####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 39 ( 313), selected 39 , name T0586TS345_1-D2 # Molecule2: number of CA atoms 39 ( 313), selected 39 , name T0586-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0586TS345_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 39 85 - 123 4.80 4.80 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 92 - 114 1.91 5.31 LCS_AVERAGE: 49.84 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 92 - 108 0.99 6.02 LCS_AVERAGE: 38.46 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 39 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT D 85 D 85 8 8 39 6 7 9 9 12 17 23 25 28 29 31 32 33 34 35 36 37 37 39 39 LCS_GDT Q 86 Q 86 8 8 39 6 7 9 9 12 13 19 24 28 29 29 30 32 33 35 36 37 37 39 39 LCS_GDT L 87 L 87 8 8 39 6 7 9 9 10 11 12 14 16 17 26 26 30 31 33 34 36 36 39 39 LCS_GDT K 88 K 88 8 8 39 6 7 9 9 10 13 23 25 28 29 30 32 33 34 35 36 37 37 39 39 LCS_GDT K 89 K 89 8 8 39 6 7 14 18 19 21 24 25 28 29 30 32 33 34 35 36 37 37 39 39 LCS_GDT E 90 E 90 8 8 39 6 7 9 9 12 15 17 21 24 27 28 30 31 33 33 34 36 37 39 39 LCS_GDT L 91 L 91 8 19 39 4 7 9 9 10 12 20 24 28 29 29 30 32 33 35 36 37 37 39 39 LCS_GDT A 92 A 92 17 23 39 11 15 17 18 19 21 24 26 28 30 31 32 33 34 35 36 37 37 39 39 LCS_GDT D 93 D 93 17 23 39 11 15 17 18 19 21 24 26 28 30 31 32 33 34 35 36 37 37 39 39 LCS_GDT A 94 A 94 17 23 39 11 15 17 18 19 21 24 26 28 30 31 32 33 34 35 36 37 37 39 39 LCS_GDT I 95 I 95 17 23 39 11 15 17 18 19 21 24 26 28 30 31 32 33 34 35 36 37 37 39 39 LCS_GDT T 96 T 96 17 23 39 11 15 17 18 19 21 24 26 28 30 31 32 33 34 35 36 37 37 39 39 LCS_GDT E 97 E 97 17 23 39 11 15 17 18 19 21 24 26 28 30 31 32 33 34 35 36 37 37 39 39 LCS_GDT R 98 R 98 17 23 39 11 15 17 18 19 21 24 26 28 30 31 32 33 34 35 36 37 37 39 39 LCS_GDT F 99 F 99 17 23 39 11 15 17 18 19 21 24 26 28 30 31 32 33 34 35 36 37 37 39 39 LCS_GDT L 100 L 100 17 23 39 11 15 17 18 19 21 24 26 28 30 31 32 33 34 35 36 37 37 39 39 LCS_GDT E 101 E 101 17 23 39 11 15 17 18 19 21 24 26 28 30 31 32 33 34 35 36 37 37 39 39 LCS_GDT E 102 E 102 17 23 39 11 15 17 18 19 21 24 26 28 30 31 32 33 34 35 36 37 37 39 39 LCS_GDT A 103 A 103 17 23 39 11 15 17 18 19 21 24 26 28 30 31 32 33 34 35 36 37 37 39 39 LCS_GDT K 104 K 104 17 23 39 4 15 17 18 19 21 24 26 28 30 31 32 33 34 35 36 37 37 39 39 LCS_GDT S 105 S 105 17 23 39 7 15 17 18 19 21 24 26 28 30 31 32 33 34 35 36 37 37 39 39 LCS_GDT I 106 I 106 17 23 39 4 14 17 18 19 21 24 26 28 30 31 32 33 34 35 36 37 37 39 39 LCS_GDT G 107 G 107 17 23 39 4 13 17 18 19 21 24 26 28 30 31 32 33 34 35 36 37 37 39 39 LCS_GDT L 108 L 108 17 23 39 4 13 16 18 19 21 24 26 28 30 31 32 33 34 35 36 37 37 39 39 LCS_GDT D 109 D 109 16 23 39 5 13 16 17 18 21 24 26 28 30 31 32 33 34 35 36 37 37 39 39 LCS_GDT D 110 D 110 16 23 39 5 13 16 17 17 19 23 26 28 30 31 32 33 34 35 36 37 37 39 39 LCS_GDT Q 111 Q 111 16 23 39 5 13 16 17 17 21 24 26 28 30 31 32 33 34 35 36 37 37 39 39 LCS_GDT T 112 T 112 16 23 39 5 13 16 17 19 21 24 26 28 30 31 32 33 34 35 36 37 37 39 39 LCS_GDT A 113 A 113 16 23 39 5 13 16 18 19 21 24 26 28 30 31 32 33 34 35 36 37 37 39 39 LCS_GDT I 114 I 114 16 23 39 8 15 17 18 19 21 24 26 28 30 31 32 33 34 35 36 37 37 39 39 LCS_GDT E 115 E 115 16 18 39 8 13 16 17 18 20 24 26 28 30 31 32 33 34 35 36 37 37 39 39 LCS_GDT L 116 L 116 16 18 39 8 13 16 17 17 17 18 21 28 30 31 32 33 34 35 36 37 37 39 39 LCS_GDT L 117 L 117 16 18 39 8 13 16 17 17 17 19 26 28 30 31 32 33 34 35 36 37 37 39 39 LCS_GDT I 118 I 118 16 18 39 8 13 16 17 17 20 23 26 28 30 31 32 33 34 35 36 