####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 39 ( 313), selected 39 , name T0586TS278_1-D2 # Molecule2: number of CA atoms 39 ( 313), selected 39 , name T0586-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0586TS278_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 39 85 - 123 2.61 2.61 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 34 90 - 123 1.96 2.93 LCS_AVERAGE: 82.97 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 108 - 123 0.99 5.93 LCS_AVERAGE: 33.40 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 39 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT D 85 D 85 9 17 39 4 9 9 13 16 17 19 29 34 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT Q 86 Q 86 9 17 39 6 9 9 13 16 17 19 29 36 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 87 L 87 9 18 39 6 9 9 13 21 26 35 35 37 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 88 K 88 9 27 39 6 9 14 22 30 33 35 36 37 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 89 K 89 9 27 39 6 9 9 18 25 33 35 36 37 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 90 E 90 9 34 39 6 9 14 21 29 33 35 36 37 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 91 L 91 9 34 39 6 9 15 24 30 33 35 36 37 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 92 A 92 9 34 39 7 10 17 24 30 33 35 36 37 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT D 93 D 93 9 34 39 7 10 17 24 30 33 35 36 37 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 94 A 94 7 34 39 7 10 17 24 30 33 35 36 37 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 95 I 95 8 34 39 3 6 11 24 30 33 35 36 37 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT T 96 T 96 13 34 39 3 6 13 16 25 31 34 36 37 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 97 E 97 13 34 39 3 12 13 16 25 30 34 36 37 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT R 98 R 98 13 34 39 3 12 14 23 30 33 35 36 37 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT F 99 F 99 13 34 39 5 12 14 23 30 33 35 36 37 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 100 L 100 13 34 39 5 12 14 21 29 33 35 36 37 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 101 E 101 13 34 39 5 12 14 21 30 33 35 36 37 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 102 E 102 13 34 39 5 12 17 24 30 33 35 36 37 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 103 A 103 13 34 39 7 12 17 24 30 33 35 36 37 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 104 K 104 13 34 39 7 12 17 24 30 33 35 36 37 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT S 105 S 105 13 34 39 6 12 17 24 30 33 35 36 37 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 106 I 106 13 34 39 7 12 17 24 30 33 35 36 37 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT G 107 G 107 13 34 39 5 12 17 24 30 33 35 36 37 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 108 L 108 16 34 39 4 12 17 24 30 33 35 36 37 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT D 109 D 109 16 34 39 3 9 17 24 30 33 35 36 37 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT D 110 D 110 16 34 39 3 6 17 24 30 33 35 36 37 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT Q 111 Q 111 16 34 39 3 10 17 24 30 33 35 36 37 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT T 112 T 112 16 34 39 7 10 17 24 30 33 35 36 37 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 113 A 113 16 34 39 9 10 17 24 30 33 35 36 37 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 114 I 114 16 34 39 9 10 17 24 30 33 35 36 37 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 115 E 