####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 39 ( 313), selected 39 , name T0586TS147_1-D2 # Molecule2: number of CA atoms 39 ( 313), selected 39 , name T0586-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0586TS147_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 39 85 - 123 1.71 1.71 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 39 85 - 123 1.71 1.71 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 85 - 109 0.87 4.82 LCS_AVERAGE: 62.26 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 39 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT D 85 D 85 25 39 39 13 23 24 33 37 38 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT Q 86 Q 86 25 39 39 13 23 24 33 37 38 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 87 L 87 25 39 39 13 23 24 33 37 38 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 88 K 88 25 39 39 16 23 24 33 37 38 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 89 K 89 25 39 39 13 23 24 33 37 38 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 90 E 90 25 39 39 16 23 24 33 37 38 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 91 L 91 25 39 39 16 23 24 33 37 38 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 92 A 92 25 39 39 16 23 24 33 37 38 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT D 93 D 93 25 39 39 16 23 24 33 37 38 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 94 A 94 25 39 39 16 23 24 33 37 38 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 95 I 95 25 39 39 16 23 24 33 37 38 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT T 96 T 96 25 39 39 16 23 24 33 37 38 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 97 E 97 25 39 39 16 23 24 33 37 38 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT R 98 R 98 25 39 39 16 23 24 33 37 38 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT F 99 F 99 25 39 39 16 23 24 33 37 38 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 100 L 100 25 39 39 16 23 24 33 37 38 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 101 E 101 25 39 39 16 23 24 33 37 38 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 102 E 102 25 39 39 16 23 24 33 37 38 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 103 A 103 25 39 39 16 23 24 33 37 38 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 104 K 104 25 39 39 12 23 24 33 37 38 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT S 105 S 105 25 39 39 14 23 24 33 37 38 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 106 I 106 25 39 39 4 23 24 33 37 38 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT G 107 G 107 25 39 39 16 23 24 33 37 38 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 108 L 108 25 39 39 13 22 24 33 37 38 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT D 109 D 109 25 39 39 13 17 24 33 37 38 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT D 110 D 110 23 39 39 13 17 22 33 37 38 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT Q 111 Q 111 23 39 39 13 17 22 33 37 38 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT T 112 T 112 23 39 39 13 17 23 33 37 38 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 113 A 113 23 39 39 13 17 22 33 37 38 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 114 I 114 23 39 39 10 17 22 33 37 38 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 115 E 115 23 39 39 13 17 22 33 37 38 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 116 L 116 23 39 39 13 17 22 33 37 38 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 117 L 117 23 39 39 13 17 22 33 37 38 