####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 39 ( 313), selected 39 , name T0586TS291_1-D2 # Molecule2: number of CA atoms 39 ( 313), selected 39 , name T0586-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0586TS291_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 39 85 - 123 2.30 2.30 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 38 85 - 122 1.71 2.37 LCS_AVERAGE: 96.45 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 85 - 107 0.79 7.42 LCS_AVERAGE: 55.69 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 39 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT D 85 D 85 23 38 39 12 20 22 31 36 37 38 38 38 38 38 38 38 38 39 39 39 39 39 39 LCS_GDT Q 86 Q 86 23 38 39 12 18 22 27 36 37 38 38 38 38 38 38 38 38 39 39 39 39 39 39 LCS_GDT L 87 L 87 23 38 39 12 19 23 27 33 37 38 38 38 38 38 38 38 38 39 39 39 39 39 39 LCS_GDT K 88 K 88 23 38 39 12 20 23 30 36 37 38 38 38 38 38 38 38 38 39 39 39 39 39 39 LCS_GDT K 89 K 89 23 38 39 12 20 22 31 36 37 38 38 38 38 38 38 38 38 39 39 39 39 39 39 LCS_GDT E 90 E 90 23 38 39 12 20 22 29 36 37 38 38 38 38 38 38 38 38 39 39 39 39 39 39 LCS_GDT L 91 L 91 23 38 39 12 20 23 30 36 37 38 38 38 38 38 38 38 38 39 39 39 39 39 39 LCS_GDT A 92 A 92 23 38 39 12 20 22 31 36 37 38 38 38 38 38 38 38 38 39 39 39 39 39 39 LCS_GDT D 93 D 93 23 38 39 12 20 22 31 36 37 38 38 38 38 38 38 38 38 39 39 39 39 39 39 LCS_GDT A 94 A 94 23 38 39 12 20 23 31 36 37 38 38 38 38 38 38 38 38 39 39 39 39 39 39 LCS_GDT I 95 I 95 23 38 39 12 20 22 31 36 37 38 38 38 38 38 38 38 38 39 39 39 39 39 39 LCS_GDT T 96 T 96 23 38 39 11 20 22 28 36 37 38 38 38 38 38 38 38 38 39 39 39 39 39 39 LCS_GDT E 97 E 97 23 38 39 12 20 22 31 36 37 38 38 38 38 38 38 38 38 39 39 39 39 39 39 LCS_GDT R 98 R 98 23 38 39 7 20 23 31 36 37 38 38 38 38 38 38 38 38 39 39 39 39 39 39 LCS_GDT F 99 F 99 23 38 39 10 20 22 31 36 37 38 38 38 38 38 38 38 38 39 39 39 39 39 39 LCS_GDT L 100 L 100 23 38 39 10 20 22 31 36 37 38 38 38 38 38 38 38 38 39 39 39 39 39 39 LCS_GDT E 101 E 101 23 38 39 12 20 23 31 36 37 38 38 38 38 38 38 38 38 39 39 39 39 39 39 LCS_GDT E 102 E 102 23 38 39 7 20 23 31 36 37 38 38 38 38 38 38 38 38 39 39 39 39 39 39 LCS_GDT A 103 A 103 23 38 39 7 20 23 31 36 37 38 38 38 38 38 38 38 38 39 39 39 39 39 39 LCS_GDT K 104 K 104 23 38 39 9 20 22 31 36 37 38 38 38 38 38 38 38 38 39 39 39 39 39 39 LCS_GDT S 105 S 105 23 38 39 10 20 22 31 36 37 38 38 38 38 38 38 38 38 39 39 39 39 39 39 LCS_GDT I 106 I 106 23 38 39 7 20 23 31 36 37 38 38 38 38 38 38 38 38 39 39 39 39 39 39 LCS_GDT G 107 G 107 23 38 39 13 20 23 31 36 37 38 38 38 38 38 38 38 38 39 39 39 39 39 39 LCS_GDT L 108 L 108 21 38 39 13 19 23 31 36 37 38 38 38 38 38 38 38 38 39 39 39 39 39 39 LCS_GDT D 109 D 109 21 38 39 13 19 23 31 36 37 38 38 38 38 38 38 38 38 39 39 39 39 39 39 LCS_GDT D 110 D 110 21 38 39 13 19 23 31 36 37 38 38 38 38 38 38 38 38 39 39 39 39 39 39 LCS_GDT Q 111 Q 111 21 38 39 13 19 23 31 36 37 38 38 38 38 38 38 38 38 39 39 39 39 39 39 LCS_GDT T 112 T 112 21 38 39 13 19 23 31 36 37 38 38 38 38 38 38 38 38 39 39 39 39 39 39 LCS_GDT A 113 A 113 21 38 39 13 19 23 31 36 37 38 38 38 38 38 38 38 38 39 39 39 39 39 39 LCS_GDT I 114 I 114 21 38 39 13 19 23 31 36 37 38 38 38 38 38 38 38 38 39 39 39 39 39 39 LCS_GDT E 115 E 115 21 38 39 13 19 23 31 36 37 38 38 38 38 38 38 38 38 39 39 39 39 39 39 LCS_GDT L 116 L 116 21 38 39 13 19 23 31 36 37 38 38 38 38 38 38 38 38 39 39 39 39 39 39 LCS_GDT L 117 L 117 21 38 39 13 19 23 31 36 37 38 38 38 38 38 38 38 38 39 39 39 39 39 39 LCS_GDT