####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 39 ( 313), selected 39 , name T0586TS275_1-D2 # Molecule2: number of CA atoms 39 ( 313), selected 39 , name T0586-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0586TS275_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 39 85 - 123 2.46 2.46 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 38 85 - 122 1.79 2.53 LCS_AVERAGE: 95.13 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 24 85 - 108 0.92 6.38 LCS_AVERAGE: 56.28 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 39 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT D 85 D 85 24 38 39 12 20 24 34 36 37 37 37 38 38 38 38 38 38 38 38 39 39 39 39 LCS_GDT Q 86 Q 86 24 38 39 7 18 22 30 36 37 37 37 38 38 38 38 38 38 38 38 39 39 39 39 LCS_GDT L 87 L 87 24 38 39 8 17 24 28 35 37 37 37 38 38 38 38 38 38 38 38 39 39 39 39 LCS_GDT K 88 K 88 24 38 39 7 18 23 31 36 37 37 37 38 38 38 38 38 38 38 38 39 39 39 39 LCS_GDT K 89 K 89 24 38 39 16 20 22 34 36 37 37 37 38 38 38 38 38 38 38 38 39 39 39 39 LCS_GDT E 90 E 90 24 38 39 12 20 24 34 36 37 37 37 38 38 38 38 38 38 38 38 39 39 39 39 LCS_GDT L 91 L 91 24 38 39 16 20 24 34 36 37 37 37 38 38 38 38 38 38 38 38 39 39 39 39 LCS_GDT A 92 A 92 24 38 39 16 20 22 34 36 37 37 37 38 38 38 38 38 38 38 38 39 39 39 39 LCS_GDT D 93 D 93 24 38 39 16 20 22 34 36 37 37 37 38 38 38 38 38 38 38 38 39 39 39 39 LCS_GDT A 94 A 94 24 38 39 16 20 24 34 36 37 37 37 38 38 38 38 38 38 38 38 39 39 39 39 LCS_GDT I 95 I 95 24 38 39 16 20 24 34 36 37 37 37 38 38 38 38 38 38 38 38 39 39 39 39 LCS_GDT T 96 T 96 24 38 39 16 20 22 34 36 37 37 37 38 38 38 38 38 38 38 38 39 39 39 39 LCS_GDT E 97 E 97 24 38 39 16 20 24 34 36 37 37 37 38 38 38 38 38 38 38 38 39 39 39 39 LCS_GDT R 98 R 98 24 38 39 16 20 24 34 36 37 37 37 38 38 38 38 38 38 38 38 39 39 39 39 LCS_GDT F 99 F 99 24 38 39 16 20 22 34 36 37 37 37 38 38 38 38 38 38 38 38 39 39 39 39 LCS_GDT L 100 L 100 24 38 39 16 20 22 34 36 37 37 37 38 38 38 38 38 38 38 38 39 39 39 39 LCS_GDT E 101 E 101 24 38 39 16 20 24 34 36 37 37 37 38 38 38 38 38 38 38 38 39 39 39 39 LCS_GDT E 102 E 102 24 38 39 16 20 24 34 36 37 37 37 38 38 38 38 38 38 38 38 39 39 39 39 LCS_GDT A 103 A 103 24 38 39 16 20 24 34 36 37 37 37 38 38 38 38 38 38 38 38 39 39 39 39 LCS_GDT K 104 K 104 24 38 39 16 20 24 34 36 37 37 37 38 38 38 38 38 38 38 38 39 39 39 39 LCS_GDT S 105 S 105 24 38 39 16 20 22 34 36 37 37 37 38 38 38 38 38 38 38 38 39 39 39 39 LCS_GDT I 106 I 106 24 38 39 4 20 24 34 36 37 37 37 38 38 38 38 38 38 38 38 39 39 39 39 LCS_GDT G 107 G 107 24 38 39 11 20 24 34 36 37 37 37 38 38 38 38 38 38 38 38 39 39 39 39 LCS_GDT L 108 L 108 24 38 39 13 18 24 34 36 37 37 37 38 38 38 38 38 38 38 38 39 39 39 39 LCS_GDT D 109 D 109 22 38 39 13 17 24 34 36 37 37 37 38 38 38 38 38 38 38 38 39 39 39 39 LCS_GDT D 110 D 110 21 38 39 13 17 24 34 36 37 37 37 38 38 38 38 38 38 38 38 39 39 39 39 LCS_GDT Q 111 Q 111 21 38 39 13 17 24 34 36 37 37 37 38 38 38 38 38 38 38 38 39 39 39 39 LCS_GDT T 112 T 112 21 38 39 13 17 24 34 36 37 37 37 38 38 38 38 38 38 38 38 39 39 39 39 LCS_GDT A 113 A 113 21 38 39 13 17 24 34 36 37 37 37 38 38 38 38 38 38 38 38 39 39 39 39 LCS_GDT I 114 I 114 21 38 39 13 17 24 34 36 37 37 37 38 38 38 38 38 38 38 38 39 39 39 39 LCS_GDT E 115 E 115 21 38 39 13 17 24 34 36 37 37 37 38 38 38 38 38 38 38 38 39 39 39 39 LCS_GDT L 116 L 116 21 38 39 13 17 24 34 36 37 37 37 38 38 38 38 38 38 38 38 39 39 39 39 LCS_GDT L 117 L 117 21 38 39 13 17 24 34 36 37 37 37 38 38 38 38 38 38 38 38 39 39 39 39 LCS_GDT I 118 I 118 21 38 39 13 17 24 