37 37 39 39 LCS_GDT K 119 K 119 16 18 39 8 13 16 17 17 17 18 21 26 30 31 32 33 34 35 36 37 37 39 39 LCS_GDT R 120 R 120 16 18 39 8 13 16 17 17 17 18 21 24 27 31 32 33 34 35 36 37 37 39 39 LCS_GDT S 121 S 121 16 18 39 8 13 16 17 17 17 19 26 28 30 31 32 33 34 35 36 37 37 39 39 LCS_GDT R 122 R 122 16 18 39 8 13 16 17 17 17 18 21 28 30 31 32 33 34 35 36 37 37 39 39 LCS_GDT N 123 N 123 16 18 39 6 11 16 17 17 17 18 18 22 25 28 32 32 34 35 35 37 37 39 39 LCS_AVERAGE LCS_A: 62.77 ( 38.46 49.84 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 11 15 17 18 19 21 24 26 28 30 31 32 33 34 35 36 37 37 39 39 GDT PERCENT_AT 28.21 38.46 43.59 46.15 48.72 53.85 61.54 66.67 71.79 76.92 79.49 82.05 84.62 87.18 89.74 92.31 94.87 94.87 100.00 100.00 GDT RMS_LOCAL 0.35 0.57 0.79 0.92 1.06 1.48 1.96 2.54 2.81 3.18 3.37 3.47 3.55 3.73 3.94 4.16 4.36 4.36 4.80 4.80 GDT RMS_ALL_AT 5.47 5.56 5.63 5.82 5.92 5.60 5.27 5.37 5.44 5.44 5.54 5.08 5.00 5.04 5.10 4.85 4.87 4.87 4.80 4.80 # Checking swapping # possible swapping detected: D 85 D 85 # possible swapping detected: E 90 E 90 # possible swapping detected: D 93 D 93 # possible swapping detected: E 97 E 97 # possible swapping detected: F 99 F 99 # possible swapping detected: E 102 E 102 # possible swapping detected: D 109 D 109 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA D 85 D 85 7.187 0 0.050 0.175 9.954 10.476 14.524 LGA Q 86 Q 86 10.904 0 0.077 1.438 17.085 0.119 0.053 LGA L 87 L 87 13.047 0 0.020 1.431 18.675 0.000 0.000 LGA K 88 K 88 6.910 0 0.094 0.743 13.161 24.048 12.857 LGA K 89 K 89 5.331 0 0.091 0.540 9.904 18.095 10.212 LGA E 90 E 90 10.915 0 0.271 0.862 18.088 0.833 0.370 LGA L 91 L 91 9.034 0 0.534 1.472 13.867 6.310 3.155 LGA A 92 A 92 1.775 0 0.578 0.576 4.391 70.476 72.667 LGA D 93 D 93 0.810 0 0.109 0.912 3.124 88.214 76.786 LGA A 94 A 94 1.109 0 0.162 0.206 1.411 81.429 81.429 LGA I 95 I 95 1.200 0 0.063 0.133 1.486 81.429 81.429 LGA T 96 T 96 1.347 0 0.135 1.096 3.193 81.429 73.469 LGA E 97 E 97 1.546 0 0.046 0.768 3.059 72.857 65.079 LGA R 98 R 98 1.965 0 0.062 1.506 7.126 72.857 50.779 LGA F 99 F 99 1.422 0 0.037 0.975 3.872 79.286 69.091 LGA L 100 L 100 1.163 0 0.051 0.144 1.368 81.429 86.012 LGA E 101 E 101 1.236 0 0.162 1.257 5.640 79.286 65.344 LGA E 102 E 102 1.363 0 0.180 1.049 3.100 83.690 76.085 LGA A 103 A 103 1.392 0 0.239 0.252 1.878 77.143 76.286 LGA K 104 K 104 1.474 0 0.063 0.906 7.127 81.429 57.407 LGA S 105 S 105 1.285 0 0.054 0.231 1.717 79.286 77.143 LGA I 106 I 106 1.828 0 0.048 1.225 5.500 75.000 67.202 LGA G 107 G 107 1.414 0 0.470 0.470 1.597 81.548 81.548 LGA L 108 L 108 3.490 0 0.189 0.932 9.905 42.976 25.476 LGA D 109 D 109 3.403 0 0.137 0.882 4.198 51.905 47.679 LGA D 110 D 110 4.639 0 0.040 1.216 9.980 40.476 23.393 LGA Q 111 Q 111 4.004 0 0.048 1.198 10.112 48.690 25.556 LGA T 112 T 112 2.203 0 0.084 0.124 4.252 61.071 55.510 LGA A 113 A 113 3.146 0 0.085 0.093 4.085 57.500 53.429 LGA I 114 I 114 1.310 0 0.031 1.248 5.266 77.143 63.810 LGA E 115 E 115 3.031 0 0.173 0.981 5.513 49.405 43.651 LGA L 116 L 116 5.494 0 0.086 0.495 8.152 25.476 21.964 LGA L 117 L 117 4.670 0 0.032 1.346 7.573 32.857 29.881 LGA I 118 I 118 3.630 0 0.083 0.099 5.305 36.429 44.345 LGA K 119 K 119 7.258 0 0.145 0.824 9.034 10.000 7.249 LGA R 120 R 120 8.237 0 0.041 1.496 11.133 6.190 4.502 LGA S 121 S 121 5.869 0 0.046 0.597 6.791 17.262 26.032 LGA R 122 R 122 7.658 0 0.076 0.994 10.071 5.595 6.840 LGA N 123 N 123 10.431 0 0.544 0.850 13.497 0.357 1.071 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 