####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 39 ( 313), selected 39 , name T0586TS228_1-D2 # Molecule2: number of CA atoms 39 ( 313), selected 39 , name T0586-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0586TS228_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 36 85 - 120 4.82 5.41 LONGEST_CONTINUOUS_SEGMENT: 36 87 - 122 4.94 5.21 LCS_AVERAGE: 92.11 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 85 - 105 1.67 17.65 LCS_AVERAGE: 45.36 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 85 - 104 0.69 17.46 LCS_AVERAGE: 40.70 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 39 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT D 85 D 85 20 21 36 13 19 19 19 20 22 22 24 25 28 31 32 33 35 37 38 39 39 39 39 LCS_GDT Q 86 Q 86 20 21 36 12 19 19 19 20 22 22 24 25 28 31 32 33 35 37 38 39 39 39 39 LCS_GDT L 87 L 87 20 21 36 17 19 19 19 20 22 22 24 25 28 31 32 33 35 37 38 39 39 39 39 LCS_GDT K 88 K 88 20 21 36 17 19 19 19 20 22 22 24 25 28 31 32 33 35 37 38 39 39 39 39 LCS_GDT K 89 K 89 20 21 36 17 19 19 19 20 22 22 24 25 28 31 32 33 35 37 38 39 39 39 39 LCS_GDT E 90 E 90 20 21 36 17 19 19 19 20 22 22 24 25 28 31 32 33 35 37 38 39 39 39 39 LCS_GDT L 91 L 91 20 21 36 17 19 19 19 20 22 22 24 25 28 31 32 33 35 37 38 39 39 39 39 LCS_GDT A 92 A 92 20 21 36 17 19 19 19 20 22 22 24 25 28 31 32 33 35 37 38 39 39 39 39 LCS_GDT D 93 D 93 20 21 36 17 19 19 19 20 22 22 24 25 28 31 32 33 35 37 38 39 39 39 39 LCS_GDT A 94 A 94 20 21 36 17 19 19 19 20 22 22 24 25 28 31 32 33 35 37 38 39 39 39 39 LCS_GDT I 95 I 95 20 21 36 17 19 19 19 20 22 22 24 25 28 31 32 33 35 37 38 39 39 39 39 LCS_GDT T 96 T 96 20 21 36 17 19 19 19 20 22 22 24 25 28 31 32 33 35 37 38 39 39 39 39 LCS_GDT E 97 E 97 20 21 36 17 19 19 19 20 22 22 24 25 28 31 32 33 35 37 38 39 39 39 39 LCS_GDT R 98 R 98 20 21 36 17 19 19 19 20 22 22 24 25 28 31 32 33 35 37 38 39 39 39 39 LCS_GDT F 99 F 99 20 21 36 17 19 19 19 20 22 22 24 25 28 31 32 33 35 37 38 39 39 39 39 LCS_GDT L 100 L 100 20 21 36 17 19 19 19 20 22 22 24 25 28 31 32 33 35 37 38 39 39 39 39 LCS_GDT E 101 E 101 20 21 36 17 19 19 19 20 22 22 24 25 28 31 32 33 35 37 38 39 39 39 39 LCS_GDT E 102 E 102 20 21 36 17 19 19 19 20 22 22 24 25 28 31 31 32 34 36 36 39 39 39 39 LCS_GDT A 103 A 103 20 21 36 17 19 19 19 20 22 22 24 25 28 31 31 33 35 37 38 39 39 39 39 LCS_GDT K 104 K 104 20 21 36 1 3 3 14 20 20 22 24 25 28 31 32 33 35 37 38 39 39 39 39 LCS_GDT S 105 S 105 3 21 36 3 3 5 6 11 12 17 21 25 28 31 32 33 35 37 38 39 39 39 39 LCS_GDT I 106 I 106 5 8 36 4 5 5 5 6 10 11 15 24 28 31 32 33 35 37 38 39 39 39 39 LCS_GDT G 107 G 107 5 8 36 4 5 5 6 11 13 18 23 25 28 31 32 33 35 37 38 39 39 39 39 LCS_GDT L 108 L 108 5 8 36 4 5 8 14 19 22 22 24 25 28 31 32 33 35 37 38 39 39 39 39 LCS_GDT D 109 D 109 5 15 36 4 5 8 14 19 22 22 24 25 28 31 32 33 35 37 38 39 39 39 39 LCS_GDT D 110 D 110 14 15 36 9 14 14 15 15 22 22 24 25 28 31 32 33 35 37 38 39 39 39 39 LCS_GDT Q 111 Q 111 14 15 36 12 14 14 15 15 18 21 24 25 28 31 32 33 35 36 38 39 39 39 39 LCS_GDT T 112 T 112 14 15 36 12 14 14 15 15 16 16 20 25 28 31 32 33 35 37 38 39 39 39 39 LCS_GDT A 113 A 113 14 15 36 12 14 14 15 15 16 16 18 23 28 31 32 33 35 37 38 39 39 39 39 LCS_GDT I 114 I 114 14 15 36 12 14 14 15 15 16 16 18 23 28 31 32 33 35 37 38 39 39 39 39 LCS_GDT E 115 E 115 14 15 36 12 14 14 15 15 16 16 21 23 28 31 32 33 35 37 38 39 39 39 39 LCS_GDT L 116 L 116 14 15 36 12 14 14 15 15 16 16 18 23 26 29 32 33 35 37 38 39 39 39 39 LCS_GDT L 117 L 117 14 15 36 12 14 14 15 15 16 16 18 22 26 29 31 33 35 37 38 39 39 39 39 