####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 39 ( 313), selected 39 , name T0586TS208_1-D2 # Molecule2: number of CA atoms 39 ( 313), selected 39 , name T0586-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0586TS208_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 39 85 - 123 1.94 1.94 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 39 85 - 123 1.94 1.94 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 101 - 122 0.97 2.83 LCS_AVERAGE: 52.14 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 39 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT D 85 D 85 9 39 39 0 0 6 9 12 15 30 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT Q 86 Q 86 18 39 39 8 16 24 29 33 36 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 87 L 87 19 39 39 6 12 19 27 30 35 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 88 K 88 20 39 39 7 13 20 27 33 36 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 89 K 89 20 39 39 7 17 20 29 33 36 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 90 E 90 20 39 39 6 13 20 26 33 36 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 91 L 91 20 39 39 7 16 24 29 33 36 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 92 A 92 20 39 39 7 17 20 28 33 36 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT D 93 D 93 20 39 39 7 17 20 28 33 36 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 94 A 94 20 39 39 6 17 24 29 33 36 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 95 I 95 20 39 39 7 17 23 29 33 36 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT T 96 T 96 20 39 39 9 17 20 27 33 36 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 97 E 97 20 39 39 5 17 20 29 33 36 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT R 98 R 98 20 39 39 9 17 24 29 33 36 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT F 99 F 99 20 39 39 9 17 20 29 33 36 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 100 L 100 20 39 39 9 17 20 29 33 36 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 101 E 101 22 39 39 9 17 24 29 33 36 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 102 E 102 22 39 39 9 17 24 29 33 36 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 103 A 103 22 39 39 9 17 24 29 33 36 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 104 K 104 22 39 39 9 17 24 29 33 36 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT S 105 S 105 22 39 39 9 17 24 29 33 36 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 106 I 106 22 39 39 11 17 24 29 33 36 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT G 107 G 107 22 39 39 11 17 24 29 33 36 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 108 L 108 22 39 39 11 17 24 29 33 36 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT D 109 D 109 22 39 39 11 17 24 29 33 36 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT D 110 D 110 22 39 39 11 17 24 29 33 36 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT Q 111 Q 111 22 39 39 11 17 24 29 33 36 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT T 112 T 112 22 39 39 11 17 24 29 33 36 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 113 A 113 22 39 39 11 17 24 29 33 36 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 114 I 114 22 39 39 10 17 24 29 33 36 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 115 E 115 22 39 39 11 17 24 29 33 36 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 116 L 116 22 39 39 11 17 24 29 33 36 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 117 L 117 22 39 39 11 17 24 29 33 36 