####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 39 ( 313), selected 39 , name T0586TS142_1-D2 # Molecule2: number of CA atoms 39 ( 313), selected 39 , name T0586-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0586TS142_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 39 85 - 123 2.55 2.55 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 37 86 - 122 1.97 2.63 LCS_AVERAGE: 93.23 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 101 - 121 0.85 5.25 LONGEST_CONTINUOUS_SEGMENT: 21 102 - 122 0.99 5.65 LCS_AVERAGE: 50.30 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 39 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT D 85 D 85 13 26 39 7 9 13 14 17 21 24 33 38 38 38 38 39 39 39 39 39 39 39 39 LCS_GDT Q 86 Q 86 13 37 39 7 10 13 19 29 36 37 37 38 38 38 38 39 39 39 39 39 39 39 39 LCS_GDT L 87 L 87 15 37 39 7 10 13 19 26 36 37 37 38 38 38 38 39 39 39 39 39 39 39 39 LCS_GDT K 88 K 88 19 37 39 7 12 19 21 29 36 37 37 38 38 38 38 39 39 39 39 39 39 39 39 LCS_GDT K 89 K 89 20 37 39 7 12 19 24 32 36 37 37 38 38 38 38 39 39 39 39 39 39 39 39 LCS_GDT E 90 E 90 20 37 39 8 12 19 30 32 36 37 37 38 38 38 38 39 39 39 39 39 39 39 39 LCS_GDT L 91 L 91 20 37 39 8 17 19 30 32 36 37 37 38 38 38 38 39 39 39 39 39 39 39 39 LCS_GDT A 92 A 92 20 37 39 6 17 19 30 32 36 37 37 38 38 38 38 39 39 39 39 39 39 39 39 LCS_GDT D 93 D 93 20 37 39 7 17 19 30 32 36 37 37 38 38 38 38 39 39 39 39 39 39 39 39 LCS_GDT A 94 A 94 20 37 39 7 17 20 30 32 36 37 37 38 38 38 38 39 39 39 39 39 39 39 39 LCS_GDT I 95 I 95 20 37 39 11 17 19 30 32 36 37 37 38 38 38 38 39 39 39 39 39 39 39 39 LCS_GDT T 96 T 96 20 37 39 11 17 19 30 32 36 37 37 38 38 38 38 39 39 39 39 39 39 39 39 LCS_GDT E 97 E 97 20 37 39 11 17 20 30 32 36 37 37 38 38 38 38 39 39 39 39 39 39 39 39 LCS_GDT R 98 R 98 20 37 39 11 17 20 30 32 36 37 37 38 38 38 38 39 39 39 39 39 39 39 39 LCS_GDT F 99 F 99 20 37 39 11 17 19 30 32 36 37 37 38 38 38 38 39 39 39 39 39 39 39 39 LCS_GDT L 100 L 100 20 37 39 11 17 19 30 32 36 37 37 38 38 38 38 39 39 39 39 39 39 39 39 LCS_GDT E 101 E 101 21 37 39 11 17 21 30 32 36 37 37 38 38 38 38 39 39 39 39 39 39 39 39 LCS_GDT E 102 E 102 21 37 39 11 17 21 30 32 36 37 37 38 38 38 38 39 39 39 39 39 39 39 39 LCS_GDT A 103 A 103 21 37 39 11 17 21 30 32 36 37 37 38 38 38 38 39 39 39 39 39 39 39 39 LCS_GDT K 104 K 104 21 37 39 11 17 21 30 32 36 37 37 38 38 38 38 39 39 39 39 39 39 39 39 LCS_GDT S 105 S 105 21 37 39 11 17 21 30 32 36 37 37 38 38 38 38 39 39 39 39 39 39 39 39 LCS_GDT I 106 I 106 21 37 39 12 17 21 30 32 36 37 37 38 38 38 38 39 39 39 39 39 39 39 39 LCS_GDT G 107 G 107 21 37 39 12 17 21 30 32 36 37 37 38 38 38 38 39 39 39 39 39 39 39 39 LCS_GDT L 108 L 108 21 37 39 12 17 21 30 32 36 37 37 38 38 38 38 39 39 39 39 39 39 39 39 LCS_GDT D 109 D 109 21 37 39 12 17 21 30 32 36 37 37 38 38 38 38 39 39 39 39 39 39 39 39 LCS_GDT D 110 D 110 21 37 39 10 17 21 30 32 36 37 37 38 38 38 38 39 39 39 39 39 39 39 39 LCS_GDT Q 111 Q 111 21 37 39 10 17 21 27 32 36 37 37 38 38 38 38 39 39 39 39 39 39 39 39 LCS_GDT T 112 T 112 21 37 39 12 17 21 30 32 36 37 37 38 38 38 38 39 39 39 39 39 39 39 39 LCS_GDT A 113 A 113 21 37 39 12 17 21 30 32 36 37 37 38 38 38 38 39 39 39 39 39 39 39 39 LCS_GDT I 114 I 114 21 37 39 12 17 21 30 32 36 37 37 38 38 38 38 39 39 39 39 39 39 39 39 LCS_GDT E 115 E 115 21 37 39 12 17 21 30 32 36 37 37 38 38 38 38 39 39 39 39 39 39 39 39 LCS_GDT L 116 L 116 21 37 39 12 17 21 30 32 36 37 37 38 38 38 38 39 39 39 39 39 39 39 39 LCS_GDT L 117 L 117 21 37 39 12 17 21 30 32 36 37 37 38 38 38 38 39 39 39 39 39 39 39 39 LCS_GDT I 118 I 118 