####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 38 ( 308), selected 38 , name T0586TS173_1-D2 # Molecule2: number of CA atoms 39 ( 313), selected 38 , name T0586-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0586TS173_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 38 85 - 122 2.38 2.38 LCS_AVERAGE: 97.44 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 36 85 - 120 1.93 2.43 LCS_AVERAGE: 91.77 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 30 85 - 114 0.90 2.73 LCS_AVERAGE: 72.47 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 38 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT D 85 D 85 30 36 38 18 25 28 30 31 33 34 35 36 37 38 38 38 38 38 38 38 38 38 38 LCS_GDT Q 86 Q 86 30 36 38 19 25 28 30 31 33 34 35 36 37 38 38 38 38 38 38 38 38 38 38 LCS_GDT L 87 L 87 30 36 38 19 25 28 30 31 33 34 35 36 37 38 38 38 38 38 38 38 38 38 38 LCS_GDT K 88 K 88 30 36 38 19 25 28 30 31 33 34 35 36 37 38 38 38 38 38 38 38 38 38 38 LCS_GDT K 89 K 89 30 36 38 19 25 28 30 31 33 34 35 36 37 38 38 38 38 38 38 38 38 38 38 LCS_GDT E 90 E 90 30 36 38 19 25 28 30 31 33 34 35 36 37 38 38 38 38 38 38 38 38 38 38 LCS_GDT L 91 L 91 30 36 38 19 25 28 30 31 33 34 35 36 37 38 38 38 38 38 38 38 38 38 38 LCS_GDT A 92 A 92 30 36 38 19 25 28 30 31 33 34 35 36 37 38 38 38 38 38 38 38 38 38 38 LCS_GDT D 93 D 93 30 36 38 19 25 28 30 31 33 34 35 36 37 38 38 38 38 38 38 38 38 38 38 LCS_GDT A 94 A 94 30 36 38 19 25 28 30 31 33 34 35 36 37 38 38 38 38 38 38 38 38 38 38 LCS_GDT I 95 I 95 30 36 38 19 25 28 30 31 33 34 35 36 37 38 38 38 38 38 38 38 38 38 38 LCS_GDT T 96 T 96 30 36 38 19 25 28 30 31 33 34 35 36 37 38 38 38 38 38 38 38 38 38 38 LCS_GDT E 97 E 97 30 36 38 19 25 28 30 31 33 34 35 36 37 38 38 38 38 38 38 38 38 38 38 LCS_GDT R 98 R 98 30 36 38 19 25 28 30 31 33 34 35 36 37 38 38 38 38 38 38 38 38 38 38 LCS_GDT F 99 F 99 30 36 38 19 25 28 30 31 33 34 35 36 37 38 38 38 38 38 38 38 38 38 38 LCS_GDT L 100 L 100 30 36 38 19 25 28 30 31 33 34 35 36 37 38 38 38 38 38 38 38 38 38 38 LCS_GDT E 101 E 101 30 36 38 19 25 28 30 31 33 34 35 36 37 38 38 38 38 38 38 38 38 38 38 LCS_GDT E 102 E 102 30 36 38 19 25 28 30 31 33 34 35 36 37 38 38 38 38 38 38 38 38 38 38 LCS_GDT A 103 A 103 30 36 38 19 25 28 30 31 33 34 35 36 37 38 38 38 38 38 38 38 38 38 38 LCS_GDT K 104 K 104 30 36 38 19 25 28 30 31 33 34 35 36 37 38 38 38 38 38 38 38 38 38 38 LCS_GDT S 105 S 105 30 36 38 19 25 28 30 31 33 34 35 36 37 38 38 38 38 38 38 38 38 38 38 LCS_GDT I 106 I 106 30 36 38 12 25 28 30 31 33 34 35 36 37 38 38 38 38 38 38 38 38 38 38 LCS_GDT G 107 G 107 30 36 38 12 25 28 30 31 33 34 35 36 37 38 38 38 38 38 38 38 38 38 38 LCS_GDT L 108 L 108 30 36 38 13 25 28 30 31 33 34 35 36 37 38 38 38 38 38 38 38 38 38 38 LCS_GDT D 109 D 109 30 36 38 5 16 28 30 31 33 34 35 36 37 38 38 38 38 38 38 38 38 38 38 LCS_GDT D 110 D 110 30 36 38 11 16 28 30 31 33 34 35 36 37 38 38 38 38 38 38 38 38 38 38 LCS_GDT Q 111 Q 111 30 36 38 13 25 28 30 31 33 34 35 36 37 38 38 38 38 38 38 38 38 38 38 LCS_GDT T 112 T 112 30 36 38 11 18 28 30 31 33 34 35 36 37 38 38 38 38 38 38 38 38 38 38 LCS_GDT A 113 A 113 30 36 38 11 16 22 30 31 33 34 35 36 37 38 38 38 38 38 38 38 38 38 38 LCS_GDT I 114 I 114 30 36 38 11 16 22 30 31 33 34 35 36 37 38 38 38 38 38 38 38 38 38 38 LCS_GDT E 115 E 115 29 36 38 11 16 21 29 31 33 34 35 36 37 38 38 38 38 38 38 38 38 38 38 LCS_GDT L 116 L 116 21 36 38 11 16 19 22 26 33 34 35 36 37 38 38 38 38 38 38 38 38 38 38 LCS_GDT L 117 L 117 21 36 38 11 16 19 22 25 31 34 35 36 37 38 38 