####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 113 ( 452), selected 111 , name T0586TS328_1 # Molecule2: number of CA atoms 119 ( 953), selected 111 , name T0586.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0586TS328_1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 111 13 - 123 3.91 3.91 LCS_AVERAGE: 93.28 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 80 13 - 92 1.95 7.03 LCS_AVERAGE: 59.40 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 67 13 - 79 0.93 8.32 LCS_AVERAGE: 42.24 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 111 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT P 13 P 13 67 80 111 10 44 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT I 14 I 14 67 80 111 20 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT Y 15 Y 15 67 80 111 28 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT S 16 S 16 67 80 111 10 50 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT Q 17 Q 17 67 80 111 28 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT I 18 I 18 67 80 111 29 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT S 19 S 19 67 80 111 25 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT D 20 D 20 67 80 111 15 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT W 21 W 21 67 80 111 18 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT M 22 M 22 67 80 111 29 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT K 23 K 23 67 80 111 29 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT K 24 K 24 67 80 111 25 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT Q 25 Q 25 67 80 111 29 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT M 26 M 26 67 80 111 29 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT I 27 I 27 67 80 111 18 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT T 28 T 28 67 80 111 13 40 65 66 69 75 77 80 83 85 90 103 107 111 111 111 111 111 111 111 LCS_GDT G 29 G 29 67 80 111 19 52 65 66 69 75 78 81 84 93 102 105 108 111 111 111 111 111 111 111 LCS_GDT E 30 E 30 67 80 111 18 52 65 66 69 75 78 81 84 88 102 105 108 111 111 111 111 111 111 111 LCS_GDT W 31 W 31 67 80 111 23 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT K 32 K 32 67 80 111 22 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT G 33 G 33 67 80 111 29 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT E 34 E 34 67 80 111 29 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT D 35 D 35 67 80 111 29 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT K 36 K 36 67 80 111 10 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT L 37 L 37 67 80 111 20 51 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT P 38 P 38 67 80 111 10 44 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT S 39 S 39 67 80 111 17 44 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT V 40 V 40 67 80 111 19 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT R 41 R 41 67 80 111 18 47 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT E 42 E 42 67 80 111 17 44 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT M 43 M 43 67 80 111 17 51 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT G 44 G 44 67 80 111 19 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT V 45 V 45 67 80 111 21 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT K 46 K 46 67 80 111 13 41 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT L 47 L 47 67 80 111 17 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT A 48 A 48 67 80 111 17 45 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT V 49 V 49 67 80 111 19 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT N 50 N 50 67 80 111 29 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT P 51 P 51 67 80 111 29 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT N 52 N 52 67 80 111 29 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT T 53 T 53 67 80 111 29 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT V 54 V 54 67 80 111 29 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT S 55 S 55 67 80 111 29 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT R 56 R 56 67 80 111 29 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT A 57 A 57 67 80 111 29 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT Y 58 Y 58 67 80 111 29 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT Q 59 Q 59 67 80 111 29 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT E 60 E 60 67 80 111 29 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT L 61 L 61 67 80 111 29 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT E 62 E 62 67 80 111 29 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT R 63 R 63 67 80 111 29 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT A 64 A 64 67 80 111 29 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT G 65 G 65 67 80 111 29 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT Y 66 Y 66 67 80 111 29 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT I 67 I 67 67 80 111 29 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT Y 68 Y 68 67 80 111 29 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT A 69 A 69 67 80 111 29 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT K 70 K 70 67 80 111 24 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT R 71 R 71 67 80 111 13 51 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT G 72 G 72 67 80 111 8 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT M 73 M 73 67 80 111 26 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT G 74 G 74 67 80 111 28 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT S 75 S 75 67 80 111 28 