####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 39 ( 313), selected 39 , name T0586TS314_1-D2 # Molecule2: number of CA atoms 39 ( 313), selected 39 , name T0586-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0586TS314_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 39 85 - 123 2.47 2.47 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 32 89 - 120 1.97 2.66 LCS_AVERAGE: 78.30 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 93 - 109 0.99 3.66 LCS_AVERAGE: 38.53 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 39 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT D 85 D 85 10 14 39 4 12 16 23 29 33 34 36 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT Q 86 Q 86 10 14 39 4 13 17 19 23 29 33 36 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 87 L 87 10 17 39 5 8 9 10 12 19 26 32 34 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 88 K 88 10 30 39 4 8 14 21 27 32 34 36 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 89 K 89 10 32 39 5 10 17 24 29 33 34 36 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 90 E 90 10 32 39 7 14 17 23 29 33 34 36 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 91 L 91 10 32 39 5 8 9 21 27 33 34 36 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 92 A 92 10 32 39 5 8 9 12 18 29 34 36 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT D 93 D 93 17 32 39 5 9 16 21 25 32 34 36 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 94 A 94 17 32 39 5 11 16 24 29 33 34 36 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 95 I 95 17 32 39 5 11 16 24 29 33 34 36 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT T 96 T 96 17 32 39 5 11 16 24 29 33 34 36 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 97 E 97 17 32 39 5 11 16 24 29 33 34 36 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT R 98 R 98 17 32 39 5 11 17 24 29 33 34 36 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT F 99 F 99 17 32 39 5 11 17 24 29 33 34 36 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 100 L 100 17 32 39 4 11 16 24 29 33 34 36 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 101 E 101 17 32 39 4 11 16 24 29 33 34 36 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 102 E 102 17 32 39 4 14 17 24 29 33 34 36 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 103 A 103 17 32 39 8 14 17 24 29 33 34 36 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 104 K 104 17 32 39 5 12 17 24 29 33 34 36 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT S 105 S 105 17 32 39 6 14 17 24 29 33 34 36 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 106 I 106 17 32 39 8 14 17 24 29 33 34 36 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT G 107 G 107 17 32 39 8 14 17 24 29 33 34 36 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 108 L 108 17 32 39 8 14 17 24 29 33 34 36 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT D 109 D 109 17 32 39 8 14 17 24 29 33 34 36 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT D 110 D 110 16 32 39 8 14 17 24 29 33 34 36 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT Q 111 Q 111 16 32 39 8 14 17 24 29 33 34 36 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT T 112 T 112 16 32 39 8 14 17 24 29 33 34 36 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 113 A 113 16 32 39 4 14 17 24 29 33 34 36 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 114 I 114 16 32 39 7 14 17 24 29 33 34 36 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 115 E 115 16 32 39 6 14 17 24 29 33 34 36 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 