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 118 I 118 22 39 39 10 17 24 29 33 36 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 119 K 119 22 39 39 10 17 24 29 33 36 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT R 120 R 120 22 39 39 10 17 21 27 33 36 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT S 121 S 121 22 39 39 10 17 24 29 33 36 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT R 122 R 122 22 39 39 1 7 19 27 33 36 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT N 123 N 123 3 39 39 0 3 4 6 21 36 38 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_AVERAGE LCS_A: 84.05 ( 52.14 100.00 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 11 17 24 29 33 36 38 38 39 39 39 39 39 39 39 39 39 39 39 39 GDT PERCENT_AT 28.21 43.59 61.54 74.36 84.62 92.31 97.44 97.44 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.31 0.54 0.94 1.28 1.49 1.66 1.80 1.80 1.94 1.94 1.94 1.94 1.94 1.94 1.94 1.94 1.94 1.94 1.94 1.94 GDT RMS_ALL_AT 3.66 3.65 2.12 2.05 1.97 2.02 1.96 1.96 1.94 1.94 1.94 1.94 1.94 1.94 1.94 1.94 1.94 1.94 1.94 1.94 # Checking swapping # possible swapping detected: D 85 D 85 # possible swapping detected: E 101 E 101 # possible swapping detected: E 102 E 102 # possible swapping detected: D 109 D 109 # possible swapping detected: E 115 E 115 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA D 85 D 85 5.237 0 0.561 1.057 11.803 44.405 23.452 LGA Q 86 Q 86 1.033 0 0.115 0.596 4.277 77.143 62.222 LGA L 87 L 87 3.160 0 0.048 0.592 7.492 59.167 38.571 LGA K 88 K 88 2.708 0 0.070 0.849 12.536 66.905 37.513 LGA K 89 K 89 2.434 0 0.092 1.289 6.720 67.024 45.873 LGA E 90 E 90 2.808 0 0.110 0.214 5.166 62.976 48.889 LGA L 91 L 91 1.355 0 0.094 1.216 4.987 85.952 72.321 LGA A 92 A 92 2.601 0 0.064 0.061 3.613 61.071 57.524 LGA D 93 D 93 3.200 0 0.035 0.174 5.685 57.262 42.500 LGA A 94 A 94 1.378 0 0.067 0.060 1.739 86.190 83.524 LGA I 95 I 95 1.626 0 0.083 0.559 4.720 77.262 65.000 LGA T 96 T 96 2.980 0 0.039 1.223 5.967 59.048 51.156 LGA E 97 E 97 2.232 0 0.088 0.779 4.056 70.952 58.889 LGA R 98 R 98 0.476 0 0.045 0.877 5.397 92.857 77.706 LGA F 99 F 99 1.935 0 0.029 0.140 4.685 75.000 52.814 LGA L 100 L 100 2.090 0 0.057 1.480 4.574 70.833 66.905 LGA E 101 E 101 1.211 0 0.045 1.000 3.640 83.690 74.497 LGA E 102 E 102 0.750 0 0.035 0.821 3.227 92.857 75.767 LGA A 103 A 103 0.830 0 0.029 0.050 1.710 92.857 88.857 LGA K 104 K 104 1.335 0 0.037 0.334 4.352 83.690 66.085 LGA S 105 S 105 1.680 0 0.128 0.709 4.069 77.143 69.762 LGA I 106 I 106 1.021 0 0.225 1.335 2.715 81.548 75.298 LGA G 107 G 107 0.190 0 0.199 0.199 0.561 97.619 97.619 LGA L 108 L 108 0.373 0 0.145 1.487 4.815 92.976 78.929 LGA D 109 D 109 0.851 0 0.000 1.235 4.655 90.476 74.762 LGA D 110 D 110 1.510 0 0.049 0.448 2.611 79.286 75.179 LGA Q 111 Q 111 1.427 0 0.044 1.097 3.239 81.429 75.079 LGA T 112 T 112 0.590 0 0.009 0.072 0.985 92.857 91.837 LGA A 113 A 113 0.908 0 0.051 0.057 1.246 85.952 85.048 LGA I 114 I 114 1.499 0 0.036 0.263 3.145 83.690 72.381 LGA E 115 E 115 0.851 0 0.028 0.755 2.681 90.476 80.847 LGA L 116 L 116 0.866 0 0.055 0.211 1.848 88.214 82.679 LGA L 117 L 117 1.144 0 0.080 1.266 4.422 85.952 76.131 LGA I 118 I 118 0.625 0 0.102 0.279 1.941 88.214 82.679 LGA K 119 K 119 1.684 0 0.121 0.869 2.029 72.976 73.862 LGA R 120 R 120 2.104 0 0.088 1.839 8.464 68.810 47.446 LGA S 121 S 121 1.312 0 0.079 0.117 1.870 81.429 78.571 LGA R 122 R 122 2.341 0 0.453 0.403 3.669 61.667 58.831 LGA N 123 N 123 3.257 0 0.196 1.132 7.421 47.143 37.381 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 