21 37 39 12 17 21 30 32 36 37 37 38 38 38 38 39 39 39 39 39 39 39 39 LCS_GDT K 119 K 119 21 37 39 12 17 21 30 32 36 37 37 38 38 38 38 39 39 39 39 39 39 39 39 LCS_GDT R 120 R 120 21 37 39 12 17 21 30 32 36 37 37 38 38 38 38 39 39 39 39 39 39 39 39 LCS_GDT S 121 S 121 21 37 39 6 17 21 28 32 36 37 37 38 38 38 38 39 39 39 39 39 39 39 39 LCS_GDT R 122 R 122 21 37 39 3 5 11 21 30 35 37 37 38 38 38 38 39 39 39 39 39 39 39 39 LCS_GDT N 123 N 123 3 23 39 3 4 4 4 4 4 5 5 9 9 18 22 39 39 39 39 39 39 39 39 LCS_AVERAGE LCS_A: 81.17 ( 50.30 93.23 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 12 17 21 30 32 36 37 37 38 38 38 38 39 39 39 39 39 39 39 39 GDT PERCENT_AT 30.77 43.59 53.85 76.92 82.05 92.31 94.87 94.87 97.44 97.44 97.44 97.44 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.28 0.41 0.85 1.45 1.51 1.91 1.97 1.97 2.16 2.16 2.16 2.16 2.55 2.55 2.55 2.55 2.55 2.55 2.55 2.55 GDT RMS_ALL_AT 6.78 6.23 5.25 3.06 3.03 2.69 2.63 2.63 2.61 2.61 2.61 2.61 2.55 2.55 2.55 2.55 2.55 2.55 2.55 2.55 # Checking swapping # possible swapping detected: D 85 D 85 # possible swapping detected: E 97 E 97 # possible swapping detected: D 109 D 109 # possible swapping detected: E 115 E 115 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA D 85 D 85 6.286 0 0.073 0.319 10.107 23.333 14.048 LGA Q 86 Q 86 3.202 0 0.044 1.268 5.875 54.286 42.751 LGA L 87 L 87 3.234 0 0.058 1.120 6.730 55.476 45.119 LGA K 88 K 88 3.176 0 0.034 0.800 5.106 55.476 41.640 LGA K 89 K 89 2.194 0 0.042 0.853 6.626 70.952 49.101 LGA E 90 E 90 0.269 0 0.048 0.942 4.179 92.976 76.720 LGA L 91 L 91 0.223 0 0.043 1.059 3.613 95.238 81.548 LGA A 92 A 92 1.580 0 0.048 0.049 1.946 75.000 74.571 LGA D 93 D 93 2.256 0 0.050 0.283 3.467 66.786 59.286 LGA A 94 A 94 1.670 0 0.032 0.038 1.677 75.000 74.571 LGA I 95 I 95 0.625 0 0.038 1.055 2.405 90.476 80.714 LGA T 96 T 96 2.158 0 0.059 1.098 4.981 66.786 60.068 LGA E 97 E 97 2.751 0 0.031 0.896 8.526 62.857 39.577 LGA R 98 R 98 1.814 0 0.048 1.166 2.706 75.000 73.030 LGA F 99 F 99 1.120 0 0.026 0.103 4.658 83.690 60.952 LGA L 100 L 100 2.010 0 0.057 0.084 3.764 70.833 60.476 LGA E 101 E 101 2.286 0 0.023 0.939 2.819 68.810 64.921 LGA E 102 E 102 1.690 0 0.030 0.111 3.308 77.143 68.677 LGA A 103 A 103 1.146 0 0.027 0.046 1.716 88.214 85.143 LGA K 104 K 104 1.601 0 0.037 0.223 4.466 79.286 62.540 LGA S 105 S 105 2.303 0 0.093 0.696 5.042 64.881 57.143 LGA I 106 I 106 2.066 0 0.252 1.587 5.205 63.095 61.488 LGA G 107 G 107 1.201 0 0.124 0.124 1.279 81.429 81.429 LGA L 108 L 108 1.118 0 0.108 1.208 2.751 81.429 79.583 LGA D 109 D 109 1.918 0 0.031 1.300 5.393 75.000 62.262 LGA D 110 D 110 2.169 0 0.037 0.258 3.661 64.762 61.190 LGA Q 111 Q 111 2.728 0 0.033 0.713 6.084 60.952 41.693 LGA T 112 T 112 1.710 0 0.043 1.037 3.714 75.119 68.776 LGA A 113 A 113 0.914 0 0.045 0.055 1.397 83.690 83.238 LGA I 114 I 114 2.475 0 0.036 0.943 5.300 64.762 49.107 LGA E 115 E 115 2.379 0 0.055 0.707 4.333 68.810 57.037 LGA L 116 L 116 0.745 0 0.035 0.351 1.344 92.976 88.333 LGA L 117 L 117 1.322 0 0.025 1.078 4.524 83.690 73.155 LGA I 118 I 118 1.800 0 0.040 1.454 5.272 77.143 60.000 LGA K 119 K 119 0.690 0 0.039 1.197 3.762 92.857 78.624 LGA R 120 R 120 1.024 0 0.050 1.322 7.705 83.690 59.004 LGA S 121 S 121 1.541 0 0.602 1.014 3.466 67.262 65.317 LGA R 122 R 122 3.260 0 0.706 1.336 7.578 33.929 30.043 LGA N 123 N 123 9.347 0 0.403 1.458 12.091 3.690 1.845 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 39 156 156 100.00 313 313 100.00 39 SUMMARY(RMSD_GDC): 2.547 2.538 3.535 70.430 60.890 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 