####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 39 ( 313), selected 39 , name T0586TS250_1-D2 # Molecule2: number of CA atoms 39 ( 313), selected 39 , name T0586-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0586TS250_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 39 85 - 123 2.78 2.78 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 28 85 - 112 1.95 3.22 LCS_AVERAGE: 60.95 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 85 - 106 0.92 3.55 LCS_AVERAGE: 42.67 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 39 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT D 85 D 85 22 28 39 11 18 22 23 27 31 35 37 38 38 38 38 38 39 39 39 39 39 39 39 LCS_GDT Q 86 Q 86 22 28 39 11 18 22 23 27 31 35 37 38 38 38 38 38 39 39 39 39 39 39 39 LCS_GDT L 87 L 87 22 28 39 11 18 22 23 27 31 35 37 38 38 38 38 38 39 39 39 39 39 39 39 LCS_GDT K 88 K 88 22 28 39 11 18 22 23 27 31 35 37 38 38 38 38 38 39 39 39 39 39 39 39 LCS_GDT K 89 K 89 22 28 39 11 18 22 23 27 31 35 37 38 38 38 38 38 39 39 39 39 39 39 39 LCS_GDT E 90 E 90 22 28 39 11 18 22 23 27 31 35 37 38 38 38 38 38 39 39 39 39 39 39 39 LCS_GDT L 91 L 91 22 28 39 11 18 22 23 27 31 35 37 38 38 38 38 38 39 39 39 39 39 39 39 LCS_GDT A 92 A 92 22 28 39 11 18 22 23 27 31 35 37 38 38 38 38 38 39 39 39 39 39 39 39 LCS_GDT D 93 D 93 22 28 39 11 18 22 23 27 31 35 37 38 38 38 38 38 39 39 39 39 39 39 39 LCS_GDT A 94 A 94 22 28 39 11 18 22 23 27 31 35 37 38 38 38 38 38 39 39 39 39 39 39 39 LCS_GDT I 95 I 95 22 28 39 11 18 22 23 27 31 35 37 38 38 38 38 38 39 39 39 39 39 39 39 LCS_GDT T 96 T 96 22 28 39 10 18 22 23 27 31 35 37 38 38 38 38 38 39 39 39 39 39 39 39 LCS_GDT E 97 E 97 22 28 39 10 18 22 23 27 31 35 37 38 38 38 38 38 39 39 39 39 39 39 39 LCS_GDT R 98 R 98 22 28 39 10 18 22 23 27 31 35 37 38 38 38 38 38 39 39 39 39 39 39 39 LCS_GDT F 99 F 99 22 28 39 10 18 22 23 27 31 35 37 38 38 38 38 38 39 39 39 39 39 39 39 LCS_GDT L 100 L 100 22 28 39 9 18 22 23 27 31 35 37 38 38 38 38 38 39 39 39 39 39 39 39 LCS_GDT E 101 E 101 22 28 39 11 18 22 23 27 31 35 37 38 38 38 38 38 39 39 39 39 39 39 39 LCS_GDT E 102 E 102 22 28 39 6 15 22 23 27 31 35 37 38 38 38 38 38 39 39 39 39 39 39 39 LCS_GDT A 103 A 103 22 28 39 6 15 22 23 26 31 35 37 38 38 38 38 38 39 39 39 39 39 39 39 LCS_GDT K 104 K 104 22 28 39 10 18 22 23 25 31 35 37 38 38 38 38 38 39 39 39 39 39 39 39 LCS_GDT S 105 S 105 22 28 39 10 17 22 23 27 31 35 37 38 38 38 38 38 39 39 39 39 39 39 39 LCS_GDT I 106 I 106 22 28 39 4 15 22 23 27 31 35 37 38 38 38 38 38 39 39 39 39 39 39 39 LCS_GDT G 107 G 107 4 28 39 3 4 4 5 9 30 35 37 38 38 38 38 38 39 39 39 39 39 39 39 LCS_GDT L 108 L 108 4 28 39 3 12 20 23 27 31 35 37 38 38 38 38 38 39 39 39 39 39 39 39 LCS_GDT D 109 D 109 12 28 39 9 9 11 18 27 31 35 37 38 38 38 38 38 39 39 39 39 39 39 39 LCS_GDT D 110 D 110 12 28 39 9 9 11 13 13 28 35 37 38 38 38 38 38 39 39 39 39 39 39 39 LCS_GDT Q 111 Q 111 12 28 39 9 9 18 20 21 26 30 37 38 38 38 38 38 39 39 39 39 39 39 39 LCS_GDT T 112 T 112 12 28 39 9 9 11 13 13 15 28 37 38 38 38 38 38 39 39 39 39 39 39 39 LCS_GDT A 113 A 113 12 14 39 9 9 11 13 26 31 35 37 38 38 38 38 38 39 39 39 39 39 39 39 LCS_GDT I 114 I 114 12 14 39 9 9 11 13 21 29 35 37 38 38 38 38 38 39 39 39 39 39 39 39 LCS_GDT E 115 E 115 12 14 39 9 9 18 20 24 28 31 37 38 38 38 38 38 39 39 39 39 39 39 39 LCS_GDT L 116 L 116 12 14 39 9 9 11 13 17 24 35 37 38 38 38 38 38 39 39 39 39 39 39 39 LCS_GDT L 117 L 117 12 14 39 9 9 11 21 27 31 35 37 38 38 38 38 38 39 39 39 39 39 39 39 LCS_GDT I 118 I 118 12 14 39 4 6 11 13 27 31 35 37 38 38 38 38 