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 118 I 118 23 39 39 13 17 22 33 37 38 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 119 K 119 23 39 39 10 17 22 33 37 38 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT R 120 R 120 23 39 39 10 17 22 32 36 38 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT S 121 S 121 23 39 39 13 17 22 32 37 38 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT R 122 R 122 23 39 39 13 17 22 33 37 38 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT N 123 N 123 23 39 39 3 3 3 24 31 36 39 39 39 39 39 39 39 39 39 39 39 39 39 39 LCS_AVERAGE LCS_A: 87.42 ( 62.26 100.00 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 16 23 24 33 37 38 39 39 39 39 39 39 39 39 39 39 39 39 39 39 GDT PERCENT_AT 41.03 58.97 61.54 84.62 94.87 97.44 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.30 0.52 0.67 1.44 1.58 1.62 1.71 1.71 1.71 1.71 1.71 1.71 1.71 1.71 1.71 1.71 1.71 1.71 1.71 1.71 GDT RMS_ALL_AT 6.12 6.35 5.68 1.87 1.73 1.72 1.71 1.71 1.71 1.71 1.71 1.71 1.71 1.71 1.71 1.71 1.71 1.71 1.71 1.71 # Checking swapping # possible swapping detected: D 85 D 85 # possible swapping detected: E 97 E 97 # possible swapping detected: D 109 D 109 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA D 85 D 85 2.201 0 0.058 0.402 4.034 68.929 56.190 LGA Q 86 Q 86 2.707 0 0.085 1.344 7.549 64.881 42.222 LGA L 87 L 87 1.635 0 0.036 1.408 7.134 79.405 55.000 LGA K 88 K 88 1.576 0 0.050 0.868 9.473 75.238 50.212 LGA K 89 K 89 2.600 0 0.034 1.008 7.931 66.905 42.011 LGA E 90 E 90 1.497 0 0.053 0.507 4.099 83.810 64.550 LGA L 91 L 91 1.231 0 0.064 1.408 4.411 83.929 75.000 LGA A 92 A 92 2.238 0 0.043 0.040 3.113 70.833 66.667 LGA D 93 D 93 1.763 0 0.041 0.097 4.170 79.405 61.548 LGA A 94 A 94 1.081 0 0.034 0.045 1.765 83.690 81.524 LGA I 95 I 95 1.867 0 0.045 1.018 5.106 75.000 66.190 LGA T 96 T 96 1.688 0 0.080 0.080 2.724 79.286 71.973 LGA E 97 E 97 1.099 0 0.016 1.017 3.376 88.214 71.111 LGA R 98 R 98 1.365 0 0.015 1.425 8.570 81.548 53.939 LGA F 99 F 99 1.969 0 0.031 1.444 10.144 75.000 38.485 LGA L 100 L 100 1.513 0 0.071 0.096 3.458 79.286 67.381 LGA E 101 E 101 1.336 0 0.024 0.984 3.740 81.548 71.111 LGA E 102 E 102 1.732 0 0.019 0.234 3.920 77.143 61.481 LGA A 103 A 103 1.065 0 0.044 0.039 1.798 88.214 85.143 LGA K 104 K 104 1.521 0 0.017 0.708 7.531 79.405 51.376 LGA S 105 S 105 2.102 0 0.082 0.544 4.416 68.810 61.587 LGA I 106 I 106 1.424 0 0.067 0.195 2.264 79.286 76.131 LGA G 107 G 107 0.899 0 0.146 0.146 0.899 90.476 90.476 LGA L 108 L 108 0.850 0 0.021 0.757 2.184 90.476 85.060 LGA D 109 D 109 1.607 0 0.080 1.234 5.065 79.286 64.405 LGA D 110 D 110 1.685 0 0.020 0.860 5.430 72.857 56.369 LGA Q 111 Q 111 1.871 0 0.059 0.479 3.214 72.857 67.619 LGA T 112 T 112 0.958 0 0.014 1.080 2.641 90.595 81.973 LGA A 113 A 113 0.500 0 0.015 0.018 1.020 92.976 92.476 LGA I 114 I 114 1.747 0 0.070 0.136 3.908 79.286 65.595 LGA E 115 E 115 1.119 0 0.042 0.908 3.445 85.952 76.190 LGA L 116 L 116 0.825 0 0.056 0.321 1.398 90.595 86.012 LGA L 117 L 117 1.493 0 0.020 1.123 4.399 81.548 73.929 LGA I 118 I 118 0.979 0 0.015 1.238 4.348 92.857 73.810 LGA K 119 K 119 1.029 0 0.024 0.827 2.412 83.929 77.831 LGA R 120 R 120 2.405 0 0.055 0.902 5.004 64.881 50.519 LGA S 121 S 121 2.136 0 0.090 0.688 2.847 64.881 63.571 LGA R 122 R 122 1.432 0 0.213 0.986 10.945 69.405 44.589 LGA N 123 N 123 3.630 0 0.319 1.262 8.044 32.500 44.940 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 39 156 156 100.00 313 313 100.00 39 SUMMARY(RMSD_GDC): 1.708 1.719 3.057 78.080 65.800 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 