39 156 156 100.00 313 313 100.00 39 SUMMARY(RMSD_GDC): 4.805 4.826 5.967 48.462 43.059 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 39 39 4.0 26 2.54 60.897 59.366 0.986 LGA_LOCAL RMSD: 2.536 Number of atoms: 26 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 5.370 Number of assigned atoms: 39 Std_ASGN_ATOMS RMSD: 4.805 Standard rmsd on all 39 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.773266 * X + 0.632941 * Y + -0.038021 * Z + 5.898651 Y_new = -0.599826 * X + -0.749616 * Y + -0.279793 * Z + 8.918425 Z_new = -0.205594 * X + -0.193548 * Y + 0.959307 * Z + 7.423818 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.481842 0.207071 -0.199086 [DEG: -142.1991 11.8643 -11.4068 ] ZXZ: -0.135064 0.286258 -2.326024 [DEG: -7.7386 16.4014 -133.2714 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0586TS345_1-D2 REMARK 2: T0586-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0586TS345_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 39 39 4.0 26 2.54 59.366 4.80 REMARK ---------------------------------------------------------- MOLECULE T0586TS345_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0586 REMARK MODEL 1 REMARK PARENT N/A ATOM 668 N ASP 85 0.053 16.290 24.227 1.00 0.00 N ATOM 669 CA ASP 85 0.514 16.502 22.909 1.00 0.00 C ATOM 670 C ASP 85 1.815 15.754 22.612 1.00 0.00 C ATOM 671 O ASP 85 2.003 15.359 21.462 1.00 0.00 O ATOM 672 CB ASP 85 0.346 17.980 22.552 1.00 0.00 C ATOM 673 CG ASP 85 -1.079 18.378 22.251 1.00 0.00 C ATOM 674 OD1 ASP 85 -1.880 17.529 21.796 1.00 0.00 O ATOM 675 OD2 ASP 85 -1.400 19.577 22.405 1.00 0.00 O ATOM 676 N GLN 86 2.700 15.587 23.598 1.00 0.00 N ATOM 677 CA GLN 86 3.855 14.802 23.529 1.00 0.00 C ATOM 678 C GLN 86 3.550 13.321 23.429 1.00 0.00 C ATOM 679 O GLN 86 4.370 12.507 23.008 1.00 0.00 O ATOM 680 CB GLN 86 4.614 14.783 24.818 1.00 0.00 C ATOM 681 CG GLN 86 5.192 16.120 25.200 1.00 0.00 C ATOM 682 CD GLN 86 5.714 16.037 26.616 1.00 0.00 C ATOM 683 OE1 GLN 86 5.400 15.090 27.355 1.00 0.00 O ATOM 684 NE2 GLN 86 6.521 17.019 26.983 1.00 0.00 N ATOM 685 N LEU 87 2.322 12.966 23.810 1.00 0.00 N ATOM 686 CA LEU 87 1.844 11.581 23.688 1.00 0.00 C ATOM 687 C LEU 87 1.327 11.330 22.315 1.00 0.00 C ATOM 688 O LEU 87 1.669 10.332 21.670 1.00 0.00 O ATOM 689 CB LEU 87 0.928 11.271 24.877 1.00 0.00 C ATOM 690 CG LEU 87 1.463 11.503 26.285 1.00 0.00 C ATOM 691 CD1 LEU 87 0.409 11.097 27.287 1.00 0.00 C ATOM 692 CD2 LEU 87 2.723 10.684 26.476 1.00 0.00 C ATOM 693 N LYS 88 0.467 12.234 21.846 1.00 0.00 N ATOM 694 CA LYS 88 -0.129 12.090 20.481 1.00 0.00 C ATOM 695 C LYS 88 0.827 12.177 19.366 1.00 0.00 C ATOM 696 O LYS 88 0.547 11.580 18.329 1.00 0.00 O ATOM 697 CB LYS 88 -1.352 13.010 20.353 1.00 0.00 C ATOM 698 CG LYS 88 -2.391 12.784 21.438 1.00 0.00 C ATOM 699 CD LYS 88 -3.806 13.030 20.932 1.00 0.00 C ATOM 700 CE LYS 88 -4.821 12.527 21.952 1.00 0.00 C ATOM 701 NZ LYS 88 -6.219 12.918 21.627 1.00 0.00 N ATOM 702 N LYS 89 1.991 12.783 19.562 1.00 0.00 N ATOM 703 CA LYS 89 3.063 12.917 18.592 1.00 0.00 C ATOM 704 C LYS 89 3.830 11.720 18.355 1.00 0.00 C ATOM 705 O LYS 89 4.302 11.586 17.234 1.00 0.00 O ATOM 706 CB LYS 89 4.032 14.027 18.965 1.00 0.00 C ATOM 707 CG LYS 89 4.634 14.787 17.771 1.00 0.00 C ATOM 708 CD LYS 89 5.501 15.924 18.213 1.00 0.00 C ATOM 709 CE LYS 89 5.861 16.886 17.087 1.00 0.00 C ATOM 710 NZ LYS 89 4.652 17.875 17.054 1.00 0.00 N ATOM 711 N GLU 90 3.937 10.801 19.315 1.00 0.00 N ATOM 712 CA GLU 90 4.647 9.529 19.270 1.00 0.00 C ATOM 713 C GLU 90 3.545 8.482 18.768 1.00 0.00 