116 L 116 16 32 39 6 13 17 24 29 33 34 36 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 117 L 117 15 32 39 6 13 14 23 29 33 34 36 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 118 I 118 15 32 39 6 13 14 23 29 33 34 36 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 119 K 119 15 32 39 5 13 14 23 29 33 34 36 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT R 120 R 120 15 32 39 5 13 14 21 29 33 34 36 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT S 121 S 121 15 31 39 6 13 14 21 29 33 34 36 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT R 122 R 122 15 31 39 4 13 14 21 29 33 34 36 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT N 123 N 123 15 30 39 3 3 10 13 17 29 34 36 38 39 39 39 39 39 39 39 39 39 39 39 LCS_AVERAGE LCS_A: 72.28 ( 38.53 78.30 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 14 17 24 29 33 34 36 38 39 39 39 39 39 39 39 39 39 39 39 GDT PERCENT_AT 20.51 35.90 43.59 61.54 74.36 84.62 87.18 92.31 97.44 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.29 0.67 0.83 1.32 1.77 1.93 2.01 2.16 2.35 2.47 2.47 2.47 2.47 2.47 2.47 2.47 2.47 2.47 2.47 2.47 GDT RMS_ALL_AT 3.37 3.25 3.47 3.14 2.50 2.49 2.49 2.52 2.48 2.47 2.47 2.47 2.47 2.47 2.47 2.47 2.47 2.47 2.47 2.47 # Checking swapping # possible swapping detected: D 85 D 85 # possible swapping detected: E 90 E 90 # possible swapping detected: E 97 E 97 # possible swapping detected: F 99 F 99 # possible swapping detected: E 102 E 102 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA D 85 D 85 3.009 0 0.426 0.860 4.658 55.714 48.095 LGA Q 86 Q 86 5.012 0 0.070 1.255 11.451 31.548 15.926 LGA L 87 L 87 5.804 0 0.035 1.416 10.097 30.476 18.988 LGA K 88 K 88 3.586 0 0.066 0.156 9.018 52.143 31.852 LGA K 89 K 89 1.230 0 0.025 0.804 9.898 81.548 49.683 LGA E 90 E 90 2.528 0 0.029 1.260 6.405 71.071 43.333 LGA L 91 L 91 2.789 0 0.032 1.426 9.265 60.952 36.726 LGA A 92 A 92 3.821 0 0.052 0.073 4.738 43.810 41.333 LGA D 93 D 93 3.751 0 0.297 0.334 5.360 50.119 40.179 LGA A 94 A 94 2.775 0 0.028 0.050 3.092 57.262 57.238 LGA I 95 I 95 2.531 0 0.026 0.644 4.661 57.143 53.929 LGA T 96 T 96 2.432 0 0.024 0.081 2.686 64.762 61.497 LGA E 97 E 97 2.151 0 0.084 0.488 2.307 66.786 67.460 LGA R 98 R 98 1.599 0 0.038 1.406 5.514 72.857 62.035 LGA F 99 F 99 1.742 0 0.023 1.455 6.866 72.857 52.727 LGA L 100 L 100 2.313 0 0.026 0.981 5.458 66.786 56.310 LGA E 101 E 101 1.885 0 0.052 0.356 3.872 75.119 61.376 LGA E 102 E 102 1.396 0 0.066 0.782 2.265 79.286 78.677 LGA A 103 A 103 1.305 0 0.079 0.099 1.925 79.286 79.714 LGA K 104 K 104 1.438 0 0.068 1.168 4.439 77.143 70.000 LGA S 105 S 105 1.830 0 0.171 0.222 2.761 66.905 68.889 LGA I 106 I 106 1.416 0 0.268 1.205 3.853 75.119 69.286 LGA G 107 G 107 1.166 0 0.056 0.056 1.174 85.952 85.952 LGA L 108 L 108 0.472 0 0.094 1.403 3.650 95.238 78.690 LGA D 109 D 109 0.881 0 0.043 0.200 1.401 92.857 88.274 LGA D 110 D 110 1.319 0 0.050 0.993 5.341 79.286 61.369 LGA Q 111 Q 111 1.744 0 0.052 0.943 4.393 72.857 61.481 LGA T 112 T 112 1.368 0 0.052 0.093 1.748 81.429 78.980 LGA A 113 A 113 1.383 0 0.022 0.041 1.609 81.429 79.714 LGA I 114 I 114 1.549 0 0.023 0.591 2.850 75.000 71.964 LGA E 115 E 115 1.638 0 0.039 0.682 4.136 75.000 63.016 LGA L 116 L 116 1.654 0 0.029 0.500 1.956 72.857 77.321 LGA L 117 L 117 1.874 0 0.024 1.148 4.824 72.857 62.798 LGA I 118 I 118 1.975 0 0.015 1.088 4.304 72.857 60.060 LGA K 119 K 119 2.018 0 0.029 1.042 3.557 66.786 63.492 LGA R 120 R 120 2.668 0 0.030 0.871 4.408 57.262 54.113 LGA S 121 S 121 2.587 0 0.026 0.043 