####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 39 ( 313), selected 39 , name T0586TS166_1-D2 # Molecule2: number of CA atoms 39 ( 313), selected 39 , name T0586-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0586TS166_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 39 85 - 123 2.59 2.59 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 30 94 - 123 1.91 3.39 LCS_AVERAGE: 73.96 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 102 - 123 0.92 6.51 LCS_AVERAGE: 55.16 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 39 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT D 85 D 85 19 25 39 8 13 17 19 23 24 24 25 28 36 39 39 39 39 39 39 39 39 39 39 LCS_GDT Q 86 Q 86 21 25 39 8 16 20 23 26 33 36 37 38 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 87 L 87 21 25 39 8 16 20 23 27 32 36 37 38 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 88 K 88 21 25 39 8 16 20 23 23 24 26 35 38 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 89 K 89 21 25 39 8 16 20 23 23 25 31 37 38 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 90 E 90 21 25 39 8 15 20 23 27 33 36 37 38 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 91 L 91 21 25 39 8 16 20 23 27 33 36 37 38 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 92 A 92 21 25 39 8 16 20 23 23 31 36 37 38 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT D 93 D 93 21 25 39 7 16 20 23 23 32 36 37 38 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 94 A 94 21 30 39 9 16 20 24 27 33 36 37 38 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 95 I 95 21 30 39 7 16 20 23 27 33 36 37 38 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT T 96 T 96 21 30 39 9 16 20 23 23 33 36 37 38 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 97 E 97 21 30 39 9 16 20 23 25 33 36 37 38 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT R 98 R 98 21 30 39 10 17 20 24 27 33 36 37 38 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT F 99 F 99 21 30 39 9 16 20 23 27 33 36 37 38 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 100 L 100 21 30 39 9 16 20 23 27 33 36 37 38 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 101 E 101 21 30 39 9 15 20 24 27 33 36 37 38 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 102 E 102 22 30 39 8 17 20 24 27 33 36 37 38 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 103 A 103 22 30 39 9 16 20 24 27 33 36 37 38 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 104 K 104 22 30 39 9 15 20 24 27 33 36 37 38 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT S 105 S 105 22 30 39 7 14 20 23 25 33 36 37 38 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 106 I 106 22 30 39 6 14 20 24 27 33 36 37 38 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT G 107 G 107 22 30 39 6 17 20 24 27 33 36 37 38 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 108 L 108 22 30 39 14 17 20 24 27 33 36 37 38 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT D 109 D 109 22 30 39 6 17 20 24 27 33 36 37 38 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT D 110 D 110 22 30 39 14 17 20 24 27 33 36 37 38 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT Q 111 Q 111 22 30 39 14 17 20 24 27 33 36 37 38 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT T 112 T 112 22 30 39 14 17 20 24 27 33 36 37 38 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 113 A 113 22 30 39 14 17 20 24 27 33 36 37 38 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 114 I 114 22 30 39 14 17 20 24 27 33 36 37 38 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 