38 39 39 39 39 39 39 39 LCS_GDT K 119 K 119 12 14 39 4 12 20 21 27 31 35 37 38 38 38 38 38 39 39 39 39 39 39 39 LCS_GDT R 120 R 120 12 14 39 4 6 14 21 27 31 35 37 38 38 38 38 38 39 39 39 39 39 39 39 LCS_GDT S 121 S 121 5 14 39 3 9 17 22 27 31 35 37 38 38 38 38 38 39 39 39 39 39 39 39 LCS_GDT R 122 R 122 5 14 39 3 7 17 21 26 31 35 37 38 38 38 38 38 39 39 39 39 39 39 39 LCS_GDT N 123 N 123 3 3 39 3 5 7 11 13 16 21 25 28 31 31 35 37 39 39 39 39 39 39 39 LCS_AVERAGE LCS_A: 67.87 ( 42.67 60.95 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 11 18 22 23 27 31 35 37 38 38 38 38 38 39 39 39 39 39 39 39 GDT PERCENT_AT 28.21 46.15 56.41 58.97 69.23 79.49 89.74 94.87 97.44 97.44 97.44 97.44 97.44 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.27 0.59 0.92 1.00 1.54 1.74 2.06 2.27 2.36 2.36 2.36 2.36 2.36 2.78 2.78 2.78 2.78 2.78 2.78 2.78 GDT RMS_ALL_AT 4.00 3.57 3.55 3.54 2.85 2.85 2.82 2.82 2.83 2.83 2.83 2.83 2.83 2.78 2.78 2.78 2.78 2.78 2.78 2.78 # Checking swapping # possible swapping detected: E 97 E 97 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA D 85 D 85 2.035 0 0.044 0.820 4.110 70.833 59.702 LGA Q 86 Q 86 1.887 0 0.041 1.327 7.397 77.143 52.275 LGA L 87 L 87 1.038 0 0.045 1.380 6.370 85.952 66.131 LGA K 88 K 88 0.955 0 0.044 0.804 9.008 85.952 54.603 LGA K 89 K 89 1.445 0 0.077 1.089 9.753 83.690 48.307 LGA E 90 E 90 0.765 0 0.039 1.308 6.602 95.238 67.354 LGA L 91 L 91 0.378 0 0.059 0.441 2.672 95.238 81.190 LGA A 92 A 92 0.912 0 0.015 0.327 2.816 90.476 83.810 LGA D 93 D 93 0.721 0 0.035 0.285 1.617 90.476 86.012 LGA A 94 A 94 0.620 0 0.022 0.094 0.814 90.476 90.476 LGA I 95 I 95 0.774 0 0.054 0.907 3.602 90.476 80.179 LGA T 96 T 96 1.041 0 0.040 0.182 1.367 83.690 85.374 LGA E 97 E 97 1.389 0 0.051 0.918 2.234 79.286 76.720 LGA R 98 R 98 0.933 0 0.044 1.443 7.136 88.214 63.723 LGA F 99 F 99 0.929 0 0.065 1.472 6.742 85.952 59.221 LGA L 100 L 100 1.907 0 0.062 1.293 2.980 75.000 71.071 LGA E 101 E 101 1.572 0 0.102 1.129 5.501 77.143 58.677 LGA E 102 E 102 1.227 0 0.099 0.659 2.509 83.690 81.852 LGA A 103 A 103 2.708 0 0.098 0.264 2.996 61.071 61.810 LGA K 104 K 104 2.835 0 0.085 1.149 4.386 60.952 61.058 LGA S 105 S 105 0.858 0 0.168 0.570 2.389 83.810 80.238 LGA I 106 I 106 1.303 0 0.311 1.486 5.410 79.286 66.488 LGA G 107 G 107 3.259 0 0.301 0.301 3.726 57.738 57.738 LGA L 108 L 108 2.403 0 0.107 0.789 4.697 70.833 55.655 LGA D 109 D 109 2.481 0 0.553 1.161 6.966 66.786 45.298 LGA D 110 D 110 3.472 0 0.047 1.089 8.679 55.476 33.690 LGA Q 111 Q 111 4.669 0 0.045 0.810 9.673 40.476 24.127 LGA T 112 T 112 4.369 0 0.044 0.650 6.840 43.452 34.218 LGA A 113 A 113 3.072 0 0.041 0.044 4.439 59.167 54.762 LGA I 114 I 114 3.321 0 0.054 0.368 6.553 57.500 39.167 LGA E 115 E 115 4.533 0 0.027 0.886 6.544 40.476 29.048 LGA L 116 L 116 3.877 0 0.169 0.477 6.118 45.119 35.179 LGA L 117 L 117 2.661 0 0.152 0.865 4.632 68.929 54.643 LGA I 118 I 118 2.448 0 0.165 0.477 3.210 66.905 61.131 LGA K 119 K 119 1.904 0 0.173 1.316 4.348 70.833 68.254 LGA R 120 R 120 2.246 0 0.080 1.239 5.138 64.881 58.831 LGA S 121 S 121 2.084 0 0.179 0.219 3.432 61.190 65.079 LGA R 122 R 122 3.169 0 0.058 1.055 10.899 36.548 24.069 LGA N 123 N 123 9.898 0 0.066 0.964 11.061 2.619 1.310 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 39 156 156 100.00 313 313 100.00 39 SUMMARY(RMSD_GDC): 2.783 2.663 3.908 69.820 58.422 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 39 39 4.0 37 2.27 75.000 75.212 1.560 LGA_LOCAL RMSD: 2.271 Number of atoms: 37 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.822 