39 156 156 100.00 313 313 100.00 39 SUMMARY(RMSD_GDC): 1.945 1.762 3.060 77.308 66.779 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 39 39 4.0 38 1.80 78.846 89.114 2.001 LGA_LOCAL RMSD: 1.799 Number of atoms: 38 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 1.964 Number of assigned atoms: 39 Std_ASGN_ATOMS RMSD: 1.945 Standard rmsd on all 39 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.006832 * X + -0.794456 * Y + 0.607283 * Z + 117.985748 Y_new = -0.608785 * X + -0.485088 * Y + -0.627750 * Z + 101.354218 Z_new = 0.793306 * X + -0.365416 * Y + -0.486967 * Z + -127.040726 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.559574 -0.916219 -2.497841 [DEG: -89.3570 -52.4955 -143.1157 ] ZXZ: 0.768828 2.079410 2.002451 [DEG: 44.0506 119.1414 114.7320 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0586TS208_1-D2 REMARK 2: T0586-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0586TS208_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 39 39 4.0 38 1.80 89.114 1.94 REMARK ---------------------------------------------------------- MOLECULE T0586TS208_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0586 REMARK MODEL 1 REMARK PARENT N/A ATOM 668 N ASP 85 -1.232 21.246 12.831 1.00 0.00 N ATOM 669 CA ASP 85 -2.023 20.151 12.984 1.00 0.00 C ATOM 670 CB ASP 85 -3.953 20.259 13.067 1.00 0.00 C ATOM 671 CG ASP 85 -4.629 20.934 11.776 1.00 0.00 C ATOM 672 OD1 ASP 85 -4.107 21.112 10.765 1.00 0.00 O ATOM 673 OD2 ASP 85 -5.728 21.251 11.517 1.00 0.00 O ATOM 674 C ASP 85 -1.202 19.623 14.205 1.00 0.00 C ATOM 675 O ASP 85 -0.179 18.837 14.352 1.00 0.00 O ATOM 676 N GLN 86 -1.860 20.001 15.303 1.00 0.00 N ATOM 677 CA GLN 86 -2.006 18.831 16.359 1.00 0.00 C ATOM 678 CB GLN 86 -2.688 19.589 17.574 1.00 0.00 C ATOM 679 CG GLN 86 -4.264 19.259 17.483 1.00 0.00 C ATOM 680 CD GLN 86 -3.832 19.377 19.108 1.00 0.00 C ATOM 681 OE1 GLN 86 -2.678 19.842 19.323 1.00 0.00 O ATOM 682 NE2 GLN 86 -3.983 18.043 19.220 1.00 0.00 N ATOM 683 C GLN 86 -2.711 17.556 15.593 1.00 0.00 C ATOM 684 O GLN 86 -2.572 16.333 15.856 1.00 0.00 O ATOM 685 N LEU 87 -3.172 17.985 14.409 1.00 0.00 N ATOM 686 CA LEU 87 -3.626 17.064 13.406 1.00 0.00 C ATOM 687 CB LEU 87 -4.130 17.881 12.121 1.00 0.00 C ATOM 688 CG LEU 87 -5.472 16.981 11.503 1.00 0.00 C ATOM 689 CD1 LEU 87 -6.656 17.269 12.277 1.00 0.00 C ATOM 690 CD2 LEU 87 -5.703 16.792 9.813 1.00 0.00 C ATOM 691 C LEU 87 -2.461 16.086 13.122 1.00 0.00 C ATOM 692 O LEU 87 -2.726 14.896 13.119 1.00 0.00 O ATOM 693 N LYS 88 -1.292 16.620 12.904 1.00 0.00 N ATOM 694 CA LYS 88 -0.178 15.899 12.429 1.00 0.00 C ATOM 695 CB LYS 88 1.028 16.820 12.150 1.00 0.00 C ATOM 696 CG LYS 88 1.629 16.511 10.771 1.00 0.00 C ATOM 697 CD LYS 88 1.615 16.825 9.470 1.00 0.00 C ATOM 698 CE LYS 88 1.620 15.424 8.553 1.00 0.00 C ATOM 699 NZ LYS 88 1.013 16.014 7.121 1.00 0.00 N ATOM 700 C LYS 88 0.097 14.862 13.512 1.00 0.00 C ATOM 701 O LYS 88 0.350 13.657 13.356 1.00 0.00 O ATOM 702 N LYS 89 0.186 15.325 14.776 1.00 0.00 N ATOM 703 CA LYS 89 0.647 14.548 15.872 1.00 0.00 C ATOM 704 CB LYS 89 0.388 15.352 17.151 1.00 0.00 C ATOM 705 CG LYS 89 1.698 15.877 17.287 1.00 0.00 C ATOM 706 CD LYS 89 2.409 15.829 18.488 1.00 0.00 C ATOM 707 CE LYS 89 1.479 15.864 19.751 1.00 0.00 C ATOM 708 NZ LYS 89 1.081 14.475 20.166 1.00 0.00 N ATOM 709 C LYS 89 -0.442 13.428 16.037 1.00 0.00 C ATOM 710 O LYS 89 -0.294 12.156 16.181 1.00 0.00 O ATOM 711 N GLU 90 -1.686 13.931 16.059 1.00 0.00 N ATOM 712 CA GLU 90 -2.803 12.976 16.275 1.00 0.00 C ATOM 713 CB