I 118 I 118 21 38 39 13 19 23 31 36 37 38 38 38 38 38 38 38 38 39 39 39 39 39 39 LCS_GDT K 119 K 119 21 38 39 13 19 23 31 36 37 38 38 38 38 38 38 38 38 39 39 39 39 39 39 LCS_GDT R 120 R 120 21 38 39 6 19 23 31 36 37 38 38 38 38 38 38 38 38 39 39 39 39 39 39 LCS_GDT S 121 S 121 21 38 39 4 14 23 31 36 37 38 38 38 38 38 38 38 38 39 39 39 39 39 39 LCS_GDT R 122 R 122 21 38 39 3 4 17 25 31 37 38 38 38 38 38 38 38 38 39 39 39 39 39 39 LCS_GDT N 123 N 123 3 23 39 0 3 3 3 3 4 5 5 9 9 15 18 36 37 39 39 39 39 39 39 LCS_AVERAGE LCS_A: 84.05 ( 55.69 96.45 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 13 20 23 31 36 37 38 38 38 38 38 38 38 38 39 39 39 39 39 39 GDT PERCENT_AT 33.33 51.28 58.97 79.49 92.31 94.87 97.44 97.44 97.44 97.44 97.44 97.44 97.44 97.44 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.34 0.60 0.87 1.38 1.57 1.63 1.71 1.71 1.71 1.71 1.71 1.71 1.71 1.71 2.30 2.30 2.30 2.30 2.30 2.30 GDT RMS_ALL_AT 3.92 7.25 2.58 2.44 2.42 2.41 2.37 2.37 2.37 2.37 2.37 2.37 2.37 2.37 2.30 2.30 2.30 2.30 2.30 2.30 # Checking swapping # possible swapping detected: D 85 D 85 # possible swapping detected: E 102 E 102 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA D 85 D 85 1.762 0 0.052 0.291 4.088 75.238 60.238 LGA Q 86 Q 86 3.014 0 0.049 1.076 5.582 59.167 46.614 LGA L 87 L 87 2.887 0 0.045 1.410 8.886 64.881 41.548 LGA K 88 K 88 1.979 0 0.020 1.132 9.841 77.143 46.825 LGA K 89 K 89 2.407 0 0.045 0.908 10.702 70.952 41.323 LGA E 90 E 90 2.181 0 0.055 1.150 8.136 72.976 47.937 LGA L 91 L 91 1.777 0 0.034 0.973 3.710 77.143 67.381 LGA A 92 A 92 2.255 0 0.034 0.048 3.080 70.952 66.762 LGA D 93 D 93 2.230 0 0.044 0.237 4.806 70.833 54.881 LGA A 94 A 94 1.221 0 0.037 0.040 1.996 85.952 83.333 LGA I 95 I 95 1.969 0 0.031 0.980 4.968 75.000 60.238 LGA T 96 T 96 2.482 0 0.045 1.079 5.008 66.786 57.211 LGA E 97 E 97 1.616 0 0.047 0.655 2.735 79.405 72.328 LGA R 98 R 98 0.427 0 0.039 1.150 5.012 95.238 71.299 LGA F 99 F 99 1.958 0 0.022 0.162 5.236 75.000 51.818 LGA L 100 L 100 2.109 0 0.052 1.439 4.868 70.833 68.036 LGA E 101 E 101 1.003 0 0.033 0.947 3.068 85.952 78.148 LGA E 102 E 102 0.770 0 0.035 1.018 5.147 92.857 66.614 LGA A 103 A 103 1.171 0 0.032 0.050 1.929 88.214 85.143 LGA K 104 K 104 1.601 0 0.043 0.711 2.749 77.143 70.317 LGA S 105 S 105 1.738 0 0.087 0.100 2.133 75.119 71.667 LGA I 106 I 106 1.026 0 0.226 0.263 2.064 79.524 82.738 LGA G 107 G 107 0.436 0 0.165 0.165 0.436 100.000 100.000 LGA L 108 L 108 0.779 0 0.114 0.990 4.248 88.214 74.345 LGA D 109 D 109 1.233 0 0.030 1.016 4.202 83.690 70.060 LGA D 110 D 110 1.330 0 0.035 0.159 1.667 81.429 80.357 LGA Q 111 Q 111 1.457 0 0.038 0.901 5.436 81.429 61.799 LGA T 112 T 112 0.532 0 0.031 1.095 2.414 95.238 87.007 LGA A 113 A 113 0.767 0 0.034 0.050 1.226 85.952 86.857 LGA I 114 I 114 1.462 0 0.035 1.332 4.954 81.429 64.643 LGA E 115 E 115 0.536 0 0.041 0.326 1.634 92.857 87.566 LGA L 116 L 116 0.795 0 0.040 0.910 4.161 85.952 76.131 LGA L 117 L 117 1.497 0 0.029 0.149 2.392 81.429 75.119 LGA I 118 I 118 0.996 0 0.032 1.116 2.789 83.690 77.500 LGA K 119 K 119 1.051 0 0.026 0.655 2.781 83.690 72.646 LGA R 120 R 120 1.315 0 0.120 1.131 4.541 81.429 64.459 LGA S 121 S 121 1.526 0 0.233 0.247 2.350 75.000 71.587 LGA R 122 R 122 3.548 0 0.713 1.167 11.505 30.595 19.567 LGA N 123 N 123 10.340 0 0.416 1.536 12.074 2.500 1.250 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 39 156 156 100.00 313 313 100.00 39 SUMMARY(RMSD_GDC): 2.303 2.301 3.504 76.944 65.725 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 