115 16 34 39 9 10 17 22 30 33 35 36 37 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 116 L 116 16 34 39 9 10 17 24 30 33 35 36 37 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 117 L 117 16 34 39 9 10 17 24 30 33 35 36 37 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 118 I 118 16 34 39 9 10 17 24 30 33 35 36 37 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 119 K 119 16 34 39 9 10 17 24 30 33 35 36 37 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT R 120 R 120 16 34 39 9 10 17 24 30 33 35 36 37 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT S 121 S 121 16 34 39 5 10 17 24 30 33 35 36 37 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT R 122 R 122 16 34 39 9 10 17 24 30 33 35 36 37 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT N 123 N 123 16 34 39 5 6 17 24 30 33 35 36 37 39 39 39 39 39 39 39 39 39 39 39 LCS_AVERAGE LCS_A: 72.12 ( 33.40 82.97 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 12 17 24 30 33 35 36 37 39 39 39 39 39 39 39 39 39 39 39 GDT PERCENT_AT 23.08 30.77 43.59 61.54 76.92 84.62 89.74 92.31 94.87 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.22 0.63 1.03 1.38 1.65 1.82 2.03 2.08 2.22 2.61 2.61 2.61 2.61 2.61 2.61 2.61 2.61 2.61 2.61 2.61 GDT RMS_ALL_AT 7.65 5.32 5.29 2.88 2.91 2.77 2.66 2.78 2.69 2.61 2.61 2.61 2.61 2.61 2.61 2.61 2.61 2.61 2.61 2.61 # Checking swapping # possible swapping detected: E 90 E 90 # possible swapping detected: D 93 D 93 # possible swapping detected: E 115 E 115 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA D 85 D 85 7.866 0 0.135 0.177 10.235 8.810 4.940 LGA Q 86 Q 86 7.377 0 0.093 0.982 9.412 13.929 7.619 LGA L 87 L 87 5.388 0 0.062 1.397 8.821 34.167 21.607 LGA K 88 K 88 2.624 0 0.153 0.735 7.233 55.595 44.762 LGA K 89 K 89 3.806 0 0.050 0.661 7.584 48.452 31.005 LGA E 90 E 90 3.172 0 0.065 0.879 4.230 57.381 51.852 LGA L 91 L 91 1.768 0 0.051 0.784 2.130 77.381 76.190 LGA A 92 A 92 1.091 0 0.207 0.203 2.019 88.214 83.524 LGA D 93 D 93 1.000 0 0.121 0.118 1.434 85.952 87.083 LGA A 94 A 94 1.097 0 0.070 0.068 1.524 83.690 81.524 LGA I 95 I 95 2.227 0 0.039 0.168 3.837 63.333 55.893 LGA T 96 T 96 4.071 0 0.055 1.131 7.082 38.929 37.415 LGA E 97 E 97 3.905 0 0.096 0.946 7.009 41.786 31.376 LGA R 98 R 98 2.345 0 0.110 1.031 4.179 62.857 59.740 LGA F 99 F 99 2.334 0 0.096 0.163 2.886 64.762 62.684 LGA L 100 L 100 2.743 0 0.228 0.221 3.293 55.357 56.250 LGA E 101 E 101 2.528 0 0.057 0.992 5.912 62.976 49.259 LGA E 102 E 102 1.334 0 0.117 0.643 1.928 81.548 82.540 LGA A 103 A 103 0.931 0 0.099 0.092 1.114 88.214 86.857 LGA K 104 K 104 0.877 0 0.046 0.346 1.972 88.214 85.503 LGA S 105 S 105 1.281 0 0.124 0.288 1.673 79.286 78.571 LGA I 106 I 106 0.682 0 0.289 1.346 2.803 86.071 77.679 LGA G 107 G 107 0.701 0 0.130 0.130 0.806 92.857 92.857 LGA L 108 L 108 1.362 0 0.064 0.930 3.308 77.143 75.417 LGA D 109 D 109 1.436 0 0.040 0.945 4.196 81.429 69.821 LGA D 110 D 110 1.977 0 0.048 0.774 4.685 72.857 58.512 LGA Q 111 Q 111 1.286 0 0.251 0.807 2.268 77.262 75.820 LGA T 112 T 112 0.704 0 0.046 0.113 1.833 95.238 88.095 LGA A 113 A 113 1.013 0 0.198 0.194 1.324 86.071 85.143 LGA I 114 I 114 2.379 0 0.060 1.032 5.187 66.786 52.381 LGA E 115 E 115 2.444 0 0.055 0.762 5.088 68.810 53.016 LGA L 116 L 116 1.558 0 0.073 0.298 2.035 75.000 72.917 LGA L 117 L 117 1.821 0 0.062 1.267 6.087 75.000 60.238 LGA I 118 I 118 1.708 0 0.067 0.151 3.093 77.143 68.155 LGA K 119 K 119 1.728 0 0.063 1.404 4.990 75.000 66.614 LGA R 120 R 120 2.358 0 0.049 1.069 7.431 64.881 47.965 LGA S 121 S 121 2.215 0 0.082 