GLU 90 -4.210 13.844 15.754 1.00 0.00 C ATOM 714 CG GLU 90 -4.551 14.835 16.810 1.00 0.00 C ATOM 715 CD GLU 90 -6.021 15.618 16.551 1.00 0.00 C ATOM 716 OE1 GLU 90 -6.607 15.339 15.499 1.00 0.00 O ATOM 717 OE2 GLU 90 -6.652 16.147 17.557 1.00 0.00 O ATOM 718 C GLU 90 -2.643 11.766 15.113 1.00 0.00 C ATOM 719 O GLU 90 -2.789 10.565 15.212 1.00 0.00 O ATOM 720 N LEU 91 -2.613 12.410 13.934 1.00 0.00 N ATOM 721 CA LEU 91 -2.426 11.705 12.622 1.00 0.00 C ATOM 722 CB LEU 91 -1.822 12.467 11.323 1.00 0.00 C ATOM 723 CG LEU 91 -2.240 11.940 10.024 1.00 0.00 C ATOM 724 CD1 LEU 91 -3.281 13.089 9.315 1.00 0.00 C ATOM 725 CD2 LEU 91 -0.860 11.196 9.453 1.00 0.00 C ATOM 726 C LEU 91 -1.454 10.548 12.701 1.00 0.00 C ATOM 727 O LEU 91 -1.787 9.415 12.370 1.00 0.00 O ATOM 728 N ALA 92 -0.218 10.842 13.123 1.00 0.00 N ATOM 729 CA ALA 92 0.734 9.806 13.518 1.00 0.00 C ATOM 730 CB ALA 92 1.953 10.305 14.119 1.00 0.00 C ATOM 731 C ALA 92 0.113 8.725 14.473 1.00 0.00 C ATOM 732 O ALA 92 0.123 7.498 14.317 1.00 0.00 O ATOM 733 N ASP 93 -0.634 9.242 15.429 1.00 0.00 N ATOM 734 CA ASP 93 -1.418 8.430 16.317 1.00 0.00 C ATOM 735 CB ASP 93 -1.999 9.333 17.483 1.00 0.00 C ATOM 736 CG ASP 93 -1.153 9.373 18.703 1.00 0.00 C ATOM 737 OD1 ASP 93 -0.214 8.559 18.592 1.00 0.00 O ATOM 738 OD2 ASP 93 -1.375 10.421 19.346 1.00 0.00 O ATOM 739 C ASP 93 -2.492 7.631 15.609 1.00 0.00 C ATOM 740 O ASP 93 -2.699 6.421 15.849 1.00 0.00 O ATOM 741 N ALA 94 -3.304 8.319 14.795 1.00 0.00 N ATOM 742 CA ALA 94 -4.128 7.587 13.792 1.00 0.00 C ATOM 743 CB ALA 94 -4.718 8.583 12.778 1.00 0.00 C ATOM 744 C ALA 94 -3.373 6.449 13.075 1.00 0.00 C ATOM 745 O ALA 94 -3.946 5.388 12.675 1.00 0.00 O ATOM 746 N ILE 95 -2.123 6.739 12.665 1.00 0.00 N ATOM 747 CA ILE 95 -1.583 5.565 11.766 1.00 0.00 C ATOM 748 CB ILE 95 0.016 5.902 11.409 1.00 0.00 C ATOM 749 CG2 ILE 95 0.788 4.805 10.967 1.00 0.00 C ATOM 750 CG1 ILE 95 0.206 6.763 10.348 1.00 0.00 C ATOM 751 CD1 ILE 95 -0.402 6.833 9.136 1.00 0.00 C ATOM 752 C ILE 95 -1.244 4.397 12.773 1.00 0.00 C ATOM 753 O ILE 95 -1.520 3.142 12.548 1.00 0.00 O ATOM 754 N THR 96 -1.029 4.736 14.042 1.00 0.00 N ATOM 755 CA THR 96 -0.889 3.644 15.030 1.00 0.00 C ATOM 756 CB THR 96 -0.437 4.225 16.418 1.00 0.00 C ATOM 757 OG1 THR 96 0.985 4.437 16.398 1.00 0.00 O ATOM 758 CG2 THR 96 -0.708 3.227 17.615 1.00 0.00 C ATOM 759 C THR 96 -2.230 3.037 15.183 1.00 0.00 C ATOM 760 O THR 96 -2.396 1.813 15.386 1.00 0.00 O ATOM 761 N GLU 97 -3.282 3.868 15.293 1.00 0.00 N ATOM 762 CA GLU 97 -4.619 3.377 15.344 1.00 0.00 C ATOM 763 CB GLU 97 -5.665 4.484 15.648 1.00 0.00 C ATOM 764 CG GLU 97 -6.733 4.105 16.636 1.00 0.00 C ATOM 765 CD GLU 97 -7.925 5.120 16.162 1.00 0.00 C ATOM 766 OE1 GLU 97 -7.389 6.272 16.309 1.00 0.00 O ATOM 767 OE2 GLU 97 -9.049 4.695 15.718 1.00 0.00 O ATOM 768 C GLU 97 -4.923 2.478 14.195 1.00 0.00 C ATOM 769 O GLU 97 -5.701 1.557 14.457 1.00 0.00 O ATOM 770 N ARG 98 -4.543 2.798 12.969 1.00 0.00 N ATOM 771 CA ARG 98 -4.893 1.930 11.870 1.00 0.00 C ATOM 772 CB ARG 98 -4.441 2.292 10.509 1.00 0.00 C ATOM 773 CG ARG 98 -4.983 3.442 9.949 1.00 0.00 C ATOM 774 CD ARG 98 -4.812 3.208 8.453 1.00 0.00 C ATOM 775 NE ARG 98 -3.694 4.140 8.000 1.00 0.00 N ATOM 776 CZ ARG 98 -3.590 4.845 6.830 1.00 0.00 C ATOM 777 NH1 ARG 98 -4.392 4.883 5.710 1.00 0.00 H ATOM 778 NH2 ARG 98 -3.233 6.017 6.821 1.00 0.00 H ATOM 779 C ARG 98 -4.397 0.523 12.191 1.00 0.00 C ATOM 780 O ARG 98 -5.063 -0.491 11.917 1.00 0.00 O ATOM 781 N PHE 99 -3.140 0.417 12.654 1.00 0.00 N ATOM 782 CA PHE 99 -2.529 -0.835 12.853 