39 39 4.0 38 1.71 82.051 89.092 2.096 LGA_LOCAL RMSD: 1.713 Number of atoms: 38 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.367 Number of assigned atoms: 39 Std_ASGN_ATOMS RMSD: 2.303 Standard rmsd on all 39 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.272274 * X + -0.929085 * Y + 0.250335 * Z + 57.984318 Y_new = -0.093668 * X + -0.233337 * Y + -0.967874 * Z + 56.341534 Z_new = 0.957650 * X + -0.286975 * Y + -0.023494 * Z + 9.434367 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.810254 -1.278726 -1.652482 [DEG: -161.0157 -73.2656 -94.6802 ] ZXZ: 0.253098 1.594293 1.861946 [DEG: 14.5015 91.3462 106.6817 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0586TS291_1-D2 REMARK 2: T0586-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0586TS291_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 39 39 4.0 38 1.71 89.092 2.30 REMARK ---------------------------------------------------------- MOLECULE T0586TS291_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0586 REMARK MODEL 1 REMARK PARENT 3by6_A ATOM 668 N ASP 85 2.123 20.750 15.008 1.00 1.00 N ATOM 669 CA ASP 85 2.772 19.541 15.427 1.00 1.00 C ATOM 670 CB ASP 85 3.872 19.803 16.473 1.00 1.00 C ATOM 671 CG ASP 85 4.999 20.573 15.798 1.00 1.00 C ATOM 672 OD1 ASP 85 5.425 20.151 14.689 1.00 1.00 O ATOM 673 OD2 ASP 85 5.439 21.601 16.377 1.00 1.00 O ATOM 674 C ASP 85 1.761 18.641 16.074 1.00 1.00 C ATOM 675 O ASP 85 1.736 17.439 15.812 1.00 1.00 O ATOM 676 N GLN 86 0.885 19.200 16.932 1.00 1.00 N ATOM 677 CA GLN 86 -0.059 18.380 17.642 1.00 1.00 C ATOM 678 CB GLN 86 -0.950 19.142 18.643 1.00 1.00 C ATOM 679 CG GLN 86 -1.946 20.096 17.978 1.00 1.00 C ATOM 680 CD GLN 86 -2.964 20.515 19.028 1.00 1.00 C ATOM 681 OE1 GLN 86 -3.393 19.703 19.846 1.00 1.00 O ATOM 682 NE2 GLN 86 -3.369 21.813 19.004 1.00 1.00 N ATOM 683 C GLN 86 -0.996 17.749 16.663 1.00 1.00 C ATOM 684 O GLN 86 -1.351 16.580 16.794 1.00 1.00 O ATOM 685 N LEU 87 -1.423 18.514 15.644 1.00 1.00 N ATOM 686 CA LEU 87 -2.352 17.995 14.687 1.00 1.00 C ATOM 687 CB LEU 87 -2.749 19.019 13.610 1.00 1.00 C ATOM 688 CG LEU 87 -3.457 20.265 14.177 1.00 1.00 C ATOM 689 CD1 LEU 87 -3.839 21.247 13.060 1.00 1.00 C ATOM 690 CD2 LEU 87 -4.644 19.876 15.075 1.00 1.00 C ATOM 691 C LEU 87 -1.697 16.847 13.990 1.00 1.00 C ATOM 692 O LEU 87 -2.342 15.846 13.686 1.00 1.00 O ATOM 693 N LYS 88 -0.387 16.971 13.712 1.00 1.00 N ATOM 694 CA LYS 88 0.310 15.924 13.024 1.00 1.00 C ATOM 695 CB LYS 88 1.773 16.254 12.719 1.00 1.00 C ATOM 696 CG LYS 88 2.409 15.187 11.829 1.00 1.00 C ATOM 697 CD LYS 88 1.848 15.183 10.405 1.00 1.00 C ATOM 698 CE LYS 88 2.322 13.999 9.561 1.00 1.00 C ATOM 699 NZ LYS 88 1.549 12.789 9.930 1.00 1.00 N ATOM 700 C LYS 88 0.313 14.699 13.878 1.00 1.00 C ATOM 701 O LYS 88 0.156 13.584 13.383 1.00 1.00 O ATOM 702 N LYS 89 0.485 14.883 15.197 1.00 1.00 N ATOM 703 CA LYS 89 0.536 13.779 16.111 1.00 1.00 C ATOM 704 CB LYS 89 0.634 14.234 17.579 1.00 1.00 C ATOM 705 CG LYS 89 1.769 15.222 17.863 1.00 1.00 C ATOM 706 CD LYS 89 3.158 14.686 17.525 1.00 1.00 C ATOM 707 CE LYS 89 4.267 15.722 17.720 1.00 1.00 C ATOM 708 NZ LYS 89 5.572 15.140 17.338 1.00 1.00 N ATOM 709 C LYS 89 -0.767 13.058 15.997 1.00 1.00 C ATOM 710 O LYS 89 -0.818 11.830 16.010 1.00 1.00 O ATOM 711 N GLU 90 -1.857 13.834 15.860 1.00 1.00 N ATOM 712 CA GLU 90 -3.191 13.314 15.811 1.00 1.00 C ATOM 713 CB GLU 90 -4.227 14.438 15.626 1.00 1.00 C ATOM 714 CG GLU 90 -4.143 15.557 16.673 1.00 1.00 C ATOM 715 CD GLU 90 -4.737 15.085 