0.630 2.901 68.810 66.190 LGA R 122 R 122 1.317 0 0.146 1.260 7.284 75.000 52.814 LGA N 123 N 123 1.973 0 0.376 1.141 6.227 48.571 54.226 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 39 156 156 100.00 313 313 100.00 39 SUMMARY(RMSD_GDC): 2.614 2.613 3.346 67.814 61.386 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 39 39 4.0 36 2.08 71.154 79.672 1.650 LGA_LOCAL RMSD: 2.082 Number of atoms: 36 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.780 Number of assigned atoms: 39 Std_ASGN_ATOMS RMSD: 2.614 Standard rmsd on all 39 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.545173 * X + -0.135445 * Y + 0.827310 * Z + -4.269977 Y_new = 0.091454 * X + -0.971363 * Y + -0.219294 * Z + 81.875496 Z_new = 0.833320 * X + 0.195214 * Y + -0.517174 * Z + -8.273335 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.166204 -0.985087 2.780665 [DEG: 9.5228 -56.4413 159.3204 ] ZXZ: 1.311686 2.114342 1.340686 [DEG: 75.1541 121.1429 76.8156 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0586TS278_1-D2 REMARK 2: T0586-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0586TS278_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 39 39 4.0 36 2.08 79.672 2.61 REMARK ---------------------------------------------------------- MOLECULE T0586TS278_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0586 REMARK MODEL 1 REMARK PARENT 3ic7_A ATOM 668 N ASP 85 6.657 16.375 20.734 1.00 0.00 N ATOM 669 CA ASP 85 5.970 15.101 21.133 1.00 0.00 C ATOM 670 C ASP 85 4.378 15.147 21.050 1.00 0.00 C ATOM 671 O ASP 85 3.727 14.100 21.062 1.00 0.00 O ATOM 672 CB ASP 85 6.435 14.694 22.566 1.00 0.00 C ATOM 673 CG ASP 85 7.886 14.270 22.833 1.00 0.00 C ATOM 674 OD1 ASP 85 8.374 14.534 23.951 1.00 0.00 O ATOM 675 OD2 ASP 85 8.533 13.677 21.947 1.00 0.00 O ATOM 676 N GLN 86 3.754 16.343 21.001 1.00 0.00 N ATOM 677 CA GLN 86 2.282 16.546 20.853 1.00 0.00 C ATOM 678 C GLN 86 1.790 16.590 19.363 1.00 0.00 C ATOM 679 O GLN 86 0.865 15.856 19.011 1.00 0.00 O ATOM 680 CB GLN 86 1.962 17.843 21.649 1.00 0.00 C ATOM 681 CG GLN 86 0.458 18.153 21.865 1.00 0.00 C ATOM 682 CD GLN 86 0.208 19.292 22.854 1.00 0.00 C ATOM 683 OE1 GLN 86 0.240 19.102 24.064 1.00 0.00 O ATOM 684 NE2 GLN 86 -0.012 20.495 22.403 1.00 0.00 N ATOM 685 N LEU 87 2.398 17.413 18.479 1.00 0.00 N ATOM 686 CA LEU 87 2.013 17.505 17.036 1.00 0.00 C ATOM 687 C LEU 87 2.144 16.163 16.231 1.00 0.00 C ATOM 688 O LEU 87 1.248 15.850 15.440 1.00 0.00 O ATOM 689 CB LEU 87 2.765 18.678 16.341 1.00 0.00 C ATOM 690 CG LEU 87 2.572 20.124 16.875 1.00 0.00 C ATOM 691 CD1 LEU 87 3.361 21.103 15.991 1.00 0.00 C ATOM 692 CD2 LEU 87 1.099 20.562 16.934 1.00 0.00 C ATOM 693 N LYS 88 3.234 15.377 16.402 1.00 0.00 N ATOM 694 CA LYS 88 3.294 13.988 15.844 1.00 0.00 C ATOM 695 C LYS 88 2.394 12.927 16.628 1.00 0.00 C ATOM 696 O LYS 88 2.143 11.866 16.054 1.00 0.00 O ATOM 697 CB LYS 88 4.759 13.566 15.487 1.00 0.00 C ATOM 698 CG LYS 88 5.421 14.314 14.277 1.00 0.00 C ATOM 699 CD LYS 88 6.552 13.530 13.546 1.00 0.00 C ATOM 700 CE LYS 88 7.199 14.252 12.320 1.00 0.00 C ATOM 701 NZ LYS 88 7.569 13.267 11.271 1.00 0.00 N ATOM 702 N LYS 89 1.856 13.184 17.858 1.00 0.00 N ATOM 703 CA LYS 89 0.811 12.313 18.509 1.00 0.00 C ATOM 704 C LYS 89 -0.581 12.440 17.773 1.00 0.00 C ATOM 705 O LYS 89 -1.140 11.395 17.433 1.00 0.00 O ATOM 706 CB LYS 89 0.751 12.477 20.066 1.00 0.00 C ATOM 707 CG LYS 89 -0.257 11.528 20.796 1.00 0.00 C ATOM 708 CD LYS 89 -0.204 11.491 22.349 1.00 0.00 C ATOM 709 CE LYS 89 -1.381 10.708 23.008 1.00 0.00 C ATOM 710 NZ LYS 89 -1.135 10.522 24.458 1.00 0.00 