LCS_GDT I 118 I 118 14 15 36 12 14 14 15 15 16 16 18 23 26 29 32 33 35 37 38 39 39 39 39 LCS_GDT K 119 K 119 14 15 36 12 14 14 15 15 16 16 18 23 26 29 32 33 35 37 38 39 39 39 39 LCS_GDT R 120 R 120 14 15 36 12 14 14 15 15 16 16 17 19 20 24 26 30 34 37 38 39 39 39 39 LCS_GDT S 121 S 121 14 15 36 12 14 14 15 15 16 16 16 19 20 22 24 29 32 37 38 39 39 39 39 LCS_GDT R 122 R 122 14 15 36 9 14 14 15 15 16 16 18 22 26 28 31 33 35 37 38 39 39 39 39 LCS_GDT N 123 N 123 14 15 33 12 14 14 15 15 16 16 17 19 20 24 26 30 32 37 38 39 39 39 39 LCS_AVERAGE LCS_A: 59.39 ( 40.70 45.36 92.11 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 17 19 19 19 20 22 22 24 25 28 31 32 33 35 37 38 39 39 39 39 GDT PERCENT_AT 43.59 48.72 48.72 48.72 51.28 56.41 56.41 61.54 64.10 71.79 79.49 82.05 84.62 89.74 94.87 97.44 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.32 0.38 0.38 0.38 0.69 1.79 1.79 2.26 2.54 3.12 3.76 4.24 4.31 4.58 4.92 5.02 5.15 5.15 5.15 5.15 GDT RMS_ALL_AT 17.13 17.19 17.19 17.19 17.46 13.64 13.64 12.19 12.06 10.56 7.92 5.83 5.88 5.36 5.16 5.16 5.15 5.15 5.15 5.15 # Checking swapping # possible swapping detected: D 85 D 85 # possible swapping detected: E 97 E 97 # possible swapping detected: E 102 E 102 # possible swapping detected: E 115 E 115 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA D 85 D 85 1.901 0 0.014 0.277 4.828 77.143 60.476 LGA Q 86 Q 86 1.709 0 0.073 1.223 8.422 75.238 51.164 LGA L 87 L 87 2.534 0 0.043 1.404 8.263 66.905 43.750 LGA K 88 K 88 2.004 0 0.024 0.161 7.853 75.119 50.159 LGA K 89 K 89 1.715 0 0.010 0.862 4.696 77.262 57.249 LGA E 90 E 90 2.269 0 0.000 0.272 5.326 68.810 50.847 LGA L 91 L 91 1.831 0 0.030 0.147 3.944 79.286 63.869 LGA A 92 A 92 1.766 0 0.009 0.011 2.603 77.262 73.238 LGA D 93 D 93 2.166 0 0.031 0.145 4.804 70.833 54.881 LGA A 94 A 94 1.544 0 0.035 0.032 2.521 79.286 74.857 LGA I 95 I 95 1.832 0 0.029 0.130 4.050 75.000 60.952 LGA T 96 T 96 2.053 0 0.038 1.069 4.664 70.833 61.293 LGA E 97 E 97 1.310 0 0.024 0.626 3.549 85.952 71.005 LGA R 98 R 98 1.147 0 0.018 1.695 11.054 83.690 47.229 LGA F 99 F 99 2.261 0 0.022 0.167 6.091 68.810 45.065 LGA L 100 L 100 2.036 0 0.009 0.136 3.379 72.976 63.333 LGA E 101 E 101 0.726 0 0.022 0.689 2.846 92.857 81.905 LGA E 102 E 102 1.594 0 0.067 0.580 5.237 77.262 54.709 LGA A 103 A 103 2.624 0 0.580 0.570 3.659 66.905 62.190 LGA K 104 K 104 4.265 0 0.639 1.211 6.138 30.952 27.778 LGA S 105 S 105 7.376 0 0.720 0.618 9.268 14.524 10.159 LGA I 106 I 106 6.729 0 0.291 1.333 10.639 16.310 9.821 LGA G 107 G 107 6.654 0 0.014 0.014 6.721 22.381 22.381 LGA L 108 L 108 2.020 0 0.116 0.165 5.956 49.167 44.464 LGA D 109 D 109 1.991 0 0.037 1.198 2.511 72.857 68.869 LGA D 110 D 110 2.654 0 0.306 1.190 5.878 45.119 42.262 LGA Q 111 Q 111 4.549 0 0.048 1.060 7.908 26.429 44.392 LGA T 112 T 112 8.411 0 0.033 1.023 11.548 5.595 4.218 LGA A 113 A 113 10.362 0 0.029 0.031 13.495 0.357 0.571 LGA I 114 I 114 12.221 0 0.023 0.145 15.302 0.000 0.000 LGA E 115 E 115 13.680 0 0.008 1.128 17.213 0.000 0.000 LGA L 116 L 116 17.121 0 0.000 0.224 20.379 0.000 0.000 LGA L 117 L 117 19.200 0 0.045 0.094 22.520 0.000 0.000 LGA I 118 I 118 20.784 0 0.010 0.062 23.768 0.000 0.000 LGA K 119 K 119 22.693 0 0.012 1.145 26.329 0.000 0.000 LGA R 120 R 120 26.333 0 0.013 1.429 29.591 0.000 0.000 LGA S 121 S 121 28.186 0 0.049 0.757 31.102 0.000 0.000 LGA R 122 R 122 29.498 0 0.182 0.977 32.723 0.000 0.000 LGA N 123 N 123 32.357 0 0.351 0.499 34.736 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 39 156 156 100.00 313 313 100.00 39 