115 E 115 22 30 39 14 17 20 24 27 33 36 37 38 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 116 L 116 22 30 39 11 17 20 24 27 33 36 37 38 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 117 L 117 22 30 39 14 17 20 24 27 33 36 37 38 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 118 I 118 22 30 39 14 17 20 24 27 33 36 37 38 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 119 K 119 22 30 39 14 17 20 24 27 33 36 37 38 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT R 120 R 120 22 30 39 14 17 20 24 27 33 36 37 38 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT S 121 S 121 22 30 39 14 17 20 24 27 33 36 37 38 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT R 122 R 122 22 30 39 14 17 20 24 27 33 36 37 38 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT N 123 N 123 22 30 39 14 17 20 24 27 33 36 37 38 38 39 39 39 39 39 39 39 39 39 39 LCS_AVERAGE LCS_A: 76.38 ( 55.16 73.96 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 14 17 20 24 27 33 36 37 38 38 39 39 39 39 39 39 39 39 39 39 GDT PERCENT_AT 35.90 43.59 51.28 61.54 69.23 84.62 92.31 94.87 97.44 97.44 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.32 0.44 0.73 1.22 1.54 2.09 2.24 2.34 2.44 2.44 2.59 2.59 2.59 2.59 2.59 2.59 2.59 2.59 2.59 2.59 GDT RMS_ALL_AT 6.37 6.34 5.51 4.67 3.31 2.83 2.72 2.66 2.62 2.62 2.59 2.59 2.59 2.59 2.59 2.59 2.59 2.59 2.59 2.59 # Checking swapping # possible swapping detected: D 85 D 85 # possible swapping detected: F 99 F 99 # possible swapping detected: E 115 E 115 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA D 85 D 85 6.826 0 0.040 0.242 10.672 19.762 10.833 LGA Q 86 Q 86 2.426 0 0.047 0.597 6.493 70.000 53.862 LGA L 87 L 87 2.882 0 0.042 0.984 9.061 59.286 38.690 LGA K 88 K 88 5.112 0 0.030 1.051 13.308 34.405 17.460 LGA K 89 K 89 4.539 0 0.032 0.805 12.148 42.024 21.640 LGA E 90 E 90 2.338 0 0.048 0.402 6.869 70.952 47.460 LGA L 91 L 91 2.353 0 0.036 1.414 7.570 70.952 51.131 LGA A 92 A 92 3.438 0 0.048 0.053 4.907 57.262 52.095 LGA D 93 D 93 3.315 0 0.061 0.269 6.181 57.262 40.833 LGA A 94 A 94 2.194 0 0.039 0.041 3.005 68.810 65.048 LGA I 95 I 95 2.191 0 0.030 1.246 6.238 72.976 57.560 LGA T 96 T 96 2.783 0 0.041 1.154 5.901 62.976 53.605 LGA E 97 E 97 3.071 0 0.046 0.679 6.583 59.167 39.577 LGA R 98 R 98 2.282 0 0.042 1.275 9.629 68.810 36.970 LGA F 99 F 99 1.842 0 0.056 1.445 10.831 81.548 38.615 LGA L 100 L 100 2.429 0 0.091 0.954 3.911 66.786 62.381 LGA E 101 E 101 2.821 0 0.027 1.081 3.895 60.952 52.646 LGA E 102 E 102 2.383 0 0.030 0.461 4.183 68.810 55.503 LGA A 103 A 103 1.284 0 0.040 0.057 1.979 88.214 85.143 LGA K 104 K 104 1.650 0 0.035 1.034 5.903 77.262 53.915 LGA S 105 S 105 2.712 0 0.097 0.708 5.825 59.286 51.429 LGA I 106 I 106 2.393 0 0.230 1.344 4.926 63.095 56.131 LGA G 107 G 107 1.012 0 0.088 0.088 1.309 81.429 81.429 LGA L 108 L 108 1.380 0 0.111 1.380 4.689 79.286 65.774 LGA D 109 D 109 2.751 0 0.034 0.996 5.293 64.881 51.964 LGA D 110 D 110 2.874 0 0.034 1.155 4.794 59.048 50.536 LGA Q 111 Q 111 3.167 0 0.037 1.176 4.329 55.476 57.196 LGA T 112 T 112 1.962 0 0.029 1.033 4.454 77.381 69.184 LGA A 113 A 113 0.667 0 0.034 0.037 1.034 85.952 86.857 LGA I 114 I 114 1.970 0 0.038 0.650 3.202 72.857 66.071 LGA E 115 E 115 1.751 0 0.058 0.727 4.167 81.667 64.339 LGA L 116 L 116 0.896 0 0.057 0.376 2.091 88.214 81.667 LGA L 117 L 117 1.574 0 0.013 1.026 4.508 75.000 66.726 LGA I 118 I 118 1.481 0 0.032 0.050 2.541 81.429 74.167 LGA K 119 K 119 0.560 0 0.032 0.903 4.510 85.952 73.704 LGA R 120 R 120 1.909 0 0.051 1.589 9.669 70.952 43.333 