39 39 4.0 37 1.97 78.846 86.150 1.791 LGA_LOCAL RMSD: 1.966 Number of atoms: 37 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.630 Number of assigned atoms: 39 Std_ASGN_ATOMS RMSD: 2.547 Standard rmsd on all 39 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.359822 * X + -0.627799 * Y + 0.690215 * Z + 39.551815 Y_new = 0.367197 * X + -0.775349 * Y + -0.513809 * Z + 63.036533 Z_new = 0.857726 * X + 0.068565 * Y + 0.509514 * Z + -20.214884 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.346050 -1.030831 0.133766 [DEG: 134.4188 -59.0623 7.6643 ] ZXZ: 0.930877 1.036177 1.491028 [DEG: 53.3353 59.3686 85.4296 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0586TS142_1-D2 REMARK 2: T0586-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0586TS142_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 39 39 4.0 37 1.97 86.150 2.55 REMARK ---------------------------------------------------------- MOLECULE T0586TS142_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0586 REMARK MODEL 1 REMARK PARENT 3by6_A ATOM 668 N ASP 85 -0.685 20.892 9.433 1.00 54.75 N ATOM 669 CA ASP 85 -0.124 20.918 10.760 1.00 54.75 C ATOM 670 CB ASP 85 -0.119 22.344 11.342 1.00 54.75 C ATOM 671 CG ASP 85 0.764 23.216 10.463 1.00 54.75 C ATOM 672 OD1 ASP 85 1.916 22.793 10.172 1.00 54.75 O ATOM 673 OD2 ASP 85 0.298 24.318 10.068 1.00 54.75 O ATOM 674 C ASP 85 -0.963 20.085 11.683 1.00 54.75 C ATOM 675 O ASP 85 -0.461 19.223 12.406 1.00 54.75 O ATOM 676 N GLN 86 -2.288 20.315 11.664 1.00 86.11 N ATOM 677 CA GLN 86 -3.160 19.602 12.549 1.00 86.11 C ATOM 678 CB GLN 86 -4.603 20.144 12.556 1.00 86.11 C ATOM 679 CG GLN 86 -5.340 20.059 11.223 1.00 86.11 C ATOM 680 CD GLN 86 -6.723 20.653 11.456 1.00 86.11 C ATOM 681 OE1 GLN 86 -7.532 20.112 12.207 1.00 86.11 O ATOM 682 NE2 GLN 86 -7.005 21.810 10.802 1.00 86.11 N ATOM 683 C GLN 86 -3.137 18.165 12.156 1.00 86.11 C ATOM 684 O GLN 86 -3.214 17.275 13.000 1.00 86.11 O ATOM 685 N LEU 87 -3.014 17.916 10.843 1.00160.97 N ATOM 686 CA LEU 87 -2.975 16.594 10.306 1.00160.97 C ATOM 687 CB LEU 87 -2.878 16.604 8.765 1.00160.97 C ATOM 688 CG LEU 87 -2.852 15.222 8.075 1.00160.97 C ATOM 689 CD1 LEU 87 -1.527 14.475 8.302 1.00160.97 C ATOM 690 CD2 LEU 87 -4.084 14.390 8.463 1.00160.97 C ATOM 691 C LEU 87 -1.768 15.901 10.860 1.00160.97 C ATOM 692 O LEU 87 -1.818 14.700 11.104 1.00160.97 O ATOM 693 N LYS 88 -0.640 16.617 11.053 1.00113.00 N ATOM 694 CA LYS 88 0.544 15.979 11.559 1.00113.00 C ATOM 695 CB LYS 88 1.752 16.925 11.673 1.00113.00 C ATOM 696 CG LYS 88 2.948 16.260 12.356 1.00113.00 C ATOM 697 CD LYS 88 4.272 16.984 12.129 1.00113.00 C ATOM 698 CE LYS 88 5.352 16.601 13.141 1.00113.00 C ATOM 699 NZ LYS 88 5.279 15.153 13.444 1.00113.00 N ATOM 700 C LYS 88 0.269 15.423 12.918 1.00113.00 C ATOM 701 O LYS 88 0.617 14.279 13.212 1.00113.00 O ATOM 702 N LYS 89 -0.392 16.215 13.777 1.00 54.96 N ATOM 703 CA LYS 89 -0.683 15.762 15.106 1.00 54.96 C ATOM 704 CB LYS 89 -1.514 16.777 15.913 1.00 54.96 C ATOM 705 CG LYS 89 -0.930 18.184 16.029 1.00 54.96 C ATOM 706 CD LYS 89 -1.976 19.196 16.506 1.00 54.96 C ATOM 707 CE LYS 89 -1.459 20.628 16.640 1.00 54.96 C ATOM 708 NZ LYS 89 -2.551 21.514 17.098 1.00 54.96 N ATOM 709 C LYS 89 -1.577 14.573 14.981 1.00 54.96 C ATOM 710 O LYS 89 -1.417 13.561 15.662 1.00 54.96 O ATOM 711 N GLU 90 -2.547 14.684 14.062 1.00 88.63 N ATOM 712 CA GLU 90 -3.547 13.681 13.871 1.00 88.63 C ATOM 713 CB GLU 90 -4.550 14.054 12.766 1.00 88.63 C ATOM 714 CG GLU 90 -5.270 15.379 13.021 1.00 88.63 C ATOM 715 CD GLU 90 -5.937 15.302 14.384 1.00 