3.069 57.262 59.762 LGA R 122 R 122 2.688 0 0.184 1.157 7.705 53.810 40.693 LGA N 123 N 123 4.565 0 0.233 1.116 8.118 24.167 30.952 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 39 156 156 100.00 313 313 100.00 39 SUMMARY(RMSD_GDC): 2.472 2.444 3.481 66.810 58.561 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 39 39 4.0 36 2.16 72.436 78.719 1.594 LGA_LOCAL RMSD: 2.159 Number of atoms: 36 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.519 Number of assigned atoms: 39 Std_ASGN_ATOMS RMSD: 2.472 Standard rmsd on all 39 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.502826 * X + 0.514497 * Y + 0.694592 * Z + -48.502171 Y_new = -0.635536 * X + -0.324608 * Y + 0.700517 * Z + 53.947132 Z_new = 0.585884 * X + -0.793677 * Y + 0.163760 * Z + 11.307686 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.901453 -0.625971 -1.367321 [DEG: -51.6495 -35.8655 -78.3417 ] ZXZ: 2.360441 1.406296 2.505693 [DEG: 135.2433 80.5748 143.5656 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0586TS314_1-D2 REMARK 2: T0586-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0586TS314_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 39 39 4.0 36 2.16 78.719 2.47 REMARK ---------------------------------------------------------- MOLECULE T0586TS314_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0586 REMARK MODEL 1 REMARK PARENT 3ic7:A ATOM 668 N ASP 85 4.904 19.667 16.471 1.00 0.50 N ATOM 669 CA ASP 85 4.256 18.493 16.994 1.00 0.50 C ATOM 670 CB ASP 85 3.670 18.713 18.396 1.00 0.50 C ATOM 671 CG ASP 85 3.270 17.361 18.976 1.00 0.50 C ATOM 672 OD1 ASP 85 3.569 16.323 18.328 1.00 0.50 O ATOM 673 OD2 ASP 85 2.660 17.348 20.078 1.00 0.50 O ATOM 674 C ASP 85 3.126 18.121 16.094 1.00 0.50 C ATOM 675 O ASP 85 1.999 17.885 16.535 1.00 0.50 O ATOM 676 N GLN 86 3.427 18.035 14.792 1.00 0.50 N ATOM 677 CA GLN 86 2.468 17.618 13.824 1.00 0.50 C ATOM 678 CB GLN 86 3.046 17.631 12.401 1.00 0.50 C ATOM 679 CG GLN 86 2.068 17.185 11.317 1.00 0.50 C ATOM 680 CD GLN 86 2.879 17.013 10.044 1.00 0.50 C ATOM 681 OE1 GLN 86 3.771 16.171 9.976 1.00 0.50 O ATOM 682 NE2 GLN 86 2.569 17.839 9.009 1.00 0.50 N ATOM 683 C GLN 86 2.195 16.194 14.161 1.00 0.50 C ATOM 684 O GLN 86 1.095 15.688 13.969 1.00 0.50 O ATOM 685 N LEU 87 3.230 15.524 14.699 1.00 0.50 N ATOM 686 CA LEU 87 3.196 14.126 14.984 1.00 0.50 C ATOM 687 CB LEU 87 4.508 13.619 15.600 1.00 0.50 C ATOM 688 CG LEU 87 5.734 13.859 14.696 1.00 0.50 C ATOM 689 CD1 LEU 87 7.016 13.320 15.347 1.00 0.50 C ATOM 690 CD2 LEU 87 5.498 13.317 13.278 1.00 0.50 C ATOM 691 C LEU 87 2.099 13.817 15.949 1.00 0.50 C ATOM 692 O LEU 87 1.404 12.817 15.788 1.00 0.50 O ATOM 693 N LYS 88 1.904 14.654 16.982 1.00 0.50 N ATOM 694 CA LYS 88 0.906 14.319 17.956 1.00 0.50 C ATOM 695 CB LYS 88 0.790 15.379 19.068 1.00 0.50 C ATOM 696 CG LYS 88 -0.090 14.958 20.248 1.00 0.50 C ATOM 697 CD LYS 88 0.047 15.881 21.464 1.00 0.50 C ATOM 698 CE LYS 88 -0.749 15.430 22.690 1.00 0.50 C ATOM 699 NZ LYS 88 -0.450 16.315 23.838 1.00 0.50 N ATOM 700 C LYS 88 -0.434 14.253 17.291 1.00 0.50 C ATOM 701 O LYS 88 -1.151 13.259 17.399 1.00 0.50 O ATOM 702 N LYS 89 -0.779 15.320 16.552 1.00 0.50 N ATOM 703 CA LYS 89 -2.067 15.460 15.936 1.00 0.50 C ATOM 704 CB LYS 89 -2.215 16.819 15.230 1.00 0.50 C ATOM 705 CG LYS 89 -3.574 17.016 14.555 1.00 0.50 C ATOM 706 CD LYS 89 -3.806 18.432 14.022 1.00 0.50 C ATOM 707 CE LYS 89 -3.111 18.697 12.686 1.00 0.50 C ATOM 708 NZ LYS 89 -3.433 20.061 12.211 1.00 0.50 N ATOM 709 C LYS 89 -2.299 14.419 14.891 1.00 0.50 C ATOM 710 O LYS 89 -3.358 13.795 14.852 1.00 0.50 O