17.992 1.00 1.00 C ATOM 716 OE1 GLU 90 -4.042 14.337 18.731 1.00 1.00 O ATOM 717 OE2 GLU 90 -5.898 15.479 18.282 1.00 1.00 O ATOM 718 C GLU 90 -3.306 12.413 14.619 1.00 1.00 C ATOM 719 O GLU 90 -3.897 11.337 14.699 1.00 1.00 O ATOM 720 N LEU 91 -2.729 12.834 13.477 1.00 1.00 N ATOM 721 CA LEU 91 -2.801 12.073 12.262 1.00 1.00 C ATOM 722 CB LEU 91 -2.164 12.827 11.071 1.00 1.00 C ATOM 723 CG LEU 91 -2.379 12.214 9.665 1.00 1.00 C ATOM 724 CD1 LEU 91 -1.711 13.084 8.588 1.00 1.00 C ATOM 725 CD2 LEU 91 -1.922 10.749 9.566 1.00 1.00 C ATOM 726 C LEU 91 -2.068 10.790 12.498 1.00 1.00 C ATOM 727 O LEU 91 -2.494 9.729 12.046 1.00 1.00 O ATOM 728 N ALA 92 -0.926 10.868 13.208 1.00 1.00 N ATOM 729 CA ALA 92 -0.119 9.717 13.500 1.00 1.00 C ATOM 730 CB ALA 92 1.169 10.072 14.266 1.00 1.00 C ATOM 731 C ALA 92 -0.904 8.780 14.359 1.00 1.00 C ATOM 732 O ALA 92 -0.854 7.566 14.184 1.00 1.00 O ATOM 733 N ASP 93 -1.659 9.324 15.326 1.00 1.00 N ATOM 734 CA ASP 93 -2.408 8.478 16.204 1.00 1.00 C ATOM 735 CB ASP 93 -3.129 9.251 17.319 1.00 1.00 C ATOM 736 CG ASP 93 -2.058 9.774 18.266 1.00 1.00 C ATOM 737 OD1 ASP 93 -0.852 9.600 17.946 1.00 1.00 O ATOM 738 OD2 ASP 93 -2.430 10.348 19.323 1.00 1.00 O ATOM 739 C ASP 93 -3.428 7.752 15.389 1.00 1.00 C ATOM 740 O ASP 93 -3.720 6.585 15.643 1.00 1.00 O ATOM 741 N ALA 94 -3.994 8.428 14.374 1.00 1.00 N ATOM 742 CA ALA 94 -5.000 7.805 13.564 1.00 1.00 C ATOM 743 CB ALA 94 -5.554 8.737 12.472 1.00 1.00 C ATOM 744 C ALA 94 -4.407 6.609 12.881 1.00 1.00 C ATOM 745 O ALA 94 -5.039 5.555 12.818 1.00 1.00 O ATOM 746 N ILE 95 -3.172 6.733 12.352 1.00 1.00 N ATOM 747 CA ILE 95 -2.578 5.622 11.660 1.00 1.00 C ATOM 748 CB ILE 95 -1.288 5.932 10.948 1.00 1.00 C ATOM 749 CG2 ILE 95 -0.165 6.100 11.981 1.00 1.00 C ATOM 750 CG1 ILE 95 -0.987 4.830 9.921 1.00 1.00 C ATOM 751 CD1 ILE 95 0.127 5.195 8.942 1.00 1.00 C ATOM 752 C ILE 95 -2.333 4.516 12.636 1.00 1.00 C ATOM 753 O ILE 95 -2.537 3.343 12.324 1.00 1.00 O ATOM 754 N THR 96 -1.889 4.862 13.859 1.00 1.00 N ATOM 755 CA THR 96 -1.607 3.865 14.849 1.00 1.00 C ATOM 756 CB THR 96 -1.154 4.446 16.156 1.00 1.00 C ATOM 757 OG1 THR 96 0.014 5.233 15.968 1.00 1.00 O ATOM 758 CG2 THR 96 -0.858 3.287 17.123 1.00 1.00 C ATOM 759 C THR 96 -2.882 3.131 15.100 1.00 1.00 C ATOM 760 O THR 96 -2.883 1.919 15.310 1.00 1.00 O ATOM 761 N GLU 97 -4.005 3.868 15.082 1.00 1.00 N ATOM 762 CA GLU 97 -5.297 3.297 15.317 1.00 1.00 C ATOM 763 CB GLU 97 -6.415 4.350 15.265 1.00 1.00 C ATOM 764 CG GLU 97 -7.800 3.780 15.569 1.00 1.00 C ATOM 765 CD GLU 97 -8.811 4.905 15.415 1.00 1.00 C ATOM 766 OE1 GLU 97 -8.392 6.092 15.448 1.00 1.00 O ATOM 767 OE2 GLU 97 -10.019 4.586 15.255 1.00 1.00 O ATOM 768 C GLU 97 -5.568 2.288 14.240 1.00 1.00 C ATOM 769 O GLU 97 -6.122 1.223 14.502 1.00 1.00 O ATOM 770 N ARG 98 -5.172 2.596 12.991 1.00 1.00 N ATOM 771 CA ARG 98 -5.420 1.707 11.892 1.00 1.00 C ATOM 772 CB ARG 98 -4.977 2.270 10.532 1.00 1.00 C ATOM 773 CG ARG 98 -5.255 1.292 9.388 1.00 1.00 C ATOM 774 CD ARG 98 -4.860 1.811 8.005 1.00 1.00 C ATOM 775 NE ARG 98 -3.394 2.065 8.019 1.00 1.00 N ATOM 776 CZ ARG 98 -2.848 2.877 7.067 1.00 1.00 C ATOM 777 NH1 ARG 98 -3.648 3.436 6.112 1.00 1.00 H ATOM 778 NH2 ARG 98 -1.509 3.143 7.077 1.00 1.00 H ATOM 779 C ARG 98 -4.691 0.416 12.093 1.00 1.00 C ATOM 780 O ARG 98 -5.219 -0.653 11.793 1.00 1.00 O ATOM 781 N PHE 99 -3.449 0.476 12.603 1.00 1.00 N ATOM 782 CA PHE 99 -2.660 -0.711 12.768 1.00 1.00 C ATOM 783 CB PHE 99 -1.284 -0.390 13.382 1.00 1.00 C ATOM 784 CG PHE 99 -0.494 -1.646 