFACE . . . . . . . . 15.73 56 100.0 56 CRMSCA BURIED . . . . . . . . 13.30 24 100.0 24 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 14.98 394 100.0 394 CRMSMC SECONDARY STRUCTURE . . 13.75 213 100.0 213 CRMSMC SURFACE . . . . . . . . 15.67 276 100.0 276 CRMSMC BURIED . . . . . . . . 13.23 118 100.0 118 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 14.78 74 23.1 320 CRMSSC RELIABLE SIDE CHAINS . 14.78 74 25.9 286 CRMSSC SECONDARY STRUCTURE . . 13.22 41 22.3 184 CRMSSC SURFACE . . . . . . . . 15.41 52 23.2 224 CRMSSC BURIED . . . . . . . . 13.16 22 22.9 96 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 14.98 394 61.6 640 CRMSALL SECONDARY STRUCTURE . . 13.75 213 59.8 356 CRMSALL SURFACE . . . . . . . . 15.67 276 61.6 448 CRMSALL BURIED . . . . . . . . 13.23 118 61.5 192 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 13.773 1.000 0.500 80 100.0 80 ERRCA SECONDARY STRUCTURE . . 12.785 1.000 0.500 43 100.0 43 ERRCA SURFACE . . . . . . . . 14.419 1.000 0.500 56 100.0 56 ERRCA BURIED . . . . . . . . 12.264 1.000 0.500 24 100.0 24 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 13.735 1.000 0.500 394 100.0 394 ERRMC SECONDARY STRUCTURE . . 12.794 1.000 0.500 213 100.0 213 ERRMC SURFACE . . . . . . . . 14.399 1.000 0.500 276 100.0 276 ERRMC BURIED . . . . . . . . 12.182 1.000 0.500 118 100.0 118 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 13.540 1.000 0.500 74 23.1 320 ERRSC RELIABLE SIDE CHAINS . 13.540 1.000 0.500 74 25.9 286 ERRSC SECONDARY STRUCTURE . . 12.342 1.000 0.500 41 22.3 184 ERRSC SURFACE . . . . . . . . 14.242 1.000 0.500 52 23.2 224 ERRSC BURIED . . . . . . . . 11.880 1.000 0.500 22 22.9 96 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 13.735 1.000 0.500 394 61.6 640 ERRALL SECONDARY STRUCTURE . . 12.794 1.000 0.500 213 59.8 356 ERRALL SURFACE . . . . . . . . 14.399 1.000 0.500 276 61.6 448 ERRALL BURIED . . . . . . . . 12.182 1.000 0.500 118 61.5 192 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 0 22 80 80 DISTCA CA (P) 0.00 0.00 0.00 0.00 27.50 80 DISTCA CA (RMS) 0.00 0.00 0.00 0.00 8.04 DISTCA ALL (N) 0 0 0 2 114 394 640 DISTALL ALL (P) 0.00 0.00 0.00 0.31 17.81 640 DISTALL ALL (RMS) 0.00 0.00 0.00 4.13 8.05 DISTALL END of the results output