SUMMARY(RMSD_GDC): 5.152 4.868 7.059 44.234 35.977 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 39 39 4.0 24 2.26 64.103 59.171 1.018 LGA_LOCAL RMSD: 2.258 Number of atoms: 24 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 12.189 Number of assigned atoms: 39 Std_ASGN_ATOMS RMSD: 5.152 Standard rmsd on all 39 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.273262 * X + 0.762958 * Y + -0.585852 * Z + 70.727676 Y_new = -0.940402 * X + -0.340039 * Y + -0.004198 * Z + 19.145834 Z_new = -0.202416 * X + 0.549789 * Y + 0.810407 * Z + 24.798311 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.853588 0.203824 0.596089 [DEG: -106.2028 11.6783 34.1534 ] ZXZ: -1.563630 0.625949 -0.352769 [DEG: -89.5894 35.8643 -20.2122 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0586TS228_1-D2 REMARK 2: T0586-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0586TS228_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 39 39 4.0 24 2.26 59.171 5.15 REMARK ---------------------------------------------------------- MOLECULE T0586TS228_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0586 REMARK MODEL 1 REMARK PARENT 2hs5_A ATOM 649 N ASP 85 1.962 21.005 14.070 1.00 0.00 N ATOM 650 CA ASP 85 2.406 19.940 14.972 1.00 0.00 C ATOM 651 C ASP 85 1.232 19.359 15.758 1.00 0.00 C ATOM 652 O ASP 85 1.190 18.148 16.009 1.00 0.00 O ATOM 653 CB ASP 85 3.453 20.443 15.969 1.00 0.00 C ATOM 654 CG ASP 85 4.831 20.530 15.359 1.00 0.00 C ATOM 655 OD1 ASP 85 5.221 19.569 14.667 1.00 0.00 O ATOM 656 OD2 ASP 85 5.546 21.538 15.543 1.00 0.00 O ATOM 657 N GLN 86 0.254 20.188 16.117 1.00 0.00 N ATOM 658 CA GLN 86 -0.919 19.694 16.844 1.00 0.00 C ATOM 659 C GLN 86 -1.702 18.718 15.956 1.00 0.00 C ATOM 660 O GLN 86 -2.086 17.627 16.367 1.00 0.00 O ATOM 661 CB GLN 86 -1.868 20.851 17.216 1.00 0.00 C ATOM 662 CG GLN 86 -1.336 21.918 18.161 1.00 0.00 C ATOM 663 CD GLN 86 -1.042 21.424 19.556 1.00 0.00 C ATOM 664 OE1 GLN 86 -1.662 20.484 20.049 1.00 0.00 O ATOM 665 NE2 GLN 86 -0.134 22.079 20.230 1.00 0.00 N ATOM 666 N LEU 87 -1.915 19.097 14.703 1.00 0.00 N ATOM 667 CA LEU 87 -2.672 18.257 13.779 1.00 0.00 C ATOM 668 C LEU 87 -1.899 16.995 13.419 1.00 0.00 C ATOM 669 O LEU 87 -2.480 15.921 13.288 1.00 0.00 O ATOM 670 CB LEU 87 -2.987 19.044 12.504 1.00 0.00 C ATOM 671 CG LEU 87 -3.998 20.196 12.677 1.00 0.00 C ATOM 672 CD1 LEU 87 -4.003 21.078 11.437 1.00 0.00 C ATOM 673 CD2 LEU 87 -5.412 19.706 12.941 1.00 0.00 C ATOM 674 N LYS 88 -0.582 17.097 13.310 1.00 0.00 N ATOM 675 CA LYS 88 0.260 15.934 13.034 1.00 0.00 C ATOM 676 C LYS 88 0.230 14.925 14.189 1.00 0.00 C ATOM 677 O LYS 88 0.204 13.720 13.960 1.00 0.00 O ATOM 678 CB LYS 88 1.688 16.394 12.720 1.00 0.00 C ATOM 679 CG LYS 88 2.605 15.278 12.276 1.00 0.00 C ATOM 680 CD LYS 88 3.859 15.829 11.635 1.00 0.00 C ATOM 681 CE LYS 88 4.772 14.685 11.215 1.00 0.00 C ATOM 682 NZ LYS 88 5.990 15.169 10.511 1.00 0.00 N ATOM 683 N LYS 89 0.177 15.402 15.418 1.00 0.00 N ATOM 684 CA LYS 89 0.077 14.526 16.589 1.00 0.00 C ATOM 685 C LYS 89 -1.196 13.692 16.525 1.00 0.00 C ATOM 686 O LYS 89 -1.178 12.480 16.767 1.00 0.00 O ATOM 687 CB LYS 89 0.105 15.404 17.851 1.00 0.00 C ATOM 688 CG LYS 89 0.083 14.662 19.170 1.00 0.00 C ATOM 689 CD LYS 89 0.262 15.657 20.300 1.00 0.00 C ATOM 690 CE LYS 89 0.377 15.019 21.680 1.00 0.00 C ATOM 691 NZ LYS 89 -0.886 14.342 22.159 1.00 0.00 N ATOM 692 N GLU 90 -2.285 14.334 16.143 1.00 0.00 N ATOM 693 CA GLU 90 -3.573 13.658 16.010 1.00 0.00 C ATOM 694 C GLU 90 -3.589 12.674 14.837 1.00 0.00 C ATOM 695 O GLU 90 -4.188 11.595 14.939 