39 39 4.0 39 1.71 85.897 92.319 2.157 LGA_LOCAL RMSD: 1.708 Number of atoms: 39 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 1.708 Number of assigned atoms: 39 Std_ASGN_ATOMS RMSD: 1.708 Standard rmsd on all 39 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.050424 * X + -0.998174 * Y + 0.033251 * Z + 65.549591 Y_new = -0.170630 * X + -0.041414 * Y + -0.984464 * Z + 37.498386 Z_new = 0.984044 * X + 0.043967 * Y + -0.172407 * Z + -7.118944 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.283457 -1.391919 2.891896 [DEG: -73.5367 -79.7511 165.6934 ] ZXZ: 0.033763 1.744069 1.526146 [DEG: 1.9345 99.9278 87.4417 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0586TS147_1-D2 REMARK 2: T0586-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0586TS147_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 39 39 4.0 39 1.71 92.319 1.71 REMARK ---------------------------------------------------------- MOLECULE T0586TS147_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0586 REMARK MODEL 1 REMARK PARENT 2ek5_A 3by6_A ATOM 668 N ASP 85 3.061 20.196 15.189 1.00 50.00 N ATOM 669 CA ASP 85 3.448 18.979 15.924 1.00 50.00 C ATOM 670 C ASP 85 2.216 18.205 16.409 1.00 50.00 C ATOM 671 O ASP 85 2.114 17.001 16.189 1.00 50.00 O ATOM 672 CB ASP 85 4.365 19.327 17.097 1.00 50.00 C ATOM 673 CG ASP 85 5.678 19.963 16.630 1.00 50.00 C ATOM 674 OD1 ASP 85 6.411 19.273 15.901 1.00 50.00 O ATOM 675 OD2 ASP 85 5.892 21.138 16.990 1.00 50.00 O ATOM 676 N GLN 86 1.202 18.973 16.805 1.00 50.00 N ATOM 677 CA GLN 86 -0.091 18.417 17.241 1.00 50.00 C ATOM 678 C GLN 86 -0.885 17.811 16.078 1.00 50.00 C ATOM 679 O GLN 86 -1.332 16.670 16.178 1.00 50.00 O ATOM 680 CB GLN 86 -0.930 19.481 17.941 1.00 50.00 C ATOM 681 CG GLN 86 -0.273 19.914 19.250 1.00 50.00 C ATOM 682 CD GLN 86 -1.156 20.919 19.985 1.00 50.00 C ATOM 683 OE1 GLN 86 -1.475 21.999 19.510 1.00 50.00 O ATOM 684 NE2 GLN 86 -1.567 20.544 21.177 1.00 50.00 N ATOM 685 N LEU 87 -0.893 18.506 14.942 1.00 50.00 N ATOM 686 CA LEU 87 -1.524 17.998 13.704 1.00 50.00 C ATOM 687 C LEU 87 -0.833 16.742 13.167 1.00 50.00 C ATOM 688 O LEU 87 -1.490 15.792 12.722 1.00 50.00 O ATOM 689 CB LEU 87 -1.535 19.074 12.614 1.00 50.00 C ATOM 690 CG LEU 87 -2.433 20.268 12.960 1.00 50.00 C ATOM 691 CD1 LEU 87 -2.305 21.333 11.872 1.00 50.00 C ATOM 692 CD2 LEU 87 -3.902 19.860 13.100 1.00 50.00 C ATOM 693 N LYS 88 0.466 16.673 13.395 1.00 50.00 N ATOM 694 CA LYS 88 1.270 15.517 12.980 1.00 50.00 C ATOM 695 C LYS 88 0.972 14.298 13.849 1.00 50.00 C ATOM 696 O LYS 88 0.691 13.216 13.329 1.00 50.00 O ATOM 697 CB LYS 88 2.740 15.842 13.122 1.00 99.99 C ATOM 698 CG LYS 88 3.595 14.700 12.579 1.00 99.99 C ATOM 699 CD LYS 88 3.481 14.627 11.067 1.00 99.99 C ATOM 700 CE LYS 88 4.352 13.476 10.640 1.00 99.99 C ATOM 701 NZ LYS 88 4.175 13.338 9.181 1.00 99.99 N ATOM 702 N LYS 89 0.990 14.515 15.158 1.00 50.00 N ATOM 703 CA LYS 89 0.622 13.475 16.132 1.00 50.00 C ATOM 704 C LYS 89 -0.790 12.942 15.873 1.00 50.00 C ATOM 705 O LYS 89 -1.028 11.749 16.019 1.00 50.00 O ATOM 706 CB LYS 89 0.665 14.029 17.549 1.00 50.00 C ATOM 707 CG LYS 89 2.086 14.364 18.002 1.00 50.00 C ATOM 708 CD LYS 89 2.089 14.887 19.443 1.00 50.00 C ATOM 709 CE LYS 89 1.631 13.836 20.464 1.00 50.00 C ATOM 710 NZ LYS 89 2.548 12.688 20.510 1.00 50.00 N ATOM 711 N GLU 90 -1.672 13.803 15.368 1.00 50.00 N ATOM 712 CA GLU 90 -3.055 13.418 15.023 1.00 50.00 C ATOM 713 C GLU 90 -3.107 12.499 13.799 1.00 50.00 C ATOM 714 O GLU 90 -3.781 11.470 13.832 1.00 50.00 O ATOM 715 CB GLU 90 -3.929 14.641 14.762 1.00 50.00 