C ATOM 714 O GLU 90 3.343 8.181 17.591 1.00 0.00 O ATOM 715 CB GLU 90 5.900 9.787 20.133 1.00 0.00 C ATOM 716 CG GLU 90 6.992 10.655 19.603 1.00 0.00 C ATOM 717 CD GLU 90 8.109 11.081 20.524 1.00 0.00 C ATOM 718 OE1 GLU 90 7.934 11.437 21.703 1.00 0.00 O ATOM 719 OE2 GLU 90 9.275 11.157 20.054 1.00 0.00 O ATOM 720 N LEU 91 2.889 7.969 19.797 1.00 0.00 N ATOM 721 CA LEU 91 1.882 6.932 19.502 1.00 0.00 C ATOM 722 C LEU 91 0.737 7.852 19.133 1.00 0.00 C ATOM 723 O LEU 91 -0.206 8.053 19.908 1.00 0.00 O ATOM 724 CB LEU 91 0.889 6.796 20.647 1.00 0.00 C ATOM 725 CG LEU 91 -0.323 5.923 20.425 1.00 0.00 C ATOM 726 CD1 LEU 91 0.096 4.507 20.069 1.00 0.00 C ATOM 727 CD2 LEU 91 -1.102 5.873 21.750 1.00 0.00 C ATOM 728 N ALA 92 0.830 8.411 17.929 1.00 0.00 N ATOM 729 CA ALA 92 -0.090 9.283 17.262 1.00 0.00 C ATOM 730 C ALA 92 -1.415 8.817 16.792 1.00 0.00 C ATOM 731 O ALA 92 -1.474 7.665 16.343 1.00 0.00 O ATOM 732 CB ALA 92 0.597 10.021 16.099 1.00 0.00 C ATOM 733 N ASP 93 -2.414 9.686 16.727 1.00 0.00 N ATOM 734 CA ASP 93 -3.750 9.276 16.240 1.00 0.00 C ATOM 735 C ASP 93 -3.972 8.163 15.094 1.00 0.00 C ATOM 736 O ASP 93 -4.800 7.266 15.142 1.00 0.00 O ATOM 737 CB ASP 93 -4.606 10.589 16.344 1.00 0.00 C ATOM 738 CG ASP 93 -6.018 10.603 15.720 1.00 0.00 C ATOM 739 OD1 ASP 93 -6.103 10.579 14.471 1.00 0.00 O ATOM 740 OD2 ASP 93 -7.024 10.695 16.474 1.00 0.00 O ATOM 741 N ALA 94 -3.292 8.423 13.983 1.00 0.00 N ATOM 742 CA ALA 94 -3.495 7.464 12.911 1.00 0.00 C ATOM 743 C ALA 94 -2.629 6.203 13.057 1.00 0.00 C ATOM 744 O ALA 94 -2.813 5.226 12.326 1.00 0.00 O ATOM 745 CB ALA 94 -2.990 7.961 11.566 1.00 0.00 C ATOM 746 N ILE 95 -1.686 6.204 13.994 1.00 0.00 N ATOM 747 CA ILE 95 -0.874 5.059 14.248 1.00 0.00 C ATOM 748 C ILE 95 -1.342 4.119 15.349 1.00 0.00 C ATOM 749 O ILE 95 -1.155 2.910 15.164 1.00 0.00 O ATOM 750 CB ILE 95 0.550 5.421 14.726 1.00 0.00 C ATOM 751 CG1 ILE 95 1.225 6.335 13.692 1.00 0.00 C ATOM 752 CG2 ILE 95 1.367 4.140 14.914 1.00 0.00 C ATOM 753 CD1 ILE 95 2.683 6.671 14.014 1.00 0.00 C ATOM 754 N THR 96 -1.958 4.574 16.451 1.00 0.00 N ATOM 755 CA THR 96 -2.504 3.752 17.423 1.00 0.00 C ATOM 756 C THR 96 -3.713 3.137 16.832 1.00 0.00 C ATOM 757 O THR 96 -4.255 2.207 17.393 1.00 0.00 O ATOM 758 CB THR 96 -3.033 4.612 18.575 1.00 0.00 C ATOM 759 OG1 THR 96 -1.961 5.317 19.183 1.00 0.00 O ATOM 760 CG2 THR 96 -3.737 3.739 19.612 1.00 0.00 C ATOM 761 N GLU 97 -4.151 3.662 15.692 1.00 0.00 N ATOM 762 CA GLU 97 -5.313 3.111 14.945 1.00 0.00 C ATOM 763 C GLU 97 -4.834 2.133 14.008 1.00 0.00 C ATOM 764 O GLU 97 -5.438 1.058 13.934 1.00 0.00 O ATOM 765 CB GLU 97 -6.056 4.157 14.109 1.00 0.00 C ATOM 766 CG GLU 97 -6.922 5.134 14.878 1.00 0.00 C ATOM 767 CD GLU 97 -7.734 6.019 13.938 1.00 0.00 C ATOM 768 OE1 GLU 97 -8.656 5.494 13.273 1.00 0.00 O ATOM 769 OE2 GLU 97 -7.443 7.234 13.856 1.00 0.00 O ATOM 770 N ARG 98 -3.748 2.404 13.284 1.00 0.00 N ATOM 771 CA ARG 98 -3.121 1.461 12.316 1.00 0.00 C ATOM 772 C ARG 98 -2.811 0.123 13.057 1.00 0.00 C ATOM 773 O ARG 98 -3.104 -0.947 12.531 1.00 0.00 O ATOM 774 CB ARG 98 -1.800 2.049 11.805 1.00 0.00 C ATOM 775 CG ARG 98 -1.171 1.330 10.597 1.00 0.00 C ATOM 776 CD ARG 98 0.129 2.060 10.242 1.00 0.00 C ATOM 777 NE ARG 98 0.996 1.315 9.326 1.00 0.00 N ATOM 778 CZ ARG 98 0.913 1.518 8.010 1.00 0.00 C ATOM 779 NH1 ARG 98 0.012 2.376 7.548 1.00 0.00 H ATOM 780 NH2 ARG 98 1.683 0.882 7.148 1.00 0.00 H ATOM 781 N PHE 99 -2.255 0.209 14.259 1.00 0.00 N ATOM 782 CA PHE 99 -1.936 -0.880 15.065 1.00 0.00 C ATOM 783 C PHE 99 -3.189 -1.729 