88.63 C ATOM 716 OE1 GLU 90 -7.097 14.815 14.444 1.00 88.63 O ATOM 717 OE2 GLU 90 -5.294 15.723 15.382 1.00 88.63 O ATOM 718 C GLU 90 -2.874 12.432 13.428 1.00 88.63 C ATOM 719 O GLU 90 -3.276 11.339 13.812 1.00 88.63 O ATOM 720 N LEU 91 -1.818 12.564 12.612 1.00113.05 N ATOM 721 CA LEU 91 -1.147 11.437 12.044 1.00113.05 C ATOM 722 CB LEU 91 -0.006 11.881 11.100 1.00113.05 C ATOM 723 CG LEU 91 0.782 10.776 10.356 1.00113.05 C ATOM 724 CD1 LEU 91 1.734 11.408 9.327 1.00113.05 C ATOM 725 CD2 LEU 91 1.548 9.831 11.298 1.00113.05 C ATOM 726 C LEU 91 -0.588 10.615 13.147 1.00113.05 C ATOM 727 O LEU 91 -0.676 9.390 13.119 1.00113.05 O ATOM 728 N ALA 92 0.018 11.261 14.155 1.00 47.93 N ATOM 729 CA ALA 92 0.609 10.455 15.176 1.00 47.93 C ATOM 730 CB ALA 92 1.331 11.291 16.248 1.00 47.93 C ATOM 731 C ALA 92 -0.459 9.668 15.871 1.00 47.93 C ATOM 732 O ALA 92 -0.349 8.453 16.034 1.00 47.93 O ATOM 733 N ASP 93 -1.551 10.346 16.264 1.00 47.20 N ATOM 734 CA ASP 93 -2.580 9.693 17.019 1.00 47.20 C ATOM 735 CB ASP 93 -3.672 10.671 17.489 1.00 47.20 C ATOM 736 CG ASP 93 -3.072 11.571 18.560 1.00 47.20 C ATOM 737 OD1 ASP 93 -2.484 11.028 19.531 1.00 47.20 O ATOM 738 OD2 ASP 93 -3.182 12.817 18.408 1.00 47.20 O ATOM 739 C ASP 93 -3.252 8.651 16.188 1.00 47.20 C ATOM 740 O ASP 93 -3.476 7.528 16.634 1.00 47.20 O ATOM 741 N ALA 94 -3.568 9.011 14.937 1.00 39.93 N ATOM 742 CA ALA 94 -4.309 8.178 14.043 1.00 39.93 C ATOM 743 CB ALA 94 -4.588 8.865 12.694 1.00 39.93 C ATOM 744 C ALA 94 -3.552 6.926 13.755 1.00 39.93 C ATOM 745 O ALA 94 -4.139 5.848 13.724 1.00 39.93 O ATOM 746 N ILE 95 -2.228 7.030 13.542 1.00 84.96 N ATOM 747 CA ILE 95 -1.481 5.864 13.173 1.00 84.96 C ATOM 748 CB ILE 95 -0.049 6.169 12.828 1.00 84.96 C ATOM 749 CG2 ILE 95 0.657 6.737 14.071 1.00 84.96 C ATOM 750 CG1 ILE 95 0.623 4.926 12.219 1.00 84.96 C ATOM 751 CD1 ILE 95 1.964 5.217 11.547 1.00 84.96 C ATOM 752 C ILE 95 -1.519 4.875 14.290 1.00 84.96 C ATOM 753 O ILE 95 -1.752 3.687 14.070 1.00 84.96 O ATOM 754 N THR 96 -1.317 5.340 15.534 1.00 39.12 N ATOM 755 CA THR 96 -1.303 4.401 16.611 1.00 39.12 C ATOM 756 CB THR 96 -0.976 5.046 17.927 1.00 39.12 C ATOM 757 OG1 THR 96 0.297 5.672 17.861 1.00 39.12 O ATOM 758 CG2 THR 96 -0.969 3.967 19.025 1.00 39.12 C ATOM 759 C THR 96 -2.648 3.755 16.715 1.00 39.12 C ATOM 760 O THR 96 -2.761 2.538 16.848 1.00 39.12 O ATOM 761 N GLU 97 -3.716 4.567 16.630 1.00 74.91 N ATOM 762 CA GLU 97 -5.046 4.057 16.805 1.00 74.91 C ATOM 763 CB GLU 97 -6.106 5.168 16.839 1.00 74.91 C ATOM 764 CG GLU 97 -5.954 6.103 18.042 1.00 74.91 C ATOM 765 CD GLU 97 -5.933 5.243 19.299 1.00 74.91 C ATOM 766 OE1 GLU 97 -6.885 4.438 19.481 1.00 74.91 O ATOM 767 OE2 GLU 97 -4.962 5.372 20.091 1.00 74.91 O ATOM 768 C GLU 97 -5.410 3.124 15.690 1.00 74.91 C ATOM 769 O GLU 97 -6.002 2.071 15.927 1.00 74.91 O ATOM 770 N ARG 98 -5.057 3.478 14.440 1.00121.67 N ATOM 771 CA ARG 98 -5.462 2.699 13.302 1.00121.67 C ATOM 772 CB ARG 98 -5.016 3.289 11.955 1.00121.67 C ATOM 773 CG ARG 98 -3.497 3.327 11.774 1.00121.67 C ATOM 774 CD ARG 98 -3.057 3.772 10.378 1.00121.67 C ATOM 775 NE ARG 98 -2.842 5.244 10.423 1.00121.67 N ATOM 776 CZ ARG 98 -2.768 5.962 9.263 1.00121.67 C ATOM 777 NH1 ARG 98 -2.966 5.350 8.060 1.00121.67 N ATOM 778 NH2 ARG 98 -2.492 7.298 9.312 1.00121.67 N ATOM 779 C ARG 98 -4.845 1.344 13.368 1.00121.67 C ATOM 780 O ARG 98 -5.497 0.346 13.071 1.00121.67 O ATOM 781 N PHE 99 -3.566 1.279 13.772 1.00 87.44 N ATOM 782 CA PHE 99 -2.839 0.047 13.791 1.00 87.44 C ATOM 783 CB PHE 99 -1.396 0.263 14.286 1.00 87.44 C ATOM 784 CG PHE 99 -0.634 -1.013 14.210 