C ATOM 716 CG GLU 90 -4.110 15.466 16.036 1.00 50.00 C ATOM 717 CD GLU 90 -5.036 16.653 15.786 1.00 50.00 C ATOM 718 OE1 GLU 90 -4.668 17.504 14.950 1.00 50.00 O ATOM 719 OE2 GLU 90 -6.116 16.654 16.410 1.00 50.00 O ATOM 720 N LEU 91 -2.257 12.798 12.819 1.00 50.00 N ATOM 721 CA LEU 91 -2.072 11.934 11.637 1.00 50.00 C ATOM 722 C LEU 91 -1.552 10.549 12.048 1.00 50.00 C ATOM 723 O LEU 91 -2.103 9.523 11.659 1.00 50.00 O ATOM 724 CB LEU 91 -1.095 12.605 10.663 1.00 50.00 C ATOM 725 CG LEU 91 -0.920 11.807 9.364 1.00 50.00 C ATOM 726 CD1 LEU 91 -2.221 11.759 8.555 1.00 50.00 C ATOM 727 CD2 LEU 91 0.219 12.402 8.536 1.00 50.00 C ATOM 728 N ALA 92 -0.614 10.569 13.000 1.00 50.00 N ATOM 729 CA ALA 92 -0.012 9.366 13.587 1.00 50.00 C ATOM 730 C ALA 92 -0.969 8.599 14.515 1.00 50.00 C ATOM 731 O ALA 92 -1.016 7.390 14.558 1.00 50.00 O ATOM 732 CB ALA 92 1.262 9.755 14.343 1.00 50.00 C ATOM 733 N ASP 93 -1.806 9.332 15.255 1.00 50.00 N ATOM 734 CA ASP 93 -2.822 8.687 16.107 1.00 50.00 C ATOM 735 C ASP 93 -3.949 8.047 15.289 1.00 50.00 C ATOM 736 O ASP 93 -4.539 7.040 15.647 1.00 50.00 O ATOM 737 CB ASP 93 -3.379 9.683 17.129 1.00 50.00 C ATOM 738 CG ASP 93 -2.318 10.166 18.126 1.00 50.00 C ATOM 739 OD1 ASP 93 -1.299 9.459 18.306 1.00 50.00 O ATOM 740 OD2 ASP 93 -2.589 11.218 18.741 1.00 50.00 O ATOM 741 N ALA 94 -4.221 8.651 14.129 1.00 50.00 N ATOM 742 CA ALA 94 -5.188 8.081 13.177 1.00 50.00 C ATOM 743 C ALA 94 -4.679 6.747 12.610 1.00 50.00 C ATOM 744 O ALA 94 -5.421 5.760 12.568 1.00 50.00 O ATOM 745 CB ALA 94 -5.439 9.087 12.052 1.00 50.00 C ATOM 746 N ILE 95 -3.372 6.685 12.364 1.00 50.00 N ATOM 747 CA ILE 95 -2.709 5.469 11.837 1.00 50.00 C ATOM 748 C ILE 95 -2.646 4.375 12.919 1.00 50.00 C ATOM 749 O ILE 95 -3.052 3.238 12.669 1.00 50.00 O ATOM 750 CB ILE 95 -1.289 5.803 11.394 1.00 50.00 C ATOM 751 CG1 ILE 95 -0.668 6.789 12.377 1.00 50.00 C ATOM 752 CG2 ILE 95 -1.324 6.425 10.003 1.00 50.00 C ATOM 753 CD1 ILE 95 0.591 7.395 11.763 1.00 50.00 C ATOM 754 N THR 96 -2.320 4.773 14.146 1.00 50.00 N ATOM 755 CA THR 96 -2.271 3.859 15.312 1.00 50.00 C ATOM 756 C THR 96 -3.644 3.211 15.545 1.00 50.00 C ATOM 757 O THR 96 -3.746 1.986 15.632 1.00 50.00 O ATOM 758 CB THR 96 -1.835 4.561 16.608 1.00 50.00 C ATOM 759 OG1 THR 96 -2.791 5.565 16.946 1.00 50.00 O ATOM 760 CG2 THR 96 -0.425 5.154 16.520 1.00 50.00 C ATOM 761 N GLU 97 -4.688 4.025 15.396 1.00 50.00 N ATOM 762 CA GLU 97 -6.084 3.575 15.543 1.00 50.00 C ATOM 763 C GLU 97 -6.439 2.568 14.439 1.00 50.00 C ATOM 764 O GLU 97 -7.027 1.518 14.721 1.00 50.00 O ATOM 765 CB GLU 97 -7.026 4.770 15.444 1.00 50.00 C ATOM 766 CG GLU 97 -8.204 4.561 16.365 1.00 50.00 C ATOM 767 CD GLU 97 -9.021 3.363 15.883 1.00 50.00 C ATOM 768 OE1 GLU 97 -8.709 2.231 16.338 1.00 50.00 O ATOM 769 OE2 GLU 97 -9.950 3.591 15.061 1.00 50.00 O ATOM 770 N ARG 98 -6.036 2.875 13.212 1.00 50.00 N ATOM 771 CA ARG 98 -6.321 2.024 12.044 1.00 50.00 C ATOM 772 C ARG 98 -5.594 0.671 12.103 1.00 50.00 C ATOM 773 O ARG 98 -6.124 -0.372 11.721 1.00 50.00 O ATOM 774 CB ARG 98 -5.960 2.783 10.768 1.00 50.00 C ATOM 775 CG ARG 98 -6.297 1.969 9.514 1.00 50.00 C ATOM 776 CD ARG 98 -5.901 2.719 8.244 1.00 50.00 C ATOM 777 NE ARG 98 -6.760 3.907 8.086 1.00 50.00 N ATOM 778 CZ ARG 98 -7.980 3.930 7.546 1.00 50.00 C ATOM 779 NH1 ARG 98 -8.551 2.826 7.078 1.00 50.00 H ATOM 780 NH2 ARG 98 -8.644 5.074 7.461 1.00 50.00 H ATOM 781 N PHE 99 -4.357 0.679 12.596 1.00 50.00 N ATOM 782 CA PHE 99 -3.536 -0.548 12.680 1.00 50.00 C ATOM 783 C PHE 99 -4.092 -1.511 13.709 1.00 50.00 C ATOM 784 O PHE 99 -4.387 -2.667 13.407 