ATOM 711 N GLU 90 -1.298 14.202 14.024 1.00 0.50 N ATOM 712 CA GLU 90 -1.441 13.337 12.888 1.00 0.50 C ATOM 713 CB GLU 90 -0.210 13.350 11.969 1.00 0.50 C ATOM 714 CG GLU 90 -0.333 12.391 10.782 1.00 0.50 C ATOM 715 CD GLU 90 -1.463 12.873 9.885 1.00 0.50 C ATOM 716 OE1 GLU 90 -2.087 13.912 10.230 1.00 0.50 O ATOM 717 OE2 GLU 90 -1.724 12.206 8.848 1.00 0.50 O ATOM 718 C GLU 90 -1.668 11.918 13.289 1.00 0.50 C ATOM 719 O GLU 90 -2.477 11.226 12.676 1.00 0.50 O ATOM 720 N LEU 91 -0.967 11.447 14.330 1.00 0.50 N ATOM 721 CA LEU 91 -1.041 10.067 14.708 1.00 0.50 C ATOM 722 CB LEU 91 -0.103 9.763 15.889 1.00 0.50 C ATOM 723 CG LEU 91 -0.095 8.296 16.347 1.00 0.50 C ATOM 724 CD1 LEU 91 0.441 7.366 15.247 1.00 0.50 C ATOM 725 CD2 LEU 91 0.665 8.141 17.672 1.00 0.50 C ATOM 726 C LEU 91 -2.450 9.747 15.112 1.00 0.50 C ATOM 727 O LEU 91 -2.990 8.699 14.765 1.00 0.50 O ATOM 728 N ALA 92 -3.086 10.684 15.835 1.00 0.50 N ATOM 729 CA ALA 92 -4.397 10.514 16.393 1.00 0.50 C ATOM 730 CB ALA 92 -4.838 11.717 17.245 1.00 0.50 C ATOM 731 C ALA 92 -5.435 10.317 15.331 1.00 0.50 C ATOM 732 O ALA 92 -6.388 9.568 15.538 1.00 0.50 O ATOM 733 N ASP 93 -5.300 11.001 14.182 1.00 0.50 N ATOM 734 CA ASP 93 -6.317 10.963 13.169 1.00 0.50 C ATOM 735 CB ASP 93 -6.248 12.166 12.212 1.00 0.50 C ATOM 736 CG ASP 93 -6.653 13.404 13.004 1.00 0.50 C ATOM 737 OD1 ASP 93 -6.869 13.270 14.237 1.00 0.50 O ATOM 738 OD2 ASP 93 -6.758 14.500 12.391 1.00 0.50 O ATOM 739 C ASP 93 -6.221 9.718 12.340 1.00 0.50 C ATOM 740 O ASP 93 -6.718 8.665 12.734 1.00 0.50 O ATOM 741 N ALA 94 -5.624 9.841 11.136 1.00 0.50 N ATOM 742 CA ALA 94 -5.522 8.796 10.150 1.00 0.50 C ATOM 743 CB ALA 94 -4.968 9.295 8.806 1.00 0.50 C ATOM 744 C ALA 94 -4.669 7.633 10.572 1.00 0.50 C ATOM 745 O ALA 94 -5.006 6.495 10.259 1.00 0.50 O ATOM 746 N ILE 95 -3.535 7.864 11.263 1.00 0.50 N ATOM 747 CA ILE 95 -2.626 6.785 11.567 1.00 0.50 C ATOM 748 CB ILE 95 -1.305 7.231 12.129 1.00 0.50 C ATOM 749 CG2 ILE 95 -0.600 5.987 12.695 1.00 0.50 C ATOM 750 CG1 ILE 95 -0.476 7.948 11.045 1.00 0.50 C ATOM 751 CD1 ILE 95 -1.087 9.261 10.560 1.00 0.50 C ATOM 752 C ILE 95 -3.192 5.746 12.495 1.00 0.50 C ATOM 753 O ILE 95 -2.996 4.558 12.253 1.00 0.50 O ATOM 754 N THR 96 -3.885 6.140 13.582 1.00 0.50 N ATOM 755 CA THR 96 -4.378 5.208 14.567 1.00 0.50 C ATOM 756 CB THR 96 -4.934 5.885 15.786 1.00 0.50 C ATOM 757 OG1 THR 96 -5.980 6.771 15.423 1.00 0.50 O ATOM 758 CG2 THR 96 -3.798 6.654 16.477 1.00 0.50 C ATOM 759 C THR 96 -5.440 4.290 14.025 1.00 0.50 C ATOM 760 O THR 96 -5.451 3.097 14.332 1.00 0.50 O ATOM 761 N GLU 97 -6.345 4.816 13.184 1.00 0.50 N ATOM 762 CA GLU 97 -7.473 4.080 12.678 1.00 0.50 C ATOM 763 CB GLU 97 -8.347 4.917 11.723 1.00 0.50 C ATOM 764 CG GLU 97 -9.560 4.169 11.158 1.00 0.50 C ATOM 765 CD GLU 97 -10.551 3.938 12.292 1.00 0.50 C ATOM 766 OE1 GLU 97 -10.271 3.063 13.152 1.00 0.50 O ATOM 767 OE2 GLU 97 -11.602 4.634 12.311 1.00 0.50 O ATOM 768 C GLU 97 -6.981 2.890 11.921 1.00 0.50 C ATOM 769 O GLU 97 -7.631 1.847 11.894 1.00 0.50 O ATOM 770 N ARG 98 -5.795 3.008 11.305 1.00 0.50 N ATOM 771 CA ARG 98 -5.254 1.968 10.481 1.00 0.50 C ATOM 772 CB ARG 98 -3.835 2.285 9.983 1.00 0.50 C ATOM 773 CG ARG 98 -3.235 1.165 9.135 1.00 0.50 C ATOM 774 CD ARG 98 -1.761 1.388 8.787 1.00 0.50 C ATOM 775 NE ARG 98 -1.669 2.690 8.072 1.00 0.50 N ATOM 776 CZ ARG 98 -1.968 2.759 6.743 1.00 0.50 C ATOM 777 NH1 ARG 98 -2.350 1.634 6.069 1.00 0.50 H ATOM 778 NH2 ARG 98 -1.901 3.956 6.092 1.00 0.50 H ATOM 779 C ARG 98 -5.139 0.709 11.280 1.00 0.50 C ATOM 780 O ARG 98 -5.345 -0.376 10.743 1.00 0.50 