38 38 38 38 38 38 38 38 LCS_GDT I 118 I 118 21 36 38 11 16 19 23 28 33 34 35 36 37 38 38 38 38 38 38 38 38 38 38 LCS_GDT K 119 K 119 21 36 38 11 14 19 22 25 27 32 35 36 37 38 38 38 38 38 38 38 38 38 38 LCS_GDT R 120 R 120 21 36 38 11 16 19 21 24 27 28 34 35 37 38 38 38 38 38 38 38 38 38 38 LCS_GDT S 121 S 121 21 34 38 11 16 19 22 24 27 30 34 36 37 38 38 38 38 38 38 38 38 38 38 LCS_GDT R 122 R 122 19 30 38 0 3 3 3 15 23 25 28 32 33 38 38 38 38 38 38 38 38 38 38 LCS_AVERAGE LCS_A: 87.22 ( 72.47 91.77 97.44 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 19 25 28 30 31 33 34 35 36 37 38 38 38 38 38 38 38 38 38 38 GDT PERCENT_AT 48.72 64.10 71.79 76.92 79.49 84.62 87.18 89.74 92.31 94.87 97.44 97.44 97.44 97.44 97.44 97.44 97.44 97.44 97.44 97.44 GDT RMS_LOCAL 0.28 0.53 0.69 0.90 1.01 1.35 1.51 1.69 1.90 2.09 2.38 2.38 2.38 2.38 2.38 2.38 2.38 2.38 2.38 2.38 GDT RMS_ALL_AT 3.29 2.92 2.85 2.73 2.68 2.57 2.52 2.48 2.42 2.40 2.38 2.38 2.38 2.38 2.38 2.38 2.38 2.38 2.38 2.38 # Checking swapping # possible swapping detected: D 85 D 85 # possible swapping detected: E 101 E 101 # possible swapping detected: E 115 E 115 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA D 85 D 85 2.186 0 0.053 0.112 2.374 66.786 65.774 LGA Q 86 Q 86 1.951 0 0.042 1.492 6.011 70.833 55.767 LGA L 87 L 87 1.277 0 0.023 1.406 3.594 81.548 69.881 LGA K 88 K 88 1.203 0 0.014 0.630 3.223 81.429 76.032 LGA K 89 K 89 1.781 0 0.014 0.729 4.150 75.000 58.413 LGA E 90 E 90 1.317 0 0.033 0.173 2.002 81.429 76.720 LGA L 91 L 91 0.565 0 0.018 0.075 0.799 90.476 91.667 LGA A 92 A 92 1.069 0 0.027 0.030 1.391 83.690 83.238 LGA D 93 D 93 1.180 0 0.007 0.053 2.049 85.952 79.464 LGA A 94 A 94 0.559 0 0.002 0.009 0.699 95.238 94.286 LGA I 95 I 95 0.592 0 0.009 0.059 1.069 92.857 89.405 LGA T 96 T 96 0.706 0 0.052 1.144 2.874 90.476 80.952 LGA E 97 E 97 0.748 0 0.044 0.982 3.402 95.238 79.577 LGA R 98 R 98 0.242 0 0.059 1.135 5.713 100.000 71.126 LGA F 99 F 99 0.744 0 0.039 0.056 1.716 90.476 82.381 LGA L 100 L 100 0.481 0 0.048 0.121 0.732 92.857 95.238 LGA E 101 E 101 0.578 0 0.021 0.303 1.304 90.476 89.471 LGA E 102 E 102 0.508 0 0.007 0.741 2.583 95.238 86.984 LGA A 103 A 103 0.453 0 0.068 0.072 0.616 95.238 94.286 LGA K 104 K 104 0.529 0 0.022 0.728 3.610 90.476 76.825 LGA S 105 S 105 0.599 0 0.096 0.710 2.435 90.476 86.190 LGA I 106 I 106 0.556 0 0.293 1.374 2.984 90.595 81.964 LGA G 107 G 107 0.916 0 0.031 0.031 0.934 90.476 90.476 LGA L 108 L 108 0.724 0 0.153 1.447 3.231 83.810 75.714 LGA D 109 D 109 1.656 0 0.013 1.035 3.315 83.929 74.524 LGA D 110 D 110 1.529 0 0.017 0.177 3.815 79.405 67.500 LGA Q 111 Q 111 0.264 0 0.053 0.907 2.885 95.238 82.222 LGA T 112 T 112 1.042 0 0.013 0.066 1.858 81.548 80.272 LGA A 113 A 113 1.603 0 0.032 0.036 2.492 72.976 72.952 LGA I 114 I 114 1.777 0 0.009 0.051 2.396 70.833 71.905 LGA E 115 E 115 2.052 0 0.018 0.754 3.044 61.190 62.540 LGA L 116 L 116 3.351 0 0.018 0.240 4.294 46.905 49.345 LGA L 117 L 117 3.881 0 0.043 1.372 6.508 42.024 38.988 LGA I 118 I 118 3.292 0 0.015 0.044 4.150 45.119 55.119 LGA K 119 K 119 4.609 0 0.043 1.071 5.565 30.595 31.693 LGA R 120 R 120 5.987 0 0.015 1.145 9.825 19.524 15.887 LGA S 121 S 121 5.633 0 0.611 0.529 8.080 15.238 15.873 LGA R 122 R 122 8.102 0 0.473 0.969 12.602 4.524 25.974 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 38 152 152 100.00 305 305 100.00 39 SUMMARY(RMSD_GDC): 2.375 2.580 2.863 73.080 68.631 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 38 39 4.0 35 1.69 82.051 86.718 