34 36 37 37 37 38 38 38 38 38 38 38 38 39 39 39 39 LCS_GDT K 119 K 119 21 38 39 13 17 24 34 36 37 37 37 38 38 38 38 38 38 38 38 39 39 39 39 LCS_GDT R 120 R 120 21 38 39 13 17 24 34 36 37 37 37 38 38 38 38 38 38 38 38 39 39 39 39 LCS_GDT S 121 S 121 21 38 39 8 16 24 34 36 37 37 37 38 38 38 38 38 38 38 38 39 39 39 39 LCS_GDT R 122 R 122 3 38 39 0 5 6 13 19 32 32 36 38 38 38 38 38 38 38 38 39 39 39 39 LCS_GDT N 123 N 123 3 3 39 0 3 4 4 4 4 5 5 9 9 12 13 17 29 37 37 39 39 39 39 LCS_AVERAGE LCS_A: 83.80 ( 56.28 95.13 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 16 20 24 34 36 37 37 37 38 38 38 38 38 38 38 38 39 39 39 39 GDT PERCENT_AT 41.03 51.28 61.54 87.18 92.31 94.87 94.87 94.87 97.44 97.44 97.44 97.44 97.44 97.44 97.44 97.44 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.30 0.51 0.87 1.40 1.49 1.56 1.56 1.56 1.79 1.79 1.79 1.79 1.79 1.79 1.79 1.79 2.46 2.46 2.46 2.46 GDT RMS_ALL_AT 6.78 6.55 2.71 2.60 2.60 2.59 2.59 2.59 2.53 2.53 2.53 2.53 2.53 2.53 2.53 2.53 2.46 2.46 2.46 2.46 # Checking swapping # possible swapping detected: D 85 D 85 # possible swapping detected: E 90 E 90 # possible swapping detected: F 99 F 99 # possible swapping detected: D 109 D 109 # possible swapping detected: E 115 E 115 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA D 85 D 85 1.448 0 0.053 0.297 3.583 81.548 66.786 LGA Q 86 Q 86 2.681 0 0.038 1.369 6.688 62.976 48.095 LGA L 87 L 87 2.931 0 0.040 0.170 6.185 62.857 43.631 LGA K 88 K 88 2.285 0 0.020 1.028 3.407 68.810 59.153 LGA K 89 K 89 2.395 0 0.063 1.120 6.295 70.952 48.413 LGA E 90 E 90 1.772 0 0.050 0.716 3.568 79.286 64.709 LGA L 91 L 91 1.393 0 0.046 1.015 2.757 83.690 74.286 LGA A 92 A 92 2.139 0 0.033 0.048 2.832 70.952 68.190 LGA D 93 D 93 1.969 0 0.049 0.085 3.816 75.000 62.679 LGA A 94 A 94 0.660 0 0.037 0.040 1.201 92.857 90.571 LGA I 95 I 95 1.685 0 0.027 1.197 5.666 77.262 62.798 LGA T 96 T 96 2.154 0 0.042 1.079 4.749 70.833 61.293 LGA E 97 E 97 1.317 0 0.023 0.351 4.309 85.952 68.730 LGA R 98 R 98 0.823 0 0.040 1.661 6.238 90.595 72.424 LGA F 99 F 99 1.974 0 0.031 0.256 6.277 75.000 47.576 LGA L 100 L 100 1.839 0 0.056 1.436 4.700 75.000 71.131 LGA E 101 E 101 1.083 0 0.035 0.949 2.577 85.952 79.788 LGA E 102 E 102 1.132 0 0.035 0.819 5.495 85.952 64.921 LGA A 103 A 103 1.133 0 0.023 0.042 1.806 88.214 85.143 LGA K 104 K 104 1.443 0 0.047 1.124 4.048 83.690 67.566 LGA S 105 S 105 1.823 0 0.094 0.698 4.568 72.976 64.683 LGA I 106 I 106 1.178 0 0.242 1.308 3.182 77.262 72.381 LGA G 107 G 107 0.518 0 0.155 0.155 0.567 92.857 92.857 LGA L 108 L 108 0.785 0 0.111 0.968 4.148 88.214 74.345 LGA D 109 D 109 1.440 0 0.038 1.218 4.619 81.429 68.988 LGA D 110 D 110 1.371 0 0.032 0.403 2.957 81.429 77.381 LGA Q 111 Q 111 1.411 0 0.041 1.060 4.853 81.429 62.222 LGA T 112 T 112 0.541 0 0.025 0.068 1.245 95.238 91.905 LGA A 113 A 113 0.613 0 0.029 0.042 1.081 90.595 90.571 LGA I 114 I 114 1.345 0 0.038 1.332 4.749 81.429 64.643 LGA E 115 E 115 0.587 0 0.047 0.851 2.882 90.476 80.000 LGA L 116 L 116 0.639 0 0.036 0.920 4.080 88.214 77.262 LGA L 117 L 117 1.036 0 0.025 1.116 3.588 83.690 76.726 LGA I 118 I 118 1.212 0 0.028 1.099 2.213 79.286 75.119 LGA K 119 K 119 1.365 0 0.047 0.820 3.513 77.143 68.042 LGA R 120 R 120 1.256 0 0.056 1.711 7.810 79.286 59.784 LGA S 121 S 121 1.737 0 0.578 1.006 3.957 65.357 61.587 LGA R 122 R 122 5.898 0 0.677 0.433 14.445 14.524 6.883 LGA N 123 N 123 11.698 0 0.412 1.076 15.356 0.357 0.179 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 39 156 156 100.00 313 313 100.00 39 SUMMARY(RMSD_GDC): 