LGA S 121 S 121 2.362 0 0.055 0.719 3.266 64.762 61.032 LGA R 122 R 122 1.571 0 0.177 1.300 7.715 70.833 52.684 LGA N 123 N 123 2.108 0 0.213 1.150 5.852 47.619 56.310 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 39 156 156 100.00 313 313 100.00 39 SUMMARY(RMSD_GDC): 2.593 2.363 4.007 67.265 55.013 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 39 39 4.0 37 2.34 75.000 78.793 1.515 LGA_LOCAL RMSD: 2.342 Number of atoms: 37 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.659 Number of assigned atoms: 39 Std_ASGN_ATOMS RMSD: 2.593 Standard rmsd on all 39 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.909721 * X + 0.004723 * Y + -0.415192 * Z + -45.573952 Y_new = -0.279488 * X + 0.746461 * Y + -0.603889 * Z + -64.417297 Z_new = 0.307073 * X + 0.665412 * Y + 0.680392 * Z + -52.468239 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.298070 -0.312115 0.774268 [DEG: -17.0782 -17.8829 44.3623 ] ZXZ: -0.602308 0.822499 0.432357 [DEG: -34.5097 47.1257 24.7723 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0586TS166_1-D2 REMARK 2: T0586-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0586TS166_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 39 39 4.0 37 2.34 78.793 2.59 REMARK ---------------------------------------------------------- MOLECULE T0586TS166_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0586 REMARK MODEL 1 REMARK PARENT 3by6E ATOM 668 N ASP 85 -0.317 20.697 9.500 1.00 0.00 N ATOM 669 CA ASP 85 0.754 19.846 9.948 1.00 0.00 C ATOM 670 C ASP 85 0.406 19.218 11.274 1.00 0.00 C ATOM 671 O ASP 85 0.630 18.026 11.486 1.00 0.00 O ATOM 672 CB ASP 85 2.039 20.656 10.156 1.00 0.00 C ATOM 673 CG ASP 85 2.369 21.351 8.842 1.00 0.00 C ATOM 674 OD1 ASP 85 2.043 20.789 7.764 1.00 0.00 O ATOM 675 OD2 ASP 85 2.940 22.472 8.903 1.00 0.00 O ATOM 676 N GLN 86 -0.167 20.015 12.198 1.00 0.00 N ATOM 677 CA GLN 86 -0.498 19.583 13.533 1.00 0.00 C ATOM 678 C GLN 86 -1.525 18.511 13.455 1.00 0.00 C ATOM 679 O GLN 86 -1.484 17.544 14.210 1.00 0.00 O ATOM 680 CB GLN 86 -1.114 20.707 14.390 1.00 0.00 C ATOM 681 CG GLN 86 -1.546 20.276 15.797 1.00 0.00 C ATOM 682 CD GLN 86 -0.438 20.581 16.803 1.00 0.00 C ATOM 683 OE1 GLN 86 0.696 20.121 16.680 1.00 0.00 O ATOM 684 NE2 GLN 86 -0.783 21.389 17.846 1.00 0.00 N ATOM 685 N LEU 87 -2.496 18.689 12.547 1.00 0.00 N ATOM 686 CA LEU 87 -3.558 17.751 12.368 1.00 0.00 C ATOM 687 C LEU 87 -2.968 16.484 11.824 1.00 0.00 C ATOM 688 O LEU 87 -3.384 15.397 12.213 1.00 0.00 O ATOM 689 CB LEU 87 -4.602 18.273 11.359 1.00 0.00 C ATOM 690 CG LEU 87 -5.923 17.475 11.296 1.00 0.00 C ATOM 691 CD1 LEU 87 -5.708 16.024 10.837 1.00 0.00 C ATOM 692 CD2 LEU 87 -6.701 17.597 12.616 1.00 0.00 C ATOM 693 N LYS 88 -1.990 16.595 10.891 1.00 0.00 N ATOM 694 CA LYS 88 -1.402 15.439 10.258 1.00 0.00 C ATOM 695 C LYS 88 -0.641 14.625 11.249 1.00 0.00 C ATOM 696 O LYS 88 -0.784 13.406 11.282 1.00 0.00 O ATOM 697 CB LYS 88 -0.393 15.751 9.139 1.00 0.00 C ATOM 698 CG LYS 88 -0.080 14.558 8.213 1.00 0.00 C ATOM 699 CD LYS 88 0.507 13.306 8.868 1.00 0.00 C ATOM 700 CE LYS 88 0.870 12.208 7.856 1.00 0.00 C ATOM 701 NZ LYS 88 -0.349 11.677 7.201 1.00 0.00 N ATOM 702 N LYS 89 0.186 15.268 12.095 1.00 0.00 N ATOM 703 CA LYS 89 0.978 14.502 13.016 1.00 0.00 C ATOM 704 C LYS 89 0.052 13.735 13.909 1.00 0.00 C ATOM 705 O LYS 89 0.292 12.567 14.212 1.00 0.00 O ATOM 706 CB LYS 89 1.869 15.349 13.946 1.00 0.00 C ATOM 707 CG LYS 89 3.074 16.020 13.277 1.00 0.00 C ATOM 708 CD LYS 89 3.828 16.942 14.241 1.00 0.00 C ATOM 709 CE LYS 89 5.035 17.663 13.641 1.00 0.00 C ATOM 710 NZ LYS 89 