1.00 0.00 C ATOM 783 CB PHE 99 -1.056 -0.714 13.203 1.00 0.00 C ATOM 784 CG PHE 99 -0.581 -2.257 13.637 1.00 0.00 C ATOM 785 CD1 PHE 99 0.046 -3.036 12.649 1.00 0.00 C ATOM 786 CD2 PHE 99 -0.239 -2.399 14.993 1.00 0.00 C ATOM 787 CE1 PHE 99 0.773 -4.139 12.914 1.00 0.00 C ATOM 788 CE2 PHE 99 0.398 -3.605 15.273 1.00 0.00 C ATOM 789 CZ PHE 99 0.855 -4.306 14.259 1.00 0.00 C ATOM 790 C PHE 99 -3.273 -1.600 13.936 1.00 0.00 C ATOM 791 O PHE 99 -3.562 -2.808 13.750 1.00 0.00 O ATOM 792 N LEU 100 -3.737 -0.943 14.998 1.00 0.00 N ATOM 793 CA LEU 100 -4.458 -1.577 16.053 1.00 0.00 C ATOM 794 CB LEU 100 -4.769 -0.671 17.175 1.00 0.00 C ATOM 795 CG LEU 100 -5.466 -1.372 18.311 1.00 0.00 C ATOM 796 CD1 LEU 100 -4.734 -2.705 18.861 1.00 0.00 C ATOM 797 CD2 LEU 100 -6.148 -0.377 19.265 1.00 0.00 C ATOM 798 C LEU 100 -5.727 -2.135 15.423 1.00 0.00 C ATOM 799 O LEU 100 -6.171 -3.189 15.816 1.00 0.00 O ATOM 800 N GLU 101 -6.508 -1.316 14.622 1.00 0.00 N ATOM 801 CA GLU 101 -7.777 -1.797 14.087 1.00 0.00 C ATOM 802 CB GLU 101 -8.275 -0.639 13.129 1.00 0.00 C ATOM 803 CG GLU 101 -9.667 -0.086 13.430 1.00 0.00 C ATOM 804 CD GLU 101 -10.138 0.811 12.357 1.00 0.00 C ATOM 805 OE1 GLU 101 -9.193 1.180 11.474 1.00 0.00 O ATOM 806 OE2 GLU 101 -11.341 0.620 12.194 1.00 0.00 O ATOM 807 C GLU 101 -7.542 -2.962 13.179 1.00 0.00 C ATOM 808 O GLU 101 -8.394 -3.826 13.196 1.00 0.00 O ATOM 809 N GLU 102 -6.444 -3.045 12.441 1.00 0.00 N ATOM 810 CA GLU 102 -6.159 -4.200 11.630 1.00 0.00 C ATOM 811 CB GLU 102 -4.941 -3.991 10.703 1.00 0.00 C ATOM 812 CG GLU 102 -5.408 -3.282 9.366 1.00 0.00 C ATOM 813 CD GLU 102 -4.144 -2.515 8.901 1.00 0.00 C ATOM 814 OE1 GLU 102 -3.034 -3.063 9.105 1.00 0.00 O ATOM 815 OE2 GLU 102 -4.217 -1.496 8.183 1.00 0.00 O ATOM 816 C GLU 102 -5.983 -5.407 12.583 1.00 0.00 C ATOM 817 O GLU 102 -6.343 -6.562 12.214 1.00 0.00 O ATOM 818 N ALA 103 -5.161 -5.175 13.607 1.00 0.00 N ATOM 819 CA ALA 103 -4.892 -6.246 14.563 1.00 0.00 C ATOM 820 CB ALA 103 -3.923 -5.968 15.622 1.00 0.00 C ATOM 821 C ALA 103 -6.161 -6.826 15.088 1.00 0.00 C ATOM 822 O ALA 103 -6.443 -8.029 15.061 1.00 0.00 O ATOM 823 N LYS 104 -7.087 -5.954 15.516 1.00 0.00 N ATOM 824 CA LYS 104 -8.392 -6.542 15.946 1.00 0.00 C ATOM 825 CB LYS 104 -9.156 -5.290 16.636 1.00 0.00 C ATOM 826 CG LYS 104 -10.749 -5.287 17.067 1.00 0.00 C ATOM 827 CD LYS 104 -10.942 -4.414 18.186 1.00 0.00 C ATOM 828 CE LYS 104 -12.506 -4.465 18.518 1.00 0.00 C ATOM 829 NZ LYS 104 -13.069 -4.174 19.751 1.00 0.00 N ATOM 830 C LYS 104 -9.072 -7.256 14.827 1.00 0.00 C ATOM 831 O LYS 104 -9.718 -8.225 15.109 1.00 0.00 O ATOM 832 N SER 105 -9.161 -6.583 13.666 1.00 0.00 N ATOM 833 CA SER 105 -9.682 -7.420 12.468 1.00 0.00 C ATOM 834 CB SER 105 -9.328 -6.892 11.052 1.00 0.00 C ATOM 835 OG SER 105 -10.389 -5.919 10.931 1.00 0.00 O ATOM 836 C SER 105 -8.992 -8.841 12.270 1.00 0.00 C ATOM 837 O SER 105 -9.512 -9.894 12.000 1.00 0.00 O ATOM 838 N ILE 106 -7.678 -8.868 12.498 1.00 0.00 N ATOM 839 CA ILE 106 -6.915 -10.083 12.501 1.00 0.00 C ATOM 840 CB ILE 106 -5.464 -9.795 12.772 1.00 0.00 C ATOM 841 CG2 ILE 106 -4.757 -11.117 13.019 1.00 0.00 C ATOM 842 CG1 ILE 106 -5.014 -8.981 11.667 1.00 0.00 C ATOM 843 CD1 ILE 106 -3.498 -9.366 11.723 1.00 0.00 C ATOM 844 C ILE 106 -7.552 -11.083 13.528 1.00 0.00 C ATOM 845 O ILE 106 -7.498 -12.288 13.331 1.00 0.00 O ATOM 846 N GLY 107 -7.963 -10.517 14.656 1.00 0.00 N ATOM 847 CA GLY 107 -8.567 -11.511 15.648 1.00 0.00 C ATOM 848 C GLY 107 -7.783 -11.277 16.939 1.00 0.00 C ATOM 849 O GLY 107 -8.062 -11.660 18.098 1.00 0.00 