2.464 2.521 3.697 76.630 65.986 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 39 39 4.0 37 1.56 82.692 89.112 2.235 LGA_LOCAL RMSD: 1.556 Number of atoms: 37 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.588 Number of assigned atoms: 39 Std_ASGN_ATOMS RMSD: 2.464 Standard rmsd on all 39 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.320619 * X + -0.898359 * Y + 0.300258 * Z + 55.230808 Y_new = -0.099966 * X + -0.283130 * Y + -0.953857 * Z + 59.580639 Z_new = 0.941918 * X + -0.335840 * Y + 0.000972 * Z + 12.057363 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.839354 -1.228298 -1.567903 [DEG: -162.6830 -70.3763 -89.8342 ] ZXZ: 0.304964 1.569825 1.913294 [DEG: 17.4731 89.9443 109.6237 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0586TS275_1-D2 REMARK 2: T0586-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0586TS275_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 39 39 4.0 37 1.56 89.112 2.46 REMARK ---------------------------------------------------------- MOLECULE T0586TS275_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0586 REMARK MODEL 1 REMARK PARENT 3by6A ATOM 668 N ASP 85 1.556 21.049 14.998 1.00 5.89 N ATOM 669 CA ASP 85 2.304 19.901 15.426 1.00 5.89 C ATOM 670 CB ASP 85 3.321 20.256 16.529 1.00 5.89 C ATOM 671 CG ASP 85 4.374 21.200 15.964 1.00 5.89 C ATOM 672 OD1 ASP 85 4.934 20.893 14.879 1.00 5.89 O ATOM 673 OD2 ASP 85 4.630 22.251 16.614 1.00 5.89 O ATOM 674 C ASP 85 1.364 18.902 16.033 1.00 5.89 C ATOM 675 O ASP 85 1.454 17.707 15.759 1.00 5.89 O ATOM 676 N GLN 86 0.424 19.365 16.880 1.00 5.76 N ATOM 677 CA GLN 86 -0.467 18.455 17.546 1.00 5.76 C ATOM 678 CB GLN 86 -1.328 19.118 18.642 1.00 5.76 C ATOM 679 CG GLN 86 -2.323 20.173 18.159 1.00 5.76 C ATOM 680 CD GLN 86 -3.009 20.720 19.405 1.00 5.76 C ATOM 681 OE1 GLN 86 -4.133 21.216 19.359 1.00 5.76 O ATOM 682 NE2 GLN 86 -2.300 20.631 20.562 1.00 5.76 N ATOM 683 C GLN 86 -1.356 17.799 16.538 1.00 5.76 C ATOM 684 O GLN 86 -1.670 16.616 16.649 1.00 5.76 O ATOM 685 N LEU 87 -1.783 18.558 15.514 1.00 5.64 N ATOM 686 CA LEU 87 -2.641 18.018 14.504 1.00 5.64 C ATOM 687 CB LEU 87 -3.023 19.047 13.424 1.00 5.64 C ATOM 688 CG LEU 87 -3.898 18.455 12.300 1.00 5.64 C ATOM 689 CD1 LEU 87 -5.283 18.041 12.817 1.00 5.64 C ATOM 690 CD2 LEU 87 -3.959 19.391 11.081 1.00 5.64 C ATOM 691 C LEU 87 -1.912 16.917 13.801 1.00 5.64 C ATOM 692 O LEU 87 -2.508 15.893 13.471 1.00 5.64 O ATOM 693 N LYS 88 -0.603 17.102 13.537 1.00 6.31 N ATOM 694 CA LYS 88 0.138 16.097 12.826 1.00 6.31 C ATOM 695 CB LYS 88 1.567 16.526 12.422 1.00 6.31 C ATOM 696 CG LYS 88 2.609 16.588 13.542 1.00 6.31 C ATOM 697 CD LYS 88 3.114 15.222 14.017 1.00 6.31 C ATOM 698 CE LYS 88 4.196 15.303 15.096 1.00 6.31 C ATOM 699 NZ LYS 88 4.638 13.939 15.460 1.00 6.31 N ATOM 700 C LYS 88 0.213 14.856 13.656 1.00 6.31 C ATOM 701 O LYS 88 0.115 13.745 13.138 1.00 6.31 O ATOM 702 N LYS 89 0.374 15.013 14.982 1.00 6.71 N ATOM 703 CA LYS 89 0.459 13.867 15.838 1.00 6.71 C ATOM 704 CB LYS 89 0.653 14.212 17.326 1.00 6.71 C ATOM 705 CG LYS 89 0.865 12.970 18.197 1.00 6.71 C ATOM 706 CD LYS 89 1.318 13.269 19.628 1.00 6.71 C ATOM 707 CE LYS 89 0.159 13.577 20.580 1.00 6.71 C ATOM 708 NZ LYS 89 -0.715 12.389 20.708 1.00 6.71 N ATOM 709 C LYS 89 -0.832 13.123 15.715 1.00 6.71 C ATOM 710 O LYS 89 -0.864 11.897 15.812 1.00 6.71 O ATOM 711 N GLU 90 -1.940 13.860 15.503 1.00 6.20 N ATOM 712 CA GLU 90 -3.238 13.261 15.373 1.00 6.20 C ATOM 713 CB GLU 90 -4.351 14.277 15.073 1.00 6.20 C ATOM 714 CG GLU 90 -5.723 13.615 14.914 1.00 6.20 