4.765 19.117 13.573 1.00 0.00 N ATOM 711 N GLU 90 -1.038 14.380 14.358 1.00 0.00 N ATOM 712 CA GLU 90 -1.975 13.736 15.232 1.00 0.00 C ATOM 713 C GLU 90 -2.636 12.627 14.482 1.00 0.00 C ATOM 714 O GLU 90 -2.982 11.597 15.057 1.00 0.00 O ATOM 715 CB GLU 90 -3.069 14.674 15.770 1.00 0.00 C ATOM 716 CG GLU 90 -2.535 15.680 16.792 1.00 0.00 C ATOM 717 CD GLU 90 -3.721 16.388 17.425 1.00 0.00 C ATOM 718 OE1 GLU 90 -4.695 15.685 17.804 1.00 0.00 O ATOM 719 OE2 GLU 90 -3.671 17.644 17.535 1.00 0.00 O ATOM 720 N LEU 91 -2.831 12.831 13.169 1.00 0.00 N ATOM 721 CA LEU 91 -3.456 11.895 12.286 1.00 0.00 C ATOM 722 C LEU 91 -2.605 10.664 12.252 1.00 0.00 C ATOM 723 O LEU 91 -3.116 9.548 12.237 1.00 0.00 O ATOM 724 CB LEU 91 -3.539 12.479 10.866 1.00 0.00 C ATOM 725 CG LEU 91 -4.266 11.607 9.834 1.00 0.00 C ATOM 726 CD1 LEU 91 -5.751 11.437 10.199 1.00 0.00 C ATOM 727 CD2 LEU 91 -4.063 12.173 8.419 1.00 0.00 C ATOM 728 N ALA 92 -1.271 10.841 12.244 1.00 0.00 N ATOM 729 CA ALA 92 -0.370 9.726 12.253 1.00 0.00 C ATOM 730 C ALA 92 -0.639 8.981 13.524 1.00 0.00 C ATOM 731 O ALA 92 -0.650 7.751 13.549 1.00 0.00 O ATOM 732 CB ALA 92 1.108 10.154 12.259 1.00 0.00 C ATOM 733 N ASP 93 -0.885 9.717 14.622 1.00 0.00 N ATOM 734 CA ASP 93 -1.187 9.075 15.865 1.00 0.00 C ATOM 735 C ASP 93 -2.429 8.287 15.635 1.00 0.00 C ATOM 736 O ASP 93 -2.579 7.176 16.139 1.00 0.00 O ATOM 737 CB ASP 93 -1.529 10.062 16.998 1.00 0.00 C ATOM 738 CG ASP 93 -0.281 10.832 17.404 1.00 0.00 C ATOM 739 OD1 ASP 93 0.762 10.671 16.713 1.00 0.00 O ATOM 740 OD2 ASP 93 -0.351 11.581 18.415 1.00 0.00 O ATOM 741 N ALA 94 -3.360 8.870 14.860 1.00 0.00 N ATOM 742 CA ALA 94 -4.624 8.268 14.570 1.00 0.00 C ATOM 743 C ALA 94 -4.416 6.987 13.821 1.00 0.00 C ATOM 744 O ALA 94 -5.062 5.986 14.124 1.00 0.00 O ATOM 745 CB ALA 94 -5.511 9.174 13.693 1.00 0.00 C ATOM 746 N ILE 95 -3.502 6.975 12.829 1.00 0.00 N ATOM 747 CA ILE 95 -3.323 5.792 12.037 1.00 0.00 C ATOM 748 C ILE 95 -2.823 4.673 12.895 1.00 0.00 C ATOM 749 O ILE 95 -3.260 3.537 12.734 1.00 0.00 O ATOM 750 CB ILE 95 -2.413 5.955 10.846 1.00 0.00 C ATOM 751 CG1 ILE 95 -0.974 6.296 11.255 1.00 0.00 C ATOM 752 CG2 ILE 95 -3.061 6.984 9.899 1.00 0.00 C ATOM 753 CD1 ILE 95 0.023 6.196 10.099 1.00 0.00 C ATOM 754 N THR 96 -1.900 4.937 13.841 1.00 0.00 N ATOM 755 CA THR 96 -1.400 3.845 14.631 1.00 0.00 C ATOM 756 C THR 96 -2.525 3.226 15.413 1.00 0.00 C ATOM 757 O THR 96 -2.628 2.001 15.488 1.00 0.00 O ATOM 758 CB THR 96 -0.289 4.222 15.569 1.00 0.00 C ATOM 759 OG1 THR 96 0.284 3.052 16.141 1.00 0.00 O ATOM 760 CG2 THR 96 -0.832 5.136 16.673 1.00 0.00 C ATOM 761 N GLU 97 -3.425 4.048 15.989 1.00 0.00 N ATOM 762 CA GLU 97 -4.502 3.497 16.769 1.00 0.00 C ATOM 763 C GLU 97 -5.322 2.642 15.859 1.00 0.00 C ATOM 764 O GLU 97 -5.769 1.559 16.240 1.00 0.00 O ATOM 765 CB GLU 97 -5.440 4.569 17.370 1.00 0.00 C ATOM 766 CG GLU 97 -6.431 4.033 18.411 1.00 0.00 C ATOM 767 CD GLU 97 -7.348 5.175 18.844 1.00 0.00 C ATOM 768 OE1 GLU 97 -7.880 5.864 17.934 1.00 0.00 O ATOM 769 OE2 GLU 97 -7.534 5.364 20.075 1.00 0.00 O ATOM 770 N ARG 98 -5.529 3.116 14.618 1.00 0.00 N ATOM 771 CA ARG 98 -6.330 2.415 13.661 1.00 0.00 C ATOM 772 C ARG 98 -5.692 1.106 13.317 1.00 0.00 C ATOM 773 O ARG 98 -6.397 0.116 13.149 1.00 0.00 O ATOM 774 CB ARG 98 -6.564 3.218 12.378 1.00 0.00 C ATOM 775 CG ARG 98 -7.535 4.376 12.622 1.00 0.00 C ATOM 776 CD ARG 98 -7.816 5.234 11.390 1.00 0.00 C ATOM 777 NE ARG 98 -8.805 6.270 11.799 1.00 0.00 N ATOM 778 CZ ARG 98 -10.086 6.232 11.326 1.00 0.00 C ATOM 779 NH1 ARG 98 -10.448 5.305 10.390 1.00 0.00 H ATOM 780 NH2 ARG 98 -11.006 7.129 11.784 1.00 0.00 H ATOM 781 N PHE 99 -4.353 1.049 13.189 1.00 0.00 N ATOM 782 CA PHE 99 -3.708 -0.200 12.882 1.00 0.00 C ATOM 783 C PHE 99 -3.924 -1.148 14.011 1.00 0.00 C ATOM 784 O PHE 99 -4.147 -2.338 13.798 1.00 0.00 O ATOM 785 CB PHE 99 -2.206 -0.067 12.580 1.00 0.00 C ATOM 786 CG PHE 99 -2.171 0.415 11.173 1.00 0.00 C ATOM 787 CD1 PHE 99 -2.350 1.744 10.872 1.00 0.00 C ATOM 788 CD2 PHE 99 -1.984 -0.483 10.149 1.00 0.00 C ATOM 789 CE1 PHE 99 -2.329 2.176 9.568 1.00 0.00 C ATOM 790 CE2 PHE 99 -1.962 -0.061 8.843 1.00 0.00 C ATOM 791 CZ PHE 99 -2.135 1.272 8.552 1.00 0.00 C ATOM 792 N LEU 100 -3.867 -0.641 15.253 1.00 0.00 N ATOM 793 CA LEU 100 -4.097 -1.448 16.412 1.00 0.00 C ATOM 794 C LEU 100 -5.499 -1.964 16.273 1.00 0.00 C ATOM 795 O LEU 100 -5.758 -3.144 16.495 1.00 0.00 O ATOM 796 CB LEU 100 -3.981 -0.576 17.690 1.00 0.00 C ATOM 797 CG LEU 100 -4.079 -1.280 19.064 1.00 0.00 C ATOM 798 CD1 LEU 100 -3.942 -0.257 20.207 1.00 0.00 C ATOM 799 CD2 LEU 100 -5.348 -2.132 19.207 1.00 0.00 C ATOM 800 N GLU 101 -6.426 -1.081 15.861 1.00 0.00 N ATOM 801 CA GLU 101 -7.819 -1.409 15.729 1.00 0.00 C ATOM 802 C GLU 101 -8.019 -2.452 14.666 1.00 0.00 C ATOM 803 O GLU 101 -8.760 -3.412 14.864 1.00 0.00 O ATOM 804 CB GLU 101 -8.663 -0.179 15.360 1.00 0.00 C ATOM 805 CG GLU 101 -10.165 -0.460 15.317 1.00 0.00 C ATOM 806 CD GLU 101 -10.870 0.836 14.951 1.00 0.00 C ATOM 807 OE1 GLU 101 -10.183 1.893 14.902 1.00 0.00 O ATOM 808 OE2 GLU 101 -12.109 0.793 14.724 1.00 0.00 O ATOM 809 N GLU 102 -7.337 -2.290 13.516 1.00 0.00 N ATOM 810 CA GLU 102 -7.440 -3.135 12.362 1.00 0.00 C ATOM 811 C GLU 102 -6.945 -4.490 12.722 1.00 0.00 C ATOM 812 O GLU 102 -7.459 -5.495 12.232 1.00 0.00 O ATOM 813 CB GLU 102 -6.563 -2.641 11.198 1.00 0.00 C ATOM 814 CG GLU 102 -6.677 -3.508 9.941 1.00 0.00 C ATOM 815 CD GLU 102 -5.766 -2.922 8.875 1.00 0.00 C ATOM 816 OE1 GLU 102 -5.768 -1.671 8.710 1.00 0.00 O ATOM 817 OE2 GLU 102 -5.039 -3.719 8.224 1.00 0.00 O ATOM 818 N ALA 103 -5.906 -4.539 13.574 1.00 0.00 N ATOM 819 CA ALA 103 -5.311 -5.776 13.970 1.00 0.00 C ATOM 820 C ALA 103 -6.350 -6.586 14.666 1.00 0.00 C ATOM 821 O ALA 103 -6.449 -7.790 14.458 1.00 0.00 O ATOM 822 CB ALA 103 -4.133 -5.589 14.940 1.00 0.00 C ATOM 823 N LYS 104 -7.173 -5.952 15.515 1.00 0.00 N ATOM 824 CA LYS 104 -8.182 -6.698 16.204 1.00 0.00 C ATOM 825 C LYS 104 -9.134 -7.268 15.204 1.00 0.00 C ATOM 826 O LYS 104 -9.665 -8.359 15.401 1.00 0.00 O ATOM 827 CB LYS 104 -9.020 -5.859 17.179 1.00 0.00 C ATOM 828 CG LYS 104 -10.151 -6.692 17.783 1.00 0.00 C ATOM 829 CD LYS 104 -9.665 -7.800 18.718 1.00 0.00 C ATOM 830 CE LYS 104 -10.618 -8.993 18.777 1.00 0.00 C ATOM 831 NZ LYS 104 -12.018 -8.525 18.778 1.00 0.00 N ATOM 832 N SER 105 -9.399 -6.529 14.113 1.00 0.00 N ATOM 833 CA SER 105 -10.343 -6.977 13.127 1.00 0.00 C ATOM 834 C SER 105 -9.848 -8.225 12.463 1.00 0.00 C ATOM 835 O SER 105 -10.640 -9.118 12.147 1.00 0.00 O ATOM 836 CB SER 105 -10.615 -5.924 12.038 1.00 0.00 C ATOM 837 OG SER 105 -11.264 -4.801 12.621 1.00 0.00 O ATOM 838 N ILE 106 -8.519 -8.335 12.244 1.00 0.00 N ATOM 839 CA ILE 106 -7.957 -9.491 11.611 1.00 0.00 C ATOM 840 C ILE 106 -8.232 -10.629 12.522 1.00 0.00 C ATOM 841 O ILE 106 -8.393 -11.768 12.086 1.00 0.00 O ATOM 842 CB ILE 106 -6.465 -9.442 11.381 1.00 0.00 C ATOM 843 CG1 ILE 106 -6.109 -10.442 10.271 1.00 0.00 C ATOM 844 CG2 ILE 106 -5.756 -9.765 12.704 1.00 0.00 C ATOM 845 CD1 ILE 106 -4.728 -10.213 9.657 1.00 0.00 C ATOM 846 N GLY 107 -8.298 -10.322 13.833 1.00 0.00 N ATOM 847 CA GLY 107 -8.569 -11.306 14.825 1.00 0.00 C ATOM 848 C