1.958 LGA_LOCAL RMSD: 1.687 Number of atoms: 35 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.476 Number of assigned atoms: 38 Std_ASGN_ATOMS RMSD: 2.375 Standard rmsd on all 38 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.821330 * X + -0.465490 * Y + -0.329753 * Z + 39.431900 Y_new = 0.035412 * X + 0.618543 * Y + -0.784952 * Z + -19.227003 Z_new = 0.569354 * X + 0.633027 * Y + 0.524512 * Z + -54.293167 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.043089 -0.605719 0.878872 [DEG: 2.4688 -34.7052 50.3556 ] ZXZ: -0.397707 1.018655 0.732491 [DEG: -22.7869 58.3646 41.9686 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0586TS173_1-D2 REMARK 2: T0586-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0586TS173_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 38 39 4.0 35 1.69 86.718 2.38 REMARK ---------------------------------------------------------- MOLECULE T0586TS173_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0586 REMARK MODEL 1 REMARK PARENT N/A ATOM 1321 N ASP 85 3.349 19.423 16.799 1.00 0.00 N ATOM 1322 CA ASP 85 2.852 18.530 17.840 1.00 0.00 C ATOM 1323 C ASP 85 1.476 17.982 17.486 1.00 0.00 C ATOM 1324 O ASP 85 1.237 16.777 17.564 1.00 0.00 O ATOM 1325 CB ASP 85 2.798 19.252 19.188 1.00 0.00 C ATOM 1326 CG ASP 85 4.162 19.518 19.814 1.00 0.00 C ATOM 1327 OD1 ASP 85 5.123 18.943 19.361 1.00 0.00 O ATOM 1328 OD2 ASP 85 4.256 20.403 20.630 1.00 0.00 O ATOM 1333 N GLN 86 0.572 18.875 17.097 1.00 0.00 N ATOM 1334 CA GLN 86 -0.814 18.499 16.836 1.00 0.00 C ATOM 1335 C GLN 86 -0.912 17.551 15.649 1.00 0.00 C ATOM 1336 O GLN 86 -1.661 16.576 15.682 1.00 0.00 O ATOM 1337 CB GLN 86 -1.666 19.744 16.575 1.00 0.00 C ATOM 1338 CG GLN 86 -1.955 20.572 17.816 1.00 0.00 C ATOM 1339 CD GLN 86 -2.689 21.860 17.494 1.00 0.00 C ATOM 1340 OE1 GLN 86 -2.944 22.171 16.326 1.00 0.00 O ATOM 1341 NE2 GLN 86 -3.030 22.620 18.529 1.00 0.00 N ATOM 1350 N LEU 87 -0.151 17.845 14.599 1.00 0.00 N ATOM 1351 CA LEU 87 -0.152 17.018 13.398 1.00 0.00 C ATOM 1352 C LEU 87 0.394 15.626 13.687 1.00 0.00 C ATOM 1353 O LEU 87 -0.147 14.626 13.214 1.00 0.00 O ATOM 1354 CB LEU 87 0.665 17.694 12.290 1.00 0.00 C ATOM 1355 CG LEU 87 0.030 18.954 11.687 1.00 0.00 C ATOM 1356 CD1 LEU 87 1.000 19.614 10.716 1.00 0.00 C ATOM 1357 CD2 LEU 87 -1.267 18.584 10.983 1.00 0.00 C ATOM 1369 N LYS 88 1.469 15.568 14.465 1.00 0.00 N ATOM 1370 CA LYS 88 2.079 14.296 14.835 1.00 0.00 C ATOM 1371 C LYS 88 1.130 13.459 15.684 1.00 0.00 C ATOM 1372 O LYS 88 1.042 12.243 15.515 1.00 0.00 O ATOM 1373 CB LYS 88 3.391 14.529 15.586 1.00 0.00 C ATOM 1374 CG LYS 88 4.165 13.258 15.908 1.00 0.00 C ATOM 1375 CD LYS 88 5.507 13.577 16.552 1.00 0.00 C ATOM 1376 CE LYS 88 6.360 12.326 16.700 1.00 0.00 C ATOM 1377 NZ LYS 88 5.760 11.352 17.654 1.00 0.00 N ATOM 1391 N LYS 89 0.423 14.116 16.596 1.00 0.00 N ATOM 1392 CA LYS 89 -0.531 13.435 17.464 1.00 0.00 C ATOM 1393 C LYS 89 -1.691 12.862 16.662 1.00 0.00 C ATOM 1394 O LYS 89 -2.139 11.742 16.912 1.00 0.00 O ATOM 1395 CB LYS 89 -1.054 14.388 18.539 1.00 0.00 C ATOM 1396 CG LYS 89 -0.042 14.731 19.623 1.00 0.00 C ATOM 1397 CD LYS 89 -0.606 15.746 20.607 1.00 0.00 C ATOM 1398 CE LYS 89 0.425 16.132 21.657 1.00 0.00 C ATOM 1399 NZ LYS 89 -0.112 17.128 22.624 1.00 0.00 N ATOM 1413 N GLU 90 -2.177 13.636 15.696 1.00 0.00 N ATOM 1414 CA GLU 90 -3.288 13.206 14.856 1.00 0.00 C ATOM 1415 C GLU 90 -2.900 12.003 14.005 1.00 0.00 C ATOM 1416 O GLU 90 -3.670 11.051 13.873 1.00 0.00 O ATOM 1417 CB GLU 90 -3.757 14.354 13.960 1.00 