1.00 0.00 O ATOM 696 CB GLU 90 -4.673 14.712 15.852 1.00 0.00 C ATOM 697 CG GLU 90 -4.790 15.610 17.091 1.00 0.00 C ATOM 698 CD GLU 90 -5.807 16.732 16.927 1.00 0.00 C ATOM 699 OE1 GLU 90 -6.016 17.267 15.811 1.00 0.00 O ATOM 700 OE2 GLU 90 -6.433 17.115 17.937 1.00 0.00 O ATOM 701 N LEU 91 -2.921 13.012 13.742 1.00 0.00 N ATOM 702 CA LEU 91 -2.813 12.103 12.599 1.00 0.00 C ATOM 703 C LEU 91 -2.004 10.868 12.938 1.00 0.00 C ATOM 704 O LEU 91 -2.389 9.764 12.566 1.00 0.00 O ATOM 705 CB LEU 91 -2.124 12.786 11.405 1.00 0.00 C ATOM 706 CG LEU 91 -2.935 13.801 10.588 1.00 0.00 C ATOM 707 CD1 LEU 91 -2.018 14.544 9.627 1.00 0.00 C ATOM 708 CD2 LEU 91 -4.072 13.146 9.801 1.00 0.00 C ATOM 709 N ALA 92 -0.902 11.038 13.660 1.00 0.00 N ATOM 710 CA ALA 92 -0.056 9.906 14.044 1.00 0.00 C ATOM 711 C ALA 92 -0.850 8.901 14.877 1.00 0.00 C ATOM 712 O ALA 92 -0.748 7.681 14.683 1.00 0.00 O ATOM 713 CB ALA 92 1.175 10.415 14.797 1.00 0.00 C ATOM 714 N ASP 93 -1.679 9.409 15.783 1.00 0.00 N ATOM 715 CA ASP 93 -2.540 8.546 16.588 1.00 0.00 C ATOM 716 C ASP 93 -3.616 7.861 15.753 1.00 0.00 C ATOM 717 O ASP 93 -3.998 6.724 16.040 1.00 0.00 O ATOM 718 CB ASP 93 -3.240 9.344 17.687 1.00 0.00 C ATOM 719 CG ASP 93 -2.373 9.572 18.909 1.00 0.00 C ATOM 720 OD1 ASP 93 -1.212 9.113 18.960 1.00 0.00 O ATOM 721 OD2 ASP 93 -2.865 10.196 19.870 1.00 0.00 O ATOM 722 N ALA 94 -4.109 8.518 14.722 1.00 0.00 N ATOM 723 CA ALA 94 -5.123 7.921 13.849 1.00 0.00 C ATOM 724 C ALA 94 -4.546 6.786 12.994 1.00 0.00 C ATOM 725 O ALA 94 -5.223 5.795 12.705 1.00 0.00 O ATOM 726 CB ALA 94 -5.731 9.010 12.972 1.00 0.00 C ATOM 727 N ILE 95 -3.288 6.917 12.606 1.00 0.00 N ATOM 728 CA ILE 95 -2.580 5.846 11.886 1.00 0.00 C ATOM 729 C ILE 95 -2.433 4.650 12.822 1.00 0.00 C ATOM 730 O ILE 95 -2.690 3.513 12.422 1.00 0.00 O ATOM 731 CB ILE 95 -1.192 6.320 11.377 1.00 0.00 C ATOM 732 CG1 ILE 95 -1.382 7.429 10.325 1.00 0.00 C ATOM 733 CG2 ILE 95 -0.358 5.146 10.765 1.00 0.00 C ATOM 734 CD1 ILE 95 -0.151 8.258 10.038 1.00 0.00 C ATOM 735 N THR 96 -2.091 4.892 14.081 1.00 0.00 N ATOM 736 CA THR 96 -2.010 3.806 15.063 1.00 0.00 C ATOM 737 C THR 96 -3.372 3.138 15.250 1.00 0.00 C ATOM 738 O THR 96 -3.473 1.912 15.286 1.00 0.00 O ATOM 739 CB THR 96 -1.529 4.341 16.431 1.00 0.00 C ATOM 740 OG1 THR 96 -0.289 5.039 16.264 1.00 0.00 O ATOM 741 CG2 THR 96 -1.299 3.240 17.450 1.00 0.00 C ATOM 742 N GLU 97 -4.434 3.924 15.332 1.00 0.00 N ATOM 743 CA GLU 97 -5.776 3.368 15.506 1.00 0.00 C ATOM 744 C GLU 97 -6.161 2.476 14.326 1.00 0.00 C ATOM 745 O GLU 97 -6.698 1.389 14.515 1.00 0.00 O ATOM 746 CB GLU 97 -6.804 4.481 15.701 1.00 0.00 C ATOM 747 CG GLU 97 -8.184 3.965 16.088 1.00 0.00 C ATOM 748 CD GLU 97 -9.163 5.085 16.384 1.00 0.00 C ATOM 749 OE1 GLU 97 -9.503 5.295 17.577 1.00 0.00 O ATOM 750 OE2 GLU 97 -9.625 5.782 15.441 1.00 0.00 O ATOM 751 N ARG 98 -5.835 2.887 13.107 1.00 0.00 N ATOM 752 CA ARG 98 -6.067 2.047 11.924 1.00 0.00 C ATOM 753 C ARG 98 -5.177 0.818 11.902 1.00 0.00 C ATOM 754 O ARG 98 -5.633 -0.251 11.514 1.00 0.00 O ATOM 755 CB ARG 98 -5.807 2.850 10.644 1.00 0.00 C ATOM 756 CG ARG 98 -6.924 3.793 10.202 1.00 0.00 C ATOM 757 CD ARG 98 -8.097 3.036 9.570 1.00 0.00 C ATOM 758 NE ARG 98 -9.255 2.888 10.469 1.00 0.00 N ATOM 759 CZ ARG 98 -10.385 2.260 10.187 1.00 0.00 C ATOM 760 NH1 ARG 98 -11.361 2.332 11.047 1.00 0.00 N ATOM 761 NH2 ARG 98 -10.601 1.585 9.095 1.00 0.00 N ATOM 762 N PHE 99 -3.942 0.920 12.367 1.00 0.00 N ATOM 763 CA PHE 99 -3.039 -0.228 12.404 1.00 0.00 C ATOM 764 C PHE 99 -3.611 -1.265 13.368 1.00 0.00 C ATOM 765 