Number of assigned atoms: 39 Std_ASGN_ATOMS RMSD: 2.783 Standard rmsd on all 39 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.030193 * X + -0.995125 * Y + 0.093888 * Z + 64.296013 Y_new = -0.176471 * X + -0.097763 * Y + -0.979439 * Z + 41.194359 Z_new = 0.983843 * X + 0.013003 * Y + -0.178562 * Z + -4.961642 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.401345 -1.390791 3.068899 [DEG: -80.2912 -79.6865 175.8349 ] ZXZ: 0.095567 1.750321 1.557580 [DEG: 5.4756 100.2860 89.2428 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0586TS250_1-D2 REMARK 2: T0586-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0586TS250_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 39 39 4.0 37 2.27 75.212 2.78 REMARK ---------------------------------------------------------- MOLECULE T0586TS250_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0586 REMARK MODEL 1 REFINED REMARK PARENT N/A ATOM 1330 N ASP 85 3.137 19.377 16.460 1.00 1.79 N ATOM 1331 CA ASP 85 2.756 18.407 17.410 1.00 1.68 C ATOM 1332 C ASP 85 1.269 17.979 17.330 1.00 1.10 C ATOM 1333 O ASP 85 1.021 16.761 17.418 1.00 1.36 O ATOM 1334 CB ASP 85 3.370 18.637 18.814 1.00 1.90 C ATOM 1335 CG ASP 85 4.922 18.531 18.750 1.00 2.48 C ATOM 1340 OD1 ASP 85 5.582 19.287 17.989 1.00 2.94 O ATOM 1341 OD2 ASP 85 5.523 17.673 19.447 1.00 2.94 O ATOM 1342 N GLN 86 0.340 18.859 17.088 1.00 0.33 N ATOM 1343 CA GLN 86 -1.035 18.452 16.876 1.00 0.44 C ATOM 1344 C GLN 86 -1.236 17.662 15.567 1.00 0.54 C ATOM 1345 O GLN 86 -1.992 16.683 15.606 1.00 0.53 O ATOM 1346 CB GLN 86 -2.008 19.594 17.286 1.00 0.75 C ATOM 1347 CG GLN 86 -1.702 20.128 18.744 1.00 0.87 C ATOM 1354 CD GLN 86 -1.450 19.059 19.844 1.00 2.94 C ATOM 1355 OE1 GLN 86 -2.346 18.739 20.589 1.00 2.94 O ATOM 1356 NE2 GLN 86 -0.194 18.488 20.014 1.00 2.94 N ATOM 1359 N LEU 87 -0.530 17.939 14.511 1.00 1.25 N ATOM 1360 CA LEU 87 -0.570 17.134 13.310 1.00 1.80 C ATOM 1361 C LEU 87 0.112 15.750 13.452 1.00 1.71 C ATOM 1362 O LEU 87 -0.473 14.761 12.972 1.00 1.72 O ATOM 1363 CB LEU 87 -0.844 18.070 12.085 1.00 1.74 C ATOM 1368 CG LEU 87 -2.392 18.430 11.905 1.00 2.94 C ATOM 1369 CD1 LEU 87 -2.621 19.560 10.860 1.00 2.94 C ATOM 1370 CD2 LEU 87 -3.132 18.875 13.223 1.00 2.94 C ATOM 1378 N LYS 88 1.129 15.623 14.264 1.00 1.75 N ATOM 1379 CA LYS 88 1.652 14.329 14.647 1.00 2.18 C ATOM 1380 C LYS 88 0.669 13.501 15.552 1.00 1.89 C ATOM 1381 O LYS 88 0.518 12.288 15.313 1.00 2.23 O ATOM 1382 CB LYS 88 3.120 13.890 14.221 1.00 2.43 C ATOM 1383 CG LYS 88 3.251 13.655 12.615 1.00 1.23 C ATOM 1390 CD LYS 88 3.149 12.172 12.113 1.00 2.94 C ATOM 1393 CE LYS 88 3.007 12.095 10.546 1.00 2.94 C ATOM 1396 NZ LYS 88 4.237 12.592 9.776 1.00 2.94 N ATOM 1400 N LYS 89 -0.113 14.116 16.388 1.00 1.46 N ATOM 1401 CA LYS 89 -0.895 13.444 17.109 1.00 1.48 C ATOM 1402 C LYS 89 -2.186 12.998 16.308 1.00 1.17 C ATOM 1403 O LYS 89 -2.641 11.845 16.462 1.00 1.38 O ATOM 1404 CB LYS 89 -0.412 13.621 18.599 1.00 1.25 C ATOM 1405 CG LYS 89 1.132 13.172 18.815 1.00 1.52 C ATOM 1406 CD LYS 89 2.356 14.193 18.715 1.00 1.11 C ATOM 1415 CE LYS 89 3.122 14.304 17.343 1.00 2.94 C ATOM 1418 NZ LYS 89 4.520 14.934 17.448 1.00 2.94 N ATOM 1422 N GLU 90 -2.584 13.728 15.306 1.00 0.51 N ATOM 1423 CA GLU 90 -3.611 13.287 14.356 1.00 0.60 C ATOM 1424 C GLU 90 -3.091 12.125 13.405 1.00 0.41 C ATOM 1425 O GLU 90 -3.827 11.147 13.149 1.00 0.55 O ATOM 1426 CB GLU 90 -4.473 14.473 13.848 1.00 0.92 C ATOM 1427 CG GLU 90 -5.024 15.351 15.040 1.00 1.26 C ATOM 1434 CD GLU 90 -5.555 14.594 16.284 1.00 