C ATOM 715 CD GLU 90 -6.700 14.648 14.372 1.00 6.20 C ATOM 716 OE1 GLU 90 -6.922 15.676 15.065 1.00 6.20 O ATOM 717 OE2 GLU 90 -7.231 14.427 13.250 1.00 6.20 O ATOM 718 C GLU 90 -3.199 12.335 14.203 1.00 6.20 C ATOM 719 O GLU 90 -3.783 11.254 14.237 1.00 6.20 O ATOM 720 N LEU 91 -2.506 12.747 13.129 1.00 6.27 N ATOM 721 CA LEU 91 -2.402 11.938 11.950 1.00 6.27 C ATOM 722 CB LEU 91 -1.569 12.650 10.858 1.00 6.27 C ATOM 723 CG LEU 91 -1.379 11.948 9.489 1.00 6.27 C ATOM 724 CD1 LEU 91 -0.554 12.846 8.550 1.00 6.27 C ATOM 725 CD2 LEU 91 -0.757 10.543 9.593 1.00 6.27 C ATOM 726 C LEU 91 -1.707 10.680 12.366 1.00 6.27 C ATOM 727 O LEU 91 -2.072 9.587 11.936 1.00 6.27 O ATOM 728 N ALA 92 -0.675 10.810 13.221 1.00 7.03 N ATOM 729 CA ALA 92 0.073 9.677 13.689 1.00 7.03 C ATOM 730 CB ALA 92 1.247 10.072 14.602 1.00 7.03 C ATOM 731 C ALA 92 -0.837 8.790 14.479 1.00 7.03 C ATOM 732 O ALA 92 -0.767 7.566 14.381 1.00 7.03 O ATOM 733 N ASP 93 -1.721 9.387 15.296 1.00 7.35 N ATOM 734 CA ASP 93 -2.629 8.606 16.081 1.00 7.35 C ATOM 735 CB ASP 93 -3.538 9.451 16.990 1.00 7.35 C ATOM 736 CG ASP 93 -2.709 9.974 18.155 1.00 7.35 C ATOM 737 OD1 ASP 93 -1.573 9.464 18.351 1.00 7.35 O ATOM 738 OD2 ASP 93 -3.207 10.885 18.870 1.00 7.35 O ATOM 739 C ASP 93 -3.513 7.857 15.142 1.00 7.35 C ATOM 740 O ASP 93 -3.904 6.725 15.419 1.00 7.35 O ATOM 741 N ALA 94 -3.857 8.479 14.001 1.00 7.19 N ATOM 742 CA ALA 94 -4.724 7.846 13.054 1.00 7.19 C ATOM 743 CB ALA 94 -5.020 8.736 11.833 1.00 7.19 C ATOM 744 C ALA 94 -4.074 6.591 12.554 1.00 7.19 C ATOM 745 O ALA 94 -4.734 5.563 12.417 1.00 7.19 O ATOM 746 N ILE 95 -2.759 6.628 12.263 1.00 7.73 N ATOM 747 CA ILE 95 -2.121 5.444 11.756 1.00 7.73 C ATOM 748 CB ILE 95 -0.700 5.645 11.283 1.00 7.73 C ATOM 749 CG2 ILE 95 0.222 5.849 12.494 1.00 7.73 C ATOM 750 CG1 ILE 95 -0.265 4.468 10.392 1.00 7.73 C ATOM 751 CD1 ILE 95 -0.968 4.436 9.034 1.00 7.73 C ATOM 752 C ILE 95 -2.123 4.391 12.821 1.00 7.73 C ATOM 753 O ILE 95 -2.371 3.217 12.550 1.00 7.73 O ATOM 754 N THR 96 -1.851 4.787 14.076 1.00 7.86 N ATOM 755 CA THR 96 -1.794 3.832 15.141 1.00 7.86 C ATOM 756 CB THR 96 -1.417 4.452 16.454 1.00 7.86 C ATOM 757 OG1 THR 96 -0.165 5.111 16.334 1.00 7.86 O ATOM 758 CG2 THR 96 -1.328 3.343 17.518 1.00 7.86 C ATOM 759 C THR 96 -3.153 3.217 15.283 1.00 7.86 C ATOM 760 O THR 96 -3.281 2.015 15.510 1.00 7.86 O ATOM 761 N GLU 97 -4.210 4.037 15.141 1.00 8.17 N ATOM 762 CA GLU 97 -5.567 3.587 15.284 1.00 8.17 C ATOM 763 CB GLU 97 -6.574 4.734 15.062 1.00 8.17 C ATOM 764 CG GLU 97 -8.047 4.323 15.149 1.00 8.17 C ATOM 765 CD GLU 97 -8.476 4.278 16.608 1.00 8.17 C ATOM 766 OE1 GLU 97 -8.432 5.346 17.274 1.00 8.17 O ATOM 767 OE2 GLU 97 -8.861 3.171 17.070 1.00 8.17 O ATOM 768 C GLU 97 -5.862 2.543 14.249 1.00 8.17 C ATOM 769 O GLU 97 -6.448 1.507 14.558 1.00 8.17 O ATOM 770 N ARG 98 -5.454 2.789 12.991 1.00 8.34 N ATOM 771 CA ARG 98 -5.784 1.888 11.924 1.00 8.34 C ATOM 772 CB ARG 98 -5.395 2.407 10.531 1.00 8.34 C ATOM 773 CG ARG 98 -3.901 2.648 10.348 1.00 8.34 C ATOM 774 CD ARG 98 -3.517 2.960 8.902 1.00 8.34 C ATOM 775 NE ARG 98 -4.355 4.103 8.455 1.00 8.34 N ATOM 776 CZ ARG 98 -5.567 3.849 7.886 1.00 8.34 C ATOM 777 NH1 ARG 98 -5.964 2.559 7.680 1.00 8.34 H ATOM 778 NH2 ARG 98 -6.391 4.879 7.536 1.00 8.34 H ATOM 779 C ARG 98 -5.107 0.571 12.108 1.00 8.34 C ATOM 780 O ARG 98 -5.709 -0.472 11.860 1.00 8.34 O ATOM 781 N PHE 99 -3.839 0.582 12.552 1.00 8.62 N ATOM 782 CA PHE 99 -3.088 -0.635 12.662 1.00 8.62 C ATOM 783 CB PHE 99 -1.645 -0.391 13.142 1.00 8.62 C ATOM 784 CG PHE 99 -0.831 -1.619 