O PHE 99 -3.641 -2.457 13.043 1.00 0.00 O ATOM 766 CB PHE 99 -1.640 0.195 12.857 1.00 0.00 C ATOM 767 CG PHE 99 -0.636 -0.931 12.833 1.00 0.00 C ATOM 768 CD1 PHE 99 0.168 -1.122 11.696 1.00 0.00 C ATOM 769 CD2 PHE 99 -0.483 -1.813 13.921 1.00 0.00 C ATOM 770 CE1 PHE 99 1.071 -2.203 11.605 1.00 0.00 C ATOM 771 CE2 PHE 99 0.434 -2.911 13.849 1.00 0.00 C ATOM 772 CZ PHE 99 1.196 -3.109 12.679 1.00 0.00 C ATOM 773 N LEU 100 -4.091 -0.810 14.517 1.00 0.00 N ATOM 774 CA LEU 100 -4.683 -1.700 15.504 1.00 0.00 C ATOM 775 C LEU 100 -6.001 -2.289 15.008 1.00 0.00 C ATOM 776 O LEU 100 -6.308 -3.438 15.305 1.00 0.00 O ATOM 777 CB LEU 100 -4.958 -0.921 16.800 1.00 0.00 C ATOM 778 CG LEU 100 -3.779 -0.476 17.685 1.00 0.00 C ATOM 779 CD1 LEU 100 -4.276 0.495 18.746 1.00 0.00 C ATOM 780 CD2 LEU 100 -3.114 -1.671 18.377 1.00 0.00 C ATOM 781 N GLU 101 -6.761 -1.516 14.248 1.00 0.00 N ATOM 782 CA GLU 101 -8.046 -1.966 13.706 1.00 0.00 C ATOM 783 C GLU 101 -7.883 -3.091 12.684 1.00 0.00 C ATOM 784 O GLU 101 -8.662 -4.051 12.639 1.00 0.00 O ATOM 785 CB GLU 101 -8.752 -0.784 13.033 1.00 0.00 C ATOM 786 CG GLU 101 -10.235 -0.975 12.762 1.00 0.00 C ATOM 787 CD GLU 101 -11.050 -0.972 14.043 1.00 0.00 C ATOM 788 OE1 GLU 101 -10.994 0.023 14.800 1.00 0.00 O ATOM 789 OE2 GLU 101 -11.797 -1.946 14.304 1.00 0.00 O ATOM 790 N GLU 102 -6.856 -2.982 11.853 1.00 0.00 N ATOM 791 CA GLU 102 -6.615 -3.980 10.819 1.00 0.00 C ATOM 792 C GLU 102 -5.851 -5.207 11.308 1.00 0.00 C ATOM 793 O GLU 102 -6.014 -6.296 10.734 1.00 0.00 O ATOM 794 CB GLU 102 -5.847 -3.360 9.647 1.00 0.00 C ATOM 795 CG GLU 102 -6.689 -2.379 8.848 1.00 0.00 C ATOM 796 CD GLU 102 -5.962 -1.810 7.645 1.00 0.00 C ATOM 797 OE1 GLU 102 -5.413 -2.567 6.806 1.00 0.00 O ATOM 798 OE2 GLU 102 -5.934 -0.570 7.494 1.00 0.00 O ATOM 799 N ALA 103 -5.023 -5.075 12.333 1.00 0.00 N ATOM 800 CA ALA 103 -4.257 -6.208 12.841 1.00 0.00 C ATOM 801 C ALA 103 -5.133 -7.154 13.676 1.00 0.00 C ATOM 802 O ALA 103 -5.739 -6.732 14.669 1.00 0.00 O ATOM 803 CB ALA 103 -3.054 -5.703 13.652 1.00 0.00 C ATOM 804 N LYS 104 -5.187 -8.423 13.296 1.00 0.00 N ATOM 805 CA LYS 104 -5.968 -9.447 13.994 1.00 0.00 C ATOM 806 C LYS 104 -5.035 -10.618 14.283 1.00 0.00 C ATOM 807 O LYS 104 -4.055 -10.812 13.563 1.00 0.00 O ATOM 808 CB LYS 104 -7.129 -9.941 13.122 1.00 0.00 C ATOM 809 CG LYS 104 -8.131 -8.873 12.644 1.00 0.00 C ATOM 810 CD LYS 104 -8.893 -8.212 13.778 1.00 0.00 C ATOM 811 CE LYS 104 -9.891 -7.187 13.274 1.00 0.00 C ATOM 812 NZ LYS 104 -10.503 -6.469 14.447 1.00 0.00 N ATOM 813 N SER 105 -5.351 -11.401 15.298 1.00 0.00 N ATOM 814 CA SER 105 -4.584 -12.594 15.656 1.00 0.00 C ATOM 815 C SER 105 -5.558 -13.436 16.460 1.00 0.00 C ATOM 816 O SER 105 -6.623 -12.934 16.821 1.00 0.00 O ATOM 817 CB SER 105 -3.365 -12.223 16.504 1.00 0.00 C ATOM 818 OG SER 105 -3.764 -11.614 17.715 1.00 0.00 O ATOM 819 N ILE 106 -5.233 -14.686 16.768 1.00 0.00 N ATOM 820 CA ILE 106 -6.102 -15.533 17.594 1.00 0.00 C ATOM 821 C ILE 106 -6.152 -14.950 19.012 1.00 0.00 C ATOM 822 O ILE 106 -7.221 -14.841 19.629 1.00 0.00 O ATOM 823 CB ILE 106 -5.573 -17.009 17.640 1.00 0.00 C ATOM 824 CG1 ILE 106 -5.574 -17.615 16.222 1.00 0.00 C ATOM 825 CG2 ILE 106 -6.444 -17.881 18.581 1.00 0.00 C ATOM 826 CD1 ILE 106 -4.834 -18.954 16.077 1.00 0.00 C ATOM 827 N GLY 107 -4.999 -14.532 19.512 1.00 0.00 N ATOM 828 CA GLY 107 -4.882 -13.969 20.851 1.00 0.00 C ATOM 829 C GLY 107 -5.145 -12.482 20.966 1.00 0.00 C ATOM 830 O GLY 107 -4.684 -11.838 21.918 1.00 0.00 O ATOM 831 N LEU 108 -5.869 -11.922 20.012 1.00 0.00 N ATOM 832 CA