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT F 76 F 76 67 80 111 29 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT V 77 V 77 67 80 111 28 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT T 78 T 78 67 80 111 26 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT S 79 S 79 67 80 111 5 9 19 38 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT D 80 D 80 49 80 111 5 9 21 52 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT K 81 K 81 11 80 111 5 9 22 52 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT A 82 A 82 11 80 111 5 13 24 62 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT L 83 L 83 11 80 111 5 13 28 64 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT F 84 F 84 11 80 111 5 14 21 45 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT D 85 D 85 11 80 111 5 13 26 48 69 75 78 81 84 92 102 105 108 111 111 111 111 111 111 111 LCS_GDT Q 86 Q 86 11 80 111 5 21 50 65 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT L 87 L 87 11 80 111 5 20 38 54 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT K 88 K 88 11 80 111 4 16 32 49 61 74 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT K 89 K 89 11 80 111 4 7 25 45 57 73 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT E 90 E 90 10 80 111 4 18 28 45 60 73 78 81 84 92 102 105 108 111 111 111 111 111 111 111 LCS_GDT L 91 L 91 6 80 111 4 18 28 35 56 70 78 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT A 92 A 92 6 80 111 4 6 10 23 40 41 68 79 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT D 93 D 93 21 66 111 4 6 10 24 30 54 72 80 84 85 94 100 106 111 111 111 111 111 111 111 LCS_GDT A 94 A 94 30 66 111 4 6 14 29 61 74 78 81 84 87 95 100 106 111 111 111 111 111 111 111 LCS_GDT I 95 I 95 30 66 111 6 20 28 31 37 48 69 80 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT T 96 T 96 30 65 111 15 21 28 40 50 62 76 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT E 97 E 97 30 65 111 15 21 28 40 51 62 76 81 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT R 98 R 98 30 43 111 15 21 28 35 40 47 64 75 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT F 99 F 99 30 43 111 15 21 28 35 40 42 57 71 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT L 100 L 100 30 43 111 15 21 28 35 40 49 60 73 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT E 101 E 101 30 43 111 15 21 28 35 40 43 57 71 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT E 102 E 102 30 43 111 15 21 28 35 40 41 51 63 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT A 103 A 103 30 43 111 15 21 28 35 40 41 51 66 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT K 104 K 104 30 43 111 15 21 28 35 40 41 51 66 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT S 105 S 105 30 43 111 15 21 28 35 40 41 45 56 70 88 99 105 108 111 111 111 111 111 111 111 LCS_GDT I 106 I 106 30 43 111 15 21 28 35 40 41 45 55 66 80 97 104 108 111 111 111 111 111 111 111 LCS_GDT G 107 G 107 30 43 111 15 21 28 35 40 41 45 55 65 80 97 104 108 111 111 111 111 111 111 111 LCS_GDT L 108 L 108 30 43 111 15 21 28 35 40 41 45 55 67 85 99 105 108 111 111 111 111 111 111 111 LCS_GDT D 109 D 109 30 43 111 6 21 28 35 40 41 45 55 68 88 100 105 108 111 111 111 111 111 111 111 LCS_GDT D 110 D 110 30 43 111 6 21 28 35 40 41 51 69 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT Q 111 Q 111 30 43 111 6 21 28 35 40 41 49 69 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT T 112 T 112 30 43 111 15 21 28 35 40 41 49 66 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT A 113 A 113 30 43 111 6 21 28 35 40 41 51 71 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT I 114 I 114 30 43 111 6 16 28 35 40 41 57 71 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT E 115 E 115 30 43 111 15 21 28 35 40 41 57 71 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT L 116 L 116 30 43 111 7 17 28 35 40 41 53 71 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT L 117 L 117 30 43 111 7 21 28 35 40 41 57 71 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT I 118 I 118 30 43 111 13 20 28 35 40 49 59 73 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT K 119 K 119 30 43 111 7 13 28 35 40 41 53 71 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT R 120 R 120 30 43 111 11 19 28 35 40 41 53 70 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT S 121 S 121 30 43 111 15 21 28 35 40 41 53 71 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT R 122 R 122 30 43 111 7 20 28 35 40 41 51 66 84 94 102 105 108 111 111 111 111 111 111 111 LCS_GDT N 123 N 123 30 43 111 6 13 28 35 40 41 45 61 79 93 100 105 108 111 111 111 111 111 111 111 LCS_AVERAGE LCS_A: 64.97 ( 42.24 59.40 93.28 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 29 52 65 66 69 75 78 81 84 94 102 105 108 111 111 111 111 111 111 111 GDT PERCENT_AT 24.37 43.70 54.62 55.46 57.98 63.03 65.55 68.07 70.59 78.99 85.71 88.24 90.76 93.28 93.28 93.28 93.28 93.28 93.28 93.28 GDT RMS_LOCAL 0.36 0.61 0.81 0.83 1.08 1.46 1.75 2.03 2.25 3.35 3.54 3.66 3.79 3.91 3.91 3.91 3.91 3.91 3.91 3.91 GDT RMS_ALL_AT 8.73 8.61 8.23 8.31 8.17 8.00 7.29 6.52 6.20 3.93 3.95 3.92 3.92 3.91 3.91 3.91 3.91 3.91 3.91 3.91 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA P 13 P 13 2.877 3 0.037 0.037 3.329 59.167 33.810 LGA I 14 I 14 1.431 4 0.077 0.077 2.004 77.262 38.631 LGA Y 15 Y 15 1.022 8 0.056 0.056 1.219 81.429 27.143 LGA S 16 S 16 2.044 2 0.124 0.124 2.044 70.833 47.222 LGA Q 17 Q 17 1.497 5 0.045 0.045 1.687 79.286 35.238 LGA I 18 I 18 1.294 4 0.105 0.105 1.582 79.286 39.643 LGA S 19 S 19 1.483 2 0.048 0.048 1.835 77.143 51.429 LGA D 20 D 20 2.221 4 0.074 0.074 2.343 