O ATOM 850 N LEU 108 -6.765 -10.388 16.881 1.00 0.00 N ATOM 851 CA LEU 108 -6.259 -10.167 18.237 1.00 0.00 C ATOM 852 CB LEU 108 -5.178 -9.746 17.850 1.00 0.00 C ATOM 853 CG LEU 108 -4.163 -10.917 17.298 1.00 0.00 C ATOM 854 CD1 LEU 108 -2.481 -10.435 17.576 1.00 0.00 C ATOM 855 CD2 LEU 108 -4.576 -12.475 17.598 1.00 0.00 C ATOM 856 C LEU 108 -7.218 -9.206 19.049 1.00 0.00 C ATOM 857 O LEU 108 -7.935 -8.269 18.575 1.00 0.00 O ATOM 858 N ASP 109 -7.472 -9.676 20.274 1.00 0.00 N ATOM 859 CA ASP 109 -8.282 -8.981 21.254 1.00 0.00 C ATOM 860 CB ASP 109 -8.636 -9.949 22.379 1.00 0.00 C ATOM 861 CG ASP 109 -9.422 -11.086 21.991 1.00 0.00 C ATOM 862 OD1 ASP 109 -9.997 -10.789 20.871 1.00 0.00 O ATOM 863 OD2 ASP 109 -9.711 -12.090 22.582 1.00 0.00 O ATOM 864 C ASP 109 -7.547 -7.827 21.836 1.00 0.00 C ATOM 865 O ASP 109 -6.348 -7.720 21.734 1.00 0.00 O ATOM 866 N ASP 110 -8.174 -6.892 22.538 1.00 0.00 N ATOM 867 CA ASP 110 -7.694 -5.746 23.106 1.00 0.00 C ATOM 868 CB ASP 110 -8.758 -4.775 23.526 1.00 0.00 C ATOM 869 CG ASP 110 -9.443 -4.350 22.342 1.00 0.00 C ATOM 870 OD1 ASP 110 -8.620 -3.769 21.465 1.00 0.00 O ATOM 871 OD2 ASP 110 -10.671 -4.300 22.558 1.00 0.00 O ATOM 872 C ASP 110 -6.615 -5.950 24.179 1.00 0.00 C ATOM 873 O ASP 110 -5.551 -5.283 24.261 1.00 0.00 O ATOM 874 N GLN 111 -6.863 -6.981 24.988 1.00 0.00 N ATOM 875 CA GLN 111 -5.938 -7.283 26.128 1.00 0.00 C ATOM 876 CB GLN 111 -6.551 -8.279 27.057 1.00 0.00 C ATOM 877 CG GLN 111 -7.555 -7.662 27.910 1.00 0.00 C ATOM 878 CD GLN 111 -8.426 -8.744 27.982 1.00 0.00 C ATOM 879 OE1 GLN 111 -8.642 -9.133 26.878 1.00 0.00 O ATOM 880 NE2 GLN 111 -9.192 -8.960 29.140 1.00 0.00 N ATOM 881 C GLN 111 -4.663 -7.767 25.518 1.00 0.00 C ATOM 882 O GLN 111 -3.610 -7.349 25.962 1.00 0.00 O ATOM 883 N THR 112 -4.770 -8.561 24.454 1.00 0.00 N ATOM 884 CA THR 112 -3.542 -9.098 23.835 1.00 0.00 C ATOM 885 CB THR 112 -3.928 -10.216 22.830 1.00 0.00 C ATOM 886 OG1 THR 112 -4.824 -11.275 23.319 1.00 0.00 O ATOM 887 CG2 THR 112 -2.708 -10.722 22.100 1.00 0.00 C ATOM 888 C THR 112 -2.748 -8.011 23.136 1.00 0.00 C ATOM 889 O THR 112 -1.549 -7.920 23.325 1.00 0.00 O ATOM 890 N ALA 113 -3.504 -7.075 22.542 1.00 0.00 N ATOM 891 CA ALA 113 -2.840 -6.012 21.800 1.00 0.00 C ATOM 892 CB ALA 113 -3.974 -5.139 21.052 1.00 0.00 C ATOM 893 C ALA 113 -2.096 -5.208 22.801 1.00 0.00 C ATOM 894 O ALA 113 -0.983 -4.772 22.480 1.00 0.00 O ATOM 895 N ILE 114 -2.624 -5.029 24.014 1.00 0.00 N ATOM 896 CA ILE 114 -1.906 -4.179 24.945 1.00 0.00 C ATOM 897 CB ILE 114 -2.591 -3.904 26.270 1.00 0.00 C ATOM 898 CG2 ILE 114 -1.640 -3.252 27.417 1.00 0.00 C ATOM 899 CG1 ILE 114 -3.529 -2.729 26.079 1.00 0.00 C ATOM 900 CD1 ILE 114 -4.197 -2.100 27.532 1.00 0.00 C ATOM 901 C ILE 114 -0.550 -4.837 25.246 1.00 0.00 C ATOM 902 O ILE 114 0.488 -4.163 25.234 1.00 0.00 O ATOM 903 N GLU 115 -0.591 -6.140 25.520 1.00 0.00 N ATOM 904 CA GLU 115 0.710 -6.751 25.983 1.00 0.00 C ATOM 905 CB GLU 115 0.461 -8.205 26.421 1.00 0.00 C ATOM 906 CG GLU 115 0.268 -8.552 27.637 1.00 0.00 C ATOM 907 CD GLU 115 -0.643 -9.971 27.599 1.00 0.00 C ATOM 908 OE1 GLU 115 -0.853 -10.760 26.676 1.00 0.00 O ATOM 909 OE2 GLU 115 -1.046 -10.416 28.657 1.00 0.00 O ATOM 910 C GLU 115 1.690 -6.807 24.829 1.00 0.00 C ATOM 911 O GLU 115 2.907 -6.505 24.957 1.00 0.00 O ATOM 912 N LEU 116 1.193 -6.983 23.609 1.00 0.00 N ATOM 913 CA LEU 116 2.019 -7.007 22.447 1.00 0.00 C ATOM 914 CB LEU 116 1.301 -7.271 21.191 1.00 0.00 C ATOM 915 CG LEU 116 0.910 -8.647 20.960 1.00 0.00 C ATOM 916 CD1 LEU 116 -0.272 -8.558 19.878 