LEU 108 -6.230 -10.503 20.025 1.00 0.00 C ATOM 833 C LEU 108 -7.103 -10.193 21.234 1.00 0.00 C ATOM 834 O LEU 108 -7.995 -10.982 21.587 1.00 0.00 O ATOM 835 CB LEU 108 -7.022 -10.205 18.751 1.00 0.00 C ATOM 836 CG LEU 108 -7.452 -8.763 18.474 1.00 0.00 C ATOM 837 CD1 LEU 108 -6.258 -7.873 18.140 1.00 0.00 C ATOM 838 CD2 LEU 108 -8.430 -8.772 17.318 1.00 0.00 C ATOM 839 N ASP 109 -6.887 -9.057 21.873 1.00 0.00 N ATOM 840 CA ASP 109 -7.774 -8.560 22.915 1.00 0.00 C ATOM 841 C ASP 109 -7.889 -7.043 22.791 1.00 0.00 C ATOM 842 O ASP 109 -6.968 -6.373 22.327 1.00 0.00 O ATOM 843 CB ASP 109 -7.262 -8.937 24.309 1.00 0.00 C ATOM 844 CG ASP 109 -7.724 -10.318 24.730 1.00 0.00 C ATOM 845 OD1 ASP 109 -8.917 -10.633 24.548 1.00 0.00 O ATOM 846 OD2 ASP 109 -6.913 -11.116 25.246 1.00 0.00 O ATOM 847 N ASP 110 -9.028 -6.524 23.219 1.00 0.00 N ATOM 848 CA ASP 110 -9.346 -5.097 23.238 1.00 0.00 C ATOM 849 C ASP 110 -9.778 -4.693 24.650 1.00 0.00 C ATOM 850 O ASP 110 -10.413 -3.676 24.885 1.00 0.00 O ATOM 851 CB ASP 110 -10.479 -4.776 22.247 1.00 0.00 C ATOM 852 CG ASP 110 -11.817 -5.416 22.627 1.00 0.00 C ATOM 853 OD1 ASP 110 -11.878 -6.453 23.333 1.00 0.00 O ATOM 854 OD2 ASP 110 -12.847 -4.886 22.145 1.00 0.00 O ATOM 855 N GLN 111 -9.412 -5.532 25.606 1.00 0.00 N ATOM 856 CA GLN 111 -9.824 -5.355 26.993 1.00 0.00 C ATOM 857 C GLN 111 -9.296 -4.053 27.567 1.00 0.00 C ATOM 858 O GLN 111 -9.993 -3.393 28.339 1.00 0.00 O ATOM 859 CB GLN 111 -9.319 -6.515 27.847 1.00 0.00 C ATOM 860 CG GLN 111 -9.919 -7.857 27.459 1.00 0.00 C ATOM 861 CD GLN 111 -9.535 -8.945 28.429 1.00 0.00 C ATOM 862 OE1 GLN 111 -8.374 -9.332 28.541 1.00 0.00 O ATOM 863 NE2 GLN 111 -10.501 -9.416 29.172 1.00 0.00 N ATOM 864 N THR 112 -8.086 -3.659 27.199 1.00 0.00 N ATOM 865 CA THR 112 -7.540 -2.406 27.701 1.00 0.00 C ATOM 866 C THR 112 -8.297 -1.213 27.125 1.00 0.00 C ATOM 867 O THR 112 -8.499 -0.235 27.825 1.00 0.00 O ATOM 868 CB THR 112 -6.042 -2.241 27.377 1.00 0.00 C ATOM 869 OG1 THR 112 -5.824 -2.412 25.975 1.00 0.00 O ATOM 870 CG2 THR 112 -5.205 -3.301 28.076 1.00 0.00 C ATOM 871 N ALA 113 -8.797 -1.298 25.902 1.00 0.00 N ATOM 872 CA ALA 113 -9.556 -0.185 25.329 1.00 0.00 C ATOM 873 C ALA 113 -10.866 0.006 26.094 1.00 0.00 C ATOM 874 O ALA 113 -11.280 1.143 26.336 1.00 0.00 O ATOM 875 CB ALA 113 -9.840 -0.443 23.838 1.00 0.00 C ATOM 876 N ILE 114 -11.488 -1.095 26.489 1.00 0.00 N ATOM 877 CA ILE 114 -12.720 -1.054 27.280 1.00 0.00 C ATOM 878 C ILE 114 -12.428 -0.447 28.652 1.00 0.00 C ATOM 879 O ILE 114 -13.165 0.417 29.134 1.00 0.00 O ATOM 880 CB ILE 114 -13.354 -2.476 27.426 1.00 0.00 C ATOM 881 CG1 ILE 114 -13.681 -3.064 26.042 1.00 0.00 C ATOM 882 CG2 ILE 114 -14.626 -2.435 28.312 1.00 0.00 C ATOM 883 CD1 ILE 114 -13.993 -4.565 26.029 1.00 0.00 C ATOM 884 N GLU 115 -11.331 -0.866 29.268 1.00 0.00 N ATOM 885 CA GLU 115 -10.987 -0.356 30.595 1.00 0.00 C ATOM 886 C GLU 115 -10.657 1.136 30.545 1.00 0.00 C ATOM 887 O GLU 115 -11.060 1.902 31.425 1.00 0.00 O ATOM 888 CB GLU 115 -9.799 -1.139 31.156 1.00 0.00 C ATOM 889 CG GLU 115 -9.537 -0.930 32.645 1.00 0.00 C ATOM 890 CD GLU 115 -10.552 -1.646 33.525 1.00 0.00 C ATOM 891 OE1 GLU 115 -10.659 -2.890 33.450 1.00 0.00 O ATOM 892 OE2 GLU 115 -11.271 -0.989 34.311 1.00 0.00 O ATOM 893 N LEU 116 -9.966 1.562 29.497 1.00 0.00 N ATOM 894 CA LEU 116 -9.649 2.973 29.284 1.00 0.00 C ATOM 895 C LEU 116 -10.922 3.778 29.055 1.00 0.00 C ATOM 896 O LEU 116 -11.053 4.884 29.561 1.00 0.00 O ATOM 897 CB LEU 116 -8.700 3.145 28.091 1.00 0.00 C ATOM 898 CG LEU 116 -7.232 2.707 28.268 1.00 0.00 C