1.00 50.00 O ATOM 785 CB PHE 99 -2.088 -0.252 13.059 1.00 50.00 C ATOM 786 CG PHE 99 -1.413 0.400 11.868 1.00 50.00 C ATOM 787 CD1 PHE 99 -1.249 -0.337 10.731 1.00 50.00 C ATOM 788 CD2 PHE 99 -1.327 1.713 11.737 1.00 50.00 C ATOM 789 CE1 PHE 99 -0.943 0.218 9.502 1.00 50.00 C ATOM 790 CE2 PHE 99 -1.152 2.328 10.473 1.00 50.00 C ATOM 791 CZ PHE 99 -0.887 1.588 9.366 1.00 50.00 C ATOM 792 N LEU 100 -4.443 -0.915 14.836 1.00 50.00 N ATOM 793 CA LEU 100 -5.075 -1.643 15.948 1.00 50.00 C ATOM 794 C LEU 100 -6.434 -2.234 15.563 1.00 50.00 C ATOM 795 O LEU 100 -6.682 -3.417 15.810 1.00 50.00 O ATOM 796 CB LEU 100 -5.243 -0.726 17.161 1.00 50.00 C ATOM 797 CG LEU 100 -3.902 -0.279 17.751 1.00 50.00 C ATOM 798 CD1 LEU 100 -4.160 0.719 18.879 1.00 50.00 C ATOM 799 CD2 LEU 100 -3.077 -1.465 18.267 1.00 50.00 C ATOM 800 N GLU 101 -7.208 -1.466 14.801 1.00 50.00 N ATOM 801 CA GLU 101 -8.536 -1.919 14.341 1.00 50.00 C ATOM 802 C GLU 101 -8.414 -3.116 13.379 1.00 50.00 C ATOM 803 O GLU 101 -9.133 -4.100 13.508 1.00 50.00 O ATOM 804 CB GLU 101 -9.342 -0.765 13.724 1.00 50.00 C ATOM 805 CG GLU 101 -8.888 -0.419 12.305 1.00 50.00 C ATOM 806 CD GLU 101 -9.518 0.785 11.625 1.00 50.00 C ATOM 807 OE1 GLU 101 -9.752 1.787 12.325 1.00 50.00 O ATOM 808 OE2 GLU 101 -9.693 0.673 10.394 1.00 50.00 O ATOM 809 N GLU 102 -7.398 -3.053 12.508 1.00 50.00 N ATOM 810 CA GLU 102 -7.144 -4.114 11.527 1.00 50.00 C ATOM 811 C GLU 102 -6.555 -5.341 12.222 1.00 50.00 C ATOM 812 O GLU 102 -6.917 -6.452 11.883 1.00 50.00 O ATOM 813 CB GLU 102 -6.213 -3.602 10.431 1.00 50.00 C ATOM 814 CG GLU 102 -6.268 -4.512 9.199 1.00 50.00 C ATOM 815 CD GLU 102 -5.432 -3.983 8.028 1.00 50.00 C ATOM 816 OE1 GLU 102 -5.210 -2.753 7.967 1.00 50.00 O ATOM 817 OE2 GLU 102 -5.041 -4.830 7.198 1.00 50.00 O ATOM 818 N ALA 103 -5.774 -5.112 13.287 1.00 50.00 N ATOM 819 CA ALA 103 -5.217 -6.169 14.143 1.00 50.00 C ATOM 820 C ALA 103 -6.283 -6.953 14.928 1.00 50.00 C ATOM 821 O ALA 103 -6.309 -8.164 14.964 1.00 50.00 O ATOM 822 CB ALA 103 -4.199 -5.566 15.116 1.00 50.00 C ATOM 823 N LYS 104 -7.263 -6.228 15.493 1.00 50.00 N ATOM 824 CA LYS 104 -8.373 -6.927 16.170 1.00 50.00 C ATOM 825 C LYS 104 -9.247 -7.682 15.160 1.00 50.00 C ATOM 826 O LYS 104 -9.691 -8.801 15.407 1.00 50.00 O ATOM 827 CB LYS 104 -9.246 -5.920 16.909 1.00 50.00 C ATOM 828 CG LYS 104 -8.475 -5.346 18.091 1.00 50.00 C ATOM 829 CD LYS 104 -9.374 -4.396 18.873 1.00 50.00 C ATOM 830 CE LYS 104 -8.580 -3.764 20.012 1.00 50.00 C ATOM 831 NZ LYS 104 -9.459 -2.885 20.795 1.00 50.00 N ATOM 832 N SER 105 -9.356 -7.083 13.972 1.00 50.00 N ATOM 833 CA SER 105 -10.080 -7.665 12.831 1.00 50.00 C ATOM 834 C SER 105 -9.376 -8.908 12.267 1.00 50.00 C ATOM 835 O SER 105 -10.036 -9.857 11.843 1.00 50.00 O ATOM 836 CB SER 105 -10.244 -6.621 11.724 1.00 50.00 C ATOM 837 OG SER 105 -11.067 -7.160 10.690 1.00 50.00 O ATOM 838 N ILE 106 -8.045 -8.939 12.361 1.00 50.00 N ATOM 839 CA ILE 106 -7.239 -10.098 11.920 1.00 50.00 C ATOM 840 C ILE 106 -7.363 -11.293 12.888 1.00 50.00 C ATOM 841 O ILE 106 -6.766 -12.338 12.653 1.00 50.00 O ATOM 842 CB ILE 106 -5.753 -9.776 11.619 1.00 50.00 C ATOM 843 CG1 ILE 106 -4.956 -9.452 12.892 1.00 50.00 C ATOM 844 CG2 ILE 106 -5.627 -8.736 10.494 1.00 50.00 C ATOM 845 CD1 ILE 106 -3.470 -9.091 12.793 1.00 50.00 C ATOM 846 N GLY 107 -8.014 -11.052 14.044 1.00 50.00 N ATOM 847 CA GLY 107 -8.207 -12.091 15.072 1.00 50.00 C ATOM 848 C GLY 107 -7.434 -11.830 16.372 1.00 50.00 C ATOM 849 O GLY 107 -7.620 -12.543 17.361 1.00 50.00 O ATOM 850 N LEU 108 -6.505 -10.880 16.344 1.00 50.00 N ATOM 851 CA LEU 