66.786 33.393 LGA W 21 W 21 2.170 10 0.044 0.044 2.379 64.762 18.503 LGA M 22 M 22 1.883 4 0.039 0.039 1.998 72.857 36.429 LGA K 23 K 23 2.081 5 0.025 0.025 2.378 66.786 29.683 LGA K 24 K 24 2.457 5 0.030 0.030 2.534 62.857 27.937 LGA Q 25 Q 25 2.354 5 0.021 0.021 2.357 64.762 28.783 LGA M 26 M 26 2.146 4 0.104 0.104 2.793 60.952 30.476 LGA I 27 I 27 2.973 4 0.087 0.087 3.799 51.905 25.952 LGA T 28 T 28 3.719 3 0.059 0.059 3.804 45.000 25.714 LGA G 29 G 29 3.126 0 0.059 0.059 3.255 50.000 50.000 LGA E 30 E 30 2.972 5 0.033 0.033 3.051 55.357 24.603 LGA W 31 W 31 2.132 10 0.032 0.032 2.402 64.762 18.503 LGA K 32 K 32 2.475 5 0.037 0.037 2.475 68.810 30.582 LGA G 33 G 33 1.386 0 0.046 0.046 1.853 77.143 77.143 LGA E 34 E 34 1.125 5 0.112 0.112 1.574 79.286 35.238 LGA D 35 D 35 1.850 4 0.065 0.065 1.850 77.143 38.571 LGA K 36 K 36 1.307 5 0.059 0.059 1.587 81.548 36.243 LGA L 37 L 37 0.557 4 0.030 0.030 0.752 90.476 45.238 LGA P 38 P 38 0.803 3 0.043 0.043 0.864 90.476 51.701 LGA S 39 S 39 0.863 2 0.060 0.060 0.922 90.476 60.317 LGA V 40 V 40 0.504 3 0.019 0.019 0.604 95.238 54.422 LGA R 41 R 41 0.365 7 0.061 0.061 0.379 100.000 36.364 LGA E 42 E 42 0.724 5 0.139 0.139 0.797 90.476 40.212 LGA M 43 M 43 0.645 4 0.084 0.084 0.660 90.476 45.238 LGA G 44 G 44 0.665 0 0.099 0.099 0.683 90.476 90.476 LGA V 45 V 45 0.656 3 0.114 0.114 0.864 90.476 51.701 LGA K 46 K 46 1.088 5 0.064 0.064 1.088 85.952 38.201 LGA L 47 L 47 0.598 4 0.073 0.073 0.843 90.476 45.238 LGA A 48 A 48 1.014 1 0.043 0.043 1.014 88.214 70.571 LGA V 49 V 49 0.535 3 0.117 0.117 0.935 90.476 51.701 LGA N 50 N 50 0.512 4 0.028 0.028 0.684 90.476 45.238 LGA P 51 P 51 0.484 3 0.012 0.012 0.698 92.857 53.061 LGA N 52 N 52 1.151 4 0.085 0.085 1.353 83.690 41.845 LGA T 53 T 53 1.301 3 0.062 0.062 1.301 81.429 46.531 LGA V 54 V 54 0.859 3 0.070 0.070 0.999 90.476 51.701 LGA S 55 S 55 0.795 2 0.000 0.000 0.899 90.476 60.317 LGA R 56 R 56 1.051 7 0.063 0.063 1.101 83.690 30.433 LGA A 57 A 57 1.012 1 0.047 0.047 1.012 88.214 70.571 LGA Y 58 Y 58 0.898 8 0.018 0.018 1.033 88.214 29.405 LGA Q 59 Q 59 1.097 5 0.033 0.033 1.314 81.429 36.190 LGA E 60 E 60 1.126 5 0.020 0.020 1.141 81.429 36.190 LGA L 61 L 61 1.010 4 0.027 0.027 1.020 85.952 42.976 LGA E 62 E 62 0.876 5 0.017 0.017 0.968 90.476 40.212 LGA R 63 R 63 1.221 7 0.033 0.033 1.479 81.429 29.610 LGA A 64 A 64 1.347 1 0.053 0.053 1.347 81.429 65.143 LGA G 65 G 65 0.859 0 0.072 0.072 0.958 90.476 90.476 LGA Y 66 Y 66 0.955 8 0.056 0.056 1.110 88.214 29.405 LGA I 67 I 67 0.609 4 0.035 0.035 0.818 90.476 45.238 LGA Y 68 Y 68 0.916 8 0.009 0.009 0.916 90.476 30.159 LGA A 69 A 69 1.065 1 0.053 0.053 1.065 88.214 70.571 LGA K 70 K 70 0.782 5 0.089 0.089 1.011 85.952 38.201 LGA R 71 R 71 1.627 7 0.052 0.052 1.646 77.143 28.052 LGA G 72 G 72 2.207 0 0.200 0.200 2.693 62.857 62.857 LGA M 73 M 73 1.376 4 0.105 0.105 1.731 79.286 39.643 LGA G 74 G 74 0.896 0 0.048 0.048 1.074 88.214 88.214 LGA S 75 S 75 0.856 2 0.046 0.046 0.886 90.476 60.317 LGA F 76 F 76 0.769 7 0.030 0.030 0.849 90.476 32.900 LGA V 77 V 77 1.042 3 0.041 0.041 1.092 83.690 47.823 LGA T 78 T 78 1.269 3 0.568 0.568 3.783 69.762 39.864 LGA S 79 S 79 2.905 2 0.492 0.492 5.876 50.833 33.889 LGA D 80 D 80 2.839 4 0.209 0.209 2.839 59.048 29.524 LGA K 81 K 81 2.870 5 0.061 0.061 2.915 57.143 25.397 LGA A 82 A 82 2.750 1 0.197 0.197 2.762 62.976 50.381 LGA L 83 L 83 2.284 4 0.012 0.012 2.618 62.857 31.429 LGA F 84 F 84 3.119 7 0.015 0.015 3.164 51.786 18.831 LGA D 85 D 85 3.220 4 0.035 0.035 3.220 53.571 26.786 LGA Q 86 Q 86 1.569 5 0.066 0.066 2.164 72.976 32.434 LGA L 87 L 87 2.343 4 0.135 0.135 2.746 62.976 31.488 LGA K 88 K 88 2.943 5 0.049 0.049 3.269 53.571 23.810 LGA K 89 K 89 3.861 5 0.086 0.086 4.101 41.786 18.571 LGA E 90 E 90 3.628 5 0.067 0.067 3.769 43.333 19.259 LGA L 91 L 91 3.896 4 0.138 0.138 4.597 37.381 18.690 LGA A 92 A 92 6.294 1 0.183 0.183 6.653 18.452 14.762 LGA D 93 D 93 5.761 4 0.022 0.022 5.761 26.310 13.155 LGA A 94 A 94 3.295 1 0.028 0.028 3.756 45.000 36.000 LGA I 95 I 95 5.313 4 0.056 0.056 6.300 25.476 12.738 LGA T 96 T 96 5.594 3 0.090 0.090 6.498 21.548 12.313 LGA E 97 E 97 5.691 5 0.024 0.024 7.219 18.690 8.307 LGA R 98 R 98 7.493 7 0.015 0.015 9.349 7.381 2.684 LGA F 99 F 99 9.026 7 0.028 0.028 10.503 1.667 0.606 LGA L 100 L 100 9.590 4 0.072 0.072 10.816 0.833 0.417 LGA E 101 E 101 10.178 5 0.030 0.030 11.921 0.119 0.053 LGA E 102 E 102 12.043 5 0.023 0.023 13.842 0.000 0.000 LGA A 103 A 103 13.167 1 0.046 0.046 14.826 0.000 0.000 LGA K 104 K 104 13.916 5 0.029 0.029 15.402 0.000 0.000 LGA S 105 S 105 15.013 2 0.076 0.076 16.893 0.000 0.000 LGA I 106 I 106 16.477 4 0.072 0.072 17.590 0.000 0.000 LGA G 107 G 107 17.035 0 0.079 0.079 17.164 0.000 0.000 LGA L 108 L 108 16.195 4 0.104 0.104 16.399 0.000 0.000 LGA D 109 D 109 15.524 4 0.033 0.033 15.850 0.000 0.000 LGA D 110 D 110 13.361 4 0.020 0.020 14.202 0.000 0.000 LGA Q 111 Q 111 13.788 5 0.028 0.028 13.849 0.000 0.000 LGA T 112 T 112 14.574 3 0.021 0.021 14.574 0.000 0.000 LGA A 113 A 113 13.091 1 0.041 0.041 13.667 0.000 0.000 LGA I 114 I 114 11.706 4 0.025 0.025 12.308 0.000 0.000 LGA E 115 E 115 12.397 5 0.029 0.029 12.507 0.000 0.000 LGA L 116 L 116 13.060 4 0.021 0.021 13.060 0.000 0.000 LGA L 117 L 117 11.152 4 0.020 0.020 11.854 0.000 0.000 LGA I 118 I 118 10.008 4 0.042 0.042 10.658 0.000 0.000 LGA K 119 K 119 12.239 5 0.055 0.055 12.352 0.000 0.000 LGA R 120 R 120 12.101 7 0.023 0.023 12.102 0.000 0.000 LGA S 121 S 121 10.028 2 0.083 0.083 10.714 0.000 0.000 LGA R 122 R 122 11.259 7 0.174 0.174 11.885 0.000 0.000 LGA N 123 N 123 13.156 4 0.334 0.334 