GLY 107 -7.508 -11.323 15.882 1.00 0.00 C ATOM 849 O GLY 107 -7.545 -12.177 16.762 1.00 0.00 O ATOM 850 N LEU 108 -6.538 -10.401 15.839 1.00 0.00 N ATOM 851 CA LEU 108 -5.533 -10.416 16.867 1.00 0.00 C ATOM 852 C LEU 108 -6.243 -10.119 18.160 1.00 0.00 C ATOM 853 O LEU 108 -7.035 -9.183 18.240 1.00 0.00 O ATOM 854 CB LEU 108 -4.459 -9.338 16.644 1.00 0.00 C ATOM 855 CG LEU 108 -3.845 -9.393 15.231 1.00 0.00 C ATOM 856 CD1 LEU 108 -2.751 -8.329 15.059 1.00 0.00 C ATOM 857 CD2 LEU 108 -3.385 -10.807 14.849 1.00 0.00 C ATOM 858 N ASP 109 -5.967 -10.910 19.219 1.00 0.00 N ATOM 859 CA ASP 109 -6.678 -10.750 20.459 1.00 0.00 C ATOM 860 C ASP 109 -6.301 -9.466 21.117 1.00 0.00 C ATOM 861 O ASP 109 -5.202 -8.948 20.939 1.00 0.00 O ATOM 862 CB ASP 109 -6.434 -11.861 21.490 1.00 0.00 C ATOM 863 CG ASP 109 -7.177 -13.099 21.029 1.00 0.00 C ATOM 864 OD1 ASP 109 -7.380 -13.242 19.793 1.00 0.00 O ATOM 865 OD2 ASP 109 -7.573 -13.908 21.912 1.00 0.00 O ATOM 866 N ASP 110 -7.249 -8.916 21.903 1.00 0.00 N ATOM 867 CA ASP 110 -7.049 -7.676 22.592 1.00 0.00 C ATOM 868 C ASP 110 -5.997 -7.852 23.637 1.00 0.00 C ATOM 869 O ASP 110 -5.134 -6.994 23.811 1.00 0.00 O ATOM 870 CB ASP 110 -8.326 -7.191 23.296 1.00 0.00 C ATOM 871 CG ASP 110 -8.126 -5.762 23.790 1.00 0.00 C ATOM 872 OD1 ASP 110 -7.105 -5.494 24.483 1.00 0.00 O ATOM 873 OD2 ASP 110 -8.996 -4.911 23.466 1.00 0.00 O ATOM 874 N GLN 111 -6.037 -8.982 24.363 1.00 0.00 N ATOM 875 CA GLN 111 -5.133 -9.178 25.458 1.00 0.00 C ATOM 876 C GLN 111 -3.730 -9.253 24.939 1.00 0.00 C ATOM 877 O GLN 111 -2.815 -8.711 25.557 1.00 0.00 O ATOM 878 CB GLN 111 -5.441 -10.462 26.247 1.00 0.00 C ATOM 879 CG GLN 111 -6.870 -10.480 26.791 1.00 0.00 C ATOM 880 CD GLN 111 -7.085 -9.219 27.620 1.00 0.00 C ATOM 881 OE1 GLN 111 -6.342 -8.939 28.559 1.00 0.00 O ATOM 882 NE2 GLN 111 -8.126 -8.425 27.254 1.00 0.00 N ATOM 883 N THR 112 -3.531 -9.950 23.803 1.00 0.00 N ATOM 884 CA THR 112 -2.232 -10.096 23.211 1.00 0.00 C ATOM 885 C THR 112 -1.767 -8.780 22.663 1.00 0.00 C ATOM 886 O THR 112 -0.590 -8.438 22.760 1.00 0.00 O ATOM 887 CB THR 112 -2.203 -11.123 22.110 1.00 0.00 C ATOM 888 OG1 THR 112 -0.868 -11.357 21.698 1.00 0.00 O ATOM 889 CG2 THR 112 -3.043 -10.642 20.920 1.00 0.00 C ATOM 890 N ALA 113 -2.689 -7.995 22.076 1.00 0.00 N ATOM 891 CA ALA 113 -2.296 -6.753 21.479 1.00 0.00 C ATOM 892 C ALA 113 -1.677 -5.907 22.545 1.00 0.00 C ATOM 893 O ALA 113 -0.634 -5.292 22.335 1.00 0.00 O ATOM 894 CB ALA 113 -3.498 -5.980 20.905 1.00 0.00 C ATOM 895 N ILE 114 -2.292 -5.871 23.739 1.00 0.00 N ATOM 896 CA ILE 114 -1.758 -5.078 24.804 1.00 0.00 C ATOM 897 C ILE 114 -0.427 -5.634 25.195 1.00 0.00 C ATOM 898 O ILE 114 0.492 -4.878 25.504 1.00 0.00 O ATOM 899 CB ILE 114 -2.650 -5.002 26.005 1.00 0.00 C ATOM 900 CG1 ILE 114 -3.961 -4.281 25.634 1.00 0.00 C ATOM 901 CG2 ILE 114 -1.873 -4.285 27.119 1.00 0.00 C ATOM 902 CD1 ILE 114 -3.759 -2.835 25.175 1.00 0.00 C ATOM 903 N GLU 115 -0.284 -6.971 25.190 1.00 0.00 N ATOM 904 CA GLU 115 0.967 -7.567 25.561 1.00 0.00 C ATOM 905 C GLU 115 2.000 -7.039 24.620 1.00 0.00 C ATOM 906 O GLU 115 3.102 -6.680 25.031 1.00 0.00 O ATOM 907 CB GLU 115 0.998 -9.093 25.356 1.00 0.00 C ATOM 908 CG GLU 115 0.060 -9.902 26.250 1.00 0.00 C ATOM 909 CD GLU 115 0.247 -11.365 25.876 1.00 0.00 C ATOM 910 OE1 GLU 115 1.048 -11.636 24.945 1.00 0.00 O ATOM 911 OE2 GLU 115 -0.406 -12.233 26.515 1.00 0.00 O ATOM 912 N LEU 116 1.658 -6.975 23.320 1.00 0.00 N ATOM 913 CA LEU 116 2.606 -6.543 22.338 1.00 0.00 C ATOM 914 C LEU 116 3.012 -5.126 22.606 1.00 0.00 C ATOM 915 O LEU 116 4.203 -4.825 22.657 