1.00 87.44 C ATOM 785 CD1 PHE 99 -0.226 -1.513 12.994 1.00 87.44 C ATOM 786 CD2 PHE 99 -0.304 -1.693 15.359 1.00 87.44 C ATOM 787 CE1 PHE 99 0.486 -2.687 12.924 1.00 87.44 C ATOM 788 CE2 PHE 99 0.411 -2.866 15.295 1.00 87.44 C ATOM 789 CZ PHE 99 0.804 -3.365 14.076 1.00 87.44 C ATOM 790 C PHE 99 -3.542 -0.894 14.714 1.00 87.44 C ATOM 791 O PHE 99 -3.765 -2.054 14.371 1.00 87.44 O ATOM 792 N LEU 100 -3.936 -0.413 15.906 1.00 40.20 N ATOM 793 CA LEU 100 -4.587 -1.282 16.842 1.00 40.20 C ATOM 794 CB LEU 100 -4.899 -0.613 18.192 1.00 40.20 C ATOM 795 CG LEU 100 -3.646 -0.279 19.019 1.00 40.20 C ATOM 796 CD1 LEU 100 -4.029 0.275 20.400 1.00 40.20 C ATOM 797 CD2 LEU 100 -2.696 -1.484 19.101 1.00 40.20 C ATOM 798 C LEU 100 -5.882 -1.758 16.271 1.00 40.20 C ATOM 799 O LEU 100 -6.222 -2.934 16.388 1.00 40.20 O ATOM 800 N GLU 101 -6.642 -0.860 15.622 1.00 71.40 N ATOM 801 CA GLU 101 -7.925 -1.257 15.124 1.00 71.40 C ATOM 802 CB GLU 101 -8.718 -0.095 14.506 1.00 71.40 C ATOM 803 CG GLU 101 -10.106 -0.511 14.020 1.00 71.40 C ATOM 804 CD GLU 101 -10.857 0.741 13.594 1.00 71.40 C ATOM 805 OE1 GLU 101 -11.464 1.398 14.481 1.00 71.40 O ATOM 806 OE2 GLU 101 -10.832 1.055 12.375 1.00 71.40 O ATOM 807 C GLU 101 -7.750 -2.312 14.078 1.00 71.40 C ATOM 808 O GLU 101 -8.504 -3.282 14.037 1.00 71.40 O ATOM 809 N GLU 102 -6.735 -2.149 13.212 1.00 33.70 N ATOM 810 CA GLU 102 -6.495 -3.049 12.122 1.00 33.70 C ATOM 811 CB GLU 102 -5.343 -2.558 11.226 1.00 33.70 C ATOM 812 CG GLU 102 -5.252 -3.258 9.869 1.00 33.70 C ATOM 813 CD GLU 102 -4.277 -2.467 9.005 1.00 33.70 C ATOM 814 OE1 GLU 102 -3.702 -1.470 9.521 1.00 33.70 O ATOM 815 OE2 GLU 102 -4.094 -2.849 7.819 1.00 33.70 O ATOM 816 C GLU 102 -6.134 -4.393 12.670 1.00 33.70 C ATOM 817 O GLU 102 -6.568 -5.422 12.153 1.00 33.70 O ATOM 818 N ALA 103 -5.323 -4.413 13.744 1.00 26.61 N ATOM 819 CA ALA 103 -4.881 -5.643 14.331 1.00 26.61 C ATOM 820 CB ALA 103 -3.920 -5.425 15.515 1.00 26.61 C ATOM 821 C ALA 103 -6.062 -6.401 14.851 1.00 26.61 C ATOM 822 O ALA 103 -6.167 -7.609 14.645 1.00 26.61 O ATOM 823 N LYS 104 -6.997 -5.710 15.532 1.00 65.87 N ATOM 824 CA LYS 104 -8.153 -6.379 16.059 1.00 65.87 C ATOM 825 CB LYS 104 -9.106 -5.461 16.841 1.00 65.87 C ATOM 826 CG LYS 104 -10.322 -6.211 17.389 1.00 65.87 C ATOM 827 CD LYS 104 -11.159 -5.394 18.374 1.00 65.87 C ATOM 828 CE LYS 104 -12.420 -6.116 18.856 1.00 65.87 C ATOM 829 NZ LYS 104 -13.166 -5.267 19.813 1.00 65.87 N ATOM 830 C LYS 104 -8.928 -6.911 14.899 1.00 65.87 C ATOM 831 O LYS 104 -9.507 -7.994 14.971 1.00 65.87 O ATOM 832 N SER 105 -8.956 -6.146 13.791 1.00 22.56 N ATOM 833 CA SER 105 -9.682 -6.523 12.611 1.00 22.56 C ATOM 834 CB SER 105 -9.578 -5.478 11.486 1.00 22.56 C ATOM 835 OG SER 105 -10.225 -4.273 11.872 1.00 22.56 O ATOM 836 C SER 105 -9.097 -7.799 12.104 1.00 22.56 C ATOM 837 O SER 105 -9.800 -8.640 11.545 1.00 22.56 O ATOM 838 N ILE 106 -7.780 -7.973 12.306 1.00 85.21 N ATOM 839 CA ILE 106 -7.094 -9.162 11.901 1.00 85.21 C ATOM 840 CB ILE 106 -5.630 -9.142 12.220 1.00 85.21 C ATOM 841 CG2 ILE 106 -5.076 -10.546 11.923 1.00 85.21 C ATOM 842 CG1 ILE 106 -4.927 -8.022 11.438 1.00 85.21 C ATOM 843 CD1 ILE 106 -5.048 -8.180 9.923 1.00 85.21 C ATOM 844 C ILE 106 -7.699 -10.290 12.663 1.00 85.21 C ATOM 845 O ILE 106 -7.826 -11.400 12.151 1.00 85.21 O ATOM 846 N GLY 107 -8.121 -10.026 13.912 1.00 27.16 N ATOM 847 CA GLY 107 -8.637 -11.087 14.720 1.00 27.16 C ATOM 848 C GLY 107 -7.736 -11.207 15.901 1.00 27.16 C ATOM 849 O GLY 107 -7.948 -12.048 16.773 1.00 27.16 O ATOM 850 N LEU 108 -6.686 -10.366 15.944 1.00103.50 N ATOM 851 