13.156 0.119 0.060 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 111 444 444 100.00 888 444 50.00 119 SUMMARY(RMSD_GDC): 3.911 3.912 3.912 51.782 28.294 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 113 119 4.0 81 2.03 65.126 65.996 3.798 LGA_LOCAL RMSD: 2.033 Number of atoms: 81 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 6.521 Number of assigned atoms: 111 Std_ASGN_ATOMS RMSD: 3.911 Standard rmsd on all 111 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.252935 * X + -0.022084 * Y + 0.967231 * Z + -62.097012 Y_new = 0.910420 * X + 0.332832 * Y + 0.245678 * Z + -6.141033 Z_new = -0.327351 * X + 0.942728 * Y + -0.064079 * Z + -5.132825 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.841784 0.333499 1.638664 [DEG: 105.5265 19.1081 93.8885 ] ZXZ: 1.819537 1.634919 -0.334212 [DEG: 104.2518 93.6740 -19.1489 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0586TS328_1 REMARK 2: T0586.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0586TS328_1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 113 119 4.0 81 2.03 65.996 3.91 REMARK ---------------------------------------------------------- MOLECULE T0586TS328_1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0586 REMARK MODEL 1 REMARK PARENT 2ek5_C ATOM 1 N PRO 13 -1.227 8.319 -1.983 1.00 3.00 N ATOM 2 CA PRO 13 -0.923 8.831 -3.323 1.00 3.00 C ATOM 3 C PRO 13 0.480 9.417 -3.395 1.00 3.00 C ATOM 4 O PRO 13 0.981 9.960 -2.412 1.00 3.00 O ATOM 5 N ILE 14 1.100 9.316 -4.564 1.00 3.00 N ATOM 6 CA ILE 14 2.460 9.812 -4.764 1.00 3.00 C ATOM 7 C ILE 14 2.743 11.245 -4.299 1.00 3.00 C ATOM 8 O ILE 14 3.650 11.469 -3.494 1.00 3.00 O ATOM 9 N TYR 15 1.974 12.209 -4.798 1.00 3.00 N ATOM 10 CA TYR 15 2.204 13.605 -4.440 1.00 3.00 C ATOM 11 C TYR 15 2.154 13.894 -2.945 1.00 3.00 C ATOM 12 O TYR 15 2.832 14.804 -2.469 1.00 3.00 O ATOM 13 N SER 16 1.363 13.141 -2.194 1.00 3.00 N ATOM 14 CA SER 16 1.312 13.393 -0.764 1.00 3.00 C ATOM 15 C SER 16 2.370 12.591 -0.025 1.00 3.00 C ATOM 16 O SER 16 2.664 12.865 1.137 1.00 3.00 O ATOM 17 N GLN 17 2.951 11.608 -0.712 1.00 3.00 N ATOM 18 CA GLN 17 4.012 10.801 -0.124 1.00 3.00 C ATOM 19 C GLN 17 5.259 11.672 -0.046 1.00 3.00 C ATOM 20 O GLN 17 5.983 11.652 0.948 1.00 3.00 O ATOM 21 N ILE 18 5.497 12.444 -1.100 1.00 3.00 N ATOM 22 CA ILE 18 6.648 13.328 -1.145 1.00 3.00 C ATOM 23 C ILE 18 6.386 14.558 -0.279 1.00 3.00 C ATOM 24 O ILE 18 7.318 15.204 0.198 1.00 3.00 O ATOM 25 N SER 19 5.113 14.880 -0.081 1.00 3.00 N ATOM 26 CA SER 19 4.746 16.014 0.752 1.00 3.00 C ATOM 27 C SER 19 5.025 15.597 2.194 1.00 3.00 C ATOM 28 O SER 19 5.401 16.420 3.034 1.00 3.00 O ATOM 29 N ASP 20 4.846 14.307 2.468 1.00 3.00 N ATOM 30 CA ASP 20 5.087 13.768 3.801 1.00 3.00 C ATOM 31 C ASP 20 6.585 13.769 4.095 1.00 3.00 C ATOM 32 O ASP 20 7.007 13.925 5.246 1.00 3.00 O ATOM 33 N TRP 21 7.389 13.595 3.046 1.00 3.00 N ATOM 34 CA TRP 21 8.840 13.584 3.196 1.00 3.00 C ATOM 35 C TRP 21 9.343 14.977 3.558 1.00 3.00 C ATOM 36 O TRP 21 10.274 15.131 4.356 1.00 3.00 O ATOM 37 N MET 22 8.729 15.994 2.968 1.00 3.00 N ATOM 38 CA MET 22 9.105 17.361 3.280 1.00 3.00 C ATOM 39 C MET 22 8.719 17.612 4.742 1.00 3.00 C ATOM 40 O MET 22 9.495 18.179 5.515 1.00 3.00 O ATOM 41 N LYS 23 7.519 17.179 5.117 1.00 3.00 N ATOM 42 CA LYS 23 7.065 17.346 6.494 1.00 3.00 C ATOM 43 C LYS 23 8.062 16.648 7.423 1.00 3.00 C ATOM 44 O LYS 23 8.456 17.201 8.454 1.00 3.00 O ATOM 45 N LYS 24 8.484 15.440 7.053 1.00 3.00 N ATOM 46 CA LYS 24 9.455 14.712 7.864 1.00 3.00 C ATOM 47 C LYS 24 10.715 15.554 8.070 1.00 3.00 C ATOM 48 O LYS 24 11.232 15.634 9.180 1.00 3.00 O ATOM 49 N GLN 25 11.215 16.172 7.005 1.00 3.00 N ATOM 50 CA GLN 25 12.418 16.991 7.117 1.00 3.00 C ATOM 51 C GLN 25 12.196 18.179 8.038 1.00 3.00 C ATOM 52 O GLN 25 13.115 18.589 8.755 1.00 3.00 O ATOM 53 N MET 26 10.990 18.737 8.023 1.00 3.00 N ATOM 54 CA MET 26 10.712 19.867 8.893 1.00 3.00 C ATOM 55 C MET 26 10.793 19.362 10.329 1.00 3.00 C ATOM 56 O MET 26 11.462 19.978 11.165 1.00 3.00 O ATOM 57 N ILE 27 10.136 18.231 10.605 1.00 3.00 N ATOM 58 CA ILE 27 10.156 17.639 11.943 1.00 3.00 C ATOM 59 C ILE 27 11.604 17.329 12.350 1.00 3.00 C ATOM 60 O ILE 27 12.007 17.584 13.485 1.00 3.00 O ATOM 61 N THR 28 12.384 16.795 11.413 1.00 3.00 N ATOM 62 CA THR 28 13.776 16.456 11.683 1.00 3.00 C ATOM 63 C THR 28 14.660 17.688 11.865 1.00 3.00 C ATOM 64 O THR 28 15.755 17.584 12.415 1.00 3.00 O ATOM 65 N GLY 29 14.190 18.844 11.401 1.00 3.00 N ATOM 66 CA GLY 29 14.985 20.059 11.511 1.00 3.00 C ATOM 67 C GLY 29 15.928 20.147 10.323 1.00 3.00 C ATOM 68 O GLY 29 16.760 21.053 10.217 1.00 3.00 O ATOM 69 N GLU 30 15.801 19.167 9.433 1.00 3.00 N ATOM 70 CA GLU 30 16.605 19.092 8.221 1.00 3.00 C ATOM 71 C GLU 30 16.288 20.333 7.399 1.00 3.00 C ATOM 72 O GLU 30 17.144 20.870 6.689 1.00 3.00 O ATOM 73 N TRP 31 15.031 20.753 7.479 1.00 3.00 N ATOM 74 CA TRP 31 14.547 21.948 6.800 1.00 3.00 C ATOM 75 C TRP 31 14.113 22.863 7.931 1.00 3.00 C ATOM 76 O TRP 31 13.168 22.555 8.659 1.00 3.00 O ATOM 77 N LYS 32 14.813 23.979 8.084 1.00 3.00 N ATOM 78 CA LYS 32 14.525 24.929 9.153 1.00 3.00 C ATOM 79 C LYS 32 13.404 25.900 8.811 1.00 3.00 C ATOM 80 O LYS 32 13.069 26.102 7.634 1.00 3.00 O ATOM 81 N GLY 33 12.838 26.499 9.855 1.00 3.00 N ATOM 82 CA GLY 33 11.787 27.504 9.720 1.00 3.00 C ATOM 83 C GLY 33 12.338 28.600 8.817 1.00 3.00 C ATOM 84 O GLY 33 13.503 28.961 8.927 1.00 3.00 O ATOM 85 N GLU 34 11.499 29.129 7.937 1.00 3.00 N ATOM 86 CA GLU 34 11.906 30.192 7.031 1.00 3.00 C ATOM 87 C GLU 34 13.015 29.824 6.060 1.00 3.00 C ATOM 88 O GLU 34 13.641 30.696 5.475 1.00 3.00 O ATOM 89 N ASP 35 13.272 28.537 