15.442 1.00 0.00 C ATOM 784 O PHE 99 -3.270 -2.941 15.220 1.00 0.00 O ATOM 785 CB PHE 99 -1.347 -1.731 16.186 1.00 0.00 C ATOM 786 CG PHE 99 -1.025 -0.906 17.413 1.00 0.00 C ATOM 787 CD1 PHE 99 -2.007 -0.550 18.306 1.00 0.00 C ATOM 788 CD2 PHE 99 0.241 -0.421 17.619 1.00 0.00 C ATOM 789 CE1 PHE 99 -1.724 0.255 19.414 1.00 0.00 C ATOM 790 CE2 PHE 99 0.527 0.385 18.750 1.00 0.00 C ATOM 791 CZ PHE 99 -0.489 0.712 19.621 1.00 0.00 C ATOM 792 N LEU 100 -4.178 -1.035 15.985 1.00 0.00 N ATOM 793 CA LEU 100 -5.394 -1.724 16.396 1.00 0.00 C ATOM 794 C LEU 100 -6.152 -2.388 15.276 1.00 0.00 C ATOM 795 O LEU 100 -6.599 -3.523 15.331 1.00 0.00 O ATOM 796 CB LEU 100 -6.315 -0.781 17.170 1.00 0.00 C ATOM 797 CG LEU 100 -5.812 -0.355 18.547 1.00 0.00 C ATOM 798 CD1 LEU 100 -6.646 0.781 19.137 1.00 0.00 C ATOM 799 CD2 LEU 100 -5.852 -1.549 19.508 1.00 0.00 C ATOM 800 N GLU 101 -6.307 -1.598 14.212 1.00 0.00 N ATOM 801 CA GLU 101 -7.061 -2.142 13.007 1.00 0.00 C ATOM 802 C GLU 101 -6.286 -3.252 12.308 1.00 0.00 C ATOM 803 O GLU 101 -6.800 -3.959 11.442 1.00 0.00 O ATOM 804 CB GLU 101 -7.265 -1.088 11.928 1.00 0.00 C ATOM 805 CG GLU 101 -8.354 -0.093 12.261 1.00 0.00 C ATOM 806 CD GLU 101 -8.465 1.020 11.249 1.00 0.00 C ATOM 807 OE1 GLU 101 -7.437 1.394 10.669 1.00 0.00 O ATOM 808 OE2 GLU 101 -9.577 1.538 11.028 1.00 0.00 O ATOM 809 N GLU 102 -5.013 -3.371 12.674 1.00 0.00 N ATOM 810 CA GLU 102 -4.121 -4.374 12.102 1.00 0.00 C ATOM 811 C GLU 102 -4.237 -5.433 13.214 1.00 0.00 C ATOM 812 O GLU 102 -4.678 -6.523 12.888 1.00 0.00 O ATOM 813 CB GLU 102 -2.847 -3.749 11.521 1.00 0.00 C ATOM 814 CG GLU 102 -3.087 -2.835 10.329 1.00 0.00 C ATOM 815 CD GLU 102 -3.710 -3.565 9.160 1.00 0.00 C ATOM 816 OE1 GLU 102 -3.232 -4.670 8.818 1.00 0.00 O ATOM 817 OE2 GLU 102 -4.684 -3.040 8.576 1.00 0.00 O ATOM 818 N ALA 103 -3.913 -5.138 14.460 1.00 0.00 N ATOM 819 CA ALA 103 -4.087 -6.058 15.508 1.00 0.00 C ATOM 820 C ALA 103 -5.619 -6.432 15.747 1.00 0.00 C ATOM 821 O ALA 103 -5.990 -7.289 16.576 1.00 0.00 O ATOM 822 CB ALA 103 -3.644 -5.496 16.846 1.00 0.00 C ATOM 823 N LYS 104 -6.526 -5.679 15.077 1.00 0.00 N ATOM 824 CA LYS 104 -7.864 -6.109 15.099 1.00 0.00 C ATOM 825 C LYS 104 -8.216 -7.257 14.209 1.00 0.00 C ATOM 826 O LYS 104 -9.119 -8.066 14.487 1.00 0.00 O ATOM 827 CB LYS 104 -8.689 -4.867 14.740 1.00 0.00 C ATOM 828 CG LYS 104 -8.723 -3.786 15.797 1.00 0.00 C ATOM 829 CD LYS 104 -9.902 -2.836 15.634 1.00 0.00 C ATOM 830 CE LYS 104 -9.509 -1.552 14.921 1.00 0.00 C ATOM 831 NZ LYS 104 -8.885 -0.539 15.825 1.00 0.00 N ATOM 832 N SER 105 -7.427 -7.374 13.142 1.00 0.00 N ATOM 833 CA SER 105 -7.657 -8.477 12.136 1.00 0.00 C ATOM 834 C SER 105 -7.461 -9.851 12.781 1.00 0.00 C ATOM 835 O SER 105 -8.064 -10.846 12.379 1.00 0.00 O ATOM 836 CB SER 105 -6.908 -8.337 10.786 1.00 0.00 C ATOM 837 OG SER 105 -5.541 -8.094 11.066 1.00 0.00 O ATOM 838 N ILE 106 -6.663 -9.894 13.842 1.00 0.00 N ATOM 839 CA ILE 106 -6.411 -11.176 14.504 1.00 0.00 C ATOM 840 C ILE 106 -7.605 -11.756 15.345 1.00 0.00 C ATOM 841 O ILE 106 -7.453 -12.774 16.017 1.00 0.00 O ATOM 842 CB ILE 106 -5.335 -10.989 15.592 1.00 0.00 C ATOM 843 CG1 ILE 106 -4.015 -10.566 14.916 1.00 0.00 C ATOM 844 CG2 ILE 106 -5.098 -12.272 16.412 1.00 0.00 C ATOM 845 CD1 ILE 106 -2.915 -10.173 15.910 1.00 0.00 C ATOM 846 N GLY 107 -8.768 -11.121 15.239 1.00 0.00 N ATOM 847 CA GLY 107 -9.908 -11.572 15.936 1.00 0.00 C ATOM 848 C GLY 107 -9.218 -11.577 17.380 1.00 0.00 C ATOM 849 O GLY 107 -8.532 -12.570 17.646 1.00 0.00 O ATOM 850 N LEU 108 -9.387 -10.590 