2.94 C ATOM 1435 OE1 GLU 90 -4.746 14.106 17.118 1.00 2.94 O ATOM 1436 OE2 GLU 90 -6.792 14.507 16.496 1.00 2.94 O ATOM 1437 N LEU 91 -1.853 12.135 13.027 1.00 0.92 N ATOM 1438 CA LEU 91 -1.252 11.041 12.259 1.00 1.49 C ATOM 1439 C LEU 91 -0.989 9.733 13.160 1.00 1.59 C ATOM 1440 O LEU 91 -1.216 8.576 12.730 1.00 1.80 O ATOM 1441 CB LEU 91 -0.494 11.661 11.033 1.00 1.18 C ATOM 1442 CG LEU 91 -1.461 12.279 9.904 1.00 1.15 C ATOM 1443 CD1 LEU 91 -0.782 13.432 9.087 1.00 1.66 C ATOM 1448 CD2 LEU 91 -2.857 12.850 10.367 1.00 2.94 C ATOM 1456 N ALA 92 -0.771 9.933 14.421 1.00 2.67 N ATOM 1457 CA ALA 92 -0.713 8.886 15.415 1.00 2.02 C ATOM 1458 C ALA 92 -2.122 8.259 15.611 1.00 1.62 C ATOM 1459 O ALA 92 -2.263 7.032 15.725 1.00 1.85 O ATOM 1460 CB ALA 92 0.700 8.297 15.440 1.00 3.85 C ATOM 1466 N ASP 93 -3.163 9.060 15.614 1.00 1.26 N ATOM 1467 CA ASP 93 -4.550 8.555 15.630 1.00 1.62 C ATOM 1468 C ASP 93 -4.903 7.736 14.309 1.00 1.31 C ATOM 1469 O ASP 93 -5.571 6.683 14.390 1.00 1.79 O ATOM 1470 CB ASP 93 -5.683 9.433 16.157 1.00 2.02 C ATOM 1475 CG ASP 93 -5.281 9.940 17.565 1.00 2.94 C ATOM 1476 OD1 ASP 93 -5.043 9.117 18.487 1.00 2.94 O ATOM 1477 OD2 ASP 93 -5.189 11.175 17.790 1.00 2.94 O ATOM 1478 N ALA 94 -4.420 8.122 13.167 1.00 0.85 N ATOM 1479 CA ALA 94 -4.545 7.312 11.958 1.00 1.33 C ATOM 1480 C ALA 94 -3.752 5.970 12.060 1.00 1.04 C ATOM 1481 O ALA 94 -4.250 4.917 11.606 1.00 1.34 O ATOM 1482 CB ALA 94 -4.256 7.868 10.560 1.00 1.99 C ATOM 1488 N ILE 95 -2.592 5.961 12.643 1.00 0.91 N ATOM 1489 CA ILE 95 -1.860 4.731 12.880 1.00 1.60 C ATOM 1490 C ILE 95 -2.560 3.788 13.983 1.00 1.44 C ATOM 1491 O ILE 95 -2.657 2.540 13.823 1.00 1.58 O ATOM 1492 CB ILE 95 -0.305 4.687 12.408 1.00 1.95 C ATOM 1496 CG1 ILE 95 0.574 5.911 12.860 1.00 2.94 C ATOM 1499 CG2 ILE 95 -0.272 4.500 10.825 1.00 2.94 C ATOM 1503 CD1 ILE 95 1.182 6.716 11.781 1.00 2.94 C ATOM 1507 N THR 96 -3.293 4.414 14.975 1.00 1.43 N ATOM 1508 CA THR 96 -4.195 3.701 15.914 1.00 2.22 C ATOM 1509 C THR 96 -5.487 3.139 15.171 1.00 2.06 C ATOM 1510 O THR 96 -5.932 2.002 15.448 1.00 2.53 O ATOM 1511 CB THR 96 -4.377 4.244 17.384 1.00 2.75 C ATOM 1515 OG1 THR 96 -4.949 5.632 17.388 1.00 2.94 O ATOM 1517 CG2 THR 96 -2.951 4.260 18.059 1.00 2.94 C ATOM 1521 N GLU 97 -6.000 3.819 14.200 1.00 1.69 N ATOM 1522 CA GLU 97 -7.067 3.306 13.362 1.00 2.22 C ATOM 1523 C GLU 97 -6.581 2.117 12.426 1.00 1.76 C ATOM 1524 O GLU 97 -7.304 1.106 12.297 1.00 2.13 O ATOM 1525 CB GLU 97 -8.061 4.351 13.028 1.00 2.45 C ATOM 1526 CG GLU 97 -8.609 4.979 14.377 1.00 2.63 C ATOM 1527 CD GLU 97 -9.383 6.295 14.221 1.00 2.58 C ATOM 1528 OE1 GLU 97 -10.554 6.383 14.674 1.00 3.24 O ATOM 1529 OE2 GLU 97 -8.827 7.307 13.720 1.00 1.80 O ATOM 1536 N ARG 98 -5.364 2.114 11.971 1.00 1.12 N ATOM 1537 CA ARG 98 -4.765 0.955 11.303 1.00 1.49 C ATOM 1538 C ARG 98 -4.504 -0.267 12.264 1.00 1.00 C ATOM 1539 O ARG 98 -4.783 -1.433 11.896 1.00 1.24 O ATOM 1540 CB ARG 98 -3.857 1.286 10.079 1.00 2.18 C ATOM 1541 CG ARG 98 -4.663 1.852 8.821 1.00 1.25 C ATOM 1542 CD ARG 98 -4.637 3.399 8.574 1.00 1.23 C ATOM 1551 NE ARG 98 -4.792 3.723 7.201 1.00 2.94 N ATOM 1553 CZ ARG 98 -5.981 3.607 6.471 1.00 2.94 C ATOM 1554 NH1 ARG 98 -7.158 3.516 7.044 1.00 2.94 H ATOM 1555 NH2 ARG 98 -5.919 3.606 5.163 1.00 2.94 H ATOM 1560 N PHE 99 -4.166 -0.012 13.485 1.00 1.28 N ATOM 1561 CA PHE 99 -4.053 -1.028 14.505 1.00 2.31 C ATOM 1562 C PHE 99 -5.486 -1.592 14.925 1.00 2.35 C ATOM 1563 O PHE 99 -5.666 -2.819 15.099 1.00 2.70 O ATOM 1564 CB PHE 99 -2.806 -0.731 15.439 1.00 2.83 C ATOM 