12.895 1.00 8.62 C ATOM 785 CD1 PHE 99 -0.726 -2.611 13.841 1.00 8.62 C ATOM 786 CD2 PHE 99 -0.166 -1.773 11.701 1.00 8.62 C ATOM 787 CE1 PHE 99 0.031 -3.734 13.598 1.00 8.62 C ATOM 788 CE2 PHE 99 0.593 -2.893 11.454 1.00 8.62 C ATOM 789 CZ PHE 99 0.695 -3.879 12.405 1.00 8.62 C ATOM 790 C PHE 99 -3.761 -1.513 13.667 1.00 8.62 C ATOM 791 O PHE 99 -3.945 -2.707 13.437 1.00 8.62 O ATOM 792 N LEU 100 -4.167 -0.934 14.811 1.00 8.73 N ATOM 793 CA LEU 100 -4.773 -1.721 15.844 1.00 8.73 C ATOM 794 CB LEU 100 -5.106 -0.926 17.118 1.00 8.73 C ATOM 795 CG LEU 100 -5.763 -1.793 18.212 1.00 8.73 C ATOM 796 CD1 LEU 100 -4.800 -2.891 18.694 1.00 8.73 C ATOM 797 CD2 LEU 100 -6.304 -0.940 19.369 1.00 8.73 C ATOM 798 C LEU 100 -6.058 -2.281 15.329 1.00 8.73 C ATOM 799 O LEU 100 -6.382 -3.441 15.579 1.00 8.73 O ATOM 800 N GLU 101 -6.818 -1.472 14.568 1.00 8.89 N ATOM 801 CA GLU 101 -8.094 -1.908 14.085 1.00 8.89 C ATOM 802 CB GLU 101 -8.799 -0.831 13.236 1.00 8.89 C ATOM 803 CG GLU 101 -10.236 -1.182 12.839 1.00 8.89 C ATOM 804 CD GLU 101 -10.853 0.034 12.156 1.00 8.89 C ATOM 805 OE1 GLU 101 -10.959 1.098 12.824 1.00 8.89 O ATOM 806 OE2 GLU 101 -11.230 -0.085 10.960 1.00 8.89 O ATOM 807 C GLU 101 -7.878 -3.112 13.228 1.00 8.89 C ATOM 808 O GLU 101 -8.643 -4.073 13.293 1.00 8.89 O ATOM 809 N GLU 102 -6.814 -3.087 12.405 1.00 9.00 N ATOM 810 CA GLU 102 -6.525 -4.173 11.515 1.00 9.00 C ATOM 811 CB GLU 102 -5.329 -3.878 10.594 1.00 9.00 C ATOM 812 CG GLU 102 -5.010 -5.022 9.631 1.00 9.00 C ATOM 813 CD GLU 102 -6.068 -5.028 8.536 1.00 9.00 C ATOM 814 OE1 GLU 102 -6.136 -4.025 7.775 1.00 9.00 O ATOM 815 OE2 GLU 102 -6.824 -6.032 8.448 1.00 9.00 O ATOM 816 C GLU 102 -6.182 -5.392 12.311 1.00 9.00 C ATOM 817 O GLU 102 -6.614 -6.495 11.980 1.00 9.00 O ATOM 818 N ALA 103 -5.388 -5.221 13.385 1.00 8.88 N ATOM 819 CA ALA 103 -4.951 -6.335 14.174 1.00 8.88 C ATOM 820 CB ALA 103 -4.019 -5.916 15.325 1.00 8.88 C ATOM 821 C ALA 103 -6.139 -7.002 14.792 1.00 8.88 C ATOM 822 O ALA 103 -6.254 -8.227 14.771 1.00 8.88 O ATOM 823 N LYS 104 -7.074 -6.211 15.344 1.00 9.20 N ATOM 824 CA LYS 104 -8.222 -6.794 15.973 1.00 9.20 C ATOM 825 CB LYS 104 -9.164 -5.737 16.592 1.00 9.20 C ATOM 826 CG LYS 104 -10.417 -6.283 17.295 1.00 9.20 C ATOM 827 CD LYS 104 -11.456 -6.914 16.361 1.00 9.20 C ATOM 828 CE LYS 104 -12.652 -7.535 17.082 1.00 9.20 C ATOM 829 NZ LYS 104 -13.583 -8.134 16.098 1.00 9.20 N ATOM 830 C LYS 104 -8.976 -7.541 14.923 1.00 9.20 C ATOM 831 O LYS 104 -9.466 -8.643 15.170 1.00 9.20 O ATOM 832 N SER 105 -9.080 -6.957 13.715 1.00 9.53 N ATOM 833 CA SER 105 -9.812 -7.574 12.648 1.00 9.53 C ATOM 834 CB SER 105 -9.842 -6.717 11.368 1.00 9.53 C ATOM 835 OG SER 105 -10.586 -5.527 11.591 1.00 9.53 O ATOM 836 C SER 105 -9.136 -8.863 12.319 1.00 9.53 C ATOM 837 O SER 105 -9.782 -9.838 11.940 1.00 9.53 O ATOM 838 N ILE 106 -7.804 -8.897 12.486 1.00 9.90 N ATOM 839 CA ILE 106 -7.025 -10.069 12.213 1.00 9.90 C ATOM 840 CB ILE 106 -5.555 -9.868 12.421 1.00 9.90 C ATOM 841 CG2 ILE 106 -4.862 -11.238 12.317 1.00 9.90 C ATOM 842 CG1 ILE 106 -5.023 -8.824 11.424 1.00 9.90 C ATOM 843 CD1 ILE 106 -3.608 -8.345 11.738 1.00 9.90 C ATOM 844 C ILE 106 -7.494 -11.141 13.141 1.00 9.90 C ATOM 845 O ILE 106 -7.498 -12.319 12.786 1.00 9.90 O ATOM 846 N GLY 107 -7.916 -10.756 14.360 1.00 9.93 N ATOM 847 CA GLY 107 -8.345 -11.744 15.303 1.00 9.93 C ATOM 848 C GLY 107 -7.523 -11.607 16.544 1.00 9.93 C ATOM 849 O GLY 107 -7.814 -12.254 17.549 1.00 9.93 O ATOM 850 N LEU 108 -6.464 -10.773 16.515 1.00 10.14 N ATOM 851 CA LEU 108 -5.712 -10.605 