13.464 1.00 1.00 C ATOM 785 CD1 PHE 99 0.298 -2.038 12.409 1.00 1.00 C ATOM 786 CD2 PHE 99 -0.544 -2.432 14.592 1.00 1.00 C ATOM 787 CE1 PHE 99 1.033 -3.196 12.480 1.00 1.00 C ATOM 788 CE2 PHE 99 0.187 -3.591 14.668 1.00 1.00 C ATOM 789 CZ PHE 99 0.977 -3.975 13.611 1.00 1.00 C ATOM 790 C PHE 99 -3.379 -1.619 13.717 1.00 1.00 C ATOM 791 O PHE 99 -3.542 -2.812 13.463 1.00 1.00 O ATOM 792 N LEU 100 -3.852 -1.056 14.843 1.00 1.00 N ATOM 793 CA LEU 100 -4.516 -1.852 15.830 1.00 1.00 C ATOM 794 CB LEU 100 -4.937 -1.063 17.080 1.00 1.00 C ATOM 795 CG LEU 100 -5.664 -1.937 18.123 1.00 1.00 C ATOM 796 CD1 LEU 100 -4.761 -3.065 18.646 1.00 1.00 C ATOM 797 CD2 LEU 100 -6.259 -1.082 19.253 1.00 1.00 C ATOM 798 C LEU 100 -5.758 -2.421 15.234 1.00 1.00 C ATOM 799 O LEU 100 -6.099 -3.578 15.475 1.00 1.00 O ATOM 800 N GLU 101 -6.456 -1.620 14.415 1.00 1.00 N ATOM 801 CA GLU 101 -7.705 -2.029 13.848 1.00 1.00 C ATOM 802 CB GLU 101 -8.278 -0.933 12.932 1.00 1.00 C ATOM 803 CG GLU 101 -9.706 -1.176 12.448 1.00 1.00 C ATOM 804 CD GLU 101 -10.174 0.115 11.792 1.00 1.00 C ATOM 805 OE1 GLU 101 -10.057 1.185 12.450 1.00 1.00 O ATOM 806 OE2 GLU 101 -10.652 0.052 10.628 1.00 1.00 O ATOM 807 C GLU 101 -7.477 -3.265 13.037 1.00 1.00 C ATOM 808 O GLU 101 -8.268 -4.205 13.101 1.00 1.00 O ATOM 809 N GLU 102 -6.381 -3.304 12.257 1.00 1.00 N ATOM 810 CA GLU 102 -6.105 -4.450 11.440 1.00 1.00 C ATOM 811 CB GLU 102 -4.868 -4.274 10.543 1.00 1.00 C ATOM 812 CG GLU 102 -5.076 -3.269 9.411 1.00 1.00 C ATOM 813 CD GLU 102 -6.068 -3.874 8.422 1.00 1.00 C ATOM 814 OE1 GLU 102 -6.555 -5.008 8.680 1.00 1.00 O ATOM 815 OE2 GLU 102 -6.355 -3.204 7.396 1.00 1.00 O ATOM 816 C GLU 102 -5.830 -5.618 12.327 1.00 1.00 C ATOM 817 O GLU 102 -6.265 -6.736 12.059 1.00 1.00 O ATOM 818 N ALA 103 -5.080 -5.385 13.416 1.00 1.00 N ATOM 819 CA ALA 103 -4.723 -6.454 14.301 1.00 1.00 C ATOM 820 CB ALA 103 -3.787 -5.999 15.436 1.00 1.00 C ATOM 821 C ALA 103 -5.950 -7.034 14.935 1.00 1.00 C ATOM 822 O ALA 103 -6.089 -8.250 15.035 1.00 1.00 O ATOM 823 N LYS 104 -6.894 -6.195 15.390 1.00 1.00 N ATOM 824 CA LYS 104 -8.043 -6.772 16.024 1.00 1.00 C ATOM 825 CB LYS 104 -9.027 -5.740 16.605 1.00 1.00 C ATOM 826 CG LYS 104 -9.826 -4.986 15.543 1.00 1.00 C ATOM 827 CD LYS 104 -11.064 -4.287 16.109 1.00 1.00 C ATOM 828 CE LYS 104 -11.973 -3.677 15.039 1.00 1.00 C ATOM 829 NZ LYS 104 -13.230 -3.192 15.650 1.00 1.00 N ATOM 830 C LYS 104 -8.785 -7.561 14.994 1.00 1.00 C ATOM 831 O LYS 104 -9.276 -8.654 15.271 1.00 1.00 O ATOM 832 N SER 105 -8.870 -7.024 13.759 1.00 1.00 N ATOM 833 CA SER 105 -9.625 -7.669 12.725 1.00 1.00 C ATOM 834 CB SER 105 -9.738 -6.847 11.427 1.00 1.00 C ATOM 835 OG SER 105 -8.487 -6.774 10.763 1.00 1.00 O ATOM 836 C SER 105 -8.992 -8.981 12.393 1.00 1.00 C ATOM 837 O SER 105 -9.687 -9.939 12.056 1.00 1.00 O ATOM 838 N ILE 106 -7.652 -9.072 12.487 1.00 1.00 N ATOM 839 CA ILE 106 -7.032 -10.325 12.182 1.00 1.00 C ATOM 840 CB ILE 106 -5.526 -10.335 12.088 1.00 1.00 C ATOM 841 CG2 ILE 106 -5.138 -9.376 10.951 1.00 1.00 C ATOM 842 CG1 ILE 106 -4.823 -10.044 13.417 1.00 1.00 C ATOM 843 CD1 ILE 106 -3.315 -10.275 13.342 1.00 1.00 C ATOM 844 C ILE 106 -7.518 -11.309 13.195 1.00 1.00 C ATOM 845 O ILE 106 -7.623 -12.499 12.907 1.00 1.00 O ATOM 846 N GLY 107 -7.840 -10.840 14.418 1.00 1.00 N ATOM 847 CA GLY 107 -8.340 -11.757 15.400 1.00 1.00 C ATOM 848 C GLY 107 -7.597 -11.604 16.689 1.00 1.00 C ATOM 849 O GLY 107 -8.015 -12.157 17.706 1.00 1.00 O ATOM 850 N LEU 108 -6.471 -10.866 16.709 1.00 1.00 N ATOM 851 