0.00 C ATOM 1418 CG GLU 90 -4.524 15.448 14.691 1.00 0.00 C ATOM 1419 CD GLU 90 -4.780 16.628 13.796 1.00 0.00 C ATOM 1420 OE1 GLU 90 -4.307 16.619 12.684 1.00 0.00 O ATOM 1421 OE2 GLU 90 -5.538 17.486 14.180 1.00 0.00 O ATOM 1428 N LEU 91 -1.704 12.053 13.428 1.00 0.00 N ATOM 1429 CA LEU 91 -1.204 10.958 12.605 1.00 0.00 C ATOM 1430 C LEU 91 -0.926 9.719 13.446 1.00 0.00 C ATOM 1431 O LEU 91 -1.147 8.593 13.002 1.00 0.00 O ATOM 1432 CB LEU 91 0.063 11.392 11.859 1.00 0.00 C ATOM 1433 CG LEU 91 -0.156 12.427 10.747 1.00 0.00 C ATOM 1434 CD1 LEU 91 1.185 12.899 10.202 1.00 0.00 C ATOM 1435 CD2 LEU 91 -1.002 11.813 9.641 1.00 0.00 C ATOM 1447 N ALA 92 -0.438 9.933 14.663 1.00 0.00 N ATOM 1448 CA ALA 92 -0.186 8.838 15.592 1.00 0.00 C ATOM 1449 C ALA 92 -1.482 8.146 15.991 1.00 0.00 C ATOM 1450 O ALA 92 -1.527 6.923 16.126 1.00 0.00 O ATOM 1451 CB ALA 92 0.548 9.347 16.825 1.00 0.00 C ATOM 1457 N ASP 93 -2.536 8.934 16.177 1.00 0.00 N ATOM 1458 CA ASP 93 -3.851 8.391 16.495 1.00 0.00 C ATOM 1459 C ASP 93 -4.408 7.580 15.332 1.00 0.00 C ATOM 1460 O ASP 93 -5.021 6.532 15.531 1.00 0.00 O ATOM 1461 CB ASP 93 -4.820 9.517 16.863 1.00 0.00 C ATOM 1462 CG ASP 93 -4.577 10.133 18.234 1.00 0.00 C ATOM 1463 OD1 ASP 93 -3.836 9.561 18.999 1.00 0.00 O ATOM 1464 OD2 ASP 93 -5.004 11.242 18.449 1.00 0.00 O ATOM 1469 N ALA 94 -4.191 8.072 14.116 1.00 0.00 N ATOM 1470 CA ALA 94 -4.610 7.359 12.916 1.00 0.00 C ATOM 1471 C ALA 94 -3.884 6.027 12.785 1.00 0.00 C ATOM 1472 O ALA 94 -4.482 5.015 12.420 1.00 0.00 O ATOM 1473 CB ALA 94 -4.376 8.218 11.681 1.00 0.00 C ATOM 1479 N ILE 95 -2.589 6.033 13.084 1.00 0.00 N ATOM 1480 CA ILE 95 -1.790 4.813 13.055 1.00 0.00 C ATOM 1481 C ILE 95 -2.257 3.824 14.115 1.00 0.00 C ATOM 1482 O ILE 95 -2.344 2.622 13.861 1.00 0.00 O ATOM 1483 CB ILE 95 -0.295 5.112 13.268 1.00 0.00 C ATOM 1484 CG1 ILE 95 0.273 5.874 12.069 1.00 0.00 C ATOM 1485 CG2 ILE 95 0.477 3.821 13.496 1.00 0.00 C ATOM 1486 CD1 ILE 95 1.640 6.472 12.316 1.00 0.00 C ATOM 1498 N THR 96 -2.556 4.336 15.304 1.00 0.00 N ATOM 1499 CA THR 96 -3.061 3.505 16.390 1.00 0.00 C ATOM 1500 C THR 96 -4.360 2.814 15.996 1.00 0.00 C ATOM 1501 O THR 96 -4.519 1.609 16.194 1.00 0.00 O ATOM 1502 CB THR 96 -3.297 4.330 17.669 1.00 0.00 C ATOM 1503 OG1 THR 96 -2.049 4.858 18.137 1.00 0.00 O ATOM 1504 CG2 THR 96 -3.915 3.463 18.755 1.00 0.00 C ATOM 1512 N GLU 97 -5.288 3.584 15.439 1.00 0.00 N ATOM 1513 CA GLU 97 -6.580 3.050 15.026 1.00 0.00 C ATOM 1514 C GLU 97 -6.420 2.006 13.929 1.00 0.00 C ATOM 1515 O GLU 97 -7.099 0.979 13.930 1.00 0.00 O ATOM 1516 CB GLU 97 -7.499 4.177 14.548 1.00 0.00 C ATOM 1517 CG GLU 97 -8.012 5.083 15.659 1.00 0.00 C ATOM 1518 CD GLU 97 -8.770 6.256 15.101 1.00 0.00 C ATOM 1519 OE1 GLU 97 -8.820 6.390 13.901 1.00 0.00 O ATOM 1520 OE2 GLU 97 -9.391 6.954 15.867 1.00 0.00 O ATOM 1527 N ARG 98 -5.517 2.273 12.991 1.00 0.00 N ATOM 1528 CA ARG 98 -5.204 1.320 11.933 1.00 0.00 C ATOM 1529 C ARG 98 -4.699 0.003 12.511 1.00 0.00 C ATOM 1530 O ARG 98 -5.145 -1.072 12.109 1.00 0.00 O ATOM 1531 CB ARG 98 -4.230 1.891 10.914 1.00 0.00 C ATOM 1532 CG ARG 98 -3.839 0.936 9.798 1.00 0.00 C ATOM 1533 CD ARG 98 -2.905 1.513 8.797 1.00 0.00 C ATOM 1534 NE ARG 98 -1.619 1.924 9.339 1.00 0.00 N ATOM 1535 CZ ARG 98 -0.611 1.082 9.637 1.00 0.00 C ATOM 1536 NH1 ARG 98 -0.744 -0.217 9.484 1.00 0.00 H ATOM 1537 NH2 ARG 98 0.512 1.595 10.111 1.00 0.00 H ATOM 1551 N PHE 99 -3.767 0.095 13.452 1.00 0.00 N ATOM 1552 CA PHE 99 -3.208 -1.089 14.096 1.00 0.00 C ATOM 1553 C PHE 99 -4.289 -1.890 14.809 1.00 0.00 C ATOM 1554 O PHE 99 -4.326 -3.117 14.719 1.00 0.00 O ATOM 1555 CB PHE 99 -2.109 -0.693 15.083 1.00 0.00 C ATOM 1556 CG PHE 99 -1.497 -1.858 15.807 1.00 0.00 C ATOM 1557 CD1 PHE 99 -0.466 -2.587 15.233 1.00 0.00 C ATOM 1558 CD2 PHE 99 -1.951 -2.228 17.064 1.00 0.00 C ATOM 1559 CE1 PHE 99 0.097 -3.659 15.899 1.00 0.00 C ATOM 1560 CE2 PHE 99 -1.389 -3.298 17.733 1.00 0.00 C ATOM 1561 CZ PHE 99 -0.364 -4.015 17.149 1.00 0.00 C ATOM 1571 N LEU 100 -5.167 -1.189 15.517 1.00 0.00 N ATOM 1572 CA LEU 100 -6.230 -1.837 16.275 1.00 0.00 C ATOM 1573 C LEU 100 -7.164 -2.619 15.359 1.00 0.00 C ATOM 1574 O LEU 100 -7.543 -3.749 15.661 1.00 0.00 O ATOM 1575 CB LEU 100 -7.018 -0.795 17.080 1.00 0.00 C ATOM 1576 CG LEU 100 -6.260 -0.168 18.255 1.00 0.00 C ATOM 1577 CD1 LEU 100 -7.060 0.992 18.834 1.00 0.00 C ATOM 1578 CD2 LEU 100 -5.999 -1.226 19.316 1.00 0.00 C ATOM 1590 N GLU 101 -7.532 -2.007 14.239 1.00 0.00 N ATOM 1591 CA GLU 101 -8.412 -2.649 13.269 1.00 0.00 C ATOM 1592 C GLU 101 -7.735 -3.848 12.618 1.00 0.00 C ATOM 1593 O GLU 101 -8.376 -4.865 12.353 1.00 0.00 O ATOM 1594 CB GLU 101 -8.851 -1.647 12.199 1.00 0.00 C ATOM 1595 CG GLU 101 -9.802 -0.570 12.697 1.00 0.00 C ATOM 1596 CD GLU 101 -11.040 -1.170 13.302 1.00 0.00 C ATOM 1597 OE1 GLU 101 -11.653 -1.991 12.662 1.00 0.00 O ATOM 1598 OE2 GLU 101 -11.312 -0.894 14.447 1.00 0.00 O ATOM 1605 N GLU 102 -6.437 -3.722 12.364 1.00 0.00 N ATOM 1606 CA GLU 102 -5.650 -4.830 11.836 1.00 0.00 C ATOM 1607 C GLU 102 -5.564 -5.972 12.840 1.00 0.00 C ATOM 1608 O GLU 102 -5.636 -7.144 12.469 1.00 0.00 O ATOM 1609 CB GLU 102 -4.245 -4.355 11.459 1.00 0.00 C ATOM 1610 CG GLU 102 -4.188 -3.485 10.212 1.00 0.00 C ATOM 1611 CD GLU 102 -2.828 -2.871 10.034 1.00 0.00 C ATOM 1612 OE1 GLU 102 -1.981 -3.097 10.866 1.00 0.00 O ATOM 1613 OE2 GLU 102 -2.599 -2.268 9.012 1.00 0.00 O ATOM 1620 N ALA 103 -5.411 -5.625 14.113 1.00 0.00 N ATOM 1621 CA ALA 103 -5.377 -6.619 15.179 1.00 0.00 C ATOM 1622 C ALA 103 -6.697 -7.373 15.272 1.00 0.00 C ATOM 1623 O ALA 103 -6.720 -8.575 15.535 1.00 0.00 O ATOM 1624 CB ALA 103 -5.047 -5.958 16.509 1.00 0.00 C ATOM 1630 N LYS 104 -7.797 -6.658 15.055 1.00 0.00 N ATOM 1631 CA LYS 104 -9.115 -7.278 15.007 1.00 0.00 C ATOM 1632 C LYS 104 -9.216 -8.270 13.855 1.00 0.00 C ATOM 1633 O LYS 104 -9.760 -9.364 14.010 1.00 0.00 O ATOM 1634 CB LYS 104 -10.204 -6.212 14.881 1.00 0.00 C ATOM 1635 CG LYS 104 -10.389 -5.351 16.123 1.00 0.00 C ATOM 1636 CD LYS 104 -11.405 -4.245 15.884 1.00 0.00 C ATOM 1637 CE LYS 104 -11.490 -3.303 17.076 1.00 0.00 C ATOM 1638 NZ LYS 104 -12.421 -2.169 16.824 1.00 0.00 N ATOM 1652 N SER 105 -8.690 -7.882 12.699 1.00 0.00 N ATOM 1653 CA SER 105 -8.691 -8.749 11.527 1.00 0.00 C ATOM 1654 C SER 105 -7.839 -9.989 11.757 1.00 0.00 C ATOM 1655 O SER 105 -8.189 -11.086 11.320 1.00 0.00 O ATOM 1656 CB SER 105 -8.198 -7.986 10.313 1.00 0.00 C ATOM 1657 OG SER 105 -9.074 -6.956 9.946 1.00 0.00 O ATOM 1663 N ILE 106 -6.717 -9.810 12.447 1.00 0.00 N ATOM 1664 CA ILE 106 -5.832 -10.922 12.773 1.00 0.00 C ATOM 1665 C ILE 106 -6.503 -11.899 13.730 1.00 0.00 C ATOM 1666 O ILE 106 -6.447 -13.113 13.532 1.00 0.00 O ATOM 1667 CB ILE 106 -4.512 -10.431 13.396 1.00 0.00 C ATOM 1668 CG1 ILE 106 -3.684 -9.668 12.359 1.00 0.00 C ATOM 1669 CG2 ILE 106 -3.720 -11.602 13.956 1.00 0.00 C ATOM 1670 CD1 ILE 106 -2.536 -8.884 12.952 1.00 0.00 C ATOM 1682 N GLY 107 -7.137 -11.362 14.766 1.00 0.00 N ATOM 1683 CA GLY 107 -7.778 -12.188 15.783 1.00 0.00 C ATOM 1684 C GLY 107 -7.147 -11.964 17.152 1.00 0.00 C ATOM 1685 O GLY 107 -7.234 -12.818 18.033 1.00 0.00 O ATOM 1687 HA2 GLY 107 -8.837 -11.932 15.836 1.00 0.00 H ATOM 1688 HA3 GLY 107 -7.671 -13.237 15.511 1.00 0.00 H ATOM 1689 N LEU 108 -6.511 -10.810 17.322 1.00 0.00 N ATOM 1690 CA LEU 108 -5.822 -10.492 18.567 1.00 0.00 C ATOM 1691 C LEU 108 -6.776 -9.874 19.581 1.00 0.00 C ATOM 1692 O LEU 108 -7.739 -9.199 19.212 1.00 0.00 O ATOM 1693 CB LEU 108 -4.645 -9.545 18.296 1.00 0.00 C ATOM 1694 CG LEU 108 -3.576 -10.091 17.342 1.00 0.00 C ATOM 1695 CD1 LEU 108 -2.525 -9.023 17.069 1.00 0.00 C ATOM 1696 CD2 LEU 108 -2.938 -11.331 17.950 1.00 0.00 C ATOM 1708 N ASP 109 -6.503 -10.105 20.860 1.00 0.00 N ATOM 1709 CA ASP 109 -7.294 -9.511 21.933 1.00 0.00 C ATOM 1710 C ASP 109 -7.042 -8.012 22.037 1.00 0.00 C ATOM 1711 O ASP 109 -5.999 -7.518 21.612 1.00 0.00 O ATOM 1712 CB ASP 109 -6.983 -10.191 23.268 1.00 0.00 C ATOM 1713 CG ASP 109 -7.540 -11.601 23.401 1.00 0.00 C ATOM 1714 OD1 ASP 109 -8.328 -11.989 22.570 1.00 0.00 O ATOM 1715 OD2 ASP 109 -7.061 -12.332 24.235 1.00 0.00 O ATOM 1720 N ASP 110 -8.005 -7.294 22.605 1.00 0.00 N ATOM 1721 CA ASP 110 -7.868 -5.858 22.814 1.00 0.00 C ATOM 1722 C ASP 110 -6.656 -5.541 23.682 1.00 0.00 C ATOM 1723 O ASP 110 -5.890 -4.625 23.385 1.00 0.00 O ATOM 1724 CB ASP 110 -9.135 -5.285 23.453 1.00 0.00 C ATOM 1725 CG ASP 110 -10.332 -5.207 22.515 1.00 0.00 C ATOM 1726 OD1 ASP 110 -10.146 -5.370 21.332 1.00 0.00 O ATOM 1727 OD2 ASP 110 -11.437 -5.142 22.998 1.00 0.00 O ATOM 1732 N GLN 111 -6.488 -6.306 24.755 1.00 0.00 N ATOM 1733 CA GLN 111 -5.359 -6.120 25.659 1.00 0.00 C ATOM 1734 C GLN 111 -4.041 -6.446 24.967 1.00 0.00 C ATOM 1735 O GLN 111 -3.024 -5.794 25.209 1.00 0.00 O ATOM 1736 CB GLN 111 -5.520 -6.997 26.905 1.00 0.00 C ATOM 1737 CG GLN 111 -6.631 -6.551 27.840 1.00 0.00 C ATOM 1738 CD GLN 111 -6.810 -7.493 29.016 1.00 0.00 C ATOM 1739 OE1 GLN 111 -6.140 -8.525 29.110 1.00 0.00 O ATOM 1740 NE2 GLN 111 -7.720 -7.145 29.918 1.00 0.00 N ATOM 1749 N THR 112 -4.064 -7.458 24.106 1.00 0.00 N ATOM 1750 CA THR 112 -2.887 -7.832 23.333 1.00 0.00 C ATOM 1751 C THR 112 -2.443 -6.695 22.421 1.00 0.00 C ATOM 1752 O THR 112 -1.256 -6.382 22.338 1.00 0.00 O ATOM 1753 CB THR 112 -3.147 -9.089 22.480 1.00 0.00 C ATOM 1754 OG1 THR 112 -3.423 -10.203 23.339 1.00 0.00 O ATOM 1755 CG2 THR 112 -1.937 -9.406 21.616 1.00 0.00 C ATOM 1763 N ALA 113 -3.404 -6.081 21.740 1.00 0.00 N ATOM 1764 CA ALA 113 -3.114 -4.967 20.843 1.00 0.00 C ATOM 1765 C ALA 113 -2.579 -3.766 21.611 1.00 0.00 C ATOM 1766 O ALA 113 -1.673 -3.074 21.148 1.00 0.00 O ATOM 1767 CB ALA 113 -4.358 -4.585 20.055 1.00 0.00 C ATOM 1773 N ILE 114 -3.146 -3.522 22.788 1.00 0.00 N ATOM 1774 CA ILE 114 -2.695 -2.432 23.645 1.00 0.00 C ATOM 1775 C ILE 114 -1.247 -2.632 24.074 1.00 0.00 C ATOM 1776 O ILE 114 -0.446 -1.698 24.043 1.00 0.00 O ATOM 1777 CB ILE 114 -3.579 -2.296 24.899 1.00 0.00 C ATOM 1778 CG1 ILE 114 -4.975 -1.802 24.515 1.00 0.00 C ATOM 1779 CG2 ILE 114 -2.934 -1.354 25.904 1.00 0.00 C ATOM 1780 CD1 ILE 114 -5.993 -1.928 25.626 1.00 0.00 C ATOM 1792 N GLU 115 -0.917 -3.854 24.475 1.00 0.00 N ATOM 1793 CA GLU 115 0.438 -4.180 24.905 1.00 0.00 C ATOM 1794 C GLU 115 1.428 -4.046 23.756 1.00 0.00 C ATOM 1795 O GLU 115 2.552 -3.580 23.945 1.00 0.00 O ATOM 1796 CB GLU 115 0.491 -5.597 25.482 1.00 0.00 C ATOM 1797 CG GLU 115 -0.173 -5.747 26.843 1.00 0.00 C ATOM 1798 CD GLU 115 -0.226 -7.188 27.269 1.00 0.00 C ATOM 1799 OE1 GLU 115 0.174 -8.030 26.501 1.00 0.00 O ATOM 1800 OE2 GLU 115 -0.559 -7.440 28.403 1.00 0.00 O ATOM 1807 N LEU 116 1.005 -4.457 22.566 1.00 0.00 N ATOM 1808 CA LEU 116 1.834 -4.330 21.372 1.00 0.00 C ATOM 1809 C LEU 116 2.073 -2.868 21.021 1.00 0.00 C ATOM 1810 O LEU 116 3.164 -2.493 20.589 1.00 0.00 O ATOM 1811 CB LEU 116 1.182 -5.062 20.193 1.00 0.00 C ATOM 1812 CG LEU 116 1.177 -6.592 20.296 1.00 0.00 C ATOM 1813 CD1 LEU 116 0.307 -7.187 19.197 1.00 0.00 C ATOM 1814 CD2 LEU 116 2.603 -7.113 20.198 1.00 0.00 C ATOM 1826 N LEU 117 1.049 -2.043 21.211 1.00 0.00 N ATOM 1827 CA LEU 117 1.174 -0.605 21.007 1.00 0.00 C ATOM 1828 C LEU 117 2.146 0.011 22.006 1.00 0.00 C ATOM 1829 O LEU 117 2.913 0.912 21.665 1.00 0.00 O ATOM 1830 CB LEU 117 -0.201 0.067 21.115 1.00 0.00 C ATOM 1831 CG LEU 117 -1.145 -0.184 19.933 1.00 0.00 C ATOM 1832 CD1 LEU 117 -2.558 0.259 20.290 1.00 0.00 C ATOM 1833 CD2 LEU 117 -0.639 0.563 18.708 1.00 0.00 C ATOM 1845 N ILE 118 2.110 -0.481 23.239 1.00 0.00 N ATOM 1846 CA ILE 118 3.050 -0.048 24.265 1.00 0.00 C ATOM 1847 C ILE 118 4.477 -0.447 23.908 1.00 0.00 C ATOM 1848 O ILE 118 5.416 0.323 24.113 1.00 0.00 O ATOM 1849 CB ILE 118 2.693 -0.633 25.644 1.00 0.00 C ATOM 1850 CG1 ILE 118 1.386 -0.026 26.159 1.00 0.00 C ATOM 1851 CG2 ILE 118 3.822 -0.390 26.633 1.00 0.00 C ATOM 1852 CD1 ILE 118 0.804 -0.749 27.351 1.00 0.00 C ATOM 1864 N LYS 119 4.633 -1.654 23.376 1.00 0.00 N ATOM 1865 CA LYS 119 5.939 -2.140 22.949 1.00 0.00 C ATOM 1866 C LYS 119 6.504 -1.286 21.821 1.00 0.00 C ATOM 1867 O LYS 119 7.709 -1.041 21.757 1.00 0.00 O ATOM 1868 CB LYS 119 5.849 -3.601 22.508 1.00 0.00 C ATOM 1869 CG LYS 119 5.652 -4.591 23.648 1.00 0.00 C ATOM 1870 CD LYS 119 5.510 -6.013 23.128 1.00 0.00 C ATOM 1871 CE LYS 119 5.272 -6.998 24.263 1.00 0.00 C ATOM 1872 NZ LYS 119 5.134 -8.395 23.769 1.00 0.00 N ATOM 1886 N ARG 120 5.626 -0.836 20.930 1.00 0.00 N ATOM 1887 CA ARG 120 6.020 0.062 19.852 1.00 0.00 C ATOM 1888 C ARG 120 6.423 1.428 20.392 1.00 0.00 C ATOM 1889 O ARG 120 7.446 1.987 19.994 1.00 0.00 O ATOM 1890 CB ARG 120 4.944 0.182 18.783 1.00 0.00 C ATOM 1891 CG ARG 120 4.806 -1.031 17.876 1.00 0.00 C ATOM 1892 CD ARG 120 3.832 -0.859 16.768 1.00 0.00 C ATOM 1893 NE ARG 120 3.793 -1.964 15.823 1.00 0.00 N ATOM 1894 CZ ARG 120 3.115 -1.951 14.659 1.00 0.00 C ATOM 1895 NH1 ARG 120 2.389 -0.912 14.310 1.00 0.00 H ATOM 1896 NH2 ARG 120 3.180 -3.023 13.887 1.00 0.00 H ATOM 1910 N SER 121 5.614 1.961 21.301 1.00 0.00 N ATOM 1911 CA SER 121 5.895 3.256 21.911 1.00 0.00 C ATOM 1912 C SER 121 5.236 3.376 23.279 1.00 0.00 C ATOM 1913 O SER 121 4.009 3.379 23.388 1.00 0.00 O ATOM 1914 CB SER 121 5.428 4.373 20.999 1.00 0.00 C ATOM 1915 OG SER 121 5.644 5.638 21.563 1.00 0.00 O ATOM 1921 N ARG 122 6.056 3.474 24.318 1.00 0.00 N ATOM 1922 CA ARG 122 5.553 3.588 25.683 1.00 0.00 C ATOM 1923 C ARG 122 5.599 5.030 26.169 1.00 0.00 C ATOM 1924 O ARG 122 4.740 5.801 25.840 1.00 0.00 O ATOM 1925 OXT ARG 122 6.493 5.396 26.880 1.00 0.00 O ATOM 1926 CB ARG 122 6.278 2.655 26.641 1.00 0.00 C ATOM 1927 CG ARG 122 5.738 2.652 28.063 1.00 0.00 C ATOM 1928 CD ARG 122 6.424 1.702 28.976 1.00 0.00 C ATOM 1929 NE ARG 122 5.885 1.670 30.326 1.00 0.00 N ATOM 1930 CZ ARG 122 6.436 0.995 31.354 1.00 0.00 C ATOM 1931 NH1 ARG 122 7.517 0.267 31.184 1.00 0.00 H ATOM 1932 NH2 ARG 122 5.848 1.067 32.535 1.00 0.00 H TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 305 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 24.05 91.9 74 97.4 76 ARMSMC SECONDARY STRUCTURE . . 23.01 96.9 64 100.0 64 ARMSMC SURFACE . . . . . . . . 