17.724 1.00 10.14 C ATOM 852 CB LEU 108 -4.350 -9.910 17.538 1.00 10.14 C ATOM 853 CG LEU 108 -3.311 -10.784 16.807 1.00 10.14 C ATOM 854 CD1 LEU 108 -2.944 -12.027 17.634 1.00 10.14 C ATOM 855 CD2 LEU 108 -3.767 -11.136 15.382 1.00 10.14 C ATOM 856 C LEU 108 -6.548 -9.818 18.682 1.00 10.14 C ATOM 857 O LEU 108 -7.155 -8.810 18.323 1.00 10.14 O ATOM 858 N ASP 109 -6.592 -10.283 19.947 1.00 10.77 N ATOM 859 CA ASP 109 -7.406 -9.679 20.962 1.00 10.77 C ATOM 860 CB ASP 109 -7.589 -10.574 22.201 1.00 10.77 C ATOM 861 CG ASP 109 -8.443 -11.775 21.813 1.00 10.77 C ATOM 862 OD1 ASP 109 -9.294 -11.632 20.895 1.00 10.77 O ATOM 863 OD2 ASP 109 -8.253 -12.854 22.435 1.00 10.77 O ATOM 864 C ASP 109 -6.764 -8.405 21.418 1.00 10.77 C ATOM 865 O ASP 109 -5.547 -8.242 21.354 1.00 10.77 O ATOM 866 N ASP 110 -7.602 -7.469 21.905 1.00 10.84 N ATOM 867 CA ASP 110 -7.170 -6.174 22.348 1.00 10.84 C ATOM 868 CB ASP 110 -8.346 -5.247 22.692 1.00 10.84 C ATOM 869 CG ASP 110 -9.053 -4.909 21.385 1.00 10.84 C ATOM 870 OD1 ASP 110 -8.342 -4.541 20.410 1.00 10.84 O ATOM 871 OD2 ASP 110 -10.308 -5.007 21.342 1.00 10.84 O ATOM 872 C ASP 110 -6.313 -6.307 23.564 1.00 10.84 C ATOM 873 O ASP 110 -5.326 -5.591 23.717 1.00 10.84 O ATOM 874 N GLN 111 -6.664 -7.241 24.464 1.00 11.25 N ATOM 875 CA GLN 111 -5.929 -7.398 25.684 1.00 11.25 C ATOM 876 CB GLN 111 -6.546 -8.472 26.599 1.00 11.25 C ATOM 877 CG GLN 111 -6.545 -9.881 26.000 1.00 11.25 C ATOM 878 CD GLN 111 -7.440 -10.756 26.867 1.00 11.25 C ATOM 879 OE1 GLN 111 -8.603 -10.977 26.531 1.00 11.25 O ATOM 880 NE2 GLN 111 -6.902 -11.255 28.011 1.00 11.25 N ATOM 881 C GLN 111 -4.527 -7.788 25.347 1.00 11.25 C ATOM 882 O GLN 111 -3.579 -7.322 25.977 1.00 11.25 O ATOM 883 N THR 112 -4.361 -8.669 24.345 1.00 10.81 N ATOM 884 CA THR 112 -3.055 -9.093 23.936 1.00 10.81 C ATOM 885 CB THR 112 -3.095 -10.190 22.912 1.00 10.81 C ATOM 886 OG1 THR 112 -3.766 -11.326 23.435 1.00 10.81 O ATOM 887 CG2 THR 112 -1.651 -10.559 22.532 1.00 10.81 C ATOM 888 C THR 112 -2.328 -7.941 23.320 1.00 10.81 C ATOM 889 O THR 112 -1.139 -7.746 23.565 1.00 10.81 O ATOM 890 N ALA 113 -3.032 -7.138 22.502 1.00 10.34 N ATOM 891 CA ALA 113 -2.388 -6.059 21.810 1.00 10.34 C ATOM 892 CB ALA 113 -3.355 -5.277 20.904 1.00 10.34 C ATOM 893 C ALA 113 -1.819 -5.098 22.805 1.00 10.34 C ATOM 894 O ALA 113 -0.702 -4.611 22.631 1.00 10.34 O ATOM 895 N ILE 114 -2.560 -4.802 23.888 1.00 10.76 N ATOM 896 CA ILE 114 -2.066 -3.826 24.811 1.00 10.76 C ATOM 897 CB ILE 114 -3.034 -3.495 25.911 1.00 10.76 C ATOM 898 CG2 ILE 114 -4.297 -2.914 25.254 1.00 10.76 C ATOM 899 CG1 ILE 114 -3.308 -4.718 26.797 1.00 10.76 C ATOM 900 CD1 ILE 114 -4.015 -4.365 28.106 1.00 10.76 C ATOM 901 C ILE 114 -0.800 -4.319 25.429 1.00 10.76 C ATOM 902 O ILE 114 0.181 -3.582 25.518 1.00 10.76 O ATOM 903 N GLU 115 -0.776 -5.590 25.862 1.00 10.57 N ATOM 904 CA GLU 115 0.404 -6.082 26.506 1.00 10.57 C ATOM 905 CB GLU 115 0.254 -7.526 27.018 1.00 10.57 C ATOM 906 CG GLU 115 -0.450 -7.644 28.370 1.00 10.57 C ATOM 907 CD GLU 115 0.631 -7.558 29.439 1.00 10.57 C ATOM 908 OE1 GLU 115 1.524 -8.446 29.433 1.00 10.57 O ATOM 909 OE2 GLU 115 0.586 -6.607 30.265 1.00 10.57 O ATOM 910 C GLU 115 1.550 -6.078 25.549 1.00 10.57 C ATOM 911 O GLU 115 2.644 -5.625 25.888 1.00 10.57 O ATOM 912 N LEU 116 1.327 -6.554 24.311 1.00 10.08 N ATOM 913 CA LEU 116 2.420 -6.685 23.393 1.00 10.08 C ATOM 914 CB LEU 116 2.011 -7.342 22.058 1.00 10.08 C ATOM 915 CG LEU 116 3.178 -7.612 21.079 1.00 10.08 C ATOM 916 CD1 LEU 116 3.734 -6.332 20.433 1.00 10.08 C ATOM 917 CD2 LEU 116 