1.00 0.00 O ATOM 916 CB LEU 116 2.059 -6.589 20.899 1.00 0.00 C ATOM 917 CG LEU 116 1.748 -8.008 20.385 1.00 0.00 C ATOM 918 CD1 LEU 116 1.273 -7.974 18.921 1.00 0.00 C ATOM 919 CD2 LEU 116 2.936 -8.957 20.602 1.00 0.00 C ATOM 920 N LEU 117 2.044 -4.213 22.820 1.00 0.00 N ATOM 921 CA LEU 117 2.427 -2.841 22.996 1.00 0.00 C ATOM 922 C LEU 117 3.239 -2.660 24.239 1.00 0.00 C ATOM 923 O LEU 117 4.256 -1.968 24.213 1.00 0.00 O ATOM 924 CB LEU 117 1.259 -1.837 23.079 1.00 0.00 C ATOM 925 CG LEU 117 0.521 -1.570 21.751 1.00 0.00 C ATOM 926 CD1 LEU 117 -0.324 -2.770 21.309 1.00 0.00 C ATOM 927 CD2 LEU 117 -0.283 -0.258 21.821 1.00 0.00 C ATOM 928 N ILE 118 2.838 -3.280 25.364 1.00 0.00 N ATOM 929 CA ILE 118 3.565 -3.035 26.577 1.00 0.00 C ATOM 930 C ILE 118 4.967 -3.529 26.433 1.00 0.00 C ATOM 931 O ILE 118 5.915 -2.833 26.795 1.00 0.00 O ATOM 932 CB ILE 118 2.974 -3.697 27.788 1.00 0.00 C ATOM 933 CG1 ILE 118 1.572 -3.135 28.071 1.00 0.00 C ATOM 934 CG2 ILE 118 3.950 -3.502 28.963 1.00 0.00 C ATOM 935 CD1 ILE 118 0.842 -3.848 29.211 1.00 0.00 C ATOM 936 N LYS 119 5.138 -4.750 25.891 1.00 0.00 N ATOM 937 CA LYS 119 6.447 -5.319 25.779 1.00 0.00 C ATOM 938 C LYS 119 7.270 -4.502 24.832 1.00 0.00 C ATOM 939 O LYS 119 8.450 -4.262 25.077 1.00 0.00 O ATOM 940 CB LYS 119 6.438 -6.779 25.295 1.00 0.00 C ATOM 941 CG LYS 119 7.810 -7.453 25.376 1.00 0.00 C ATOM 942 CD LYS 119 8.341 -7.611 26.806 1.00 0.00 C ATOM 943 CE LYS 119 9.720 -8.271 26.888 1.00 0.00 C ATOM 944 NZ LYS 119 10.211 -8.254 28.288 1.00 0.00 N ATOM 945 N ARG 120 6.664 -4.029 23.725 1.00 0.00 N ATOM 946 CA ARG 120 7.418 -3.275 22.765 1.00 0.00 C ATOM 947 C ARG 120 7.951 -2.075 23.475 1.00 0.00 C ATOM 948 O ARG 120 9.110 -1.700 23.302 1.00 0.00 O ATOM 949 CB ARG 120 6.571 -2.726 21.599 1.00 0.00 C ATOM 950 CG ARG 120 7.442 -2.110 20.499 1.00 0.00 C ATOM 951 CD ARG 120 6.953 -0.771 19.937 1.00 0.00 C ATOM 952 NE ARG 120 5.686 -0.990 19.185 1.00 0.00 N ATOM 953 CZ ARG 120 4.490 -0.856 19.825 1.00 0.00 C ATOM 954 NH1 ARG 120 4.458 -0.542 21.153 1.00 0.00 H ATOM 955 NH2 ARG 120 3.322 -1.026 19.135 1.00 0.00 H ATOM 956 N SER 121 7.107 -1.457 24.318 1.00 0.00 N ATOM 957 CA SER 121 7.485 -0.264 25.014 1.00 0.00 C ATOM 958 C SER 121 8.651 -0.577 25.882 1.00 0.00 C ATOM 959 O SER 121 9.566 0.231 26.006 1.00 0.00 O ATOM 960 CB SER 121 6.386 0.250 25.953 1.00 0.00 C ATOM 961 OG SER 121 5.215 0.564 25.216 1.00 0.00 O ATOM 962 N ARG 122 8.638 -1.770 26.503 1.00 0.00 N ATOM 963 CA ARG 122 9.651 -2.218 27.417 1.00 0.00 C ATOM 964 C ARG 122 10.942 -2.359 26.676 1.00 0.00 C ATOM 965 O ARG 122 12.016 -2.081 27.212 1.00 0.00 O ATOM 966 CB ARG 122 9.326 -3.597 28.010 1.00 0.00 C ATOM 967 CG ARG 122 10.280 -4.047 29.123 1.00 0.00 C ATOM 968 CD ARG 122 10.172 -5.543 29.432 1.00 0.00 C ATOM 969 NE ARG 122 11.095 -5.864 30.559 1.00 0.00 N ATOM 970 CZ ARG 122 10.633 -5.792 31.843 1.00 0.00 C ATOM 971 NH1 ARG 122 9.361 -5.355 32.074 1.00 0.00 H ATOM 972 NH2 ARG 122 11.426 -6.168 32.890 1.00 0.00 H ATOM 973 N ASN 123 10.856 -2.789 25.404 1.00 0.00 N ATOM 974 CA ASN 123 12.027 -3.049 24.620 1.00 0.00 C ATOM 975 C ASN 123 12.854 -1.807 24.610 1.00 0.00 C ATOM 976 O ASN 123 14.028 -1.830 24.975 1.00 0.00 O ATOM 977 CB ASN 123 11.642 -3.393 23.167 1.00 0.00 C ATOM 978 CG ASN 123 12.872 -3.707 22.326 1.00 0.00 C ATOM 979 OD1 ASN 123 13.488 -4.762 22.458 1.00 0.00 O ATOM 980 ND2 ASN 123 13.220 -2.769 21.405 1.00 0.00 N TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 313 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 18.50 93.4 76 100.0 76 ARMSMC SECONDARY STRUCTURE . . 