N ATOM 711 N GLU 90 -1.149 13.644 17.476 1.00 0.00 N ATOM 712 CA GLU 90 -2.367 13.734 16.589 1.00 0.00 C ATOM 713 C GLU 90 -2.132 13.241 15.103 1.00 0.00 C ATOM 714 O GLU 90 -3.043 12.720 14.455 1.00 0.00 O ATOM 715 CB GLU 90 -3.185 15.053 16.739 1.00 0.00 C ATOM 716 CG GLU 90 -2.895 16.255 15.788 1.00 0.00 C ATOM 717 CD GLU 90 -4.107 16.841 15.072 1.00 0.00 C ATOM 718 OE1 GLU 90 -4.595 17.897 15.512 1.00 0.00 O ATOM 719 OE2 GLU 90 -4.539 16.298 14.042 1.00 0.00 O ATOM 720 N LEU 91 -0.900 13.362 14.559 1.00 0.00 N ATOM 721 CA LEU 91 -0.496 12.695 13.278 1.00 0.00 C ATOM 722 C LEU 91 -0.555 11.116 13.394 1.00 0.00 C ATOM 723 O LEU 91 -1.036 10.440 12.476 1.00 0.00 O ATOM 724 CB LEU 91 0.879 13.264 12.825 1.00 0.00 C ATOM 725 CG LEU 91 1.075 13.490 11.304 1.00 0.00 C ATOM 726 CD1 LEU 91 2.389 14.253 11.069 1.00 0.00 C ATOM 727 CD2 LEU 91 1.086 12.197 10.471 1.00 0.00 C ATOM 728 N ALA 92 -0.135 10.528 14.537 1.00 0.00 N ATOM 729 CA ALA 92 -0.378 9.098 14.877 1.00 0.00 C ATOM 730 C ALA 92 -1.884 8.651 15.063 1.00 0.00 C ATOM 731 O ALA 92 -2.140 7.449 15.197 1.00 0.00 O ATOM 732 CB ALA 92 0.501 8.801 16.106 1.00 0.00 C ATOM 733 N ASP 93 -2.898 9.551 15.005 1.00 0.00 N ATOM 734 CA ASP 93 -4.346 9.161 14.951 1.00 0.00 C ATOM 735 C ASP 93 -4.771 8.275 13.715 1.00 0.00 C ATOM 736 O ASP 93 -5.810 7.609 13.760 1.00 0.00 O ATOM 737 CB ASP 93 -5.257 10.404 15.119 1.00 0.00 C ATOM 738 CG ASP 93 -5.208 11.117 16.459 1.00 0.00 C ATOM 739 OD1 ASP 93 -5.471 12.334 16.506 1.00 0.00 O ATOM 740 OD2 ASP 93 -5.003 10.459 17.501 1.00 0.00 O ATOM 741 N ALA 94 -3.965 8.232 12.632 1.00 0.00 N ATOM 742 CA ALA 94 -4.096 7.235 11.535 1.00 0.00 C ATOM 743 C ALA 94 -4.077 5.728 11.998 1.00 0.00 C ATOM 744 O ALA 94 -4.731 4.897 11.375 1.00 0.00 O ATOM 745 CB ALA 94 -2.949 7.564 10.561 1.00 0.00 C ATOM 746 N ILE 95 -3.383 5.381 13.106 1.00 0.00 N ATOM 747 CA ILE 95 -3.443 4.032 13.767 1.00 0.00 C ATOM 748 C ILE 95 -4.924 3.636 14.175 1.00 0.00 C ATOM 749 O ILE 95 -5.331 2.492 13.978 1.00 0.00 O ATOM 750 CB ILE 95 -2.419 3.992 14.967 1.00 0.00 C ATOM 751 CG1 ILE 95 -0.942 4.321 14.577 1.00 0.00 C ATOM 752 CG2 ILE 95 -2.418 2.642 15.733 1.00 0.00 C ATOM 753 CD1 ILE 95 -0.024 4.697 15.758 1.00 0.00 C ATOM 754 N THR 96 -5.749 4.561 14.701 1.00 0.00 N ATOM 755 CA THR 96 -7.202 4.310 14.981 1.00 0.00 C ATOM 756 C THR 96 -8.041 3.962 13.686 1.00 0.00 C ATOM 757 O THR 96 -8.834 3.017 13.714 1.00 0.00 O ATOM 758 CB THR 96 -7.731 5.501 15.841 1.00 0.00 C ATOM 759 OG1 THR 96 -6.986 5.588 17.057 1.00 0.00 O ATOM 760 CG2 THR 96 -9.197 5.398 16.283 1.00 0.00 C ATOM 761 N GLU 97 -7.862 4.672 12.553 1.00 0.00 N ATOM 762 CA GLU 97 -8.513 4.320 11.243 1.00 0.00 C ATOM 763 C GLU 97 -7.889 3.077 10.486 1.00 0.00 C ATOM 764 O GLU 97 -8.623 2.287 9.883 1.00 0.00 O ATOM 765 CB GLU 97 -8.715 5.640 10.415 1.00 0.00 C ATOM 766 CG GLU 97 -8.152 5.802 8.969 1.00 0.00 C ATOM 767 CD GLU 97 -8.790 5.026 7.829 1.00 0.00 C ATOM 768 OE1 GLU 97 -8.070 4.575 6.922 1.00 0.00 O ATOM 769 OE2 GLU 97 -10.030 4.933 7.771 1.00 0.00 O ATOM 770 N ARG 98 -6.562 2.883 10.547 1.00 0.00 N ATOM 771 CA ARG 98 -5.818 1.824 9.802 1.00 0.00 C ATOM 772 C ARG 98 -5.518 0.532 10.647 1.00 0.00 C ATOM 773 O ARG 98 -5.927 -0.560 10.241 1.00 0.00 O ATOM 774 CB ARG 98 -4.553 2.483 9.163 1.00 0.00 C ATOM 775 CG ARG 98 -4.769 3.763 8.303 1.00 0.00 C ATOM 776 CD ARG 98 -3.470 4.409 7.804 1.00 0.00 C ATOM 777 NE ARG 98 -3.762 5.785 7.289 1.00 0.00 N ATOM 778 CZ ARG 98 -3.032 6.441 6.399 1.00 0.00 C ATOM 779 NH1 ARG 98 -2.035 5.923 5.753 1.00 0.00 H ATOM 780 NH2 ARG 98 -3.343 7.665 6.153 1.00 0.00 