108 -5.703 -10.540 17.531 1.00 50.00 C ATOM 852 C LEU 108 -6.574 -9.802 18.557 1.00 50.00 C ATOM 853 O LEU 108 -6.969 -8.662 18.349 1.00 50.00 O ATOM 854 CB LEU 108 -4.482 -9.724 17.096 1.00 50.00 C ATOM 855 CG LEU 108 -3.492 -9.456 18.232 1.00 50.00 C ATOM 856 CD1 LEU 108 -2.117 -9.207 17.631 1.00 50.00 C ATOM 857 CD2 LEU 108 -3.870 -8.190 18.996 1.00 50.00 C ATOM 858 N ASP 109 -6.741 -10.448 19.709 1.00 50.00 N ATOM 859 CA ASP 109 -7.507 -9.877 20.836 1.00 50.00 C ATOM 860 C ASP 109 -6.856 -8.610 21.414 1.00 50.00 C ATOM 861 O ASP 109 -5.650 -8.478 21.508 1.00 50.00 O ATOM 862 CB ASP 109 -7.740 -10.928 21.926 1.00 50.00 C ATOM 863 CG ASP 109 -8.646 -12.078 21.461 1.00 50.00 C ATOM 864 OD1 ASP 109 -9.440 -11.859 20.520 1.00 50.00 O ATOM 865 OD2 ASP 109 -8.559 -13.137 22.117 1.00 50.00 O ATOM 866 N ASP 110 -7.687 -7.736 21.981 1.00 50.00 N ATOM 867 CA ASP 110 -7.186 -6.461 22.533 1.00 50.00 C ATOM 868 C ASP 110 -6.183 -6.659 23.684 1.00 50.00 C ATOM 869 O ASP 110 -5.136 -6.021 23.719 1.00 50.00 O ATOM 870 CB ASP 110 -8.349 -5.637 23.074 1.00 50.00 C ATOM 871 CG ASP 110 -9.288 -6.539 23.870 1.00 50.00 C ATOM 872 OD1 ASP 110 -9.935 -7.409 23.227 1.00 50.00 O ATOM 873 OD2 ASP 110 -9.348 -6.353 25.115 1.00 50.00 O ATOM 874 N GLN 111 -6.455 -7.635 24.547 1.00 50.00 N ATOM 875 CA GLN 111 -5.604 -7.902 25.725 1.00 50.00 C ATOM 876 C GLN 111 -4.168 -8.286 25.341 1.00 50.00 C ATOM 877 O GLN 111 -3.206 -7.904 26.013 1.00 50.00 O ATOM 878 CB GLN 111 -6.218 -9.006 26.587 1.00 50.00 C ATOM 879 CG GLN 111 -7.559 -8.566 27.177 1.00 50.00 C ATOM 880 CD GLN 111 -8.134 -9.650 28.086 1.00 50.00 C ATOM 881 OE1 GLN 111 -7.545 -10.069 29.069 1.00 50.00 O ATOM 882 NE2 GLN 111 -9.321 -10.111 27.756 1.00 50.00 N ATOM 883 N THR 112 -4.042 -8.929 24.186 1.00 50.00 N ATOM 884 CA THR 112 -2.739 -9.330 23.620 1.00 50.00 C ATOM 885 C THR 112 -2.073 -8.159 22.885 1.00 50.00 C ATOM 886 O THR 112 -0.867 -7.970 23.024 1.00 50.00 O ATOM 887 CB THR 112 -2.863 -10.538 22.681 1.00 50.00 C ATOM 888 OG1 THR 112 -3.675 -10.184 21.566 1.00 50.00 O ATOM 889 CG2 THR 112 -3.472 -11.751 23.390 1.00 50.00 C ATOM 890 N ALA 113 -2.878 -7.315 22.233 1.00 50.00 N ATOM 891 CA ALA 113 -2.419 -6.035 21.649 1.00 50.00 C ATOM 892 C ALA 113 -1.804 -5.125 22.722 1.00 50.00 C ATOM 893 O ALA 113 -0.731 -4.563 22.509 1.00 50.00 O ATOM 894 CB ALA 113 -3.578 -5.287 20.984 1.00 50.00 C ATOM 895 N ILE 114 -2.394 -5.169 23.919 1.00 50.00 N ATOM 896 CA ILE 114 -1.884 -4.444 25.102 1.00 50.00 C ATOM 897 C ILE 114 -0.491 -4.982 25.460 1.00 50.00 C ATOM 898 O ILE 114 0.470 -4.222 25.540 1.00 50.00 O ATOM 899 CB ILE 114 -2.846 -4.551 26.305 1.00 50.00 C ATOM 900 CG1 ILE 114 -4.213 -3.936 25.962 1.00 50.00 C ATOM 901 CG2 ILE 114 -2.238 -3.877 27.553 1.00 50.00 C ATOM 902 CD1 ILE 114 -5.296 -4.129 27.034 1.00 50.00 C ATOM 903 N GLU 115 -0.396 -6.309 25.577 1.00 50.00 N ATOM 904 CA GLU 115 0.869 -6.994 25.893 1.00 50.00 C ATOM 905 C GLU 115 1.956 -6.738 24.832 1.00 50.00 C ATOM 906 O GLU 115 3.080 -6.383 25.114 1.00 50.00 O ATOM 907 CB GLU 115 0.663 -8.505 26.012 1.00 50.00 C ATOM 908 CG GLU 115 -0.341 -8.884 27.101 1.00 50.00 C ATOM 909 CD GLU 115 -0.499 -10.403 27.166 1.00 50.00 C ATOM 910 OE1 GLU 115 -1.060 -10.961 26.198 1.00 50.00 O ATOM 911 OE2 GLU 115 -0.003 -10.974 28.161 1.00 50.00 O ATOM 912 N LEU 116 1.552 -6.811 23.560 1.00 50.00 N ATOM 913 CA LEU 116 2.492 -6.547 22.456 1.00 50.00 C ATOM 914 C LEU 116 3.020 -5.116 22.466 1.00 50.00 C ATOM 915 O LEU 116 4.232 -4.894 22.425 1.00 50.00 O ATOM 916 CB LEU 116 1.810 -6.822 21.117 1.00 50.00 C ATOM 917 CG LEU 116 1.443 -8.295 