5.886 1.00 3.00 N ATOM 90 CA ASP 35 14.289 28.126 4.925 1.00 3.00 C ATOM 91 C ASP 35 13.566 27.895 3.593 1.00 3.00 C ATOM 92 O ASP 35 12.403 27.487 3.582 1.00 3.00 O ATOM 93 N LYS 36 14.224 28.181 2.477 1.00 3.00 N ATOM 94 CA LYS 36 13.604 27.945 1.171 1.00 3.00 C ATOM 95 C LYS 36 13.650 26.429 0.946 1.00 3.00 C ATOM 96 O LYS 36 14.671 25.793 1.207 1.00 3.00 O ATOM 97 N LEU 37 12.546 25.852 0.482 1.00 3.00 N ATOM 98 CA LEU 37 12.495 24.412 0.230 1.00 3.00 C ATOM 99 C LEU 37 12.941 24.130 -1.206 1.00 3.00 C ATOM 100 O LEU 37 12.906 25.023 -2.066 1.00 3.00 O ATOM 101 N PRO 38 13.370 22.884 -1.486 1.00 3.00 N ATOM 102 CA PRO 38 13.821 22.519 -2.836 1.00 3.00 C ATOM 103 C PRO 38 12.757 22.821 -3.888 1.00 3.00 C ATOM 104 O PRO 38 11.559 22.748 -3.614 1.00 3.00 O ATOM 105 N SER 39 13.205 23.158 -5.092 1.00 3.00 N ATOM 106 CA SER 39 12.292 23.479 -6.187 1.00 3.00 C ATOM 107 C SER 39 11.696 22.228 -6.827 1.00 3.00 C ATOM 108 O SER 39 12.245 21.131 -6.702 1.00 3.00 O ATOM 109 N VAL 40 10.568 22.397 -7.513 1.00 3.00 N ATOM 110 CA VAL 40 9.910 21.276 -8.171 1.00 3.00 C ATOM 111 C VAL 40 10.904 20.571 -9.078 1.00 3.00 C ATOM 112 O VAL 40 10.902 19.342 -9.176 1.00 3.00 O ATOM 113 N ARG 41 11.759 21.356 -9.726 1.00 3.00 N ATOM 114 CA ARG 41 12.771 20.817 -10.628 1.00 3.00 C ATOM 115 C ARG 41 13.775 19.932 -9.890 1.00 3.00 C ATOM 116 O ARG 41 13.998 18.785 -10.276 1.00 3.00 O ATOM 117 N GLU 42 14.376 20.456 -8.825 1.00 3.00 N ATOM 118 CA GLU 42 15.363 19.684 -8.076 1.00 3.00 C ATOM 119 C GLU 42 14.763 18.564 -7.224 1.00 3.00 C ATOM 120 O GLU 42 15.475 17.645 -6.815 1.00 3.00 O ATOM 121 N MET 43 13.463 18.639 -6.952 1.00 3.00 N ATOM 122 CA MET 43 12.803 17.592 -6.180 1.00 3.00 C ATOM 123 C MET 43 12.635 16.378 -7.080 1.00 3.00 C ATOM 124 O MET 43 13.029 15.264 -6.732 1.00 3.00 O ATOM 125 N GLY 44 12.051 16.612 -8.252 1.00 3.00 N ATOM 126 CA GLY 44 11.811 15.555 -9.230 1.00 3.00 C ATOM 127 C GLY 44 13.116 14.850 -9.573 1.00 3.00 C ATOM 128 O GLY 44 13.266 13.642 -9.354 1.00 3.00 O ATOM 129 N VAL 45 14.051 15.612 -10.126 1.00 3.00 N ATOM 130 CA VAL 45 15.347 15.100 -10.524 1.00 3.00 C ATOM 131 C VAL 45 15.986 14.277 -9.431 1.00 3.00 C ATOM 132 O VAL 45 16.850 13.415 -9.669 1.00 3.00 O ATOM 133 N LYS 46 15.579 14.527 -8.211 1.00 3.00 N ATOM 134 CA LYS 46 16.162 13.813 -7.099 1.00 3.00 C ATOM 135 C LYS 46 15.341 12.640 -6.608 1.00 3.00 C ATOM 136 O LYS 46 15.884 11.650 -6.103 1.00 3.00 O ATOM 137 N LEU 47 14.038 12.717 -6.795 1.00 3.00 N ATOM 138 CA LEU 47 13.193 11.636 -6.352 1.00 3.00 C ATOM 139 C LEU 47 12.711 10.768 -7.504 1.00 3.00 C ATOM 140 O LEU 47 11.883 9.873 -7.307 1.00 3.00 O ATOM 141 N ALA 48 13.246 11.018 -8.704 1.00 3.00 N ATOM 142 CA ALA 48 12.900 10.205 -9.899 1.00 3.00 C ATOM 143 C ALA 48 11.417 10.331 -10.105 1.00 3.00 C ATOM 144 O ALA 48 10.721 9.353 -10.266 1.00 3.00 O ATOM 145 N VAL 49 10.950 11.558 -10.092 1.00 3.00 N ATOM 146 CA VAL 49 9.541 11.782 -10.199 1.00 3.00 C ATOM 147 C VAL 49 9.369 12.864 -11.213 1.00 3.00 C ATOM 148 O VAL 49 10.344 13.458 -11.673 1.00 3.00 O ATOM 149 N ASN 50 8.127 13.088 -11.596 1.00 3.00 N ATOM 150 CA ASN 50 7.816 14.125 -12.553 1.00 3.00 C ATOM 151 C ASN 50 7.527 15.406 -11.779 1.00 3.00 C ATOM 152 O ASN 50 6.798 15.396 -10.785 1.00 3.00 O ATOM 153 N PRO 51 8.101 16.530 -12.228 1.00 3.00 N ATOM 154 CA PRO 51 7.905 17.826 -11.572 1.00 3.00 C ATOM 155 C PRO 51 6.454 18.123 -11.193 1.00 3.00 C ATOM 156 O PRO 51 6.191 18.870 -10.247 1.00 3.00 O ATOM 157 N ASN 52 5.515 17.537 -11.931 1.00 3.00 N ATOM 158 CA ASN 52 4.098 17.741 -11.656 1.00 3.00 C ATOM 159 C ASN 52 3.779 17.245 -10.248 1.00 3.00 C ATOM 160 O ASN 52 3.200 17.973 -9.443 1.00 3.00 O ATOM 161 N THR 53 4.161 16.003 -9.962 1.00 3.00 N ATOM 162 CA THR 53 3.931 15.396 -8.654 1.00 3.00 C ATOM 163 C THR 53 4.485 16.294 -7.549 1.00 3.00 C ATOM 164 O THR 53 3.773 16.653 -6.603 1.00 3.00 O ATOM 165 N VAL 54 5.765 16.638 -7.673 1.00 3.00 N ATOM 166 CA VAL 54 6.421 17.499 -6.704 1.00 3.00 C ATOM 167 C VAL 54 5.552 18.727 -6.491 1.00 3.00 C ATOM 168 O VAL 54 5.189 19.053 -5.367 1.00 3.00 O ATOM 169 N SER 55 5.205 19.391 -7.589 1.00 3.00 N ATOM 170 CA SER 55 4.380 20.588 -7.530 1.00 3.00 C ATOM 171 C SER 55 3.084 20.315 -6.768 1.00 3.00 C ATOM 172 O SER 55 2.646 21.133 -5.954 1.00 3.00 O ATOM 173 N ARG 56 2.473 19.165 -7.033 1.00 3.00 N ATOM 174 CA ARG 56 1.235 18.789 -6.358 1.00 3.00 C ATOM 175 C ARG 56 1.496 18.688 -4.861 1.00 3.00 C ATOM 176 O ARG 56 0.734 19.215 -4.050 1.00 3.00 O ATOM 177 N ALA 57 2.586 18.007 -4.508 1.00 3.00 N ATOM 178 CA ALA 57 2.957 17.859 -3.112 1.00 3.00 C ATOM 179 C ALA 57 3.163 19.211 -2.458 1.00 3.00 C ATOM 180 O ALA 57 2.593 19.481 -1.405 1.00 3.00 O ATOM 181 N TYR 58 3.967 20.068 -3.088 1.00 3.00 N ATOM 182 CA TYR 58 4.237 21.402 -2.556 1.00 3.00 C ATOM 183 C TYR 58 2.962 22.221 -2.370 1.00 3.00 C ATOM 184 O TYR 58 2.779 22.882 -1.346 1.00 3.00 O ATOM 185 N GLN 59 2.080 22.176 -3.364 1.00 3.00 N ATOM 186 CA GLN 59 0.829 22.928 -3.303 1.00 3.00 C ATOM 187 C GLN 59 0.010 22.465 -2.105 1.00 3.00 C ATOM 188 O GLN 59 -0.535 23.275 -1.355 1.00 3.00 O ATOM 189 N GLU 60 -0.063 21.152 -1.928 1.00 3.00 N ATOM 190 CA GLU 60 -0.801 20.567 -0.814 1.00 3.00 C ATOM 191 C GLU 60 -0.282 21.190 0.486 1.00 3.00 C ATOM 192 O GLU 60 -1.056 21.576 1.367 1.00 3.00 O ATOM 193 N LEU 61 1.039 21.307 0.583 1.00 3.00 N ATOM 194 CA LEU 61 1.665 21.880 1.767 1.00 3.00 C ATOM 195 C LEU 61 1.393 23.369 1.932 1.00 3.00 C ATOM 196 O LEU 61 1.157 23.841 3.050 1.00 3.00 O ATOM 197 N GLU 62 1.433 24.116 0.833 1.00 3.00 N ATOM 198 CA GLU 62 1.177 25.547 0.915 1.00 3.00 C ATOM 199 C GLU 62 -0.273 25.788 1.330 1.00 3.00 C