CA LEU 108 -5.789 -10.352 17.062 1.00103.50 C ATOM 852 CB LEU 108 -4.547 -9.492 16.744 1.00103.50 C ATOM 853 CG LEU 108 -3.447 -9.423 17.814 1.00103.50 C ATOM 854 CD1 LEU 108 -3.867 -8.546 18.992 1.00103.50 C ATOM 855 CD2 LEU 108 -2.984 -10.826 18.233 1.00103.50 C ATOM 856 C LEU 108 -6.572 -9.788 18.218 1.00103.50 C ATOM 857 O LEU 108 -7.221 -8.751 18.092 1.00103.50 O ATOM 858 N ASP 109 -6.534 -10.477 19.382 1.00 38.42 N ATOM 859 CA ASP 109 -7.320 -10.107 20.534 1.00 38.42 C ATOM 860 CB ASP 109 -7.420 -11.216 21.601 1.00 38.42 C ATOM 861 CG ASP 109 -8.317 -12.328 21.077 1.00 38.42 C ATOM 862 OD1 ASP 109 -8.846 -12.176 19.945 1.00 38.42 O ATOM 863 OD2 ASP 109 -8.487 -13.344 21.804 1.00 38.42 O ATOM 864 C ASP 109 -6.739 -8.908 21.213 1.00 38.42 C ATOM 865 O ASP 109 -5.540 -8.649 21.147 1.00 38.42 O ATOM 866 N ASP 110 -7.596 -8.149 21.920 1.00 31.79 N ATOM 867 CA ASP 110 -7.167 -6.952 22.583 1.00 31.79 C ATOM 868 CB ASP 110 -8.332 -6.183 23.222 1.00 31.79 C ATOM 869 CG ASP 110 -9.257 -5.736 22.100 1.00 31.79 C ATOM 870 OD1 ASP 110 -8.750 -5.506 20.970 1.00 31.79 O ATOM 871 OD2 ASP 110 -10.486 -5.626 22.351 1.00 31.79 O ATOM 872 C ASP 110 -6.206 -7.307 23.675 1.00 31.79 C ATOM 873 O ASP 110 -5.190 -6.638 23.859 1.00 31.79 O ATOM 874 N GLN 111 -6.493 -8.395 24.415 1.00 77.32 N ATOM 875 CA GLN 111 -5.678 -8.768 25.538 1.00 77.32 C ATOM 876 CB GLN 111 -6.206 -10.012 26.274 1.00 77.32 C ATOM 877 CG GLN 111 -6.166 -11.271 25.407 1.00 77.32 C ATOM 878 CD GLN 111 -6.604 -12.452 26.257 1.00 77.32 C ATOM 879 OE1 GLN 111 -6.860 -12.313 27.451 1.00 77.32 O ATOM 880 NE2 GLN 111 -6.685 -13.651 25.623 1.00 77.32 N ATOM 881 C GLN 111 -4.296 -9.099 25.069 1.00 77.32 C ATOM 882 O GLN 111 -3.314 -8.730 25.707 1.00 77.32 O ATOM 883 N THR 112 -4.179 -9.820 23.943 1.00 99.42 N ATOM 884 CA THR 112 -2.889 -10.185 23.442 1.00 99.42 C ATOM 885 CB THR 112 -2.945 -11.206 22.344 1.00 99.42 C ATOM 886 OG1 THR 112 -1.632 -11.641 22.034 1.00 99.42 O ATOM 887 CG2 THR 112 -3.606 -10.591 21.104 1.00 99.42 C ATOM 888 C THR 112 -2.184 -8.960 22.951 1.00 99.42 C ATOM 889 O THR 112 -0.967 -8.844 23.084 1.00 99.42 O ATOM 890 N ALA 113 -2.944 -8.003 22.383 1.00 31.50 N ATOM 891 CA ALA 113 -2.377 -6.799 21.853 1.00 31.50 C ATOM 892 CB ALA 113 -3.442 -5.843 21.290 1.00 31.50 C ATOM 893 C ALA 113 -1.670 -6.099 22.969 1.00 31.50 C ATOM 894 O ALA 113 -0.600 -5.524 22.773 1.00 31.50 O ATOM 895 N ILE 114 -2.240 -6.122 24.186 1.00 82.62 N ATOM 896 CA ILE 114 -1.546 -5.449 25.244 1.00 82.62 C ATOM 897 CB ILE 114 -2.273 -5.386 26.563 1.00 82.62 C ATOM 898 CG2 ILE 114 -2.226 -6.758 27.257 1.00 82.62 C ATOM 899 CG1 ILE 114 -1.665 -4.273 27.432 1.00 82.62 C ATOM 900 CD1 ILE 114 -2.501 -3.965 28.674 1.00 82.62 C ATOM 901 C ILE 114 -0.239 -6.147 25.461 1.00 82.62 C ATOM 902 O ILE 114 0.786 -5.502 25.676 1.00 82.62 O ATOM 903 N GLU 115 -0.237 -7.494 25.403 1.00 32.71 N ATOM 904 CA GLU 115 0.958 -8.239 25.682 1.00 32.71 C ATOM 905 CB GLU 115 0.763 -9.762 25.543 1.00 32.71 C ATOM 906 CG GLU 115 -0.238 -10.375 26.522 1.00 32.71 C ATOM 907 CD GLU 115 -0.290 -11.874 26.249 1.00 32.71 C ATOM 908 OE1 GLU 115 0.616 -12.378 25.533 1.00 32.71 O ATOM 909 OE2 GLU 115 -1.236 -12.535 26.752 1.00 32.71 O ATOM 910 C GLU 115 2.005 -7.868 24.681 1.00 32.71 C ATOM 911 O GLU 115 3.150 -7.596 25.033 1.00 32.71 O ATOM 912 N LEU 116 1.638 -7.835 23.390 1.00 34.71 N ATOM 913 CA LEU 116 2.618 -7.543 22.390 1.00 34.71 C ATOM 914 CB LEU 116 2.067 -7.620 20.955 1.00 34.71 C ATOM 915 CG LEU 116 1.670 -9.037 20.501 1.00 34.71 C ATOM 916 CD1 LEU 116 1.145 -9.031 19.057 1.00 34.71 C ATOM 917 CD2 