ATOM 899 CD1 LEU 116 -6.579 2.520 26.903 1.00 0.00 C ATOM 900 CD2 LEU 116 -6.417 3.708 29.083 1.00 0.00 C ATOM 901 N LEU 117 -11.888 3.220 28.348 1.00 0.00 N ATOM 902 CA LEU 117 -13.157 3.901 28.124 1.00 0.00 C ATOM 903 C LEU 117 -13.922 4.086 29.437 1.00 0.00 C ATOM 904 O LEU 117 -14.557 5.123 29.652 1.00 0.00 O ATOM 905 CB LEU 117 -13.961 3.118 27.086 1.00 0.00 C ATOM 906 CG LEU 117 -15.190 3.789 26.467 1.00 0.00 C ATOM 907 CD1 LEU 117 -14.817 5.069 25.708 1.00 0.00 C ATOM 908 CD2 LEU 117 -15.865 2.813 25.509 1.00 0.00 C ATOM 909 N ILE 118 -13.796 3.140 30.356 1.00 0.00 N ATOM 910 CA ILE 118 -14.370 3.281 31.701 1.00 0.00 C ATOM 911 C ILE 118 -13.607 4.372 32.467 1.00 0.00 C ATOM 912 O ILE 118 -14.219 5.194 33.144 1.00 0.00 O ATOM 913 CB ILE 118 -14.349 1.927 32.490 1.00 0.00 C ATOM 914 CG1 ILE 118 -15.255 0.896 31.789 1.00 0.00 C ATOM 915 CG2 ILE 118 -14.821 2.117 33.956 1.00 0.00 C ATOM 916 CD1 ILE 118 -15.061 -0.561 32.226 1.00 0.00 C ATOM 917 N LYS 119 -12.292 4.468 32.300 1.00 0.00 N ATOM 918 CA LYS 119 -11.522 5.546 32.946 1.00 0.00 C ATOM 919 C LYS 119 -12.004 6.913 32.460 1.00 0.00 C ATOM 920 O LYS 119 -12.148 7.833 33.267 1.00 0.00 O ATOM 921 CB LYS 119 -10.011 5.408 32.719 1.00 0.00 C ATOM 922 CG LYS 119 -9.389 4.202 33.415 1.00 0.00 C ATOM 923 CD LYS 119 -7.946 3.958 32.997 1.00 0.00 C ATOM 924 CE LYS 119 -7.370 2.722 33.698 1.00 0.00 C ATOM 925 NZ LYS 119 -5.956 2.414 33.289 1.00 0.00 N ATOM 926 N ARG 120 -12.327 7.029 31.178 1.00 0.00 N ATOM 927 CA ARG 120 -12.910 8.275 30.653 1.00 0.00 C ATOM 928 C ARG 120 -14.293 8.543 31.233 1.00 0.00 C ATOM 929 O ARG 120 -14.611 9.684 31.569 1.00 0.00 O ATOM 930 CB ARG 120 -13.027 8.247 29.130 1.00 0.00 C ATOM 931 CG ARG 120 -11.739 8.034 28.372 1.00 0.00 C ATOM 932 CD ARG 120 -12.039 8.062 26.882 1.00 0.00 C ATOM 933 NE ARG 120 -10.935 7.561 26.048 1.00 0.00 N ATOM 934 CZ ARG 120 -10.936 7.502 24.722 1.00 0.00 C ATOM 935 NH1 ARG 120 -9.974 6.887 24.109 1.00 0.00 N ATOM 936 NH2 ARG 120 -11.867 8.019 23.972 1.00 0.00 N ATOM 937 N SER 121 -15.106 7.517 31.404 1.00 0.00 N ATOM 938 CA SER 121 -16.419 7.699 32.013 1.00 0.00 C ATOM 939 C SER 121 -16.303 8.227 33.443 1.00 0.00 C ATOM 940 O SER 121 -17.026 9.135 33.840 1.00 0.00 O ATOM 941 CB SER 121 -17.202 6.389 32.019 1.00 0.00 C ATOM 942 OG SER 121 -17.289 5.869 30.706 1.00 0.00 O ATOM 943 N ARG 122 -15.337 7.725 34.196 1.00 0.00 N ATOM 944 CA ARG 122 -15.080 8.237 35.546 1.00 0.00 C ATOM 945 C ARG 122 -14.571 9.678 35.526 1.00 0.00 C ATOM 946 O ARG 122 -14.942 10.474 36.393 1.00 0.00 O ATOM 947 CB ARG 122 -14.070 7.339 36.269 1.00 0.00 C ATOM 948 CG ARG 122 -14.608 5.944 36.558 1.00 0.00 C ATOM 949 CD ARG 122 -13.584 5.100 37.288 1.00 0.00 C ATOM 950 NE ARG 122 -14.073 3.732 37.501 1.00 0.00 N ATOM 951 CZ ARG 122 -13.445 2.746 38.124 1.00 0.00 C ATOM 952 NH1 ARG 122 -13.974 1.562 38.146 1.00 0.00 N ATOM 953 NH2 ARG 122 -12.302 2.899 38.749 1.00 0.00 N ATOM 954 N ASN 123 -13.808 10.048 34.507 1.00 0.00 N ATOM 955 CA ASN 123 -13.360 11.435 34.378 1.00 0.00 C ATOM 956 C ASN 123 -14.527 12.376 34.094 1.00 0.00 C ATOM 957 O ASN 123 -14.493 13.539 34.473 1.00 0.00 O ATOM 958 CB ASN 123 -12.343 11.591 33.240 1.00 0.00 C ATOM 959 CG ASN 123 -11.043 10.911 33.517 1.00 0.00 C ATOM 960 OD1 ASN 123 -10.617 10.771 34.655 1.00 0.00 O ATOM 961 ND2 ASN 123 -10.376 10.507 32.486 1.00 0.00 N TER 982 GLU A 125 END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 313 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 46.73 82.9 76 100.0 76 ARMSMC SECONDARY STRUCTURE . . 