H ATOM 781 N PHE 99 -4.829 0.617 11.808 1.00 0.00 N ATOM 782 CA PHE 99 -4.556 -0.566 12.691 1.00 0.00 C ATOM 783 C PHE 99 -5.826 -1.247 13.308 1.00 0.00 C ATOM 784 O PHE 99 -5.851 -2.478 13.387 1.00 0.00 O ATOM 785 CB PHE 99 -3.490 -0.189 13.757 1.00 0.00 C ATOM 786 CG PHE 99 -3.046 -1.315 14.711 1.00 0.00 C ATOM 787 CD1 PHE 99 -2.263 -2.370 14.237 1.00 0.00 C ATOM 788 CD2 PHE 99 -3.469 -1.322 16.046 1.00 0.00 C ATOM 789 CE1 PHE 99 -1.904 -3.417 15.083 1.00 0.00 C ATOM 790 CE2 PHE 99 -3.110 -2.369 16.892 1.00 0.00 C ATOM 791 CZ PHE 99 -2.322 -3.414 16.412 1.00 0.00 C ATOM 792 N LEU 100 -6.877 -0.508 13.721 1.00 0.00 N ATOM 793 CA LEU 100 -8.165 -1.144 14.165 1.00 0.00 C ATOM 794 C LEU 100 -9.018 -1.869 13.033 1.00 0.00 C ATOM 795 O LEU 100 -10.145 -2.311 13.269 1.00 0.00 O ATOM 796 CB LEU 100 -8.983 -0.153 15.036 1.00 0.00 C ATOM 797 CG LEU 100 -8.316 0.450 16.304 1.00 0.00 C ATOM 798 CD1 LEU 100 -9.277 1.447 16.970 1.00 0.00 C ATOM 799 CD2 LEU 100 -7.907 -0.614 17.338 1.00 0.00 C ATOM 800 N GLU 101 -8.487 -1.972 11.806 1.00 0.00 N ATOM 801 CA GLU 101 -8.954 -2.875 10.720 1.00 0.00 C ATOM 802 C GLU 101 -7.956 -4.094 10.626 1.00 0.00 C ATOM 803 O GLU 101 -8.405 -5.243 10.629 1.00 0.00 O ATOM 804 CB GLU 101 -9.087 -2.092 9.390 1.00 0.00 C ATOM 805 CG GLU 101 -10.319 -1.150 9.327 1.00 0.00 C ATOM 806 CD GLU 101 -10.507 -0.366 8.052 1.00 0.00 C ATOM 807 OE1 GLU 101 -11.179 0.679 8.104 1.00 0.00 O ATOM 808 OE2 GLU 101 -10.076 -0.803 6.971 1.00 0.00 O ATOM 809 N GLU 102 -6.617 -3.871 10.591 1.00 0.00 N ATOM 810 CA GLU 102 -5.575 -4.943 10.657 1.00 0.00 C ATOM 811 C GLU 102 -5.733 -5.929 11.877 1.00 0.00 C ATOM 812 O GLU 102 -5.917 -7.134 11.684 1.00 0.00 O ATOM 813 CB GLU 102 -4.147 -4.314 10.698 1.00 0.00 C ATOM 814 CG GLU 102 -3.727 -3.336 9.577 1.00 0.00 C ATOM 815 CD GLU 102 -2.280 -2.914 9.673 1.00 0.00 C ATOM 816 OE1 GLU 102 -1.901 -2.217 10.635 1.00 0.00 O ATOM 817 OE2 GLU 102 -1.486 -3.252 8.777 1.00 0.00 O ATOM 818 N ALA 103 -5.682 -5.400 13.114 1.00 0.00 N ATOM 819 CA ALA 103 -5.881 -6.172 14.367 1.00 0.00 C ATOM 820 C ALA 103 -7.315 -6.753 14.600 1.00 0.00 C ATOM 821 O ALA 103 -7.456 -7.882 15.077 1.00 0.00 O ATOM 822 CB ALA 103 -5.457 -5.203 15.486 1.00 0.00 C ATOM 823 N LYS 104 -8.370 -5.988 14.265 1.00 0.00 N ATOM 824 CA LYS 104 -9.784 -6.454 14.343 1.00 0.00 C ATOM 825 C LYS 104 -10.136 -7.626 13.350 1.00 0.00 C ATOM 826 O LYS 104 -10.840 -8.562 13.737 1.00 0.00 O ATOM 827 CB LYS 104 -10.666 -5.191 14.169 1.00 0.00 C ATOM 828 CG LYS 104 -12.088 -5.331 14.744 1.00 0.00 C ATOM 829 CD LYS 104 -13.100 -4.354 14.113 1.00 0.00 C ATOM 830 CE LYS 104 -14.484 -4.573 14.739 1.00 0.00 C ATOM 831 NZ LYS 104 -15.539 -3.814 14.015 1.00 0.00 N ATOM 832 N SER 105 -9.660 -7.587 12.088 1.00 0.00 N ATOM 833 CA SER 105 -9.773 -8.728 11.128 1.00 0.00 C ATOM 834 C SER 105 -9.012 -10.033 11.561 1.00 0.00 C ATOM 835 O SER 105 -9.569 -11.128 11.449 1.00 0.00 O ATOM 836 CB SER 105 -9.377 -8.239 9.713 1.00 0.00 C ATOM 837 OG SER 105 -8.065 -7.670 9.661 1.00 0.00 O ATOM 838 N ILE 106 -7.772 -9.941 12.081 1.00 0.00 N ATOM 839 CA ILE 106 -7.040 -11.112 12.681 1.00 0.00 C ATOM 840 C ILE 106 -7.781 -11.684 13.959 1.00 0.00 C ATOM 841 O ILE 106 -7.926 -12.901 14.100 1.00 0.00 O ATOM 842 CB ILE 106 -5.535 -10.731 12.970 1.00 0.00 C ATOM 843 CG1 ILE 106 -4.727 -10.296 11.713 1.00 0.00 C ATOM 844 CG2 ILE 106 -4.729 -11.866 13.661 1.00 0.00 C ATOM 845 CD1 ILE 106 -3.493 -9.421 12.021 1.00 0.00 C ATOM 846 N GLY 107 -8.208 -10.811 14.885 1.00 0.00 N ATOM 847 CA GLY 107 -8.923 -11.191 16.136 1.00 0.00 C ATOM 848 C GLY 107 -8.173 -10.892 17.452 1.00 0.00 C ATOM 849 O GLY 107 -8.102 -11.753 18.332 1.00 0.00 O ATOM 850 N LEU 108 -7.644 -9.672 17.606 1.00 0.00 N ATOM 851 CA LEU 108 -6.887 -9.251 18.814 1.00 0.00 C ATOM 852 C LEU 108 -7.829 -8.539 19.837 1.00 0.00 C ATOM 853 O LEU 108 -8.540 -7.591 19.489 1.00 0.00 O ATOM 854 CB LEU 108 -5.739 -8.276 18.399 1.00 0.00 C ATOM 855 CG LEU 108 -4.411 -8.870 17.858 1.00 0.00 C ATOM 856 CD1 LEU 108 -4.547 -9.546 16.488 1.00 0.00 C ATOM 857 CD2 LEU 108 -3.354 -7.754 17.743 1.00 0.00 C ATOM 858 N ASP 109 -7.827 -8.989 21.101 1.00 0.00 N ATOM 859 CA ASP 109 -8.537 -8.284 22.207 1.00 0.00 C ATOM 860 C ASP 109 -7.758 -6.986 22.645 1.00 0.00 C ATOM 861 O ASP 109 -6.594 -6.774 22.273 1.00 0.00 O ATOM 862 CB ASP 109 -8.673 -9.331 23.342 1.00 0.00 C ATOM 863 CG ASP 109 -9.712 -9.026 24.410 1.00 0.00 C ATOM 864 OD1 ASP 109 -10.892 -9.364 24.207 1.00 0.00 O ATOM 865 OD2 ASP 109 -9.341 -8.557 25.504 1.00 0.00 O ATOM 866 N ASP 110 -8.378 -6.105 23.451 1.00 0.00 N ATOM 867 CA ASP 110 -7.659 -4.912 24.014 1.00 0.00 C ATOM 868 C ASP 110 -6.369 -5.263 24.860 1.00 0.00 C ATOM 869 O ASP 110 -5.318 -4.629 24.718 1.00 0.00 O ATOM 870 CB ASP 110 -8.702 -4.075 24.788 1.00 0.00 C ATOM 871 CG ASP 110 -8.303 -2.625 24.953 1.00 0.00 C ATOM 872 OD1 ASP 110 -8.396 -1.865 23.970 1.00 0.00 O ATOM 873 OD2 ASP 110 -7.899 -2.197 26.048 1.00 0.00 O ATOM 874 N GLN 111 -6.466 -6.324 25.674 1.00 0.00 N ATOM 875 CA GLN 111 -5.337 -6.907 26.447 1.00 0.00 C ATOM 876 C GLN 111 -4.369 -7.860 25.629 1.00 0.00 C ATOM 877 O GLN 111 -3.400 -8.369 26.197 1.00 0.00 O ATOM 878 CB GLN 111 -5.984 -7.642 27.659 1.00 0.00 C ATOM 879 CG GLN 111 -6.671 -6.793 28.777 1.00 0.00 C ATOM 880 CD GLN 111 -7.949 -5.990 28.475 1.00 0.00 C ATOM 881 OE1 GLN 111 -8.072 -4.822 28.830 1.00 0.00 O ATOM 882 NE2 GLN 111 -8.945 -6.559 27.844 1.00 0.00 N ATOM 883 N THR 112 -4.583 -8.107 24.319 1.00 0.00 N ATOM 884 CA THR 112 -3.658 -8.916 23.461 1.00 0.00 C ATOM 885 C THR 112 -2.404 -8.106 22.986 1.00 0.00 C ATOM 886 O THR 112 -1.275 -8.585 23.138 1.00 0.00 O ATOM 887 CB THR 112 -4.464 -9.597 22.310 1.00 0.00 C ATOM 888 OG1 THR 112 -5.463 -10.451 22.854 1.00 0.00 O ATOM 889 CG2 THR 112 -3.645 -10.502 21.378 1.00 0.00 C ATOM 890 N ALA 113 -2.586 -6.898 22.421 1.00 0.00 N ATOM 891 CA ALA 113 -1.456 -6.012 22.024 1.00 0.00 C ATOM 892 C ALA 113 -0.630 -5.310 23.170 1.00 0.00 C ATOM 893 O ALA 113 0.438 -4.765 22.880 1.00 0.00 O ATOM 894 CB ALA 113 -2.064 -5.003 21.033 1.00 0.00 C ATOM 895 N ILE 114 -1.069 -5.321 24.448 1.00 0.00 N ATOM 896 CA ILE 114 -0.305 -4.715 25.590 1.00 0.00 C ATOM 897 C ILE 114 1.072 -5.406 25.934 1.00 0.00 C ATOM 898 O ILE 114 2.034 -4.686 26.209 1.00 0.00 O ATOM 899 CB ILE 114 -1.254 -4.404 26.799 1.00 0.00 C ATOM 900 CG1 ILE 114 -0.632 -3.367 27.777 1.00 0.00 C ATOM 901 CG2 ILE 114 -1.725 -5.672 27.549 1.00 0.00 C ATOM 902 CD1 ILE 114 -1.638 -2.642 28.688 1.00 0.00 C ATOM 903 N GLU 115 1.198 -6.754 25.899 1.00 0.00 N ATOM 904 CA GLU 115 2.528 -7.459 25.983 1.00 0.00 C ATOM 905 C GLU 115 3.548 -6.971 24.882 1.00 0.00 C ATOM 906 O GLU 115 4.691 -6.624 25.193 1.00 0.00 O ATOM 907 CB GLU 115 2.253 -8.996 25.959 1.00 0.00 C ATOM 908 CG GLU 115 3.469 -9.966 25.800 1.00 0.00 C ATOM 909 CD GLU 115 4.546 -10.021 26.869 1.00 0.00 C ATOM 910 OE1 GLU 115 5.639 -10.534 26.582 1.00 0.00 O ATOM 911 OE2 GLU 115 4.299 -9.626 28.024 1.00 0.00 O ATOM 912 N LEU 116 3.102 -6.903 23.611 1.00 0.00 N ATOM 913 CA LEU 116 3.877 -6.306 22.486 1.00 0.00 C ATOM 914 C LEU 116 4.259 -4.799 22.731 1.00 0.00 C ATOM 915 O LEU 116 5.438 -4.468 22.633 1.00 0.00 O ATOM 916 CB