LEU 116 2.821 -10.034 20.700 1.00 34.71 C ATOM 918 C LEU 116 3.120 -6.154 22.598 1.00 34.71 C ATOM 919 O LEU 116 4.320 -5.905 22.531 1.00 34.71 O ATOM 920 N LEU 117 2.204 -5.212 22.880 1.00 94.88 N ATOM 921 CA LEU 117 2.577 -3.833 23.000 1.00 94.88 C ATOM 922 CB LEU 117 1.352 -2.931 23.252 1.00 94.88 C ATOM 923 CG LEU 117 1.615 -1.413 23.153 1.00 94.88 C ATOM 924 CD1 LEU 117 2.560 -0.903 24.254 1.00 94.88 C ATOM 925 CD2 LEU 117 2.060 -1.024 21.732 1.00 94.88 C ATOM 926 C LEU 117 3.518 -3.680 24.152 1.00 94.88 C ATOM 927 O LEU 117 4.544 -3.012 24.035 1.00 94.88 O ATOM 928 N ILE 118 3.213 -4.325 25.294 1.00127.58 N ATOM 929 CA ILE 118 4.039 -4.130 26.451 1.00127.58 C ATOM 930 CB ILE 118 3.518 -4.838 27.686 1.00127.58 C ATOM 931 CG2 ILE 118 3.549 -6.353 27.437 1.00127.58 C ATOM 932 CG1 ILE 118 4.277 -4.421 28.961 1.00127.58 C ATOM 933 CD1 ILE 118 5.725 -4.908 29.043 1.00127.58 C ATOM 934 C ILE 118 5.417 -4.610 26.136 1.00127.58 C ATOM 935 O ILE 118 6.397 -3.930 26.429 1.00127.58 O ATOM 936 N LYS 119 5.536 -5.794 25.508 1.00 59.65 N ATOM 937 CA LYS 119 6.844 -6.320 25.245 1.00 59.65 C ATOM 938 CB LYS 119 6.808 -7.698 24.560 1.00 59.65 C ATOM 939 CG LYS 119 6.133 -8.787 25.393 1.00 59.65 C ATOM 940 CD LYS 119 5.830 -10.060 24.598 1.00 59.65 C ATOM 941 CE LYS 119 5.042 -11.108 25.386 1.00 59.65 C ATOM 942 NZ LYS 119 5.786 -11.502 26.600 1.00 59.65 N ATOM 943 C LYS 119 7.561 -5.414 24.302 1.00 59.65 C ATOM 944 O LYS 119 8.702 -5.024 24.544 1.00 59.65 O ATOM 945 N ARG 120 6.881 -5.028 23.211 1.00158.95 N ATOM 946 CA ARG 120 7.507 -4.272 22.171 1.00158.95 C ATOM 947 CB ARG 120 6.536 -4.015 21.006 1.00158.95 C ATOM 948 CG ARG 120 7.217 -3.595 19.704 1.00158.95 C ATOM 949 CD ARG 120 6.306 -3.743 18.481 1.00158.95 C ATOM 950 NE ARG 120 5.581 -2.457 18.286 1.00158.95 N ATOM 951 CZ ARG 120 6.097 -1.505 17.455 1.00158.95 C ATOM 952 NH1 ARG 120 7.267 -1.737 16.790 1.00158.95 N ATOM 953 NH2 ARG 120 5.434 -0.327 17.276 1.00158.95 N ATOM 954 C ARG 120 7.977 -2.964 22.711 1.00158.95 C ATOM 955 O ARG 120 9.124 -2.575 22.496 1.00158.95 O ATOM 956 N SER 121 7.109 -2.257 23.451 1.00158.59 N ATOM 957 CA SER 121 7.476 -0.981 23.986 1.00158.59 C ATOM 958 CB SER 121 6.285 -0.021 24.144 1.00158.59 C ATOM 959 OG SER 121 5.725 0.275 22.875 1.00158.59 O ATOM 960 C SER 121 8.019 -1.214 25.349 1.00158.59 C ATOM 961 O SER 121 8.261 -2.348 25.754 1.00158.59 O ATOM 962 N ARG 122 8.284 -0.117 26.077 1.00292.50 N ATOM 963 CA ARG 122 8.691 -0.276 27.438 1.00292.50 C ATOM 964 CB ARG 122 9.384 0.949 28.057 1.00292.50 C ATOM 965 CG ARG 122 10.134 0.602 29.347 1.00292.50 C ATOM 966 CD ARG 122 10.684 1.812 30.107 1.00292.50 C ATOM 967 NE ARG 122 9.832 2.020 31.310 1.00292.50 N ATOM 968 CZ ARG 122 10.423 2.289 32.512 1.00292.50 C ATOM 969 NH1 ARG 122 11.784 2.352 32.598 1.00292.50 N ATOM 970 NH2 ARG 122 9.659 2.491 33.624 1.00292.50 N ATOM 971 C ARG 122 7.416 -0.505 28.178 1.00292.50 C ATOM 972 O ARG 122 6.347 -0.135 27.696 1.00292.50 O ATOM 973 N ASN 123 7.481 -1.131 29.367 1.00254.15 N ATOM 974 CA ASN 123 6.258 -1.438 30.043 1.00254.15 C ATOM 975 CB ASN 123 6.443 -2.278 31.324 1.00254.15 C ATOM 976 CG ASN 123 7.263 -1.486 32.337 1.00254.15 C ATOM 977 OD1 ASN 123 8.461 -1.714 32.494 1.00254.15 O ATOM 978 ND2 ASN 123 6.600 -0.531 33.044 1.00254.15 N ATOM 979 C ASN 123 5.551 -0.171 30.400 1.00254.15 C ATOM 980 O ASN 123 6.167 0.820 30.790 1.00254.15 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 313 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 30.61 90.8 76 100.0 76 ARMSMC SECONDARY STRUCTURE . . 18.22 96.9 64 100.0 64 ARMSMC SURFACE . . . . . . . . 