1569 CG PHE 99 -1.593 -0.700 14.445 1.00 2.94 C ATOM 1570 CD1 PHE 99 -1.304 -1.800 13.595 1.00 2.94 C ATOM 1571 CD2 PHE 99 -0.839 0.474 14.247 1.00 2.94 C ATOM 1572 CE1 PHE 99 -0.457 -1.664 12.486 1.00 2.94 C ATOM 1573 CE2 PHE 99 0.039 0.593 13.155 1.00 2.94 C ATOM 1574 CZ PHE 99 0.195 -0.457 12.251 1.00 2.94 C ATOM 1580 N LEU 100 -6.504 -0.790 14.878 1.00 2.42 N ATOM 1581 CA LEU 100 -7.915 -1.209 15.060 1.00 3.37 C ATOM 1582 C LEU 100 -8.456 -2.052 13.866 1.00 2.92 C ATOM 1583 O LEU 100 -9.087 -3.113 14.068 1.00 3.31 O ATOM 1584 CB LEU 100 -8.532 -0.508 16.283 1.00 3.73 C ATOM 1589 CG LEU 100 -7.424 -0.355 17.451 1.00 2.94 C ATOM 1590 CD1 LEU 100 -6.743 -1.685 17.979 1.00 2.94 C ATOM 1591 CD2 LEU 100 -7.899 0.494 18.666 1.00 2.94 C ATOM 1599 N GLU 101 -8.005 -1.739 12.697 1.00 2.12 N ATOM 1600 CA GLU 101 -8.350 -2.508 11.519 1.00 2.42 C ATOM 1601 C GLU 101 -7.439 -3.970 11.395 1.00 1.55 C ATOM 1602 O GLU 101 -7.987 -5.028 11.018 1.00 1.93 O ATOM 1603 CB GLU 101 -8.382 -1.709 9.959 1.00 3.42 C ATOM 1604 CG GLU 101 -9.510 -0.621 10.129 1.00 4.21 C ATOM 1611 CD GLU 101 -9.335 0.581 9.182 1.00 2.94 C ATOM 1612 OE1 GLU 101 -9.156 1.733 9.657 1.00 2.94 O ATOM 1613 OE2 GLU 101 -9.387 0.418 7.935 1.00 2.94 O ATOM 1614 N GLU 102 -6.343 -3.990 12.116 1.00 0.59 N ATOM 1615 CA GLU 102 -5.673 -5.262 12.652 1.00 1.80 C ATOM 1616 C GLU 102 -6.506 -6.017 13.546 1.00 1.89 C ATOM 1617 O GLU 102 -6.606 -7.215 13.266 1.00 2.31 O ATOM 1618 CB GLU 102 -4.099 -5.077 12.648 1.00 2.72 C ATOM 1619 CG GLU 102 -3.621 -4.765 11.168 1.00 2.46 C ATOM 1620 CD GLU 102 -2.171 -4.278 11.020 1.00 2.83 C ATOM 1621 OE1 GLU 102 -1.934 -3.167 10.474 1.00 1.97 O ATOM 1622 OE2 GLU 102 -1.216 -5.004 11.401 1.00 4.00 O ATOM 1629 N ALA 103 -7.231 -5.389 14.398 1.00 2.68 N ATOM 1630 CA ALA 103 -8.141 -6.041 15.177 1.00 4.01 C ATOM 1631 C ALA 103 -9.428 -6.635 14.579 1.00 3.95 C ATOM 1632 O ALA 103 -9.765 -7.787 14.914 1.00 4.37 O ATOM 1633 CB ALA 103 -7.523 -5.811 16.636 1.00 4.41 C ATOM 1639 N LYS 104 -9.942 -5.983 13.587 1.00 3.76 N ATOM 1640 CA LYS 104 -11.016 -6.442 12.758 1.00 4.52 C ATOM 1641 C LYS 104 -10.599 -7.621 11.916 1.00 3.53 C ATOM 1642 O LYS 104 -11.350 -8.600 11.970 1.00 3.99 O ATOM 1643 CB LYS 104 -11.956 -5.190 12.753 1.00 5.02 C ATOM 1644 CG LYS 104 -12.528 -4.795 14.201 1.00 4.45 C ATOM 1651 CD LYS 104 -11.601 -3.992 15.203 1.00 2.94 C ATOM 1654 CE LYS 104 -11.904 -4.230 16.718 1.00 2.94 C ATOM 1657 NZ LYS 104 -11.043 -3.291 17.583 1.00 2.94 N ATOM 1661 N SER 105 -9.383 -7.669 11.456 1.00 2.01 N ATOM 1662 CA SER 105 -8.835 -8.854 10.894 1.00 1.54 C ATOM 1663 C SER 105 -8.649 -10.085 11.845 1.00 0.37 C ATOM 1664 O SER 105 -9.126 -11.240 11.661 1.00 0.70 O ATOM 1665 CB SER 105 -7.751 -8.331 9.934 1.00 2.32 C ATOM 1670 OG SER 105 -7.337 -9.403 8.962 1.00 2.94 O ATOM 1672 N ILE 106 -7.958 -9.840 12.848 1.00 1.27 N ATOM 1673 CA ILE 106 -7.397 -10.969 13.508 1.00 2.33 C ATOM 1674 C ILE 106 -7.262 -10.979 14.927 1.00 2.70 C ATOM 1675 O ILE 106 -7.676 -11.898 15.662 1.00 4.02 O ATOM 1676 CB ILE 106 -5.933 -11.228 12.894 1.00 2.22 C ATOM 1680 CG1 ILE 106 -5.671 -10.981 11.354 1.00 2.94 C ATOM 1683 CG2 ILE 106 -5.401 -12.657 13.261 1.00 2.94 C ATOM 1687 CD1 ILE 106 -6.201 -12.041 10.339 1.00 2.94 C ATOM 1691 N GLY 107 -6.478 -10.058 15.150 1.00 2.12 N ATOM 1692 CA GLY 107 -5.808 -9.859 16.262 1.00 3.23 C ATOM 1693 C GLY 107 -6.471 -9.335 17.385 1.00 3.41 C ATOM 1694 O GLY 107 -5.425 -9.199 17.878 1.00 4.17 O ATOM 1698 N LEU 108 -7.640 -9.051 17.974 1.00 3.38 N ATOM 1699 CA LEU 108 -7.753 -9.095 19.461 1.00 4.16 