4.272 -8.451 21.763 1.00 10.08 C ATOM 918 C LEU 116 2.994 -5.341 23.097 1.00 10.08 C ATOM 919 O LEU 116 4.211 -5.169 23.106 1.00 10.08 O ATOM 920 N LEU 117 2.134 -4.341 22.837 1.00 9.93 N ATOM 921 CA LEU 117 2.638 -3.060 22.436 1.00 9.93 C ATOM 922 CB LEU 117 1.508 -2.071 22.068 1.00 9.93 C ATOM 923 CG LEU 117 1.926 -0.738 21.394 1.00 9.93 C ATOM 924 CD1 LEU 117 0.677 0.103 21.076 1.00 9.93 C ATOM 925 CD2 LEU 117 2.963 0.071 22.197 1.00 9.93 C ATOM 926 C LEU 117 3.435 -2.483 23.554 1.00 9.93 C ATOM 927 O LEU 117 4.520 -1.950 23.332 1.00 9.93 O ATOM 928 N ILE 118 2.932 -2.584 24.795 1.00 10.73 N ATOM 929 CA ILE 118 3.645 -1.945 25.860 1.00 10.73 C ATOM 930 CB ILE 118 2.946 -2.026 27.190 1.00 10.73 C ATOM 931 CG2 ILE 118 2.847 -3.501 27.615 1.00 10.73 C ATOM 932 CG1 ILE 118 3.657 -1.123 28.211 1.00 10.73 C ATOM 933 CD1 ILE 118 2.848 -0.892 29.489 1.00 10.73 C ATOM 934 C ILE 118 4.995 -2.565 25.994 1.00 10.73 C ATOM 935 O ILE 118 5.996 -1.866 26.154 1.00 10.73 O ATOM 936 N LYS 119 5.066 -3.904 25.913 1.00 11.62 N ATOM 937 CA LYS 119 6.324 -4.556 26.099 1.00 11.62 C ATOM 938 CB LYS 119 6.218 -6.083 25.967 1.00 11.62 C ATOM 939 CG LYS 119 5.339 -6.737 27.031 1.00 11.62 C ATOM 940 CD LYS 119 4.992 -8.190 26.709 1.00 11.62 C ATOM 941 CE LYS 119 6.220 -9.098 26.634 1.00 11.62 C ATOM 942 NZ LYS 119 5.803 -10.486 26.329 1.00 11.62 N ATOM 943 C LYS 119 7.278 -4.107 25.041 1.00 11.62 C ATOM 944 O LYS 119 8.397 -3.695 25.340 1.00 11.62 O ATOM 945 N ARG 120 6.844 -4.142 23.770 1.00 11.60 N ATOM 946 CA ARG 120 7.754 -3.846 22.704 1.00 11.60 C ATOM 947 CB ARG 120 7.104 -3.945 21.319 1.00 11.60 C ATOM 948 CG ARG 120 8.101 -3.790 20.172 1.00 11.60 C ATOM 949 CD ARG 120 7.532 -3.018 18.981 1.00 11.60 C ATOM 950 NE ARG 120 6.174 -3.562 18.694 1.00 11.60 N ATOM 951 CZ ARG 120 5.091 -3.041 19.342 1.00 11.60 C ATOM 952 NH1 ARG 120 5.260 -2.027 20.242 1.00 11.60 H ATOM 953 NH2 ARG 120 3.843 -3.529 19.085 1.00 11.60 H ATOM 954 C ARG 120 8.247 -2.441 22.808 1.00 11.60 C ATOM 955 O ARG 120 9.450 -2.186 22.781 1.00 11.60 O ATOM 956 N SER 121 7.316 -1.485 22.954 1.00 11.19 N ATOM 957 CA SER 121 7.701 -0.108 22.891 1.00 11.19 C ATOM 958 CB SER 121 6.732 0.749 22.061 1.00 11.19 C ATOM 959 OG SER 121 6.698 0.279 20.722 1.00 11.19 O ATOM 960 C SER 121 7.773 0.489 24.252 1.00 11.19 C ATOM 961 O SER 121 7.684 -0.191 25.271 1.00 11.19 O ATOM 962 N ARG 122 7.981 1.818 24.269 1.00 11.52 N ATOM 963 CA ARG 122 8.045 2.594 25.472 1.00 11.52 C ATOM 964 CB ARG 122 8.624 4.006 25.277 1.00 11.52 C ATOM 965 CG ARG 122 10.119 4.094 24.982 1.00 11.52 C ATOM 966 CD ARG 122 10.560 5.536 24.721 1.00 11.52 C ATOM 967 NE ARG 122 12.043 5.558 24.602 1.00 11.52 N ATOM 968 CZ ARG 122 12.675 6.717 24.259 1.00 11.52 C ATOM 969 NH1 ARG 122 11.944 7.840 23.990 1.00 11.52 H ATOM 970 NH2 ARG 122 14.038 6.756 24.191 1.00 11.52 H ATOM 971 C ARG 122 6.648 2.831 25.924 1.00 11.52 C ATOM 972 O ARG 122 5.719 2.856 25.119 1.00 11.52 O ATOM 973 N ASN 123 6.463 3.021 27.243 1.00 13.43 N ATOM 974 CA ASN 123 5.141 3.293 27.707 1.00 13.43 C ATOM 975 CB ASN 123 4.977 3.206 29.232 1.00 13.43 C ATOM 976 CG ASN 123 3.490 3.317 29.527 1.00 13.43 C ATOM 977 OD1 ASN 123 3.010 4.374 29.929 1.00 13.43 O ATOM 978 ND2 ASN 123 2.736 2.206 29.306 1.00 13.43 N ATOM 979 C ASN 123 4.816 4.683 27.275 1.00 13.43 C ATOM 980 O ASN 123 5.679 5.560 27.252 1.00 13.43 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 313 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 31.10 90.8 76 100.0 76 ARMSMC SECONDARY STRUCTURE . . 18.52 96.9 64 100.0 64 ARMSMC SURFACE . . . . . . . . 