ATOM 200 O GLU 62 -0.560 26.680 2.128 1.00 3.00 O ATOM 201 N ARG 63 -1.183 24.980 0.791 1.00 3.00 N ATOM 202 CA ARG 63 -2.596 25.105 1.129 1.00 3.00 C ATOM 203 C ARG 63 -2.789 24.814 2.618 1.00 3.00 C ATOM 204 O ARG 63 -3.554 25.491 3.301 1.00 3.00 O ATOM 205 N ALA 64 -2.082 23.807 3.120 1.00 3.00 N ATOM 206 CA ALA 64 -2.188 23.437 4.528 1.00 3.00 C ATOM 207 C ALA 64 -1.544 24.494 5.432 1.00 3.00 C ATOM 208 O ALA 64 -1.692 24.463 6.658 1.00 3.00 O ATOM 209 N GLY 65 -0.820 25.425 4.821 1.00 3.00 N ATOM 210 CA GLY 65 -0.172 26.479 5.583 1.00 3.00 C ATOM 211 C GLY 65 1.189 26.084 6.123 1.00 3.00 C ATOM 212 O GLY 65 1.842 26.869 6.811 1.00 3.00 O ATOM 213 N TYR 66 1.623 24.866 5.818 1.00 3.00 N ATOM 214 CA TYR 66 2.920 24.376 6.287 1.00 3.00 C ATOM 215 C TYR 66 4.057 25.121 5.577 1.00 3.00 C ATOM 216 O TYR 66 5.120 25.358 6.150 1.00 3.00 O ATOM 217 N ILE 67 3.808 25.480 4.323 1.00 3.00 N ATOM 218 CA ILE 67 4.762 26.198 3.493 1.00 3.00 C ATOM 219 C ILE 67 4.088 27.506 3.059 1.00 3.00 C ATOM 220 O ILE 67 2.857 27.580 2.973 1.00 3.00 O ATOM 221 N TYR 68 4.890 28.537 2.805 1.00 3.00 N ATOM 222 CA TYR 68 4.358 29.817 2.349 1.00 3.00 C ATOM 223 C TYR 68 5.237 30.367 1.232 1.00 3.00 C ATOM 224 O TYR 68 6.420 30.026 1.117 1.00 3.00 O ATOM 225 N ALA 69 4.656 31.220 0.402 1.00 3.00 N ATOM 226 CA ALA 69 5.393 31.784 -0.717 1.00 3.00 C ATOM 227 C ALA 69 5.799 33.232 -0.551 1.00 3.00 C ATOM 228 O ALA 69 5.058 34.037 0.016 1.00 3.00 O ATOM 229 N LYS 70 6.998 33.548 -1.031 1.00 3.00 N ATOM 230 CA LYS 70 7.478 34.924 -1.034 1.00 3.00 C ATOM 231 C LYS 70 7.433 35.236 -2.525 1.00 3.00 C ATOM 232 O LYS 70 8.106 34.580 -3.322 1.00 3.00 O ATOM 233 N ARG 71 6.617 36.214 -2.897 1.00 3.00 N ATOM 234 CA ARG 71 6.447 36.588 -4.297 1.00 3.00 C ATOM 235 C ARG 71 7.709 36.457 -5.145 1.00 3.00 C ATOM 236 O ARG 71 8.726 37.091 -4.868 1.00 3.00 O ATOM 237 N GLY 72 7.629 35.614 -6.173 1.00 3.00 N ATOM 238 CA GLY 72 8.740 35.405 -7.091 1.00 3.00 C ATOM 239 C GLY 72 10.027 34.745 -6.611 1.00 3.00 C ATOM 240 O GLY 72 10.923 34.507 -7.425 1.00 3.00 O ATOM 241 N MET 73 10.131 34.425 -5.321 1.00 3.00 N ATOM 242 CA MET 73 11.355 33.820 -4.804 1.00 3.00 C ATOM 243 C MET 73 11.281 32.346 -4.415 1.00 3.00 C ATOM 244 O MET 73 12.309 31.678 -4.351 1.00 3.00 O ATOM 245 N GLY 74 10.086 31.832 -4.151 1.00 3.00 N ATOM 246 CA GLY 74 9.981 30.427 -3.790 1.00 3.00 C ATOM 247 C GLY 74 9.107 30.122 -2.586 1.00 3.00 C ATOM 248 O GLY 74 8.465 31.006 -2.021 1.00 3.00 O ATOM 249 N SER 75 9.077 28.853 -2.200 1.00 3.00 N ATOM 250 CA SER 75 8.283 28.420 -1.053 1.00 3.00 C ATOM 251 C SER 75 9.193 28.206 0.154 1.00 3.00 C ATOM 252 O SER 75 10.280 27.628 0.038 1.00 3.00 O ATOM 253 N PHE 76 8.731 28.678 1.308 1.00 3.00 N ATOM 254 CA PHE 76 9.486 28.600 2.559 1.00 3.00 C ATOM 255 C PHE 76 8.708 27.906 3.669 1.00 3.00 C ATOM 256 O PHE 76 7.474 27.880 3.661 1.00 3.00 O ATOM 257 N VAL 77 9.442 27.369 4.639 1.00 3.00 N ATOM 258 CA VAL 77 8.834 26.691 5.778 1.00 3.00 C ATOM 259 C VAL 77 8.251 27.718 6.743 1.00 3.00 C ATOM 260 O VAL 77 8.980 28.546 7.276 1.00 3.00 O ATOM 261 N THR 78 6.942 27.667 6.975 1.00 3.00 N ATOM 262 CA THR 78 6.323 28.613 7.904 1.00 3.00 C ATOM 263 C THR 78 7.261 28.754 9.060 1.00 3.00 C ATOM 264 O THR 78 7.610 29.871 9.447 1.00 3.00 O ATOM 265 N SER 79 7.762 27.634 9.587 1.00 3.00 N ATOM 266 CA SER 79 7.477 26.268 9.149 1.00 3.00 C ATOM 267 C SER 79 6.241 25.561 9.691 1.00 3.00 C ATOM 268 O SER 79 6.112 24.344 9.513 1.00 3.00 O ATOM 269 N ASP 80 5.362 26.313 10.382 1.00 3.00 N ATOM 270 CA ASP 80 4.100 25.795 10.944 1.00 3.00 C ATOM 271 C ASP 80 4.290 24.579 11.849 1.00 3.00 C ATOM 272 O ASP 80 3.723 23.515 11.594 1.00 3.00 O ATOM 273 N LYS 81 5.056 24.734 12.954 1.00 3.00 N ATOM 274 CA LYS 81 5.313 23.637 13.877 1.00 3.00 C ATOM 275 C LYS 81 4.113 22.896 14.462 1.00 3.00 C ATOM 276 O LYS 81 4.208 21.701 14.704 1.00 3.00 O ATOM 277 N ALA 82 2.994 23.593 14.707 1.00 3.00 N ATOM 278 CA ALA 82 1.800 22.953 15.259 1.00 3.00 C ATOM 279 C ALA 82 0.864 22.382 14.180 1.00 3.00 C ATOM 280 O ALA 82 -0.143 21.731 14.498 1.00 3.00 O ATOM 281 N LEU 83 1.229 22.589 12.924 1.00 3.00 N ATOM 282 CA LEU 83 0.423 22.169 11.785 1.00 3.00 C ATOM 283 C LEU 83 0.641 20.700 11.433 1.00 3.00 C ATOM 284 O LEU 83 -0.316 19.933 11.274 1.00 3.00 O ATOM 285 N PHE 84 1.914 20.319 11.327 1.00 3.00 N ATOM 286 CA PHE 84 2.283 18.948 11.009 1.00 3.00 C ATOM 287 C PHE 84 1.972 18.000 12.168 1.00 3.00 C ATOM 288 O PHE 84 1.561 16.864 11.946 1.00 3.00 O ATOM 289 N ASP 85 2.162 18.457 13.403 1.00 3.00 N ATOM 290 CA ASP 85 1.863 17.597 14.545 1.00 3.00 C ATOM 291 C ASP 85 0.342 17.407 14.599 1.00 3.00 C ATOM 292 O ASP 85 -0.149 16.324 14.916 1.00 3.00 O ATOM 293 N GLN 86 -0.402 18.458 14.267 1.00 3.00 N ATOM 294 CA GLN 86 -1.856 18.385 14.283 1.00 3.00 C ATOM 295 C GLN 86 -2.374 17.405 13.234 1.00 3.00 C ATOM 296 O GLN 86 -3.230 16.565 13.528 1.00 3.00 O ATOM 297 N LEU 87 -1.851 17.510 12.014 1.00 3.00 N ATOM 298 CA LEU 87 -2.282 16.629 10.936 1.00 3.00 C ATOM 299 C LEU 87 -2.239 15.329 11.750 1.00 3.00 C ATOM 300 O LEU 87 -2.904 14.343 11.445 1.00 3.00 O ATOM 301 N LYS 88 -1.450 15.351 12.815 1.00 3.00 N ATOM 302 CA LYS 88 -1.289 14.297 13.806 1.00 3.00 C ATOM 303 C LYS 88 -2.549 13.505 14.113 1.00 3.00 C ATOM 304 O LYS 88 -2.611 12.274 14.127 1.00 3.00 O ATOM 305 N LYS 89 -3.553 14.367 14.326 1.00 3.00 N ATOM 306 CA LYS 89 -4.884 14.024 14.743 1.00 3.00 C ATOM 307 C LYS 89 -5.749 13.262 13.767 1.00 3.00 C ATOM 308 O LYS 89 -6.564 12.471 14.214 1.00 3.00 O ATOM 309 N GLU 90 -5.605 13.413 12.457 1.00 3.00 N ATOM 310 CA GLU 90 -6.425 12.686 11.490 1.00 3.00 C ATOM 311 C GLU 90 -6.108 11.174 