C ATOM 1700 C LEU 108 -7.351 -7.572 20.019 1.00 3.81 C ATOM 1701 O LEU 108 -6.464 -6.902 19.764 1.00 3.16 O ATOM 1702 CB LEU 108 -6.592 -9.663 20.094 1.00 4.25 C ATOM 1703 CG LEU 108 -6.264 -11.229 19.909 1.00 5.41 C ATOM 1704 CD1 LEU 108 -7.314 -12.079 19.128 1.00 6.51 C ATOM 1705 CD2 LEU 108 -4.822 -11.582 19.363 1.00 5.25 C ATOM 1717 N ASP 109 -8.213 -7.223 21.003 1.00 4.68 N ATOM 1718 CA ASP 109 -7.871 -5.950 21.700 1.00 4.83 C ATOM 1719 C ASP 109 -6.810 -6.015 22.744 1.00 3.69 C ATOM 1720 O ASP 109 -5.804 -5.277 22.659 1.00 4.19 O ATOM 1721 CB ASP 109 -9.227 -5.420 22.278 1.00 6.57 C ATOM 1722 CG ASP 109 -10.254 -5.115 21.159 1.00 7.89 C ATOM 1727 OD1 ASP 109 -10.686 -6.040 20.418 1.00 2.94 O ATOM 1728 OD2 ASP 109 -10.668 -3.938 20.991 1.00 2.94 O ATOM 1729 N ASP 110 -7.040 -6.883 23.658 1.00 2.58 N ATOM 1730 CA ASP 110 -6.124 -7.160 24.629 1.00 2.54 C ATOM 1731 C ASP 110 -4.803 -7.670 24.043 1.00 1.28 C ATOM 1732 O ASP 110 -3.747 -7.196 24.508 1.00 1.70 O ATOM 1735 CB ASP 110 -6.748 -8.197 25.605 1.00 2.94 C ATOM 1738 CG ASP 110 -7.580 -7.561 26.746 1.00 2.94 C ATOM 1739 OD1 ASP 110 -8.128 -8.301 27.605 1.00 2.94 O ATOM 1740 OD2 ASP 110 -7.696 -6.311 26.838 1.00 2.94 O ATOM 1741 N GLN 111 -4.830 -8.524 23.049 1.00 1.61 N ATOM 1742 CA GLN 111 -3.670 -9.101 22.556 1.00 3.28 C ATOM 1743 C GLN 111 -2.831 -8.119 21.727 1.00 3.44 C ATOM 1744 O GLN 111 -1.622 -8.068 21.995 1.00 3.98 O ATOM 1745 CB GLN 111 -3.787 -10.674 22.595 1.00 4.32 C ATOM 1746 CG GLN 111 -4.790 -11.116 23.746 1.00 3.62 C ATOM 1747 CD GLN 111 -4.958 -12.621 24.018 1.00 4.41 C ATOM 1754 OE1 GLN 111 -4.299 -13.443 23.426 1.00 2.94 O ATOM 1755 NE2 GLN 111 -5.892 -13.019 24.962 1.00 2.94 N ATOM 1758 N THR 112 -3.421 -7.224 20.979 1.00 3.51 N ATOM 1759 CA THR 112 -2.705 -6.204 20.324 1.00 4.55 C ATOM 1760 C THR 112 -2.054 -5.173 21.232 1.00 3.55 C ATOM 1761 O THR 112 -0.882 -4.854 20.984 1.00 3.81 O ATOM 1762 CB THR 112 -2.021 -6.685 19.024 1.00 5.30 C ATOM 1766 OG1 THR 112 -3.009 -7.427 18.159 1.00 2.94 O ATOM 1768 CG2 THR 112 -0.781 -7.596 19.250 1.00 2.94 C ATOM 1772 N ALA 113 -2.736 -4.686 22.249 1.00 2.99 N ATOM 1773 CA ALA 113 -2.117 -3.802 23.253 1.00 3.17 C ATOM 1774 C ALA 113 -0.982 -4.458 23.937 1.00 1.79 C ATOM 1775 O ALA 113 0.055 -3.795 24.039 1.00 1.98 O ATOM 1776 CB ALA 113 -3.257 -3.473 24.254 1.00 4.32 C ATOM 1782 N ILE 114 -1.121 -5.688 24.324 1.00 1.19 N ATOM 1783 CA ILE 114 -0.097 -6.348 24.958 1.00 2.23 C ATOM 1784 C ILE 114 1.169 -6.598 24.085 1.00 2.32 C ATOM 1785 O ILE 114 2.294 -6.255 24.534 1.00 2.67 O ATOM 1786 CB ILE 114 -0.770 -7.208 26.104 1.00 2.97 C ATOM 1790 CG1 ILE 114 -1.473 -6.226 27.170 1.00 2.94 C ATOM 1793 CG2 ILE 114 0.261 -8.104 26.854 1.00 2.94 C ATOM 1797 CD1 ILE 114 -2.993 -6.452 27.444 1.00 2.94 C ATOM 1801 N GLU 115 0.979 -7.116 22.881 1.00 2.81 N ATOM 1802 CA GLU 115 2.042 -7.429 21.968 1.00 3.88 C ATOM 1803 C GLU 115 2.761 -6.152 21.467 1.00 3.37 C ATOM 1804 O GLU 115 3.998 -6.220 21.380 1.00 3.83 O ATOM 1805 CB GLU 115 2.006 -8.935 21.505 1.00 4.48 C ATOM 1806 CG GLU 115 2.063 -9.911 22.765 1.00 4.83 C ATOM 1807 CD GLU 115 1.086 -11.101 22.738 1.00 5.01 C ATOM 1814 OE1 GLU 115 -0.156 -10.904 22.662 1.00 2.94 O ATOM 1815 OE2 GLU 115 1.525 -12.273 22.868 1.00 2.94 O ATOM 1816 N LEU 116 2.113 -5.000 21.394 1.00 2.81 N ATOM 1817 CA LEU 116 2.787 -3.772 21.080 1.00 3.11 C ATOM 1818 C LEU 116 3.259 -2.864 22.194 1.00 2.28 C ATOM 1819 O LEU 116 4.056 -1.950 21.914 1.00 2.96 O ATOM 1820 CB LEU 116 2.389 -3.372 19.616 1.00 3.84 C ATOM 1821 CG LEU 116 2.421 -4.641 18.634 1.00 