O ATOM 781 N PHE 99 -4.772 0.832 12.569 1.00 0.50 N ATOM 782 CA PHE 99 -4.526 -0.248 13.483 1.00 0.50 C ATOM 783 CB PHE 99 -4.103 0.260 14.870 1.00 0.50 C ATOM 784 CG PHE 99 -2.770 0.913 14.792 1.00 0.50 C ATOM 785 CD1 PHE 99 -2.633 2.165 14.237 1.00 0.50 C ATOM 786 CD2 PHE 99 -1.665 0.283 15.314 1.00 0.50 C ATOM 787 CE1 PHE 99 -1.401 2.772 14.171 1.00 0.50 C ATOM 788 CE2 PHE 99 -0.431 0.886 15.251 1.00 0.50 C ATOM 789 CZ PHE 99 -0.297 2.128 14.677 1.00 0.50 C ATOM 790 C PHE 99 -5.749 -1.060 13.780 1.00 0.50 C ATOM 791 O PHE 99 -5.729 -2.286 13.679 1.00 0.50 O ATOM 792 N LEU 100 -6.857 -0.381 14.124 1.00 0.50 N ATOM 793 CA LEU 100 -8.025 -1.043 14.631 1.00 0.50 C ATOM 794 CB LEU 100 -9.169 -0.086 15.009 1.00 0.50 C ATOM 795 CG LEU 100 -8.884 0.726 16.284 1.00 0.50 C ATOM 796 CD1 LEU 100 -7.680 1.664 16.104 1.00 0.50 C ATOM 797 CD2 LEU 100 -10.147 1.452 16.772 1.00 0.50 C ATOM 798 C LEU 100 -8.561 -2.026 13.647 1.00 0.50 C ATOM 799 O LEU 100 -9.077 -3.070 14.037 1.00 0.50 O ATOM 800 N GLU 101 -8.463 -1.728 12.344 1.00 0.50 N ATOM 801 CA GLU 101 -9.024 -2.624 11.377 1.00 0.50 C ATOM 802 CB GLU 101 -8.701 -2.199 9.934 1.00 0.50 C ATOM 803 CG GLU 101 -9.483 -0.987 9.431 1.00 0.50 C ATOM 804 CD GLU 101 -10.845 -1.485 8.973 1.00 0.50 C ATOM 805 OE1 GLU 101 -11.648 -1.892 9.854 1.00 0.50 O ATOM 806 OE2 GLU 101 -11.100 -1.473 7.738 1.00 0.50 O ATOM 807 C GLU 101 -8.418 -3.987 11.536 1.00 0.50 C ATOM 808 O GLU 101 -9.135 -4.982 11.605 1.00 0.50 O ATOM 809 N GLU 102 -7.077 -4.067 11.609 1.00 0.50 N ATOM 810 CA GLU 102 -6.424 -5.347 11.645 1.00 0.50 C ATOM 811 CB GLU 102 -4.896 -5.230 11.514 1.00 0.50 C ATOM 812 CG GLU 102 -4.460 -4.635 10.172 1.00 0.50 C ATOM 813 CD GLU 102 -2.938 -4.583 10.127 1.00 0.50 C ATOM 814 OE1 GLU 102 -2.292 -5.238 10.986 1.00 0.50 O ATOM 815 OE2 GLU 102 -2.402 -3.884 9.226 1.00 0.50 O ATOM 816 C GLU 102 -6.712 -6.075 12.917 1.00 0.50 C ATOM 817 O GLU 102 -7.103 -7.240 12.901 1.00 0.50 O ATOM 818 N ALA 103 -6.567 -5.384 14.060 1.00 0.50 N ATOM 819 CA ALA 103 -6.724 -6.016 15.335 1.00 0.50 C ATOM 820 CB ALA 103 -6.493 -5.060 16.516 1.00 0.50 C ATOM 821 C ALA 103 -8.120 -6.519 15.426 1.00 0.50 C ATOM 822 O ALA 103 -8.369 -7.551 16.048 1.00 0.50 O ATOM 823 N LYS 104 -9.071 -5.754 14.862 1.00 0.50 N ATOM 824 CA LYS 104 -10.451 -6.125 14.873 1.00 0.50 C ATOM 825 CB LYS 104 -11.346 -4.970 14.384 1.00 0.50 C ATOM 826 CG LYS 104 -12.818 -5.114 14.768 1.00 0.50 C ATOM 827 CD LYS 104 -13.532 -6.293 14.106 1.00 0.50 C ATOM 828 CE LYS 104 -14.279 -5.893 12.834 1.00 0.50 C ATOM 829 NZ LYS 104 -15.044 -7.047 12.314 1.00 0.50 N ATOM 830 C LYS 104 -10.684 -7.328 14.001 1.00 0.50 C ATOM 831 O LYS 104 -11.307 -8.297 14.431 1.00 0.50 O ATOM 832 N SER 105 -10.162 -7.310 12.755 1.00 0.50 N ATOM 833 CA SER 105 -10.416 -8.363 11.805 1.00 0.50 C ATOM 834 CB SER 105 -9.869 -8.045 10.401 1.00 0.50 C ATOM 835 OG SER 105 -8.454 -7.929 10.431 1.00 0.50 O ATOM 836 C SER 105 -9.804 -9.659 12.240 1.00 0.50 C ATOM 837 O SER 105 -10.479 -10.686 12.303 1.00 0.50 O ATOM 838 N ILE 106 -8.506 -9.633 12.584 1.00 0.50 N ATOM 839 CA ILE 106 -7.770 -10.809 12.939 1.00 0.50 C ATOM 840 CB ILE 106 -6.336 -10.510 13.268 1.00 0.50 C ATOM 841 CG2 ILE 106 -6.310 -9.582 14.492 1.00 0.50 C ATOM 842 CG1 ILE 106 -5.530 -11.808 13.432 1.00 0.50 C ATOM 843 CD1 ILE 106 -4.020 -11.580 13.508 1.00 0.50 C ATOM 844 C ILE 106 -8.401 -11.426 14.145 1.00 0.50 C ATOM 845 O ILE 106 -8.502 -12.649 14.238 1.00 0.50 O ATOM 846 N GLY 107 -8.879 -10.598 15.091 1.00 0.50 N ATOM 847 CA GLY 107 -9.430 -11.142 16.297 1.00 0.50 C ATOM 848 C GLY 107 -8.418 -10.992 17.390 1.00 0.50 C ATOM 849 O GLY 107 -8.495 -11.685 18.404 1.00 0.50 O ATOM 850 N LEU 108 -7.435 -10.086 17.200 1.00 0.50 N ATOM 851 CA LEU 108 -6.426 -9.857 18.202 1.00 0.50 C ATOM 852 CB LEU 108 -5.150 -9.165 17.672 1.00 0.50 C ATOM 853 CG LEU 108 -4.328 -10.005 16.680 1.00 0.50 C ATOM 854 CD1 LEU 108 -3.076 -9.248 16.214 1.00 0.50 C ATOM 855 CD2 LEU 108 -4.012 -11.392 17.258 1.00 0.50 C ATOM 856 C LEU 108 -6.974 -8.940 19.247 1.00 0.50 C ATOM 857 O LEU 108 -7.561 -7.903 18.944 1.00 0.50 O ATOM 858 N ASP 109 -6.801 -9.308 20.529 1.00 0.50 N ATOM 859 CA ASP 109 -7.251 -8.436 21.566 1.00 0.50 C ATOM 860 CB ASP 109 -7.608 -9.133 22.890 1.00 0.50 C ATOM 861 CG ASP 109 -6.457 -10.031 23.292 1.00 0.50 C ATOM 862 OD1 ASP 109 -6.290 -11.069 22.599 1.00 0.50 O ATOM 863 OD2 ASP 109 -5.739 -9.706 24.274 1.00 0.50 O ATOM 864 C ASP 109 -6.227 -7.382 21.796 1.00 0.50 C ATOM 865 O ASP 109 -5.079 -7.501 21.368 1.00 0.50 O ATOM 866 N ASP 110 -6.655 -6.295 22.462 1.00 0.50 N ATOM 867 CA ASP 110 -5.786 -5.194 22.739 1.00 0.50 C ATOM 868 CB ASP 110 -6.493 -4.024 23.448 1.00 0.50 C ATOM 869 CG ASP 110 -7.067 -4.528 24.767 1.00 0.50 C ATOM 870 OD1 ASP 110 -7.898 -5.473 24.720 1.00 0.50 O ATOM 871 OD2 ASP 110 -6.684 -3.980 25.835 1.00 0.50 O ATOM 872 C ASP 110 -4.692 -5.667 23.629 1.00 0.50 C ATOM 873 O ASP 110 -3.525 -5.358 23.408 1.00 0.50 O ATOM 874 N GLN 111 -5.039 -6.496 24.629 1.00 0.50 N ATOM 875 CA GLN 111 -4.084 -6.947 25.595 1.00 0.50 C ATOM 876 CB GLN 111 -4.676 -7.992 26.564 1.00 0.50 C ATOM 877 CG GLN 111 -5.773 -7.446 27.485 1.00 0.50 C ATOM 878 CD GLN 111 -5.108 -6.771 28.676 1.00 0.50 C ATOM 879 OE1 GLN 111 -4.308 -5.847 28.524 1.00 0.50 O ATOM 880 NE2 GLN 111 -5.443 -7.252 29.904 1.00 0.50 N ATOM 881 C GLN 111 -2.987 -7.624 24.851 1.00 0.50 C ATOM 882 O GLN 111 -1.822 -7.490 25.216 1.00 0.50 O ATOM 883 N THR 112 -3.333 -8.375 23.790 1.00 0.50 N ATOM 884 CA THR 112 -2.333 -9.107 23.074 1.00 0.50 C ATOM 885 CB THR 112 -2.890 -9.987 22.000 1.00 0.50 C ATOM 886 OG1 THR 112 -3.725 -10.980 22.574 1.00 0.50 O ATOM 887 CG2 THR 112 -1.719 -10.653 21.254 1.00 0.50 C ATOM 888 C THR 112 -1.315 -8.212 22.432 1.00 0.50 C ATOM 889 O THR 112 -0.117 -8.400 22.630 1.00 0.50 O ATOM 890 N ALA 113 -1.746 -7.205 21.652 1.00 0.50 N ATOM 891 CA ALA 113 -0.791 -6.388 20.952 1.00 0.50 C ATOM 892 CB ALA 113 -1.458 -5.371 20.009 1.00 0.50 C ATOM 893 C ALA 113 0.043 -5.621 21.921 1.00 0.50 C ATOM 894 O ALA 113 1.257 -5.506 21.760 1.00 0.50 O ATOM 895 N ILE 114 -0.603 -5.086 22.969 1.00 0.50 N ATOM 896 CA ILE 114 0.069 -4.257 23.924 1.00 0.50 C ATOM 897 CB ILE 114 -0.857 -3.607 24.905 1.00 0.50 C ATOM 898 CG2 ILE 114 -0.017 -3.146 26.106 1.00 0.50 C ATOM 899 CG1 ILE 114 -1.616 -2.454 24.225 1.00 0.50 C ATOM 900 CD1 ILE 114 -2.489 -2.856 23.040 1.00 0.50 C ATOM 901 C ILE 114 1.128 -5.013 24.656 1.00 0.50 C ATOM 902 O ILE 114 2.206 -4.478 24.900 1.00 0.50 O ATOM 903 N GLU 115 0.880 -6.288 25.007 1.00 0.50 N ATOM 904 CA GLU 115 1.845 -6.998 25.804 1.00 0.50 C ATOM 905 CB GLU 115 1.424 -8.435 26.142 1.00 0.50 C ATOM 906 CG GLU 115 1.247 -9.349 24.933 1.00 0.50 C ATOM 907 CD GLU 115 0.849 -10.714 25.472 1.00 0.50 C ATOM 908 OE1 GLU 115 0.786 -10.853 26.723 1.00 0.50 O ATOM 909 OE2 GLU 115 0.607 -11.634 24.645 1.00 0.50 O ATOM 910 C GLU 115 3.156 -7.051 25.081 1.00 0.50 C ATOM 911 O GLU 115 4.218 -6.971 25.695 1.00 0.50 O ATOM 912 N LEU 116 3.116 -7.183 23.750 1.00 0.50 N ATOM 913 CA LEU 116 4.313 -7.268 22.966 1.00 0.50 C ATOM 914 CB LEU 116 4.007 -7.459 21.470 1.00 0.50 C ATOM 915 CG LEU 116 3.129 -8.691 21.188 1.00 0.50 C ATOM 916 