20.957 1.00 50.00 C ATOM 918 CD1 LEU 116 0.656 -8.443 19.663 1.00 50.00 C ATOM 919 CD2 LEU 116 2.681 -9.199 20.923 1.00 50.00 C ATOM 920 N LEU 117 2.104 -4.181 22.697 1.00 50.00 N ATOM 921 CA LEU 117 2.438 -2.752 22.777 1.00 50.00 C ATOM 922 C LEU 117 3.371 -2.471 23.962 1.00 50.00 C ATOM 923 O LEU 117 4.341 -1.722 23.805 1.00 50.00 O ATOM 924 CB LEU 117 1.165 -1.931 22.956 1.00 50.00 C ATOM 925 CG LEU 117 1.485 -0.451 22.785 1.00 50.00 C ATOM 926 CD1 LEU 117 2.442 -0.007 23.886 1.00 50.00 C ATOM 927 CD2 LEU 117 2.135 -0.223 21.425 1.00 50.00 C ATOM 928 N ILE 118 3.139 -3.126 25.093 1.00 50.00 N ATOM 929 CA ILE 118 3.994 -2.952 26.293 1.00 50.00 C ATOM 930 C ILE 118 5.421 -3.469 26.023 1.00 50.00 C ATOM 931 O ILE 118 6.399 -2.815 26.375 1.00 50.00 O ATOM 932 CB ILE 118 3.404 -3.558 27.588 1.00 50.00 C ATOM 933 CG1 ILE 118 3.425 -5.095 27.581 1.00 50.00 C ATOM 934 CG2 ILE 118 2.019 -2.959 27.875 1.00 50.00 C ATOM 935 CD1 ILE 118 2.892 -5.872 28.785 1.00 50.00 C ATOM 936 N LYS 119 5.508 -4.577 25.284 1.00 50.00 N ATOM 937 CA LYS 119 6.791 -5.156 24.842 1.00 50.00 C ATOM 938 C LYS 119 7.518 -4.241 23.848 1.00 50.00 C ATOM 939 O LYS 119 8.698 -3.949 23.991 1.00 50.00 O ATOM 940 CB LYS 119 6.570 -6.506 24.164 1.00 50.00 C ATOM 941 CG LYS 119 6.071 -7.585 25.126 1.00 50.00 C ATOM 942 CD LYS 119 5.889 -8.921 24.398 1.00 50.00 C ATOM 943 CE LYS 119 7.205 -9.513 23.881 1.00 50.00 C ATOM 944 NZ LYS 119 8.109 -9.851 24.988 1.00 50.00 N ATOM 945 N ARG 120 6.760 -3.692 22.903 1.00 50.00 N ATOM 946 CA ARG 120 7.308 -2.747 21.912 1.00 50.00 C ATOM 947 C ARG 120 7.868 -1.468 22.566 1.00 50.00 C ATOM 948 O ARG 120 8.840 -0.890 22.079 1.00 50.00 O ATOM 949 CB ARG 120 6.216 -2.330 20.934 1.00 50.00 C ATOM 950 CG ARG 120 5.961 -3.460 19.942 1.00 50.00 C ATOM 951 CD ARG 120 4.903 -3.023 18.934 1.00 50.00 C ATOM 952 NE ARG 120 4.561 -4.130 18.013 1.00 50.00 N ATOM 953 CZ ARG 120 5.198 -4.339 16.864 1.00 50.00 C ATOM 954 NH1 ARG 120 6.196 -3.559 16.457 1.00 50.00 H ATOM 955 NH2 ARG 120 4.808 -5.364 16.112 1.00 50.00 H ATOM 956 N SER 121 7.294 -1.106 23.706 1.00 50.00 N ATOM 957 CA SER 121 7.654 0.129 24.433 1.00 50.00 C ATOM 958 C SER 121 8.714 -0.078 25.518 1.00 50.00 C ATOM 959 O SER 121 9.346 0.893 25.956 1.00 50.00 O ATOM 960 CB SER 121 6.405 0.759 25.052 1.00 50.00 C ATOM 961 OG SER 121 5.501 1.149 24.015 1.00 50.00 O ATOM 962 N ARG 122 8.935 -1.323 25.924 1.00 50.00 N ATOM 963 CA ARG 122 9.861 -1.652 27.025 1.00 50.00 C ATOM 964 C ARG 122 11.343 -1.393 26.692 1.00 50.00 C ATOM 965 O ARG 122 12.056 -0.842 27.512 1.00 50.00 O ATOM 966 CB ARG 122 9.663 -3.089 27.521 1.00 50.00 C ATOM 967 CG ARG 122 10.094 -4.134 26.493 1.00 50.00 C ATOM 968 CD ARG 122 9.841 -5.544 26.985 1.00 50.00 C ATOM 969 NE ARG 122 10.185 -6.506 25.924 1.00 50.00 N ATOM 970 CZ ARG 122 10.147 -7.826 26.079 1.00 50.00 C ATOM 971 NH1 ARG 122 9.769 -8.362 27.234 1.00 50.00 H ATOM 972 NH2 ARG 122 10.502 -8.626 25.085 1.00 50.00 H ATOM 973 N ASN 123 11.740 -1.741 25.463 1.00 50.00 N ATOM 974 CA ASN 123 13.145 -1.568 25.018 1.00 50.00 C ATOM 975 C ASN 123 13.556 -0.093 24.985 1.00 50.00 C ATOM 976 O ASN 123 14.704 0.247 25.325 1.00 50.00 O ATOM 977 CB ASN 123 13.369 -2.226 23.649 1.00 50.00 C ATOM 978 CG ASN 123 12.503 -1.698 22.494 1.00 50.00 C ATOM 979 OD1 ASN 123 12.067 -0.563 22.385 1.00 50.00 O ATOM 980 ND2 ASN 123 12.201 -2.546 21.558 1.00 50.00 N TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 313 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 19.24 92.1 76 100.0 76 ARMSMC SECONDARY STRUCTURE . . 8.52 98.4 64 100.0 64 ARMSMC SURFACE . . . . . . . . 