4.96 100.0 64 100.0 64 ARMSMC SURFACE . . . . . . . . 18.99 93.1 72 100.0 72 ARMSMC BURIED . . . . . . . . 4.09 100.0 4 100.0 4 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 87.35 44.1 34 100.0 34 ARMSSC1 RELIABLE SIDE CHAINS . 87.35 44.1 34 100.0 34 ARMSSC1 SECONDARY STRUCTURE . . 79.51 50.0 28 100.0 28 ARMSSC1 SURFACE . . . . . . . . 87.35 44.1 34 100.0 34 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 74.08 50.0 30 100.0 30 ARMSSC2 RELIABLE SIDE CHAINS . 67.55 52.2 23 100.0 23 ARMSSC2 SECONDARY STRUCTURE . . 73.12 50.0 24 100.0 24 ARMSSC2 SURFACE . . . . . . . . 74.08 50.0 30 100.0 30 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 76.37 42.9 14 100.0 14 ARMSSC3 RELIABLE SIDE CHAINS . 60.95 50.0 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 79.25 38.5 13 100.0 13 ARMSSC3 SURFACE . . . . . . . . 76.37 42.9 14 100.0 14 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 94.94 28.6 7 100.0 7 ARMSSC4 RELIABLE SIDE CHAINS . 94.94 28.6 7 100.0 7 ARMSSC4 SECONDARY STRUCTURE . . 95.92 33.3 6 100.0 6 ARMSSC4 SURFACE . . . . . . . . 94.94 28.6 7 100.0 7 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 2.59 (Number of atoms: 39) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 2.59 39 100.0 39 CRMSCA CRN = ALL/NP . . . . . 0.0665 CRMSCA SECONDARY STRUCTURE . . 2.53 32 100.0 32 CRMSCA SURFACE . . . . . . . . 2.65 37 100.0 37 CRMSCA BURIED . . . . . . . . 1.15 2 100.0 2 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 2.61 194 100.0 194 CRMSMC SECONDARY STRUCTURE . . 2.52 160 100.0 160 CRMSMC SURFACE . . . . . . . . 2.67 184 100.0 184 CRMSMC BURIED . . . . . . . . 1.22 10 100.0 10 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 5.25 157 100.0 157 CRMSSC RELIABLE SIDE CHAINS . 5.34 139 100.0 139 CRMSSC SECONDARY STRUCTURE . . 5.30 130 100.0 130 CRMSSC SURFACE . . . . . . . . 5.28 155 100.0 155 CRMSSC BURIED . . . . . . . . 1.62 2 100.0 2 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 4.08 313 100.0 313 CRMSALL SECONDARY STRUCTURE . . 4.08 258 100.0 258 CRMSALL SURFACE . . . . . . . . 4.14 303 100.0 303 CRMSALL BURIED . . . . . . . . 1.22 10 100.0 10 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.404 1.000 0.500 39 100.0 39 ERRCA SECONDARY STRUCTURE . . 2.371 1.000 0.500 32 100.0 32 ERRCA SURFACE . . . . . . . . 2.474 1.000 0.500 37 100.0 37 ERRCA BURIED . . . . . . . . 1.111 1.000 0.500 2 100.0 2 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.374 1.000 0.500 194 100.0 194 ERRMC SECONDARY STRUCTURE . . 2.311 1.000 0.500 160 100.0 160 ERRMC SURFACE . . . . . . . . 2.440 1.000 0.500 184 100.0 184 ERRMC BURIED . . . . . . . . 1.172 1.000 0.500 10 100.0 10 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.656 1.000 0.500 157 100.0 157 ERRSC RELIABLE SIDE CHAINS . 4.743 1.000 0.500 139 100.0 139 ERRSC SECONDARY STRUCTURE . . 4.699 1.000 0.500 130 100.0 130 ERRSC SURFACE . . . . . . . . 4.696 1.000 0.500 155 100.0 155 ERRSC BURIED . . . . . . . . 1.530 1.000 0.500 2 100.0 2 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.421 1.000 0.500 313 100.0 313 ERRALL SECONDARY STRUCTURE . . 3.404 1.000 0.500 258 100.0 258 ERRALL SURFACE . . . . . . . . 3.495 1.000 0.500 303 100.0 303 ERRALL BURIED . . . . . . . . 1.172 1.000 0.500 10 100.0 10 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 3 15 31 38 39 39 39 DISTCA CA (P) 7.69 38.46 79.49 97.44 100.00 39 DISTCA CA (RMS) 0.68 1.55 2.15 2.47 2.59 DISTCA ALL (N) 17 86 173 252 308 313 313 DISTALL ALL (P) 5.43 27.48 55.27 80.51 98.40 313 DISTALL ALL (RMS) 0.81 1.44 2.04 2.71 3.86 DISTALL END of the results output