CD1 LEU 116 2.965 -8.938 19.678 1.00 0.50 C ATOM 917 CD2 LEU 116 3.635 -9.923 21.951 1.00 0.50 C ATOM 918 C LEU 116 5.068 -5.983 23.100 1.00 0.50 C ATOM 919 O LEU 116 6.295 -5.978 23.132 1.00 0.50 O ATOM 920 N LEU 117 4.343 -4.852 23.149 1.00 0.50 N ATOM 921 CA LEU 117 4.930 -3.540 23.207 1.00 0.50 C ATOM 922 CB LEU 117 3.846 -2.439 23.172 1.00 0.50 C ATOM 923 CG LEU 117 4.299 -0.975 22.945 1.00 0.50 C ATOM 924 CD1 LEU 117 3.085 -0.031 22.992 1.00 0.50 C ATOM 925 CD2 LEU 117 5.407 -0.516 23.905 1.00 0.50 C ATOM 926 C LEU 117 5.681 -3.374 24.493 1.00 0.50 C ATOM 927 O LEU 117 6.779 -2.823 24.497 1.00 0.50 O ATOM 928 N ILE 118 5.102 -3.835 25.618 1.00 0.50 N ATOM 929 CA ILE 118 5.667 -3.600 26.916 1.00 0.50 C ATOM 930 CB ILE 118 4.790 -4.073 28.044 1.00 0.50 C ATOM 931 CG2 ILE 118 4.705 -5.604 28.019 1.00 0.50 C ATOM 932 CG1 ILE 118 5.310 -3.531 29.383 1.00 0.50 C ATOM 933 CD1 ILE 118 4.362 -3.791 30.556 1.00 0.50 C ATOM 934 C ILE 118 6.996 -4.261 27.063 1.00 0.50 C ATOM 935 O ILE 118 7.925 -3.670 27.612 1.00 0.50 O ATOM 936 N LYS 119 7.136 -5.510 26.588 1.00 0.50 N ATOM 937 CA LYS 119 8.384 -6.180 26.766 1.00 0.50 C ATOM 938 CB LYS 119 8.374 -7.627 26.238 1.00 0.50 C ATOM 939 CG LYS 119 8.080 -7.745 24.743 1.00 0.50 C ATOM 940 CD LYS 119 8.337 -9.148 24.190 1.00 0.50 C ATOM 941 CE LYS 119 8.008 -9.303 22.705 1.00 0.50 C ATOM 942 NZ LYS 119 6.560 -9.115 22.481 1.00 0.50 N ATOM 943 C LYS 119 9.454 -5.420 26.052 1.00 0.50 C ATOM 944 O LYS 119 10.528 -5.190 26.605 1.00 0.50 O ATOM 945 N ARG 120 9.185 -4.979 24.810 1.00 0.50 N ATOM 946 CA ARG 120 10.208 -4.301 24.072 1.00 0.50 C ATOM 947 CB ARG 120 9.817 -4.006 22.611 1.00 0.50 C ATOM 948 CG ARG 120 8.573 -3.132 22.441 1.00 0.50 C ATOM 949 CD ARG 120 8.182 -2.917 20.974 1.00 0.50 C ATOM 950 NE ARG 120 7.892 -4.260 20.395 1.00 0.50 N ATOM 951 CZ ARG 120 7.824 -4.417 19.040 1.00 0.50 C ATOM 952 NH1 ARG 120 7.985 -3.340 18.220 1.00 0.50 H ATOM 953 NH2 ARG 120 7.599 -5.654 18.507 1.00 0.50 H ATOM 954 C ARG 120 10.581 -3.010 24.740 1.00 0.50 C ATOM 955 O ARG 120 11.759 -2.692 24.891 1.00 0.50 O ATOM 956 N SER 121 9.577 -2.241 25.190 1.00 0.50 N ATOM 957 CA SER 121 9.817 -0.956 25.781 1.00 0.50 C ATOM 958 CB SER 121 8.512 -0.216 26.119 1.00 0.50 C ATOM 959 OG SER 121 8.806 1.048 26.695 1.00 0.50 O ATOM 960 C SER 121 10.579 -1.106 27.064 1.00 0.50 C ATOM 961 O SER 121 11.394 -0.249 27.404 1.00 0.50 O ATOM 962 N ARG 122 10.355 -2.208 27.800 1.00 0.50 N ATOM 963 CA ARG 122 10.942 -2.357 29.100 1.00 0.50 C ATOM 964 CB ARG 122 10.535 -3.660 29.802 1.00 0.50 C ATOM 965 CG ARG 122 11.019 -3.706 31.252 1.00 0.50 C ATOM 966 CD ARG 122 10.635 -4.980 32.000 1.00 0.50 C ATOM 967 NE ARG 122 11.137 -4.839 33.392 1.00 0.50 N ATOM 968 CZ ARG 122 10.366 -5.277 34.427 1.00 0.50 C ATOM 969 NH1 ARG 122 9.151 -5.846 34.172 1.00 0.50 H ATOM 970 NH2 ARG 122 10.803 -5.143 35.712 1.00 0.50 H ATOM 971 C ARG 122 12.428 -2.354 28.989 1.00 0.50 C ATOM 972 O ARG 122 13.115 -1.801 29.847 1.00 0.50 O ATOM 973 N ASN 123 12.964 -2.971 27.923 1.00 0.50 N ATOM 974 CA ASN 123 14.385 -3.076 27.812 1.00 0.50 C ATOM 975 CB ASN 123 14.820 -3.739 26.495 1.00 0.50 C ATOM 976 CG ASN 123 16.287 -4.114 26.620 1.00 0.50 C ATOM 977 OD1 ASN 123 16.706 -4.683 27.626 1.00 0.50 O ATOM 978 ND2 ASN 123 17.093 -3.790 25.575 1.00 0.50 N ATOM 979 C ASN 123 14.968 -1.701 27.833 1.00 0.50 C ATOM 980 O ASN 123 15.877 -1.416 28.612 1.00 0.50 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 313 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 22.56 89.5 76 100.0 76 ARMSMC SECONDARY STRUCTURE . . 