1.00 0.00 C ATOM 917 CD2 LEU 116 1.950 -9.506 20.570 1.00 0.00 C ATOM 918 C LEU 116 2.645 -5.652 22.284 1.00 0.00 C ATOM 919 O LEU 116 3.791 -5.627 21.983 1.00 0.00 O ATOM 920 N LEU 117 1.853 -4.576 22.423 1.00 0.00 N ATOM 921 CA LEU 117 2.367 -3.237 22.170 1.00 0.00 C ATOM 922 CB LEU 117 1.199 -2.232 22.527 1.00 0.00 C ATOM 923 CG LEU 117 0.888 -1.021 21.603 1.00 0.00 C ATOM 924 CD1 LEU 117 0.378 0.299 22.258 1.00 0.00 C ATOM 925 CD2 LEU 117 1.559 -1.127 20.392 1.00 0.00 C ATOM 926 C LEU 117 3.499 -3.010 23.191 1.00 0.00 C ATOM 927 O LEU 117 4.474 -2.296 22.900 1.00 0.00 O ATOM 928 N ILE 118 3.298 -3.534 24.391 1.00 0.00 N ATOM 929 CA ILE 118 4.296 -3.203 25.440 1.00 0.00 C ATOM 930 CB ILE 118 3.911 -3.735 26.858 1.00 0.00 C ATOM 931 CG2 ILE 118 5.007 -4.237 27.743 1.00 0.00 C ATOM 932 CG1 ILE 118 2.597 -3.041 27.274 1.00 0.00 C ATOM 933 CD1 ILE 118 2.394 -3.306 28.862 1.00 0.00 C ATOM 934 C ILE 118 5.667 -3.910 25.002 1.00 0.00 C ATOM 935 O ILE 118 6.778 -3.314 24.797 1.00 0.00 O ATOM 936 N LYS 119 5.495 -5.125 24.517 1.00 0.00 N ATOM 937 CA LYS 119 6.622 -5.905 23.986 1.00 0.00 C ATOM 938 CB LYS 119 6.028 -7.351 23.568 1.00 0.00 C ATOM 939 CG LYS 119 5.801 -8.232 24.974 1.00 0.00 C ATOM 940 CD LYS 119 5.756 -9.825 24.502 1.00 0.00 C ATOM 941 CE LYS 119 7.029 -10.102 24.872 1.00 0.00 C ATOM 942 NZ LYS 119 7.499 -11.208 25.718 1.00 0.00 N ATOM 943 C LYS 119 7.209 -5.185 22.885 1.00 0.00 C ATOM 944 O LYS 119 8.402 -4.884 23.055 1.00 0.00 O ATOM 945 N ARG 120 6.535 -4.835 21.807 1.00 0.00 N ATOM 946 CA ARG 120 7.109 -4.064 20.786 1.00 0.00 C ATOM 947 CB ARG 120 6.077 -3.790 19.801 1.00 0.00 C ATOM 948 CG ARG 120 7.022 -3.681 18.757 1.00 0.00 C ATOM 949 CD ARG 120 6.400 -2.616 17.868 1.00 0.00 C ATOM 950 NE ARG 120 6.760 -1.251 18.137 1.00 0.00 N ATOM 951 CZ ARG 120 5.875 -0.440 18.729 1.00 0.00 C ATOM 952 NH1 ARG 120 5.147 -1.140 19.688 1.00 0.00 H ATOM 953 NH2 ARG 120 4.714 0.170 18.267 1.00 0.00 H ATOM 954 C ARG 120 7.926 -2.888 21.269 1.00 0.00 C ATOM 955 O ARG 120 8.859 -2.670 20.575 1.00 0.00 O ATOM 956 N SER 121 7.333 -2.126 22.204 1.00 0.00 N ATOM 957 CA SER 121 7.964 -0.886 22.537 1.00 0.00 C ATOM 958 CB SER 121 7.143 0.140 22.446 1.00 0.00 C ATOM 959 OG SER 121 7.729 1.535 22.621 1.00 0.00 O ATOM 960 C SER 121 9.009 -0.918 23.679 1.00 0.00 C ATOM 961 O SER 121 10.135 -0.312 23.452 1.00 0.00 O ATOM 962 N ARG 122 8.808 -1.302 24.959 1.00 0.00 N ATOM 963 CA ARG 122 9.425 -0.678 26.071 1.00 0.00 C ATOM 964 CB ARG 122 8.645 -0.553 27.214 1.00 0.00 C ATOM 965 CG ARG 122 7.799 0.462 27.441 1.00 0.00 C ATOM 966 CD ARG 122 7.428 -0.157 28.836 1.00 0.00 C ATOM 967 NE ARG 122 5.809 0.037 29.313 1.00 0.00 N ATOM 968 CZ ARG 122 5.408 0.201 30.551 1.00 0.00 C ATOM 969 NH1 ARG 122 6.195 -0.070 31.579 1.00 0.00 H ATOM 970 NH2 ARG 122 4.452 1.282 30.582 1.00 0.00 H ATOM 971 C ARG 122 10.863 -1.154 26.069 1.00 0.00 C ATOM 972 O ARG 122 11.701 -0.552 25.443 1.00 0.00 O ATOM 973 N ASN 123 11.153 -2.164 26.895 1.00 0.00 N ATOM 974 CA ASN 123 12.158 -3.123 26.735 1.00 0.00 C ATOM 975 CB ASN 123 11.805 -4.298 27.728 1.00 0.00 C ATOM 976 CG ASN 123 13.035 -4.036 28.307 1.00 0.00 C ATOM 977 OD1 ASN 123 13.078 -3.498 29.366 1.00 0.00 O ATOM 978 ND2 ASN 123 14.071 -4.198 27.539 1.00 0.00 N ATOM 979 C ASN 123 12.629 -3.341 25.267 1.00 0.00 C ATOM 980 O ASN 123 12.553 -2.518 24.356 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 313 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 27.03 89.5 76 100.0 76 ARMSMC SECONDARY STRUCTURE . . 11.98 96.9 64 100.0 64 ARMSMC SURFACE . . . . . . . . 