18.240 1.00 0.00 N ATOM 851 CA LEU 108 -9.200 -10.208 19.414 1.00 0.00 C ATOM 852 C LEU 108 -9.513 -10.679 20.863 1.00 0.00 C ATOM 853 O LEU 108 -10.632 -11.152 21.113 1.00 0.00 O ATOM 854 CB LEU 108 -10.048 -8.931 19.519 1.00 0.00 C ATOM 855 CG LEU 108 -11.506 -9.063 19.989 1.00 0.00 C ATOM 856 CD1 LEU 108 -11.595 -8.964 21.513 1.00 0.00 C ATOM 857 CD2 LEU 108 -12.346 -7.962 19.367 1.00 0.00 C ATOM 858 N ASP 109 -8.545 -10.557 21.775 1.00 0.00 N ATOM 859 CA ASP 109 -8.635 -10.807 23.121 1.00 0.00 C ATOM 860 C ASP 109 -7.587 -9.875 23.568 1.00 0.00 C ATOM 861 O ASP 109 -6.577 -9.609 22.916 1.00 0.00 O ATOM 862 CB ASP 109 -7.857 -12.049 23.556 1.00 0.00 C ATOM 863 CG ASP 109 -8.527 -12.820 24.661 1.00 0.00 C ATOM 864 OD1 ASP 109 -8.986 -12.215 25.674 1.00 0.00 O ATOM 865 OD2 ASP 109 -8.551 -14.063 24.522 1.00 0.00 O ATOM 866 N ASP 110 -7.930 -9.218 24.673 1.00 0.00 N ATOM 867 CA ASP 110 -7.215 -8.137 25.425 1.00 0.00 C ATOM 868 C ASP 110 -5.730 -8.188 25.391 1.00 0.00 C ATOM 869 O ASP 110 -5.063 -7.158 25.291 1.00 0.00 O ATOM 870 CB ASP 110 -7.861 -7.795 26.785 1.00 0.00 C ATOM 871 CG ASP 110 -7.506 -8.820 27.845 1.00 0.00 C ATOM 872 OD1 ASP 110 -6.300 -9.187 27.915 1.00 0.00 O ATOM 873 OD2 ASP 110 -8.386 -9.257 28.596 1.00 0.00 O ATOM 874 N GLN 111 -5.182 -9.402 25.431 1.00 0.00 N ATOM 875 CA GLN 111 -3.699 -9.578 25.413 1.00 0.00 C ATOM 876 C GLN 111 -3.158 -8.850 24.082 1.00 0.00 C ATOM 877 O GLN 111 -2.182 -8.105 24.091 1.00 0.00 O ATOM 878 CB GLN 111 -3.341 -11.053 25.468 1.00 0.00 C ATOM 879 CG GLN 111 -1.848 -11.245 25.645 1.00 0.00 C ATOM 880 CD GLN 111 -1.414 -12.658 25.707 1.00 0.00 C ATOM 881 OE1 GLN 111 -2.015 -13.566 25.135 1.00 0.00 O ATOM 882 NE2 GLN 111 -0.325 -12.873 26.445 1.00 0.00 N ATOM 883 N THR 112 -3.835 -9.139 22.978 1.00 0.00 N ATOM 884 CA THR 112 -3.477 -8.594 21.749 1.00 0.00 C ATOM 885 C THR 112 -3.656 -7.105 21.567 1.00 0.00 C ATOM 886 O THR 112 -2.959 -6.400 20.860 1.00 0.00 O ATOM 887 CB THR 112 -4.287 -9.220 20.600 1.00 0.00 C ATOM 888 OG1 THR 112 -4.094 -10.638 20.604 1.00 0.00 O ATOM 889 CG2 THR 112 -3.737 -8.694 19.269 1.00 0.00 C ATOM 890 N ALA 113 -4.704 -6.630 22.236 1.00 0.00 N ATOM 891 CA ALA 113 -5.013 -5.125 21.947 1.00 0.00 C ATOM 892 C ALA 113 -3.811 -4.201 22.441 1.00 0.00 C ATOM 893 O ALA 113 -3.203 -3.357 21.776 1.00 0.00 O ATOM 894 CB ALA 113 -6.362 -4.760 22.562 1.00 0.00 C ATOM 895 N ILE 114 -3.518 -4.460 23.707 1.00 0.00 N ATOM 896 CA ILE 114 -2.459 -3.579 24.299 1.00 0.00 C ATOM 897 C ILE 114 -1.083 -3.829 23.732 1.00 0.00 C ATOM 898 O ILE 114 -0.305 -2.935 23.407 1.00 0.00 O ATOM 899 CB ILE 114 -2.657 -3.394 25.821 1.00 0.00 C ATOM 900 CG1 ILE 114 -2.493 -4.736 26.545 1.00 0.00 C ATOM 901 CG2 ILE 114 -4.053 -2.804 26.093 1.00 0.00 C ATOM 902 CD1 ILE 114 -2.370 -4.604 28.070 1.00 0.00 C ATOM 903 N GLU 115 -0.800 -5.123 23.569 1.00 0.00 N ATOM 904 CA GLU 115 0.572 -5.469 23.002 1.00 0.00 C ATOM 905 C GLU 115 0.675 -5.169 21.523 1.00 0.00 C ATOM 906 O GLU 115 1.748 -5.232 20.918 1.00 0.00 O ATOM 907 CB GLU 115 0.749 -6.987 22.981 1.00 0.00 C ATOM 908 CG GLU 115 0.672 -7.635 24.350 1.00 0.00 C ATOM 909 CD GLU 115 0.927 -9.127 24.304 1.00 0.00 C ATOM 910 OE1 GLU 115 0.271 -9.819 23.496 1.00 0.00 O ATOM 911 OE2 GLU 115 1.781 -9.609 25.075 1.00 0.00 O ATOM 912 N LEU 116 -0.463 -4.776 20.956 1.00 0.00 N ATOM 913 CA LEU 116 -0.593 -4.366 19.558 1.00 0.00 C ATOM 914 C LEU 116 -0.016 -2.895 19.622 1.00 0.00 C ATOM 915 O LEU 116 0.830 -2.478 18.819 1.00 0.00 O ATOM 916 CB LEU 116 -1.885 -4.774 18.867 1.00 0.00 C ATOM 917 