4.47 C ATOM 1822 CD1 LEU 116 1.896 -4.312 17.205 1.00 5.27 C ATOM 1827 CD2 LEU 116 3.807 -5.401 18.501 1.00 2.94 C ATOM 1835 N LEU 117 2.945 -3.187 23.405 1.00 1.44 N ATOM 1836 CA LEU 117 3.514 -2.510 24.492 1.00 2.04 C ATOM 1837 C LEU 117 4.695 -3.267 24.997 1.00 1.76 C ATOM 1838 O LEU 117 5.842 -2.801 24.759 1.00 1.95 O ATOM 1839 CB LEU 117 2.294 -1.971 25.323 1.00 2.83 C ATOM 1840 CG LEU 117 1.509 -0.755 24.628 1.00 1.55 C ATOM 1845 CD1 LEU 117 1.398 -0.676 23.062 1.00 2.94 C ATOM 1846 CD2 LEU 117 0.052 -0.597 25.183 1.00 2.94 C ATOM 1854 N ILE 118 4.497 -4.391 25.589 1.00 1.86 N ATOM 1855 CA ILE 118 5.419 -4.715 26.593 1.00 2.25 C ATOM 1856 C ILE 118 6.723 -5.269 26.091 1.00 2.22 C ATOM 1857 O ILE 118 7.667 -5.370 26.892 1.00 2.95 O ATOM 1858 CB ILE 118 4.634 -5.148 27.918 1.00 1.94 C ATOM 1862 CG1 ILE 118 3.524 -4.064 28.312 1.00 2.94 C ATOM 1865 CG2 ILE 118 5.556 -5.258 29.183 1.00 2.94 C ATOM 1869 CD1 ILE 118 2.082 -4.379 27.819 1.00 2.94 C ATOM 1873 N LYS 119 6.815 -5.414 24.799 1.00 1.49 N ATOM 1874 CA LYS 119 7.935 -5.964 24.185 1.00 1.48 C ATOM 1875 C LYS 119 8.733 -4.890 23.434 1.00 1.43 C ATOM 1876 O LYS 119 9.867 -5.181 23.020 1.00 2.11 O ATOM 1877 CB LYS 119 7.515 -7.413 23.744 1.00 1.29 C ATOM 1878 CG LYS 119 6.660 -8.259 24.800 1.00 0.79 C ATOM 1885 CD LYS 119 7.368 -9.014 26.003 1.00 2.94 C ATOM 1888 CE LYS 119 7.548 -8.199 27.326 1.00 2.94 C ATOM 1891 NZ LYS 119 7.750 -9.069 28.576 1.00 2.94 N ATOM 1895 N ARG 120 8.212 -3.694 23.329 1.00 1.26 N ATOM 1896 CA ARG 120 8.708 -2.697 22.464 1.00 1.25 C ATOM 1897 C ARG 120 9.166 -1.534 23.370 1.00 1.38 C ATOM 1898 O ARG 120 10.324 -1.102 23.207 1.00 1.79 O ATOM 1899 CB ARG 120 7.615 -2.510 21.347 1.00 1.21 C ATOM 1904 CG ARG 120 7.579 -3.658 20.235 1.00 2.94 C ATOM 1907 CD ARG 120 7.614 -5.148 20.739 1.00 2.94 C ATOM 1910 NE ARG 120 7.296 -6.162 19.803 1.00 2.94 N ATOM 1912 CZ ARG 120 7.566 -7.516 20.098 1.00 2.94 C ATOM 1913 NH1 ARG 120 8.493 -7.890 20.956 1.00 2.94 H ATOM 1914 NH2 ARG 120 6.878 -8.462 19.513 1.00 2.94 H ATOM 1919 N SER 121 8.385 -1.101 24.330 1.00 1.19 N ATOM 1920 CA SER 121 8.535 0.244 24.766 1.00 0.95 C ATOM 1921 C SER 121 9.292 0.590 26.051 1.00 0.85 C ATOM 1922 O SER 121 9.448 1.802 26.285 1.00 0.68 O ATOM 1923 CB SER 121 7.114 0.884 24.652 1.00 0.92 C ATOM 1928 OG SER 121 7.206 2.381 24.526 1.00 2.94 O ATOM 1930 CA ARG 122 9.899 -0.091 28.233 1.00 1.70 C ATOM 1931 N ARG 122 9.686 -0.361 26.856 1.00 2.94 N ATOM 1934 C ARG 122 8.543 0.485 28.832 1.00 2.94 C ATOM 1935 O ARG 122 8.583 0.911 30.002 1.00 2.94 O ATOM 1936 CB ARG 122 11.199 0.761 28.472 1.00 2.94 C ATOM 1939 CG ARG 122 12.518 -0.080 28.366 1.00 2.94 C ATOM 1942 CD ARG 122 12.858 -0.627 26.939 1.00 2.94 C ATOM 1945 NE ARG 122 14.088 -1.314 27.011 1.00 2.94 N ATOM 1947 CZ ARG 122 14.719 -1.901 25.915 1.00 2.94 C ATOM 1948 NH1 ARG 122 15.850 -2.534 26.107 1.00 2.94 H ATOM 1949 NH2 ARG 122 14.220 -1.837 24.703 1.00 2.94 H ATOM 1954 CA ASN 123 6.367 1.438 28.370 1.00 2.94 C ATOM 1955 N ASN 123 7.405 0.486 28.123 1.00 2.94 N ATOM 1958 C ASN 123 5.032 1.212 27.575 1.00 2.94 C ATOM 1959 O ASN 123 4.379 0.175 27.797 1.00 2.94 O ATOM 1960 CB ASN 123 6.869 2.920 28.055 1.00 2.94 C ATOM 1963 CG ASN 123 8.012 3.585 28.853 1.00 2.94 C ATOM 1964 OD1 ASN 123 9.152 3.205 28.734 1.00 2.94 O ATOM 1965 ND2 ASN 123 7.748 4.696 29.636 1.00 2.94 N TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 313 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 42.75 78.9 76 100.0 76 ARMSMC SECONDARY STRUCTURE . . 17.73 85.9 64 100.0 64 ARMSMC SURFACE . . . . . . . . 