41.51 89.1 64 100.0 64 ARMSMC SURFACE . . . . . . . . 43.48 83.3 72 100.0 72 ARMSMC BURIED . . . . . . . . 86.38 75.0 4 100.0 4 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 72.61 61.8 34 100.0 34 ARMSSC1 RELIABLE SIDE CHAINS . 72.61 61.8 34 100.0 34 ARMSSC1 SECONDARY STRUCTURE . . 71.60 60.7 28 100.0 28 ARMSSC1 SURFACE . . . . . . . . 72.61 61.8 34 100.0 34 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 55.46 66.7 30 100.0 30 ARMSSC2 RELIABLE SIDE CHAINS . 58.40 65.2 23 100.0 23 ARMSSC2 SECONDARY STRUCTURE . . 60.10 70.8 24 100.0 24 ARMSSC2 SURFACE . . . . . . . . 55.46 66.7 30 100.0 30 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 76.23 42.9 14 100.0 14 ARMSSC3 RELIABLE SIDE CHAINS . 65.51 50.0 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 79.10 38.5 13 100.0 13 ARMSSC3 SURFACE . . . . . . . . 76.23 42.9 14 100.0 14 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 74.70 42.9 7 100.0 7 ARMSSC4 RELIABLE SIDE CHAINS . 74.70 42.9 7 100.0 7 ARMSSC4 SECONDARY STRUCTURE . . 80.69 33.3 6 100.0 6 ARMSSC4 SURFACE . . . . . . . . 74.70 42.9 7 100.0 7 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 5.15 (Number of atoms: 39) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 5.15 39 100.0 39 CRMSCA CRN = ALL/NP . . . . . 0.1321 CRMSCA SECONDARY STRUCTURE . . 5.07 32 100.0 32 CRMSCA SURFACE . . . . . . . . 5.14 37 100.0 37 CRMSCA BURIED . . . . . . . . 5.36 2 100.0 2 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 5.23 194 100.0 194 CRMSMC SECONDARY STRUCTURE . . 5.08 160 100.0 160 CRMSMC SURFACE . . . . . . . . 5.25 184 100.0 184 CRMSMC BURIED . . . . . . . . 4.89 10 100.0 10 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 8.84 157 100.0 157 CRMSSC RELIABLE SIDE CHAINS . 8.80 139 100.0 139 CRMSSC SECONDARY STRUCTURE . . 9.00 130 100.0 130 CRMSSC SURFACE . . . . . . . . 8.88 155 100.0 155 CRMSSC BURIED . . . . . . . . 5.45 2 100.0 2 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 7.15 313 100.0 313 CRMSALL SECONDARY STRUCTURE . . 7.19 258 100.0 258 CRMSALL SURFACE . . . . . . . . 7.21 303 100.0 303 CRMSALL BURIED . . . . . . . . 4.89 10 100.0 10 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.882 1.000 0.500 39 100.0 39 ERRCA SECONDARY STRUCTURE . . 4.786 1.000 0.500 32 100.0 32 ERRCA SURFACE . . . . . . . . 4.879 1.000 0.500 37 100.0 37 ERRCA BURIED . . . . . . . . 4.937 1.000 0.500 2 100.0 2 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.862 1.000 0.500 194 100.0 194 ERRMC SECONDARY STRUCTURE . . 4.714 1.000 0.500 160 100.0 160 ERRMC SURFACE . . . . . . . . 4.883 1.000 0.500 184 100.0 184 ERRMC BURIED . . . . . . . . 4.490 1.000 0.500 10 100.0 10 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.307 1.000 0.500 157 100.0 157 ERRSC RELIABLE SIDE CHAINS . 8.256 1.000 0.500 139 100.0 139 ERRSC SECONDARY STRUCTURE . . 8.437 1.000 0.500 130 100.0 130 ERRSC SURFACE . . . . . . . . 8.352 1.000 0.500 155 100.0 155 ERRSC BURIED . . . . . . . . 4.862 1.000 0.500 2 100.0 2 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 6.428 1.000 0.500 313 100.0 313 ERRALL SECONDARY STRUCTURE . . 6.415 1.000 0.500 258 100.0 258 ERRALL SURFACE . . . . . . . . 6.492 1.000 0.500 303 100.0 303 ERRALL BURIED . . . . . . . . 4.490 1.000 0.500 10 100.0 10 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 4 23 39 39 39 DISTCA CA (P) 0.00 0.00 10.26 58.97 100.00 39 DISTCA CA (RMS) 0.00 0.00 2.55 3.76 5.15 DISTCA ALL (N) 3 6 35 122 272 313 313 DISTALL ALL (P) 0.96 1.92 11.18 38.98 86.90 313 DISTALL ALL (RMS) 0.83 1.31 2.33 3.70 5.91 DISTALL END of the results output