CG LEU 116 -1.548 -5.973 17.989 1.00 0.00 C ATOM 918 CD1 LEU 116 -2.578 -7.064 18.169 1.00 0.00 C ATOM 919 CD2 LEU 116 -1.381 -5.530 16.536 1.00 0.00 C ATOM 920 N LEU 117 -0.521 -2.142 20.599 1.00 0.00 N ATOM 921 CA LEU 117 -0.067 -0.794 20.742 1.00 0.00 C ATOM 922 C LEU 117 1.473 -0.750 21.087 1.00 0.00 C ATOM 923 O LEU 117 2.239 0.037 20.543 1.00 0.00 O ATOM 924 CB LEU 117 -0.837 -0.020 21.804 1.00 0.00 C ATOM 925 CG LEU 117 -2.290 0.297 21.643 1.00 0.00 C ATOM 926 CD1 LEU 117 -2.784 1.245 22.746 1.00 0.00 C ATOM 927 CD2 LEU 117 -2.504 0.998 20.293 1.00 0.00 C ATOM 928 N ILE 118 1.892 -1.634 21.991 1.00 0.00 N ATOM 929 CA ILE 118 3.274 -1.683 22.320 1.00 0.00 C ATOM 930 C ILE 118 4.207 -2.102 21.189 1.00 0.00 C ATOM 931 O ILE 118 5.368 -1.708 21.114 1.00 0.00 O ATOM 932 CB ILE 118 3.495 -2.704 23.459 1.00 0.00 C ATOM 933 CG1 ILE 118 2.765 -2.263 24.738 1.00 0.00 C ATOM 934 CG2 ILE 118 4.989 -2.856 23.666 1.00 0.00 C ATOM 935 CD1 ILE 118 2.806 -3.218 25.905 1.00 0.00 C ATOM 936 N LYS 119 3.669 -2.962 20.325 1.00 0.00 N ATOM 937 CA LYS 119 4.483 -3.436 19.173 1.00 0.00 C ATOM 938 C LYS 119 4.538 -2.358 18.138 1.00 0.00 C ATOM 939 O LYS 119 5.369 -2.372 17.231 1.00 0.00 O ATOM 940 CB LYS 119 3.783 -4.611 18.484 1.00 0.00 C ATOM 941 CG LYS 119 4.537 -5.927 18.552 1.00 0.00 C ATOM 942 CD LYS 119 3.801 -6.934 19.427 1.00 0.00 C ATOM 943 CE LYS 119 4.041 -8.359 18.955 1.00 0.00 C ATOM 944 NZ LYS 119 2.873 -8.901 18.200 1.00 0.00 N ATOM 945 N ARG 120 3.669 -1.359 18.295 1.00 0.00 N ATOM 946 CA ARG 120 3.657 -0.169 17.418 1.00 0.00 C ATOM 947 C ARG 120 4.644 0.819 17.935 1.00 0.00 C ATOM 948 O ARG 120 5.433 1.360 17.151 1.00 0.00 O ATOM 949 CB ARG 120 2.218 0.069 16.955 1.00 0.00 C ATOM 950 CG ARG 120 1.562 -1.168 16.306 1.00 0.00 C ATOM 951 CD ARG 120 2.328 -1.630 15.053 1.00 0.00 C ATOM 952 NE ARG 120 2.263 -0.648 13.974 1.00 0.00 N ATOM 953 CZ ARG 120 3.306 -0.217 13.262 1.00 0.00 C ATOM 954 NH1 ARG 120 4.530 -0.686 13.495 1.00 0.00 H ATOM 955 NH2 ARG 120 3.134 0.733 12.352 1.00 0.00 H ATOM 956 N SER 121 4.618 1.093 19.239 1.00 0.00 N ATOM 957 CA SER 121 5.551 2.027 19.873 1.00 0.00 C ATOM 958 C SER 121 7.015 1.652 19.547 1.00 0.00 C ATOM 959 O SER 121 7.838 2.505 19.237 1.00 0.00 O ATOM 960 CB SER 121 5.182 2.069 21.394 1.00 0.00 C ATOM 961 OG SER 121 5.693 0.853 21.986 1.00 0.00 O ATOM 962 N ARG 122 7.319 0.372 19.730 1.00 0.00 N ATOM 963 CA ARG 122 8.654 -0.130 19.476 1.00 0.00 C ATOM 964 C ARG 122 9.080 -0.242 18.023 1.00 0.00 C ATOM 965 O ARG 122 10.264 -0.437 17.759 1.00 0.00 O ATOM 966 CB ARG 122 8.827 -1.408 20.306 1.00 0.00 C ATOM 967 CG ARG 122 8.361 -1.223 21.743 1.00 0.00 C ATOM 968 CD ARG 122 8.531 -2.457 22.608 1.00 0.00 C ATOM 969 NE ARG 122 9.933 -2.785 22.864 1.00 0.00 N ATOM 970 CZ ARG 122 10.333 -3.768 23.667 1.00 0.00 C ATOM 971 NH1 ARG 122 9.439 -4.526 24.293 1.00 0.00 H ATOM 972 NH2 ARG 122 11.627 -3.995 23.850 1.00 0.00 H ATOM 973 N ASN 123 8.151 -0.189 17.078 1.00 0.00 N ATOM 974 CA ASN 123 8.565 -0.364 15.685 1.00 0.00 C ATOM 975 C ASN 123 8.026 0.970 15.264 1.00 0.00 C ATOM 976 O ASN 123 6.760 1.016 15.201 1.00 0.00 O ATOM 977 CB ASN 123 7.508 -1.233 15.000 1.00 0.00 C ATOM 978 CG ASN 123 7.421 -2.626 15.598 1.00 0.00 C ATOM 979 OD1 ASN 123 8.391 -3.140 16.158 1.00 0.00 O ATOM 980 ND2 ASN 123 6.249 -3.245 15.483 1.00 0.00 N TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 313 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 37.44 81.6 76 100.0 76 ARMSMC SECONDARY STRUCTURE . . 30.39 85.9 64 100.0 64 ARMSMC SURFACE . . . . . . . . 