LEU 116 3.076 -6.537 21.170 1.00 0.00 C ATOM 917 CG LEU 116 2.900 -8.005 20.688 1.00 0.00 C ATOM 918 CD1 LEU 116 1.854 -8.061 19.564 1.00 0.00 C ATOM 919 CD2 LEU 116 4.224 -8.599 20.175 1.00 0.00 C ATOM 920 N LEU 117 3.316 -3.908 23.108 1.00 0.00 N ATOM 921 CA LEU 117 3.612 -2.495 23.514 1.00 0.00 C ATOM 922 C LEU 117 4.640 -2.340 24.700 1.00 0.00 C ATOM 923 O LEU 117 5.587 -1.551 24.589 1.00 0.00 O ATOM 924 CB LEU 117 2.224 -1.816 23.736 1.00 0.00 C ATOM 925 CG LEU 117 2.110 -0.329 24.173 1.00 0.00 C ATOM 926 CD1 LEU 117 2.279 -0.136 25.690 1.00 0.00 C ATOM 927 CD2 LEU 117 3.042 0.631 23.414 1.00 0.00 C ATOM 928 N ILE 118 4.495 -3.095 25.809 1.00 0.00 N ATOM 929 CA ILE 118 5.478 -3.103 26.946 1.00 0.00 C ATOM 930 C ILE 118 6.905 -3.574 26.471 1.00 0.00 C ATOM 931 O ILE 118 7.885 -2.854 26.689 1.00 0.00 O ATOM 932 CB ILE 118 4.892 -3.877 28.186 1.00 0.00 C ATOM 933 CG1 ILE 118 3.628 -3.185 28.788 1.00 0.00 C ATOM 934 CG2 ILE 118 5.925 -4.070 29.334 1.00 0.00 C ATOM 935 CD1 ILE 118 2.740 -4.108 29.640 1.00 0.00 C ATOM 936 N LYS 119 7.025 -4.735 25.797 1.00 0.00 N ATOM 937 CA LYS 119 8.306 -5.207 25.190 1.00 0.00 C ATOM 938 C LYS 119 8.922 -4.253 24.098 1.00 0.00 C ATOM 939 O LYS 119 10.140 -4.058 24.097 1.00 0.00 O ATOM 940 CB LYS 119 8.107 -6.672 24.712 1.00 0.00 C ATOM 941 CG LYS 119 8.419 -7.769 25.761 1.00 0.00 C ATOM 942 CD LYS 119 7.516 -7.789 27.009 1.00 0.00 C ATOM 943 CE LYS 119 7.925 -8.919 27.969 1.00 0.00 C ATOM 944 NZ LYS 119 6.856 -9.123 28.979 1.00 0.00 N ATOM 945 N ARG 120 8.109 -3.638 23.216 1.00 0.00 N ATOM 946 CA ARG 120 8.541 -2.555 22.275 1.00 0.00 C ATOM 947 C ARG 120 9.230 -1.326 22.985 1.00 0.00 C ATOM 948 O ARG 120 10.214 -0.783 22.479 1.00 0.00 O ATOM 949 CB ARG 120 7.254 -2.161 21.484 1.00 0.00 C ATOM 950 CG ARG 120 7.393 -1.203 20.278 1.00 0.00 C ATOM 951 CD ARG 120 7.922 -1.904 19.020 1.00 0.00 C ATOM 952 NE ARG 120 8.011 -0.927 17.903 1.00 0.00 N ATOM 953 CZ ARG 120 8.625 -1.148 16.750 1.00 0.00 C ATOM 954 NH1 ARG 120 9.070 -2.310 16.382 1.00 0.00 H ATOM 955 NH2 ARG 120 8.791 -0.155 15.944 1.00 0.00 H ATOM 956 N SER 121 8.706 -0.873 24.141 1.00 0.00 N ATOM 957 CA SER 121 9.359 0.160 24.996 1.00 0.00 C ATOM 958 C SER 121 10.633 -0.335 25.777 1.00 0.00 C ATOM 959 O SER 121 11.679 0.315 25.711 1.00 0.00 O ATOM 960 CB SER 121 8.272 0.759 25.925 1.00 0.00 C ATOM 961 OG SER 121 7.819 -0.154 26.931 1.00 0.00 O ATOM 962 N ARG 122 10.561 -1.487 26.478 1.00 0.00 N ATOM 963 CA ARG 122 11.687 -2.033 27.291 1.00 0.00 C ATOM 964 C ARG 122 12.914 -2.641 26.522 1.00 0.00 C ATOM 965 O ARG 122 14.019 -2.627 27.066 1.00 0.00 O ATOM 966 CB ARG 122 11.061 -3.006 28.332 1.00 0.00 C ATOM 967 CG ARG 122 11.910 -3.190 29.614 1.00 0.00 C ATOM 968 CD ARG 122 11.206 -4.073 30.662 1.00 0.00 C ATOM 969 NE ARG 122 11.898 -3.998 31.981 1.00 0.00 N ATOM 970 CZ ARG 122 11.608 -3.153 32.961 1.00 0.00 C ATOM 971 NH1 ARG 122 10.802 -2.148 32.843 1.00 0.00 H ATOM 972 NH2 ARG 122 12.174 -3.340 34.101 1.00 0.00 H ATOM 973 N ASN 123 12.759 -3.145 25.279 1.00 0.00 N ATOM 974 CA ASN 123 13.902 -3.644 24.444 1.00 0.00 C ATOM 975 C ASN 123 15.058 -2.605 24.155 1.00 0.00 C ATOM 976 O ASN 123 16.211 -3.005 23.988 1.00 0.00 O ATOM 977 CB ASN 123 13.265 -4.237 23.156 1.00 0.00 C ATOM 978 CG ASN 123 14.195 -5.067 22.269 1.00 0.00 C ATOM 979 OD1 ASN 123 14.730 -6.091 22.673 1.00 0.00 O ATOM 980 ND2 ASN 123 14.396 -4.688 21.038 1.00 0.00 N TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 313 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 23.10 86.8 76 100.0 76 ARMSMC SECONDARY STRUCTURE . . 