27.72 88.9 72 100.0 72 ARMSMC BURIED . . . . . . . . 7.05 100.0 4 100.0 4 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 72.74 44.1 34 100.0 34 ARMSSC1 RELIABLE SIDE CHAINS . 72.74 44.1 34 100.0 34 ARMSSC1 SECONDARY STRUCTURE . . 64.26 50.0 28 100.0 28 ARMSSC1 SURFACE . . . . . . . . 72.74 44.1 34 100.0 34 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 75.92 50.0 30 100.0 30 ARMSSC2 RELIABLE SIDE CHAINS . 58.10 56.5 23 100.0 23 ARMSSC2 SECONDARY STRUCTURE . . 68.96 54.2 24 100.0 24 ARMSSC2 SURFACE . . . . . . . . 75.92 50.0 30 100.0 30 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 69.47 21.4 14 100.0 14 ARMSSC3 RELIABLE SIDE CHAINS . 54.84 16.7 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 71.37 23.1 13 100.0 13 ARMSSC3 SURFACE . . . . . . . . 69.47 21.4 14 100.0 14 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 100.28 28.6 7 100.0 7 ARMSSC4 RELIABLE SIDE CHAINS . 100.28 28.6 7 100.0 7 ARMSSC4 SECONDARY STRUCTURE . . 107.39 33.3 6 100.0 6 ARMSSC4 SURFACE . . . . . . . . 100.28 28.6 7 100.0 7 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 1.94 (Number of atoms: 39) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 1.94 39 100.0 39 CRMSCA CRN = ALL/NP . . . . . 0.0499 CRMSCA SECONDARY STRUCTURE . . 1.85 32 100.0 32 CRMSCA SURFACE . . . . . . . . 1.99 37 100.0 37 CRMSCA BURIED . . . . . . . . 0.87 2 100.0 2 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 1.96 194 100.0 194 CRMSMC SECONDARY STRUCTURE . . 1.85 160 100.0 160 CRMSMC SURFACE . . . . . . . . 2.00 184 100.0 184 CRMSMC BURIED . . . . . . . . 0.99 10 100.0 10 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 3.97 157 100.0 157 CRMSSC RELIABLE SIDE CHAINS . 3.94 139 100.0 139 CRMSSC SECONDARY STRUCTURE . . 3.77 130 100.0 130 CRMSSC SURFACE . . . . . . . . 3.99 155 100.0 155 CRMSSC BURIED . . . . . . . . 1.49 2 100.0 2 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 3.08 313 100.0 313 CRMSALL SECONDARY STRUCTURE . . 2.92 258 100.0 258 CRMSALL SURFACE . . . . . . . . 3.12 303 100.0 303 CRMSALL BURIED . . . . . . . . 0.99 10 100.0 10 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.702 1.000 0.500 39 100.0 39 ERRCA SECONDARY STRUCTURE . . 1.680 1.000 0.500 32 100.0 32 ERRCA SURFACE . . . . . . . . 1.747 1.000 0.500 37 100.0 37 ERRCA BURIED . . . . . . . . 0.870 1.000 0.500 2 100.0 2 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.698 1.000 0.500 194 100.0 194 ERRMC SECONDARY STRUCTURE . . 1.656 1.000 0.500 160 100.0 160 ERRMC SURFACE . . . . . . . . 1.740 1.000 0.500 184 100.0 184 ERRMC BURIED . . . . . . . . 0.925 1.000 0.500 10 100.0 10 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.340 1.000 0.500 157 100.0 157 ERRSC RELIABLE SIDE CHAINS . 3.295 1.000 0.500 139 100.0 139 ERRSC SECONDARY STRUCTURE . . 3.212 1.000 0.500 130 100.0 130 ERRSC SURFACE . . . . . . . . 3.364 1.000 0.500 155 100.0 155 ERRSC BURIED . . . . . . . . 1.469 1.000 0.500 2 100.0 2 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.449 1.000 0.500 313 100.0 313 ERRALL SECONDARY STRUCTURE . . 2.373 1.000 0.500 258 100.0 258 ERRALL SURFACE . . . . . . . . 2.500 1.000 0.500 303 100.0 303 ERRALL BURIED . . . . . . . . 0.925 1.000 0.500 10 100.0 10 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 10 27 34 39 39 39 39 DISTCA CA (P) 25.64 69.23 87.18 100.00 100.00 39 DISTCA CA (RMS) 0.73 1.26 1.58 1.94 1.94 DISTCA ALL (N) 55 169 236 287 310 313 313 DISTALL ALL (P) 17.57 53.99 75.40 91.69 99.04 313 DISTALL ALL (RMS) 0.74 1.33 1.75 2.31 2.89 DISTALL END of the results output