CA LEU 108 -5.820 -10.720 17.980 1.00 1.00 C ATOM 852 CB LEU 108 -4.385 -10.165 17.899 1.00 1.00 C ATOM 853 CG LEU 108 -3.391 -11.184 17.307 1.00 1.00 C ATOM 854 CD1 LEU 108 -3.202 -12.385 18.249 1.00 1.00 C ATOM 855 CD2 LEU 108 -3.805 -11.616 15.894 1.00 1.00 C ATOM 856 C LEU 108 -6.658 -9.833 18.848 1.00 1.00 C ATOM 857 O LEU 108 -7.157 -8.800 18.403 1.00 1.00 O ATOM 858 N ASP 109 -6.832 -10.232 20.128 1.00 1.00 N ATOM 859 CA ASP 109 -7.664 -9.524 21.059 1.00 1.00 C ATOM 860 CB ASP 109 -8.037 -10.344 22.313 1.00 1.00 C ATOM 861 CG ASP 109 -8.960 -11.493 21.917 1.00 1.00 C ATOM 862 OD1 ASP 109 -9.482 -11.472 20.770 1.00 1.00 O ATOM 863 OD2 ASP 109 -9.158 -12.407 22.761 1.00 1.00 O ATOM 864 C ASP 109 -6.946 -8.300 21.538 1.00 1.00 C ATOM 865 O ASP 109 -5.723 -8.198 21.459 1.00 1.00 O ATOM 866 N ASP 110 -7.725 -7.331 22.063 1.00 1.00 N ATOM 867 CA ASP 110 -7.211 -6.081 22.548 1.00 1.00 C ATOM 868 CB ASP 110 -8.306 -5.073 22.945 1.00 1.00 C ATOM 869 CG ASP 110 -8.886 -4.458 21.677 1.00 1.00 C ATOM 870 OD1 ASP 110 -8.280 -4.651 20.589 1.00 1.00 O ATOM 871 OD2 ASP 110 -9.942 -3.776 21.778 1.00 1.00 O ATOM 872 C ASP 110 -6.343 -6.287 23.750 1.00 1.00 C ATOM 873 O ASP 110 -5.333 -5.605 23.910 1.00 1.00 O ATOM 874 N GLN 111 -6.704 -7.239 24.627 1.00 1.00 N ATOM 875 CA GLN 111 -5.948 -7.415 25.834 1.00 1.00 C ATOM 876 CB GLN 111 -6.494 -8.536 26.735 1.00 1.00 C ATOM 877 CG GLN 111 -6.391 -9.932 26.116 1.00 1.00 C ATOM 878 CD GLN 111 -6.957 -10.929 27.116 1.00 1.00 C ATOM 879 OE1 GLN 111 -6.219 -11.692 27.739 1.00 1.00 O ATOM 880 NE2 GLN 111 -8.304 -10.912 27.288 1.00 1.00 N ATOM 881 C GLN 111 -4.547 -7.787 25.470 1.00 1.00 C ATOM 882 O GLN 111 -3.596 -7.319 26.092 1.00 1.00 O ATOM 883 N THR 112 -4.383 -8.664 24.462 1.00 1.00 N ATOM 884 CA THR 112 -3.072 -9.077 24.054 1.00 1.00 C ATOM 885 CB THR 112 -3.093 -10.213 23.070 1.00 1.00 C ATOM 886 OG1 THR 112 -3.760 -9.825 21.878 1.00 1.00 O ATOM 887 CG2 THR 112 -3.811 -11.407 23.720 1.00 1.00 C ATOM 888 C THR 112 -2.362 -7.922 23.423 1.00 1.00 C ATOM 889 O THR 112 -1.170 -7.721 23.642 1.00 1.00 O ATOM 890 N ALA 113 -3.093 -7.118 22.627 1.00 1.00 N ATOM 891 CA ALA 113 -2.495 -6.021 21.923 1.00 1.00 C ATOM 892 CB ALA 113 -3.500 -5.254 21.048 1.00 1.00 C ATOM 893 C ALA 113 -1.918 -5.050 22.906 1.00 1.00 C ATOM 894 O ALA 113 -0.832 -4.517 22.688 1.00 1.00 O ATOM 895 N ILE 114 -2.617 -4.790 24.026 1.00 1.00 N ATOM 896 CA ILE 114 -2.101 -3.815 24.942 1.00 1.00 C ATOM 897 CB ILE 114 -3.026 -3.518 26.088 1.00 1.00 C ATOM 898 CG2 ILE 114 -4.338 -2.971 25.495 1.00 1.00 C ATOM 899 CG1 ILE 114 -3.210 -4.755 26.979 1.00 1.00 C ATOM 900 CD1 ILE 114 -3.926 -4.454 28.291 1.00 1.00 C ATOM 901 C ILE 114 -0.798 -4.294 25.494 1.00 1.00 C ATOM 902 O ILE 114 0.171 -3.538 25.554 1.00 1.00 O ATOM 903 N GLU 115 -0.729 -5.575 25.900 1.00 1.00 N ATOM 904 CA GLU 115 0.483 -6.056 26.489 1.00 1.00 C ATOM 905 CB GLU 115 0.368 -7.494 27.026 1.00 1.00 C ATOM 906 CG GLU 115 1.660 -7.990 27.680 1.00 1.00 C ATOM 907 CD GLU 115 1.447 -9.414 28.176 1.00 1.00 C ATOM 908 OE1 GLU 115 0.288 -9.905 28.112 1.00 1.00 O ATOM 909 OE2 GLU 115 2.450 -10.035 28.619 1.00 1.00 O ATOM 910 C GLU 115 1.567 -6.030 25.457 1.00 1.00 C ATOM 911 O GLU 115 2.702 -5.643 25.738 1.00 1.00 O ATOM 912 N LEU 116 1.233 -6.428 24.216 1.00 1.00 N ATOM 913 CA LEU 116 2.198 -6.506 23.159 1.00 1.00 C ATOM 914 CB LEU 116 1.560 -7.000 21.840 1.00 1.00 C ATOM 915 CG LEU 116 2.502 -7.136 20.623 1.00 1.00 C ATOM 916 CD1 LEU 116 2.974 -5.780 20.069 1.00 1.00 C ATOM 917 CD2 LEU 116 3.662 -8.089 20.933 1.00 1.00 C ATOM 918 C LEU 116 2.748 -5.137 22.924 1.00 1.00 C ATOM 919 O LEU 116 3.956 -4.956 22.786 1.00 1.00 O ATOM 920 N LEU 117 1.867 -4.123 22.898 1.00 1.00 N ATOM 921 CA LEU 117 2.282 -2.793 22.566 1.00 1.00 C ATOM 922 CB LEU 117 1.115 -1.800 22.626 1.00 1.00 C ATOM 923 CG LEU 117 1.514 -0.354 22.273 1.00 1.00 C ATOM 924 CD1 LEU 117 1.917 -0.237 20.796 1.00 1.00 C ATOM 925 CD2 LEU 117 0.411 0.640 22.671 1.00 1.00 C ATOM 926 C LEU 117 3.287 -2.316 23.552 1.00 1.00 C ATOM 927 O LEU 117 4.340 -1.804 23.176 1.00 1.00 O ATOM 928 N ILE 118 2.996 -2.489 24.848 1.00 1.00 N ATOM 929 CA ILE 118 3.905 -1.971 25.820 1.00 1.00 C ATOM 930 CB ILE 118 3.395 -2.113 27.226 1.00 1.00 C ATOM 931 CG2 ILE 118 3.177 -3.604 27.526 1.00 1.00 C ATOM 932 CG1 ILE 118 4.331 -1.397 28.214 1.00 1.00 C ATOM 933 CD1 ILE 118 3.744 -1.295 29.622 1.00 1.00 C ATOM 934 C ILE 118 5.213 -2.683 25.703 1.00 1.00 C ATOM 935 O ILE 118 6.273 -2.060 25.713 1.00 1.00 O ATOM 936 N LYS 119 5.162 -4.018 25.568 1.00 1.00 N ATOM 937 CA LYS 119 6.350 -4.813 25.526 1.00 1.00 C ATOM 938 CB LYS 119 6.035 -6.320 25.465 1.00 1.00 C ATOM 939 CG LYS 119 5.287 -6.833 26.697 1.00 1.00 C ATOM 940 CD LYS 119 4.667 -8.224 26.527 1.00 1.00 C ATOM 941 CE LYS 119 5.666 -9.371 26.683 1.00 1.00 C ATOM 942 NZ LYS 119 6.594 -9.391 25.530 1.00 1.00 N ATOM 943 C LYS 119 7.156 -4.481 24.310 1.00 1.00 C ATOM 944 O LYS 119 8.369 -4.293 24.402 1.00 1.00 O ATOM 945 N ARG 120 6.497 -4.379 23.141 1.00 1.00 N ATOM 946 CA ARG 120 7.243 -4.219 21.929 1.00 1.00 C ATOM 947 CB ARG 120 6.310 -4.051 20.718 1.00 1.00 C ATOM 948 CG ARG 120 7.003 -4.163 19.359 1.00 1.00 C ATOM 949 CD ARG 120 7.285 -5.606 18.938 1.00 1.00 C ATOM 950 NE ARG 120 5.968 -6.292 18.810 1.00 1.00 N ATOM 951 CZ ARG 120 5.260 -6.208 17.646 1.00 1.00 C ATOM 952 NH1 ARG 120 5.764 -5.510 16.587 1.00 1.00 H ATOM 953 NH2 ARG 120 4.044 -6.819 17.541 1.00 1.00 H ATOM 954 C ARG 120 8.078 -2.984 22.008 1.00 1.00 C ATOM 955 O ARG 120 9.306 -3.057 21.987 1.00 1.00 O ATOM 956 N SER 121 7.430 -1.809 22.120 1.00 1.00 N ATOM 957 CA SER 121 8.213 -0.612 22.199 1.00 1.00 C ATOM 958 CB SER 121 7.372 0.663 22.023 1.00 1.00 C ATOM 959 OG SER 121 8.200 1.811 22.113 1.00 1.00 O ATOM 960 C SER 121 8.853 -0.549 23.543 1.00 1.00 C ATOM 961 O SER 121 10.034 -0.843 23.722 1.00 1.00 O ATOM 962 N ARG 122 8.017 -0.175 24.526 1.00 1.00 N ATOM 963 CA ARG 122 8.358 -0.023 25.904 1.00 1.00 C ATOM 964 CB ARG 122 9.804 0.424 26.179 1.00 1.00 C ATOM 965 CG ARG 122 10.183 1.779 25.588 1.00 1.00 C ATOM 966 CD ARG 122 11.522 2.290 26.122 1.00 1.00 C ATOM 967 NE ARG 122 11.832 3.578 25.441 1.00 1.00 N ATOM 968 CZ ARG 122 12.325 4.624 26.166 1.00 1.00 C ATOM 969 NH1 ARG 122 12.435 4.520 27.523 1.00 1.00 H ATOM 970 NH2 ARG 122 12.716 5.767 25.530 1.00 1.00 H ATOM 971 C ARG 122 7.426 1.033 26.403 1.00 1.00 C ATOM 972 O ARG 122 6.473 1.394 25.714 1.00 1.00 O ATOM 973 N ASN 123 7.664 1.568 27.614 1.00 1.00 N ATOM 974 CA ASN 123 6.759 2.570 28.090 1.00 1.00 C ATOM 975 CB ASN 123 7.088 3.076 29.508 1.00 1.00 C ATOM 976 CG ASN 123 8.496 3.660 29.529 1.00 1.00 C ATOM 977 OD1 ASN 123 9.304 3.431 28.631 1.00 1.00 O ATOM 978 ND2 ASN 123 8.804 4.428 30.607 1.00 1.00 N ATOM 979 C ASN 123 6.794 3.720 27.134 1.00 1.00 C ATOM 980 O ASN 123 7.856 4.132 26.668 1.00 1.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 313 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 30.59 89.5 76 100.0 76 ARMSMC SECONDARY STRUCTURE . . 7.54 98.4 64 100.0 64 ARMSMC SURFACE . . . . . . . . 