15.68 90.6 64 100.0 64 ARMSMC SURFACE . . . . . . . . 23.31 87.5 72 100.0 72 ARMSMC BURIED . . . . . . . . 18.97 75.0 4 100.0 4 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 74.05 50.0 34 100.0 34 ARMSSC1 RELIABLE SIDE CHAINS . 74.05 50.0 34 100.0 34 ARMSSC1 SECONDARY STRUCTURE . . 65.73 57.1 28 100.0 28 ARMSSC1 SURFACE . . . . . . . . 74.05 50.0 34 100.0 34 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 66.98 56.7 30 100.0 30 ARMSSC2 RELIABLE SIDE CHAINS . 59.94 56.5 23 100.0 23 ARMSSC2 SECONDARY STRUCTURE . . 69.92 50.0 24 100.0 24 ARMSSC2 SURFACE . . . . . . . . 66.98 56.7 30 100.0 30 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 68.05 28.6 14 100.0 14 ARMSSC3 RELIABLE SIDE CHAINS . 61.40 33.3 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 70.53 23.1 13 100.0 13 ARMSSC3 SURFACE . . . . . . . . 68.05 28.6 14 100.0 14 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 65.39 28.6 7 100.0 7 ARMSSC4 RELIABLE SIDE CHAINS . 65.39 28.6 7 100.0 7 ARMSSC4 SECONDARY STRUCTURE . . 60.99 33.3 6 100.0 6 ARMSSC4 SURFACE . . . . . . . . 65.39 28.6 7 100.0 7 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 2.61 (Number of atoms: 39) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 2.61 39 100.0 39 CRMSCA CRN = ALL/NP . . . . . 0.0670 CRMSCA SECONDARY STRUCTURE . . 2.56 32 100.0 32 CRMSCA SURFACE . . . . . . . . 2.67 37 100.0 37 CRMSCA BURIED . . . . . . . . 1.04 2 100.0 2 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 2.69 194 100.0 194 CRMSMC SECONDARY STRUCTURE . . 2.56 160 100.0 160 CRMSMC SURFACE . . . . . . . . 2.75 184 100.0 184 CRMSMC BURIED . . . . . . . . 1.07 10 100.0 10 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 3.96 157 100.0 157 CRMSSC RELIABLE SIDE CHAINS . 3.92 139 100.0 139 CRMSSC SECONDARY STRUCTURE . . 3.91 130 100.0 130 CRMSSC SURFACE . . . . . . . . 3.98 155 100.0 155 CRMSSC BURIED . . . . . . . . 1.26 2 100.0 2 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 3.36 313 100.0 313 CRMSALL SECONDARY STRUCTURE . . 3.28 258 100.0 258 CRMSALL SURFACE . . . . . . . . 3.41 303 100.0 303 CRMSALL BURIED . . . . . . . . 1.07 10 100.0 10 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.273 1.000 0.500 39 100.0 39 ERRCA SECONDARY STRUCTURE . . 2.285 1.000 0.500 32 100.0 32 ERRCA SURFACE . . . . . . . . 2.340 1.000 0.500 37 100.0 37 ERRCA BURIED . . . . . . . . 1.037 1.000 0.500 2 100.0 2 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.315 1.000 0.500 194 100.0 194 ERRMC SECONDARY STRUCTURE . . 2.276 1.000 0.500 160 100.0 160 ERRMC SURFACE . . . . . . . . 2.385 1.000 0.500 184 100.0 184 ERRMC BURIED . . . . . . . . 1.037 1.000 0.500 10 100.0 10 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.424 1.000 0.500 157 100.0 157 ERRSC RELIABLE SIDE CHAINS . 3.400 1.000 0.500 139 100.0 139 ERRSC SECONDARY STRUCTURE . . 3.404 1.000 0.500 130 100.0 130 ERRSC SURFACE . . . . . . . . 3.452 1.000 0.500 155 100.0 155 ERRSC BURIED . . . . . . . . 1.258 1.000 0.500 2 100.0 2 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.841 1.000 0.500 313 100.0 313 ERRALL SECONDARY STRUCTURE . . 2.807 1.000 0.500 258 100.0 258 ERRALL SURFACE . . . . . . . . 2.900 1.000 0.500 303 100.0 303 ERRALL BURIED . . . . . . . . 1.037 1.000 0.500 10 100.0 10 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 5 21 32 37 39 39 39 DISTCA CA (P) 12.82 53.85 82.05 94.87 100.00 39 DISTCA CA (RMS) 0.75 1.47 1.92 2.30 2.61 DISTCA ALL (N) 30 132 204 271 313 313 313 DISTALL ALL (P) 9.58 42.17 65.18 86.58 100.00 313 DISTALL ALL (RMS) 0.75 1.46 1.89 2.53 3.36 DISTALL END of the results output