31.94 90.3 72 100.0 72 ARMSMC BURIED . . . . . . . . 3.33 100.0 4 100.0 4 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 91.95 38.2 34 100.0 34 ARMSSC1 RELIABLE SIDE CHAINS . 91.95 38.2 34 100.0 34 ARMSSC1 SECONDARY STRUCTURE . . 90.73 39.3 28 100.0 28 ARMSSC1 SURFACE . . . . . . . . 91.95 38.2 34 100.0 34 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 72.90 43.3 30 100.0 30 ARMSSC2 RELIABLE SIDE CHAINS . 65.44 47.8 23 100.0 23 ARMSSC2 SECONDARY STRUCTURE . . 74.59 45.8 24 100.0 24 ARMSSC2 SURFACE . . . . . . . . 72.90 43.3 30 100.0 30 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 85.61 42.9 14 100.0 14 ARMSSC3 RELIABLE SIDE CHAINS . 77.59 41.7 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 88.82 38.5 13 100.0 13 ARMSSC3 SURFACE . . . . . . . . 85.61 42.9 14 100.0 14 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 66.89 71.4 7 100.0 7 ARMSSC4 RELIABLE SIDE CHAINS . 66.89 71.4 7 100.0 7 ARMSSC4 SECONDARY STRUCTURE . . 72.22 66.7 6 100.0 6 ARMSSC4 SURFACE . . . . . . . . 66.89 71.4 7 100.0 7 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 2.46 (Number of atoms: 39) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 2.46 39 100.0 39 CRMSCA CRN = ALL/NP . . . . . 0.0632 CRMSCA SECONDARY STRUCTURE . . 1.76 32 100.0 32 CRMSCA SURFACE . . . . . . . . 2.52 37 100.0 37 CRMSCA BURIED . . . . . . . . 0.83 2 100.0 2 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 2.66 194 100.0 194 CRMSMC SECONDARY STRUCTURE . . 1.76 160 100.0 160 CRMSMC SURFACE . . . . . . . . 2.73 184 100.0 184 CRMSMC BURIED . . . . . . . . 0.84 10 100.0 10 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 4.64 157 100.0 157 CRMSSC RELIABLE SIDE CHAINS . 4.46 139 100.0 139 CRMSSC SECONDARY STRUCTURE . . 3.64 130 100.0 130 CRMSSC SURFACE . . . . . . . . 4.67 155 100.0 155 CRMSSC BURIED . . . . . . . . 1.31 2 100.0 2 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 3.74 313 100.0 313 CRMSALL SECONDARY STRUCTURE . . 2.81 258 100.0 258 CRMSALL SURFACE . . . . . . . . 3.80 303 100.0 303 CRMSALL BURIED . . . . . . . . 0.84 10 100.0 10 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 7.261 0.674 0.717 39 100.0 39 ERRCA SECONDARY STRUCTURE . . 7.293 0.690 0.733 32 100.0 32 ERRCA SURFACE . . . . . . . . 7.176 0.665 0.709 37 100.0 37 ERRCA BURIED . . . . . . . . 8.839 0.849 0.861 2 100.0 2 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 7.218 0.677 0.716 194 100.0 194 ERRMC SECONDARY STRUCTURE . . 7.327 0.698 0.740 160 100.0 160 ERRMC SURFACE . . . . . . . . 7.128 0.667 0.708 184 100.0 184 ERRMC BURIED . . . . . . . . 8.872 0.858 0.869 10 100.0 10 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 5.517 0.458 0.504 157 100.0 157 ERRSC RELIABLE SIDE CHAINS . 5.638 0.468 0.514 139 100.0 139 ERRSC SECONDARY STRUCTURE . . 5.713 0.483 0.535 130 100.0 130 ERRSC SURFACE . . . . . . . . 5.479 0.454 0.501 155 100.0 155 ERRSC BURIED . . . . . . . . 8.459 0.785 0.811 2 100.0 2 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 6.438 0.578 0.620 313 100.0 313 ERRALL SECONDARY STRUCTURE . . 6.587 0.601 0.647 258 100.0 258 ERRALL SURFACE . . . . . . . . 6.358 0.569 0.612 303 100.0 303 ERRALL BURIED . . . . . . . . 8.872 0.858 0.869 10 100.0 10 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 11 29 35 38 38 39 39 DISTCA CA (P) 28.21 74.36 89.74 97.44 97.44 39 DISTCA CA (RMS) 0.69 1.31 1.57 1.87 1.87 DISTCA ALL (N) 67 164 222 274 302 313 313 DISTALL ALL (P) 21.41 52.40 70.93 87.54 96.49 313 DISTALL ALL (RMS) 0.65 1.26 1.69 2.32 2.96 DISTALL END of the results output