10.41 96.9 64 100.0 64 ARMSMC SURFACE . . . . . . . . 23.13 88.9 72 100.0 72 ARMSMC BURIED . . . . . . . . 6.62 100.0 4 100.0 4 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 79.03 50.0 34 100.0 34 ARMSSC1 RELIABLE SIDE CHAINS . 79.03 50.0 34 100.0 34 ARMSSC1 SECONDARY STRUCTURE . . 73.06 57.1 28 100.0 28 ARMSSC1 SURFACE . . . . . . . . 79.03 50.0 34 100.0 34 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 75.40 53.3 30 100.0 30 ARMSSC2 RELIABLE SIDE CHAINS . 62.15 65.2 23 100.0 23 ARMSSC2 SECONDARY STRUCTURE . . 77.53 50.0 24 100.0 24 ARMSSC2 SURFACE . . . . . . . . 75.40 53.3 30 100.0 30 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 65.54 57.1 14 100.0 14 ARMSSC3 RELIABLE SIDE CHAINS . 66.58 66.7 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 68.01 53.8 13 100.0 13 ARMSSC3 SURFACE . . . . . . . . 65.54 57.1 14 100.0 14 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 42.72 71.4 7 100.0 7 ARMSSC4 RELIABLE SIDE CHAINS . 42.72 71.4 7 100.0 7 ARMSSC4 SECONDARY STRUCTURE . . 43.28 83.3 6 100.0 6 ARMSSC4 SURFACE . . . . . . . . 42.72 71.4 7 100.0 7 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 2.47 (Number of atoms: 39) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 2.47 39 100.0 39 CRMSCA CRN = ALL/NP . . . . . 0.0634 CRMSCA SECONDARY STRUCTURE . . 2.53 32 100.0 32 CRMSCA SURFACE . . . . . . . . 2.51 37 100.0 37 CRMSCA BURIED . . . . . . . . 1.46 2 100.0 2 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 2.55 194 100.0 194 CRMSMC SECONDARY STRUCTURE . . 2.55 160 100.0 160 CRMSMC SURFACE . . . . . . . . 2.59 184 100.0 184 CRMSMC BURIED . . . . . . . . 1.54 10 100.0 10 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 4.29 157 100.0 157 CRMSSC RELIABLE SIDE CHAINS . 3.99 139 100.0 139 CRMSSC SECONDARY STRUCTURE . . 4.41 130 100.0 130 CRMSSC SURFACE . . . . . . . . 4.32 155 100.0 155 CRMSSC BURIED . . . . . . . . 1.52 2 100.0 2 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 3.50 313 100.0 313 CRMSALL SECONDARY STRUCTURE . . 3.56 258 100.0 258 CRMSALL SURFACE . . . . . . . . 3.54 303 100.0 303 CRMSALL BURIED . . . . . . . . 1.54 10 100.0 10 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.749 0.588 0.294 39 100.0 39 ERRCA SECONDARY STRUCTURE . . 1.840 0.615 0.308 32 100.0 32 ERRCA SURFACE . . . . . . . . 1.791 0.594 0.297 37 100.0 37 ERRCA BURIED . . . . . . . . 0.955 0.488 0.244 2 100.0 2 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.776 0.587 0.294 194 100.0 194 ERRMC SECONDARY STRUCTURE . . 1.839 0.611 0.305 160 100.0 160 ERRMC SURFACE . . . . . . . . 1.817 0.591 0.296 184 100.0 184 ERRMC BURIED . . . . . . . . 1.028 0.504 0.252 10 100.0 10 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.237 0.706 0.353 157 100.0 157 ERRSC RELIABLE SIDE CHAINS . 3.014 0.697 0.348 139 100.0 139 ERRSC SECONDARY STRUCTURE . . 3.337 0.714 0.357 130 100.0 130 ERRSC SURFACE . . . . . . . . 3.265 0.708 0.354 155 100.0 155 ERRSC BURIED . . . . . . . . 1.020 0.504 0.252 2 100.0 2 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.471 0.642 0.321 313 100.0 313 ERRALL SECONDARY STRUCTURE . . 2.541 0.658 0.329 258 100.0 258 ERRALL SURFACE . . . . . . . . 2.518 0.647 0.324 303 100.0 303 ERRALL BURIED . . . . . . . . 1.028 0.504 0.252 10 100.0 10 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 2 20 32 38 39 39 39 DISTCA CA (P) 5.13 51.28 82.05 97.44 100.00 39 DISTCA CA (RMS) 0.69 1.56 1.91 2.36 2.47 DISTCA ALL (N) 14 114 204 272 312 313 313 DISTALL ALL (P) 4.47 36.42 65.18 86.90 99.68 313 DISTALL ALL (RMS) 0.71 1.54 2.00 2.59 3.45 DISTALL END of the results output