11.499 1.00 3.00 C ATOM 312 O GLU 90 -6.910 10.296 11.171 1.00 3.00 O ATOM 313 N LEU 91 -4.930 10.853 12.019 1.00 3.00 N ATOM 314 CA LEU 91 -4.542 9.483 12.304 1.00 3.00 C ATOM 315 C LEU 91 -5.376 8.758 13.392 1.00 3.00 C ATOM 316 O LEU 91 -5.351 7.521 13.550 1.00 3.00 O ATOM 317 N ALA 92 -6.088 9.596 14.189 1.00 3.00 N ATOM 318 CA ALA 92 -6.977 9.197 15.274 1.00 3.00 C ATOM 319 C ALA 92 -7.849 8.449 14.268 1.00 3.00 C ATOM 320 O ALA 92 -8.602 7.550 14.634 1.00 3.00 O ATOM 321 N ASP 93 -7.733 8.829 12.999 1.00 3.00 N ATOM 322 CA ASP 93 -8.524 8.220 11.936 1.00 3.00 C ATOM 323 C ASP 93 -8.139 6.779 11.661 1.00 3.00 C ATOM 324 O ASP 93 -8.990 5.943 11.348 1.00 3.00 O ATOM 325 N ALA 94 -6.852 6.487 11.773 1.00 3.00 N ATOM 326 CA ALA 94 -6.380 5.146 11.496 1.00 3.00 C ATOM 327 C ALA 94 -6.579 4.149 12.630 1.00 3.00 C ATOM 328 O ALA 94 -7.012 3.025 12.383 1.00 3.00 O ATOM 329 N ILE 95 -6.289 4.541 13.865 1.00 3.00 N ATOM 330 CA ILE 95 -6.427 3.601 14.974 1.00 3.00 C ATOM 331 C ILE 95 -7.539 3.849 15.975 1.00 3.00 C ATOM 332 O ILE 95 -8.175 2.912 16.444 1.00 3.00 O ATOM 333 N THR 96 -7.790 5.103 16.308 1.00 3.00 N ATOM 334 CA THR 96 -8.820 5.390 17.294 1.00 3.00 C ATOM 335 C THR 96 -10.245 5.277 16.776 1.00 3.00 C ATOM 336 O THR 96 -11.044 4.534 17.341 1.00 3.00 O ATOM 337 N GLU 97 -10.564 5.990 15.702 1.00 3.00 N ATOM 338 CA GLU 97 -11.912 5.961 15.135 1.00 3.00 C ATOM 339 C GLU 97 -12.460 4.546 14.938 1.00 3.00 C ATOM 340 O GLU 97 -13.579 4.246 15.353 1.00 3.00 O ATOM 341 N ARG 98 -11.685 3.653 14.299 1.00 3.00 N ATOM 342 CA ARG 98 -12.206 2.295 14.107 1.00 3.00 C ATOM 343 C ARG 98 -12.394 1.542 15.430 1.00 3.00 C ATOM 344 O ARG 98 -13.370 0.812 15.595 1.00 3.00 O ATOM 345 N PHE 99 -11.472 1.724 16.370 1.00 3.00 N ATOM 346 CA PHE 99 -11.591 1.068 17.675 1.00 3.00 C ATOM 347 C PHE 99 -12.918 1.463 18.337 1.00 3.00 C ATOM 348 O PHE 99 -13.635 0.614 18.874 1.00 3.00 O ATOM 349 N LEU 100 -13.236 2.756 18.286 1.00 3.00 N ATOM 350 CA LEU 100 -14.468 3.274 18.877 1.00 3.00 C ATOM 351 C LEU 100 -15.720 2.709 18.209 1.00 3.00 C ATOM 352 O LEU 100 -16.626 2.238 18.889 1.00 3.00 O ATOM 353 N GLU 101 -15.771 2.744 16.882 1.00 3.00 N ATOM 354 CA GLU 101 -16.939 2.243 16.173 1.00 3.00 C ATOM 355 C GLU 101 -17.148 0.734 16.357 1.00 3.00 C ATOM 356 O GLU 101 -18.291 0.269 16.479 1.00 3.00 O ATOM 357 N GLU 102 -16.057 -0.029 16.371 1.00 3.00 N ATOM 358 CA GLU 102 -16.155 -1.470 16.574 1.00 3.00 C ATOM 359 C GLU 102 -16.593 -1.705 18.017 1.00 3.00 C ATOM 360 O GLU 102 -17.387 -2.595 18.299 1.00 3.00 O ATOM 361 N ALA 103 -16.062 -0.893 18.923 1.00 3.00 N ATOM 362 CA ALA 103 -16.388 -0.989 20.343 1.00 3.00 C ATOM 363 C ALA 103 -17.895 -0.817 20.588 1.00 3.00 C ATOM 364 O ALA 103 -18.505 -1.547 21.375 1.00 3.00 O ATOM 365 N LYS 104 -18.500 0.136 19.896 1.00 3.00 N ATOM 366 CA LYS 104 -19.926 0.380 20.055 1.00 3.00 C ATOM 367 C LYS 104 -20.730 -0.768 19.468 1.00 3.00 C ATOM 368 O LYS 104 -21.699 -1.226 20.066 1.00 3.00 O ATOM 369 N SER 105 -20.307 -1.254 18.308 1.00 3.00 N ATOM 370 CA SER 105 -20.988 -2.366 17.657 1.00 3.00 C ATOM 371 C SER 105 -20.983 -3.627 18.529 1.00 3.00 C ATOM 372 O SER 105 -21.948 -4.394 18.510 1.00 3.00 O ATOM 373 N ILE 106 -19.916 -3.835 19.300 1.00 3.00 N ATOM 374 CA ILE 106 -19.826 -5.017 20.159 1.00 3.00 C ATOM 375 C ILE 106 -20.394 -4.805 21.556 1.00 3.00 C ATOM 376 O ILE 106 -20.412 -5.724 22.366 1.00 3.00 O ATOM 377 N GLY 107 -20.838 -3.587 21.842 1.00 3.00 N ATOM 378 CA GLY 107 -21.423 -3.315 23.142 1.00 3.00 C ATOM 379 C GLY 107 -20.450 -3.082 24.285 1.00 3.00 C ATOM 380 O GLY 107 -20.706 -3.495 25.414 1.00 3.00 O ATOM 381 N LEU 108 -19.337 -2.417 23.994 1.00 3.00 N ATOM 382 CA LEU 108 -18.340 -2.111 25.009 1.00 3.00 C ATOM 383 C LEU 108 -18.524 -0.674 25.450 1.00 3.00 C ATOM 384 O LEU 108 -18.688 0.217 24.625 1.00 3.00 O ATOM 385 N ASP 109 -18.491 -0.445 26.751 1.00 3.00 N ATOM 386 CA ASP 109 -18.624 0.910 27.271 1.00 3.00 C ATOM 387 C ASP 109 -17.282 1.633 27.103 1.00 3.00 C ATOM 388 O ASP 109 -16.220 0.993 27.074 1.00 3.00 O ATOM 389 N ASP 110 -17.316 2.958 26.999 1.00 3.00 N ATOM 390 CA ASP 110 -16.075 3.712 26.845 1.00 3.00 C ATOM 391 C ASP 110 -15.105 3.397 27.985 1.00 3.00 C ATOM 392 O ASP 110 -13.898 3.265 27.769 1.00 3.00 O ATOM 393 N GLN 111 -15.644 3.263 29.194 1.00 3.00 N ATOM 394 CA GLN 111 -14.830 2.958 30.366 1.00 3.00 C ATOM 395 C GLN 111 -14.099 1.640 30.165 1.00 3.00 C ATOM 396 O GLN 111 -12.924 1.507 30.514 1.00 3.00 O ATOM 397 N THR 112 -14.796 0.667 29.593 1.00 3.00 N ATOM 398 CA THR 112 -14.204 -0.644 29.365 1.00 3.00 C ATOM 399 C THR 112 -13.037 -0.524 28.394 1.00 3.00 C ATOM 400 O THR 112 -12.014 -1.176 28.555 1.00 3.00 O ATOM 401 N ALA 113 -13.195 0.322 27.390 1.00 3.00 N ATOM 402 CA ALA 113 -12.146 0.514 26.407 1.00 3.00 C ATOM 403 C ALA 113 -10.906 1.173 27.019 1.00 3.00 C ATOM 404 O ALA 113 -9.792 0.811 26.661 1.00 3.00 O ATOM 405 N ILE 114 -11.087 2.120 27.945 1.00 3.00 N ATOM 406 CA ILE 114 -9.938 2.747 28.614 1.00 3.00 C ATOM 407 C ILE 114 -9.178 1.666 29.376 1.00 3.00 C ATOM 408 O ILE 114 -7.945 1.620 29.361 1.00 3.00 O ATOM 409 N GLU 115 -9.922 0.792 30.046 1.00 3.00 N ATOM 410 CA GLU 115 -9.306 -0.284 30.811 1.00 3.00 C ATOM 411 C GLU 115 -8.586 -1.267 29.872 1.00 3.00 C ATOM 412 O GLU 115 -7.520 -1.801 30.198 1.00 3.00 O ATOM 413 N LEU 116 -9.169 -1.505 28.704 1.00 3.00 N ATOM 414 CA LEU 116 -8.555 -2.416 27.745 1.00 3.00 C ATOM 415 C LEU 116 -7.245 -1.806 27.225 1.00 3.00 C ATOM 416 O LEU 116 -6.258 -2.513 26.996 1.00 3.00 O ATOM 417 N LEU 117 -7.242 -0.494 27.021 1.00 3.00 N ATOM 418 CA LEU 117 -6.030 0.172 26.568 1.00 3.00 C ATOM 419 C LEU 117 -4.903 -0.159 27.543 1.00 3.00 C ATOM 420 O LEU 117 -3.801 -0.551 27.131 1.00 3.00 O ATOM 421 N ILE 118 -5.181 -0.026 28.838 1.00 3.00 N ATOM 422 CA ILE 118 -4.160 -0.312 29.841 1.00 3.00 C ATOM 423 C ILE 118 -3.822 -1.798 29.962 1.00 3.00 C ATOM 424 O ILE 118 -2.661 -2.156 30.170 1.00 3.00 O ATOM 425 N LYS 119 -4.827 -2.658 29.829 1.00 3.00 N ATOM 426 CA LYS 119 -4.603 -4.097 29.926 1.00 3.00 C ATOM 427 C LYS 119 -3.615 -4.501 28.851 1.00 3.00 C ATOM 428 O LYS 119 -2.602 -5.124 29.138 1.00 3.00 O ATOM 429 N ARG 120 -3.915 -4.131 27.610 1.00 3.00 N ATOM 430 CA ARG 120 -3.039 -4.456 26.494 1.00 3.00 C ATOM 431 C ARG 120 -1.649 -3.843 26.680 1.00 3.00 C ATOM 432 O ARG 120 -0.646 -4.476 26.348 1.00 3.00 O ATOM 433 N SER 121 -1.578 -2.628 27.223 1.00 3.00 N ATOM 434 CA SER 121 -0.282 -1.997 27.445 1.00 3.00 C ATOM 435 C SER 121 0.491 -2.835 28.459 1.00 3.00 C ATOM 436 O SER 121 1.652 -3.166 28.257 1.00 3.00 O ATOM 437 N ARG 122 -0.168 -3.181 29.553 1.00 3.00 N ATOM 438 CA ARG 122 0.467 -3.988 30.576 1.00 3.00 C ATOM 439 C ARG 122 0.871 -5.374 30.076 1.00 3.00 C ATOM 440 O ARG 122 1.914 -5.891 30.477 1.00 3.00 O ATOM 441 N ASN 123 0.069 -5.972 29.194 1.00 3.00 N ATOM 442 CA ASN 123 0.407 -7.303 28.685 1.00 3.00 C ATOM 443 C ASN 123 1.742 -7.238 27.950 1.00 3.00 C ATOM 444 O ASN 123 2.506 -8.200 27.953 1.00 3.00 O ATOM 445 N HIS 124 2.016 -6.090 27.324 1.00 3.00 N ATOM 446 CA HIS 124 3.267 -5.864 26.600 1.00 3.00 C ATOM 447 C HIS 124 4.407 -5.451 27.545 1.00 3.00 C ATOM 448 O HIS 124 5.561 -5.342 27.131 1.00 3.00 O ATOM 449 N GLU 125 4.087 -5.204 28.809 1.00 3.00 N ATOM 450 CA GLU 125 5.130 -4.830 29.749 1.00 3.00 C ATOM 451 C GLU 125 5.095 -3.390 30.237 1.00 3.00 C ATOM 452 O GLU 125 5.877 -3.013 31.108 1.00 3.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 444 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 22.89 93.6 220 93.2 236 ARMSMC SECONDARY STRUCTURE . . 12.54 97.5 160 100.0 160 ARMSMC SURFACE . . . . . . . . 22.12 91.9 160 90.9 176 ARMSMC BURIED . . . . . . . . 24.82 98.3 60 100.0 60 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 102 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 97 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 71 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 77 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 25 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 83 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 68 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 58 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 65 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 18 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 38 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 33 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 30 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 32 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 19 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 19 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 14 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 18 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 1 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 3.91 (Number of atoms: 111) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 3.91 111 93.3 119 CRMSCA CRN = ALL/NP . . . . . 0.0352 CRMSCA SECONDARY STRUCTURE . . 3.73 80 100.0 80 CRMSCA SURFACE . . . . . . . . 4.11 81 91.0 89 CRMSCA BURIED . . . . . . . . 3.32 30 100.0 30 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 3.91 444 75.5 588 CRMSMC SECONDARY STRUCTURE . . 3.77 320 80.4 398 CRMSMC SURFACE . . . . . . . . 4.09 324 73.6 440 CRMSMC BURIED . . . . . . . . 3.40 120 81.1 148 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 0.00 0 0.0 477 CRMSSC RELIABLE SIDE CHAINS . 0.00 0 0.0 425 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 335 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 355 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 122 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 3.91 444 46.6 953 CRMSALL SECONDARY STRUCTURE . . 3.77 320 48.9 655 CRMSALL SURFACE . . . . . . . . 4.09 324 45.6 711 CRMSALL BURIED . . . . . . . . 3.40 120 49.6 242 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.349 0.205 0.153 111 93.3 119 ERRCA SECONDARY STRUCTURE . . 1.249 0.200 0.157 80 100.0 80 ERRCA SURFACE . . . . . . . . 1.416 0.202 0.138 81 91.0 89 ERRCA BURIED . . . . . . . . 1.169 0.215 0.195 30 100.0 30 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.344 0.204 0.154 444 75.5 588 ERRMC SECONDARY STRUCTURE . . 1.266 0.201 0.157 320 80.4 398 ERRMC SURFACE . . . . . . . . 1.397 0.200 0.138 324 73.6 440 ERRMC BURIED . . . . . . . . 1.202 0.217 0.198 120 81.1 148 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.000 0.000 0.000 0 0.0 477 ERRSC RELIABLE SIDE CHAINS . 0.000 0.000 0.000 0 0.0 425 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 335 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 355 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 122 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.344 0.204 0.154 444 46.6 953 ERRALL SECONDARY STRUCTURE . . 1.266 0.201 0.157 320 48.9 655 ERRALL SURFACE . . . . . . . . 1.397 0.200 0.138 324 45.6 711 ERRALL BURIED . . . . . . . . 1.202 0.217 0.198 120 49.6 242 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 5 20 40 93 111 111 119 DISTCA CA (P) 4.20 16.81 33.61 78.15 93.28 119 DISTCA CA (RMS) 0.86 1.42 2.07 3.35 3.91 DISTCA ALL (N) 15 79 160 363 444 444 953 DISTALL ALL (P) 1.57 8.29 16.79 38.09 46.59 953 DISTALL ALL (RMS) 0.79 1.39 2.08 3.30 3.91 DISTALL END of the results output