31.43 90.3 72 100.0 72 ARMSMC BURIED . . . . . . . . 4.78 100.0 4 100.0 4 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 91.71 41.2 34 100.0 34 ARMSSC1 RELIABLE SIDE CHAINS . 91.71 41.2 34 100.0 34 ARMSSC1 SECONDARY STRUCTURE . . 90.21 42.9 28 100.0 28 ARMSSC1 SURFACE . . . . . . . . 91.71 41.2 34 100.0 34 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 76.81 53.3 30 100.0 30 ARMSSC2 RELIABLE SIDE CHAINS . 73.02 56.5 23 100.0 23 ARMSSC2 SECONDARY STRUCTURE . . 71.88 62.5 24 100.0 24 ARMSSC2 SURFACE . . . . . . . . 76.81 53.3 30 100.0 30 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 81.04 35.7 14 100.0 14 ARMSSC3 RELIABLE SIDE CHAINS . 75.34 41.7 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 81.65 38.5 13 100.0 13 ARMSSC3 SURFACE . . . . . . . . 81.04 35.7 14 100.0 14 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 62.22 57.1 7 100.0 7 ARMSSC4 RELIABLE SIDE CHAINS . 62.22 57.1 7 100.0 7 ARMSSC4 SECONDARY STRUCTURE . . 64.85 66.7 6 100.0 6 ARMSSC4 SURFACE . . . . . . . . 62.22 57.1 7 100.0 7 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 2.55 (Number of atoms: 39) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 2.55 39 100.0 39 CRMSCA CRN = ALL/NP . . . . . 0.0653 CRMSCA SECONDARY STRUCTURE . . 2.09 32 100.0 32 CRMSCA SURFACE . . . . . . . . 2.60 37 100.0 37 CRMSCA BURIED . . . . . . . . 1.07 2 100.0 2 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 2.66 194 100.0 194 CRMSMC SECONDARY STRUCTURE . . 2.10 160 100.0 160 CRMSMC SURFACE . . . . . . . . 2.71 184 100.0 184 CRMSMC BURIED . . . . . . . . 1.18 10 100.0 10 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 4.32 157 100.0 157 CRMSSC RELIABLE SIDE CHAINS . 4.19 139 100.0 139 CRMSSC SECONDARY STRUCTURE . . 3.87 130 100.0 130 CRMSSC SURFACE . . . . . . . . 4.35 155 100.0 155 CRMSSC BURIED . . . . . . . . 1.42 2 100.0 2 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 3.55 313 100.0 313 CRMSALL SECONDARY STRUCTURE . . 3.07 258 100.0 258 CRMSALL SURFACE . . . . . . . . 3.60 303 100.0 303 CRMSALL BURIED . . . . . . . . 1.18 10 100.0 10 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 81.559 0.930 0.934 39 100.0 39 ERRCA SECONDARY STRUCTURE . . 73.373 0.932 0.935 32 100.0 32 ERRCA SURFACE . . . . . . . . 84.455 0.930 0.934 37 100.0 37 ERRCA BURIED . . . . . . . . 27.991 0.928 0.931 2 100.0 2 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 81.804 0.931 0.934 194 100.0 194 ERRMC SECONDARY STRUCTURE . . 73.373 0.932 0.935 160 100.0 160 ERRMC SURFACE . . . . . . . . 84.734 0.931 0.934 184 100.0 184 ERRMC BURIED . . . . . . . . 27.899 0.923 0.926 10 100.0 10 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 90.177 0.899 0.906 157 100.0 157 ERRSC RELIABLE SIDE CHAINS . 88.546 0.898 0.905 139 100.0 139 ERRSC SECONDARY STRUCTURE . . 77.752 0.898 0.905 130 100.0 130 ERRSC SURFACE . . . . . . . . 90.983 0.899 0.906 155 100.0 155 ERRSC BURIED . . . . . . . . 27.670 0.907 0.912 2 100.0 2 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 85.911 0.916 0.921 313 100.0 313 ERRALL SECONDARY STRUCTURE . . 75.633 0.917 0.922 258 100.0 258 ERRALL SURFACE . . . . . . . . 87.825 0.916 0.921 303 100.0 303 ERRALL BURIED . . . . . . . . 27.899 0.923 0.926 10 100.0 10 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 6 15 34 37 39 39 39 DISTCA CA (P) 15.38 38.46 87.18 94.87 100.00 39 DISTCA CA (RMS) 0.81 1.22 1.94 2.06 2.55 DISTCA ALL (N) 27 111 201 271 309 313 313 DISTALL ALL (P) 8.63 35.46 64.22 86.58 98.72 313 DISTALL ALL (RMS) 0.82 1.41 1.94 2.59 3.37 DISTALL END of the results output