43.87 77.8 72 100.0 72 ARMSMC BURIED . . . . . . . . 9.09 100.0 4 100.0 4 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 85.25 38.2 34 100.0 34 ARMSSC1 RELIABLE SIDE CHAINS . 85.25 38.2 34 100.0 34 ARMSSC1 SECONDARY STRUCTURE . . 86.63 35.7 28 100.0 28 ARMSSC1 SURFACE . . . . . . . . 85.25 38.2 34 100.0 34 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 84.07 23.3 30 100.0 30 ARMSSC2 RELIABLE SIDE CHAINS . 83.02 17.4 23 100.0 23 ARMSSC2 SECONDARY STRUCTURE . . 79.85 25.0 24 100.0 24 ARMSSC2 SURFACE . . . . . . . . 84.07 23.3 30 100.0 30 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 73.28 35.7 14 100.0 14 ARMSSC3 RELIABLE SIDE CHAINS . 62.37 41.7 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 76.04 30.8 13 100.0 13 ARMSSC3 SURFACE . . . . . . . . 73.28 35.7 14 100.0 14 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 97.18 42.9 7 100.0 7 ARMSSC4 RELIABLE SIDE CHAINS . 97.18 42.9 7 100.0 7 ARMSSC4 SECONDARY STRUCTURE . . 104.96 33.3 6 100.0 6 ARMSSC4 SURFACE . . . . . . . . 97.18 42.9 7 100.0 7 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 2.78 (Number of atoms: 39) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 2.78 39 100.0 39 CRMSCA CRN = ALL/NP . . . . . 0.0714 CRMSCA SECONDARY STRUCTURE . . 2.39 32 100.0 32 CRMSCA SURFACE . . . . . . . . 2.77 37 100.0 37 CRMSCA BURIED . . . . . . . . 2.96 2 100.0 2 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 2.85 194 100.0 194 CRMSMC SECONDARY STRUCTURE . . 2.39 160 100.0 160 CRMSMC SURFACE . . . . . . . . 2.85 184 100.0 184 CRMSMC BURIED . . . . . . . . 2.86 10 100.0 10 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 4.92 157 100.0 157 CRMSSC RELIABLE SIDE CHAINS . 4.78 139 100.0 139 CRMSSC SECONDARY STRUCTURE . . 4.44 130 100.0 130 CRMSSC SURFACE . . . . . . . . 4.94 155 100.0 155 CRMSSC BURIED . . . . . . . . 3.56 2 100.0 2 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 3.96 313 100.0 313 CRMSALL SECONDARY STRUCTURE . . 3.51 258 100.0 258 CRMSALL SURFACE . . . . . . . . 3.99 303 100.0 303 CRMSALL BURIED . . . . . . . . 2.86 10 100.0 10 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.034 0.245 0.230 39 100.0 39 ERRCA SECONDARY STRUCTURE . . 0.891 0.251 0.247 32 100.0 32 ERRCA SURFACE . . . . . . . . 1.056 0.253 0.239 37 100.0 37 ERRCA BURIED . . . . . . . . 0.626 0.092 0.063 2 100.0 2 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.055 0.239 0.209 194 100.0 194 ERRMC SECONDARY STRUCTURE . . 0.859 0.235 0.213 160 100.0 160 ERRMC SURFACE . . . . . . . . 1.073 0.245 0.215 184 100.0 184 ERRMC BURIED . . . . . . . . 0.719 0.115 0.092 10 100.0 10 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.137 0.285 0.204 157 100.0 157 ERRSC RELIABLE SIDE CHAINS . 2.097 0.290 0.214 139 100.0 139 ERRSC SECONDARY STRUCTURE . . 1.884 0.280 0.212 130 100.0 130 ERRSC SURFACE . . . . . . . . 2.151 0.286 0.204 155 100.0 155 ERRSC BURIED . . . . . . . . 1.052 0.153 0.182 2 100.0 2 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.554 0.259 0.203 313 100.0 313 ERRALL SECONDARY STRUCTURE . . 1.327 0.254 0.208 258 100.0 258 ERRALL SURFACE . . . . . . . . 1.581 0.264 0.207 303 100.0 303 ERRALL BURIED . . . . . . . . 0.719 0.115 0.092 10 100.0 10 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 8 20 31 38 39 39 39 DISTCA CA (P) 20.51 51.28 79.49 97.44 100.00 39 DISTCA CA (RMS) 0.78 1.23 1.85 2.41 2.78 DISTCA ALL (N) 44 128 187 252 306 313 313 DISTALL ALL (P) 14.06 40.89 59.74 80.51 97.76 313 DISTALL ALL (RMS) 0.76 1.32 1.78 2.51 3.66 DISTALL END of the results output