24.68 91.4 70 97.2 72 ARMSMC BURIED . . . . . . . . 6.90 100.0 4 100.0 4 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 82.95 48.5 33 97.1 34 ARMSSC1 RELIABLE SIDE CHAINS . 82.95 48.5 33 97.1 34 ARMSSC1 SECONDARY STRUCTURE . . 76.78 53.6 28 100.0 28 ARMSSC1 SURFACE . . . . . . . . 82.95 48.5 33 97.1 34 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 45.80 79.3 29 96.7 30 ARMSSC2 RELIABLE SIDE CHAINS . 32.68 87.0 23 100.0 23 ARMSSC2 SECONDARY STRUCTURE . . 42.01 83.3 24 100.0 24 ARMSSC2 SURFACE . . . . . . . . 45.80 79.3 29 96.7 30 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 61.45 64.3 14 100.0 14 ARMSSC3 RELIABLE SIDE CHAINS . 54.39 66.7 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 63.77 61.5 13 100.0 13 ARMSSC3 SURFACE . . . . . . . . 61.45 64.3 14 100.0 14 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 97.28 42.9 7 100.0 7 ARMSSC4 RELIABLE SIDE CHAINS . 97.28 42.9 7 100.0 7 ARMSSC4 SECONDARY STRUCTURE . . 105.02 33.3 6 100.0 6 ARMSSC4 SURFACE . . . . . . . . 97.28 42.9 7 100.0 7 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 2.38 (Number of atoms: 38) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 2.38 38 97.4 39 CRMSCA CRN = ALL/NP . . . . . 0.0625 CRMSCA SECONDARY STRUCTURE . . 2.16 32 100.0 32 CRMSCA SURFACE . . . . . . . . 2.43 36 97.3 37 CRMSCA BURIED . . . . . . . . 0.98 2 100.0 2 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 2.56 189 97.4 194 CRMSMC SECONDARY STRUCTURE . . 2.26 160 100.0 160 CRMSMC SURFACE . . . . . . . . 2.62 179 97.3 184 CRMSMC BURIED . . . . . . . . 1.11 10 100.0 10 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 3.16 153 97.5 157 CRMSSC RELIABLE SIDE CHAINS . 3.13 137 98.6 139 CRMSSC SECONDARY STRUCTURE . . 3.18 130 100.0 130 CRMSSC SURFACE . . . . . . . . 3.18 151 97.4 155 CRMSSC BURIED . . . . . . . . 1.05 2 100.0 2 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 2.89 305 97.4 313 CRMSALL SECONDARY STRUCTURE . . 2.76 258 100.0 258 CRMSALL SURFACE . . . . . . . . 2.93 295 97.4 303 CRMSALL BURIED . . . . . . . . 1.11 10 100.0 10 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.868 1.000 0.500 38 97.4 39 ERRCA SECONDARY STRUCTURE . . 1.774 1.000 0.500 32 100.0 32 ERRCA SURFACE . . . . . . . . 1.920 1.000 0.500 36 97.3 37 ERRCA BURIED . . . . . . . . 0.943 1.000 0.500 2 100.0 2 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.947 1.000 0.500 189 97.4 194 ERRMC SECONDARY STRUCTURE . . 1.821 1.000 0.500 160 100.0 160 ERRMC SURFACE . . . . . . . . 1.998 1.000 0.500 179 97.3 184 ERRMC BURIED . . . . . . . . 1.024 1.000 0.500 10 100.0 10 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.700 1.000 0.500 153 97.5 157 ERRSC RELIABLE SIDE CHAINS . 2.672 1.000 0.500 137 98.6 139 ERRSC SECONDARY STRUCTURE . . 2.687 1.000 0.500 130 100.0 130 ERRSC SURFACE . . . . . . . . 2.722 1.000 0.500 151 97.4 155 ERRSC BURIED . . . . . . . . 1.017 1.000 0.500 2 100.0 2 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.319 1.000 0.500 305 97.4 313 ERRALL SECONDARY STRUCTURE . . 2.250 1.000 0.500 258 100.0 258 ERRALL SURFACE . . . . . . . . 2.363 1.000 0.500 295 97.4 303 ERRALL BURIED . . . . . . . . 1.024 1.000 0.500 10 100.0 10 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 15 25 31 36 38 38 39 DISTCA CA (P) 38.46 64.10 79.49 92.31 97.44 39 DISTCA CA (RMS) 0.75 1.12 1.47 1.95 2.38 DISTCA ALL (N) 80 158 226 278 304 305 313 DISTALL ALL (P) 25.56 50.48 72.20 88.82 97.12 313 DISTALL ALL (RMS) 0.75 1.17 1.68 2.24 2.82 DISTALL END of the results output