38.19 81.9 72 100.0 72 ARMSMC BURIED . . . . . . . . 19.68 75.0 4 100.0 4 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 95.35 32.4 34 100.0 34 ARMSSC1 RELIABLE SIDE CHAINS . 95.35 32.4 34 100.0 34 ARMSSC1 SECONDARY STRUCTURE . . 96.56 28.6 28 100.0 28 ARMSSC1 SURFACE . . . . . . . . 95.35 32.4 34 100.0 34 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 66.73 46.7 30 100.0 30 ARMSSC2 RELIABLE SIDE CHAINS . 60.34 52.2 23 100.0 23 ARMSSC2 SECONDARY STRUCTURE . . 73.15 41.7 24 100.0 24 ARMSSC2 SURFACE . . . . . . . . 66.73 46.7 30 100.0 30 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 70.35 28.6 14 100.0 14 ARMSSC3 RELIABLE SIDE CHAINS . 69.96 33.3 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 66.23 30.8 13 100.0 13 ARMSSC3 SURFACE . . . . . . . . 70.35 28.6 14 100.0 14 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 88.39 28.6 7 100.0 7 ARMSSC4 RELIABLE SIDE CHAINS . 88.39 28.6 7 100.0 7 ARMSSC4 SECONDARY STRUCTURE . . 95.46 16.7 6 100.0 6 ARMSSC4 SURFACE . . . . . . . . 88.39 28.6 7 100.0 7 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 4.80 (Number of atoms: 39) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 4.80 39 100.0 39 CRMSCA CRN = ALL/NP . . . . . 0.1232 CRMSCA SECONDARY STRUCTURE . . 4.69 32 100.0 32 CRMSCA SURFACE . . . . . . . . 4.87 37 100.0 37 CRMSCA BURIED . . . . . . . . 3.34 2 100.0 2 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 4.96 194 100.0 194 CRMSMC SECONDARY STRUCTURE . . 4.74 160 100.0 160 CRMSMC SURFACE . . . . . . . . 5.03 184 100.0 184 CRMSMC BURIED . . . . . . . . 3.37 10 100.0 10 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 6.93 157 100.0 157 CRMSSC RELIABLE SIDE CHAINS . 6.53 139 100.0 139 CRMSSC SECONDARY STRUCTURE . . 7.02 130 100.0 130 CRMSSC SURFACE . . . . . . . . 6.97 155 100.0 155 CRMSSC BURIED . . . . . . . . 3.74 2 100.0 2 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 5.98 313 100.0 313 CRMSALL SECONDARY STRUCTURE . . 5.93 258 100.0 258 CRMSALL SURFACE . . . . . . . . 6.05 303 100.0 303 CRMSALL BURIED . . . . . . . . 3.37 10 100.0 10 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.193 1.000 0.500 39 100.0 39 ERRCA SECONDARY STRUCTURE . . 4.088 1.000 0.500 32 100.0 32 ERRCA SURFACE . . . . . . . . 4.246 1.000 0.500 37 100.0 37 ERRCA BURIED . . . . . . . . 3.219 1.000 0.500 2 100.0 2 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.288 1.000 0.500 194 100.0 194 ERRMC SECONDARY STRUCTURE . . 4.123 1.000 0.500 160 100.0 160 ERRMC SURFACE . . . . . . . . 4.345 1.000 0.500 184 100.0 184 ERRMC BURIED . . . . . . . . 3.226 1.000 0.500 10 100.0 10 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 6.019 1.000 0.500 157 100.0 157 ERRSC RELIABLE SIDE CHAINS . 5.679 1.000 0.500 139 100.0 139 ERRSC SECONDARY STRUCTURE . . 5.986 1.000 0.500 130 100.0 130 ERRSC SURFACE . . . . . . . . 6.051 1.000 0.500 155 100.0 155 ERRSC BURIED . . . . . . . . 3.517 1.000 0.500 2 100.0 2 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 5.098 1.000 0.500 313 100.0 313 ERRALL SECONDARY STRUCTURE . . 5.002 1.000 0.500 258 100.0 258 ERRALL SURFACE . . . . . . . . 5.160 1.000 0.500 303 100.0 303 ERRALL BURIED . . . . . . . . 3.226 1.000 0.500 10 100.0 10 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 7 14 28 39 39 39 DISTCA CA (P) 0.00 17.95 35.90 71.79 100.00 39 DISTCA CA (RMS) 0.00 1.57 2.16 3.06 4.80 DISTCA ALL (N) 5 37 100 178 289 313 313 DISTALL ALL (P) 1.60 11.82 31.95 56.87 92.33 313 DISTALL ALL (RMS) 0.63 1.52 2.25 3.04 5.06 DISTALL END of the results output