19.71 91.7 72 100.0 72 ARMSMC BURIED . . . . . . . . 6.28 100.0 4 100.0 4 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 91.27 35.3 34 100.0 34 ARMSSC1 RELIABLE SIDE CHAINS . 91.27 35.3 34 100.0 34 ARMSSC1 SECONDARY STRUCTURE . . 92.20 32.1 28 100.0 28 ARMSSC1 SURFACE . . . . . . . . 91.27 35.3 34 100.0 34 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 69.67 60.0 30 100.0 30 ARMSSC2 RELIABLE SIDE CHAINS . 61.79 69.6 23 100.0 23 ARMSSC2 SECONDARY STRUCTURE . . 70.73 66.7 24 100.0 24 ARMSSC2 SURFACE . . . . . . . . 69.67 60.0 30 100.0 30 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 61.00 50.0 14 100.0 14 ARMSSC3 RELIABLE SIDE CHAINS . 58.75 58.3 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 63.30 46.2 13 100.0 13 ARMSSC3 SURFACE . . . . . . . . 61.00 50.0 14 100.0 14 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 96.31 57.1 7 100.0 7 ARMSSC4 RELIABLE SIDE CHAINS . 96.31 57.1 7 100.0 7 ARMSSC4 SECONDARY STRUCTURE . . 104.01 50.0 6 100.0 6 ARMSSC4 SURFACE . . . . . . . . 96.31 57.1 7 100.0 7 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 1.71 (Number of atoms: 39) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 1.71 39 100.0 39 CRMSCA CRN = ALL/NP . . . . . 0.0438 CRMSCA SECONDARY STRUCTURE . . 1.65 32 100.0 32 CRMSCA SURFACE . . . . . . . . 1.74 37 100.0 37 CRMSCA BURIED . . . . . . . . 0.83 2 100.0 2 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 1.84 194 100.0 194 CRMSMC SECONDARY STRUCTURE . . 1.67 160 100.0 160 CRMSMC SURFACE . . . . . . . . 1.87 184 100.0 184 CRMSMC BURIED . . . . . . . . 0.93 10 100.0 10 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 4.11 157 100.0 157 CRMSSC RELIABLE SIDE CHAINS . 4.14 139 100.0 139 CRMSSC SECONDARY STRUCTURE . . 4.10 130 100.0 130 CRMSSC SURFACE . . . . . . . . 4.14 155 100.0 155 CRMSSC BURIED . . . . . . . . 1.42 2 100.0 2 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 3.16 313 100.0 313 CRMSALL SECONDARY STRUCTURE . . 3.09 258 100.0 258 CRMSALL SURFACE . . . . . . . . 3.21 303 100.0 303 CRMSALL BURIED . . . . . . . . 0.93 10 100.0 10 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 48.401 0.938 0.940 39 100.0 39 ERRCA SECONDARY STRUCTURE . . 48.427 0.939 0.941 32 100.0 32 ERRCA SURFACE . . . . . . . . 48.356 0.937 0.939 37 100.0 37 ERRCA BURIED . . . . . . . . 49.218 0.969 0.970 2 100.0 2 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 48.650 0.938 0.941 194 100.0 194 ERRMC SECONDARY STRUCTURE . . 48.773 0.941 0.943 160 100.0 160 ERRMC SURFACE . . . . . . . . 48.622 0.937 0.939 184 100.0 184 ERRMC BURIED . . . . . . . . 49.160 0.967 0.968 10 100.0 10 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 48.042 0.873 0.882 157 100.0 157 ERRSC RELIABLE SIDE CHAINS . 48.224 0.873 0.882 139 100.0 139 ERRSC SECONDARY STRUCTURE . . 48.341 0.872 0.882 130 100.0 130 ERRSC SURFACE . . . . . . . . 48.034 0.872 0.882 155 100.0 155 ERRSC BURIED . . . . . . . . 48.653 0.948 0.949 2 100.0 2 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 48.277 0.908 0.914 313 100.0 313 ERRALL SECONDARY STRUCTURE . . 48.479 0.909 0.915 258 100.0 258 ERRALL SURFACE . . . . . . . . 48.248 0.906 0.912 303 100.0 303 ERRALL BURIED . . . . . . . . 49.160 0.967 0.968 10 100.0 10 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 6 31 38 39 39 39 39 DISTCA CA (P) 15.38 79.49 97.44 100.00 100.00 39 DISTCA CA (RMS) 0.85 1.41 1.63 1.71 1.71 DISTCA ALL (N) 47 166 230 279 311 313 313 DISTALL ALL (P) 15.02 53.04 73.48 89.14 99.36 313 DISTALL ALL (RMS) 0.74 1.35 1.72 2.25 3.05 DISTALL END of the results output