31.41 88.9 72 100.0 72 ARMSMC BURIED . . . . . . . . 4.22 100.0 4 100.0 4 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 90.13 38.2 34 100.0 34 ARMSSC1 RELIABLE SIDE CHAINS . 90.13 38.2 34 100.0 34 ARMSSC1 SECONDARY STRUCTURE . . 88.78 39.3 28 100.0 28 ARMSSC1 SURFACE . . . . . . . . 90.13 38.2 34 100.0 34 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 76.16 50.0 30 100.0 30 ARMSSC2 RELIABLE SIDE CHAINS . 69.09 56.5 23 100.0 23 ARMSSC2 SECONDARY STRUCTURE . . 77.35 54.2 24 100.0 24 ARMSSC2 SURFACE . . . . . . . . 76.16 50.0 30 100.0 30 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 81.98 35.7 14 100.0 14 ARMSSC3 RELIABLE SIDE CHAINS . 79.08 41.7 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 85.08 30.8 13 100.0 13 ARMSSC3 SURFACE . . . . . . . . 81.98 35.7 14 100.0 14 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 49.33 57.1 7 100.0 7 ARMSSC4 RELIABLE SIDE CHAINS . 49.33 57.1 7 100.0 7 ARMSSC4 SECONDARY STRUCTURE . . 50.41 66.7 6 100.0 6 ARMSSC4 SURFACE . . . . . . . . 49.33 57.1 7 100.0 7 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 2.30 (Number of atoms: 39) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 2.30 39 100.0 39 CRMSCA CRN = ALL/NP . . . . . 0.0591 CRMSCA SECONDARY STRUCTURE . . 1.80 32 100.0 32 CRMSCA SURFACE . . . . . . . . 2.36 37 100.0 37 CRMSCA BURIED . . . . . . . . 0.85 2 100.0 2 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 2.44 194 100.0 194 CRMSMC SECONDARY STRUCTURE . . 1.78 160 100.0 160 CRMSMC SURFACE . . . . . . . . 2.50 184 100.0 184 CRMSMC BURIED . . . . . . . . 0.90 10 100.0 10 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 4.47 157 100.0 157 CRMSSC RELIABLE SIDE CHAINS . 4.36 139 100.0 139 CRMSSC SECONDARY STRUCTURE . . 3.99 130 100.0 130 CRMSSC SURFACE . . . . . . . . 4.49 155 100.0 155 CRMSSC BURIED . . . . . . . . 1.42 2 100.0 2 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 3.56 313 100.0 313 CRMSALL SECONDARY STRUCTURE . . 3.04 258 100.0 258 CRMSALL SURFACE . . . . . . . . 3.61 303 100.0 303 CRMSALL BURIED . . . . . . . . 0.90 10 100.0 10 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.977 0.288 0.184 39 100.0 39 ERRCA SECONDARY STRUCTURE . . 0.787 0.272 0.173 32 100.0 32 ERRCA SURFACE . . . . . . . . 1.014 0.294 0.181 37 100.0 37 ERRCA BURIED . . . . . . . . 0.288 0.182 0.235 2 100.0 2 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.013 0.285 0.180 194 100.0 194 ERRMC SECONDARY STRUCTURE . . 0.764 0.267 0.170 160 100.0 160 ERRMC SURFACE . . . . . . . . 1.047 0.288 0.177 184 100.0 184 ERRMC BURIED . . . . . . . . 0.388 0.219 0.228 10 100.0 10 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.765 0.491 0.251 157 100.0 157 ERRSC RELIABLE SIDE CHAINS . 2.659 0.478 0.243 139 100.0 139 ERRSC SECONDARY STRUCTURE . . 2.460 0.477 0.246 130 100.0 130 ERRSC SURFACE . . . . . . . . 2.793 0.494 0.253 155 100.0 155 ERRSC BURIED . . . . . . . . 0.583 0.237 0.139 2 100.0 2 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.833 0.379 0.214 313 100.0 313 ERRALL SECONDARY STRUCTURE . . 1.554 0.362 0.205 258 100.0 258 ERRALL SURFACE . . . . . . . . 1.881 0.384 0.213 303 100.0 303 ERRALL BURIED . . . . . . . . 0.388 0.219 0.228 10 100.0 10 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 10 27 37 38 39 39 39 DISTCA CA (P) 25.64 69.23 94.87 97.44 100.00 39 DISTCA CA (RMS) 0.69 1.30 1.72 1.79 2.30 DISTCA ALL (N) 53 162 226 271 306 313 313 DISTALL ALL (P) 16.93 51.76 72.20 86.58 97.76 313 DISTALL ALL (RMS) 0.68 1.31 1.73 2.25 3.19 DISTALL END of the results output