####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 39 ( 313), selected 39 , name T0586TS127_1-D2 # Molecule2: number of CA atoms 39 ( 313), selected 39 , name T0586-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0586TS127_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 39 85 - 123 2.06 2.06 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 38 86 - 123 1.88 2.08 LCS_AVERAGE: 96.25 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 29 94 - 122 0.99 2.64 LONGEST_CONTINUOUS_SEGMENT: 29 95 - 123 0.89 2.43 LCS_AVERAGE: 64.56 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 39 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT D 85 D 85 12 20 39 10 11 12 13 18 23 24 33 37 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT Q 86 Q 86 12 38 39 10 11 25 30 31 34 36 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 87 L 87 12 38 39 10 11 12 14 31 34 35 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 88 K 88 12 38 39 10 11 12 13 18 23 35 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 89 K 89 12 38 39 10 11 12 14 20 34 36 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 90 E 90 12 38 39 10 21 29 30 31 34 36 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 91 L 91 12 38 39 10 11 12 26 31 34 36 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 92 A 92 12 38 39 10 11 12 28 31 34 36 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT D 93 D 93 16 38 39 10 11 12 23 31 34 36 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 94 A 94 29 38 39 10 11 12 30 31 32 36 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 95 I 95 29 38 39 5 20 29 30 31 34 36 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT T 96 T 96 29 38 39 11 21 29 30 31 34 36 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 97 E 97 29 38 39 11 21 29 30 31 34 36 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT R 98 R 98 29 38 39 11 21 29 30 31 34 36 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT F 99 F 99 29 38 39 11 21 29 30 31 34 36 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 100 L 100 29 38 39 11 21 29 30 31 34 36 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 101 E 101 29 38 39 11 21 29 30 31 34 36 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 102 E 102 29 38 39 11 21 29 30 31 34 36 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 103 A 103 29 38 39 11 21 29 30 31 34 36 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 104 K 104 29 38 39 11 21 29 30 31 34 36 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT S 105 S 105 29 38 39 11 21 29 30 31 34 36 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 106 I 106 29 38 39 11 21 29 30 31 34 36 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT G 107 G 107 29 38 39 11 21 29 30 31 34 36 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 108 L 108 29 38 39 11 21 29 30 31 34 36 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT D 109 D 109 29 38 39 6 21 29 30 31 34 36 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT D 110 D 110 29 38 39 6 21 29 30 31 34 36 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT Q 111 Q 111 29 38 39 7 21 29 30 31 34 36 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT T 112 T 112 29 38 39 11 21 29 30 31 34 36 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 113 A 113 29 38 39 7 20 29 30 31 34 36 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 114 I 114 29 38 39 7 21 29 30 31 34 36 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 115 E 115 29 38 39 11 21 29 30 31 34 36 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 116 L 116 29 38 39 6 19 29 30 31 34 36 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 117 L 117 29 38 39 6 19 27 30 31 34 36 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 118 I 118 29 38 39 3 21 29 30 31 34 36 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 119 K 119 29 38 39 5 18 29 30 31 34 36 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT R 120 R 120 29 38 39 7 16 29 30 31 34 36 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT S 121 S 121 29 38 39 11 21 29 30 31 34 36 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT R 122 R 122 29 38 39 11 21 29 30 31 34 36 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT N 123 N 123 29 38 39 4 21 29 30 31 34 36 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_AVERAGE LCS_A: 86.94 ( 64.56 96.25 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 11 21 29 30 31 34 36 37 38 39 39 39 39 39 39 39 39 39 39 39 GDT PERCENT_AT 28.21 53.85 74.36 76.92 79.49 87.18 92.31 94.87 97.44 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.30 0.59 0.83 0.89 1.00 1.38 1.62 1.72 1.88 2.06 2.06 2.06 2.06 2.06 2.06 2.06 2.06 2.06 2.06 2.06 GDT RMS_ALL_AT 2.95 2.55 2.49 2.47 2.62 2.14 2.20 2.14 2.08 2.06 2.06 2.06 2.06 2.06 2.06 2.06 2.06 2.06 2.06 2.06 # Checking swapping # possible swapping detected: E 97 E 97 # possible swapping detected: E 101 E 101 # possible swapping detected: E 115 E 115 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA D 85 D 85 6.505 0 0.068 0.300 10.231 22.381 12.976 LGA Q 86 Q 86 2.201 0 0.077 0.828 3.721 65.595 69.894 LGA L 87 L 87 3.642 0 0.033 1.425 8.429 46.786 32.619 LGA K 88 K 88 5.265 0 0.069 0.224 12.475 34.524 17.672 LGA K 89 K 89 3.746 0 0.075 0.746 7.765 52.143 34.762 LGA E 90 E 90 1.729 0 0.095 1.144 8.099 72.976 47.037 LGA L 91 L 91 3.108 0 0.049 1.419 9.386 61.071 37.560 LGA A 92 A 92 2.959 0 0.056 0.066 4.449 60.952 56.190 LGA D 93 D 93 3.636 0 0.075 0.175 6.485 48.810 35.298 LGA A 94 A 94 3.635 0 0.067 0.077 4.154 48.452 46.190 LGA I 95 I 95 1.646 0 0.074 0.655 2.368 77.143 72.976 LGA T 96 T 96 0.486 0 0.089 1.089 2.312 92.857 84.490 LGA E 97 E 97 1.169 0 0.068 0.773 2.517 83.690 75.079 LGA R 98 R 98 1.121 0 0.103 1.106 5.282 88.333 68.009 LGA F 99 F 99 0.613 0 0.058 0.209 0.901 95.238 93.074 LGA L 100 L 100 0.629 0 0.063 0.063 1.353 90.476 89.345 LGA E 101 E 101 0.662 0 0.084 0.409 2.175 95.238 85.767 LGA E 102 E 102 0.186 0 0.048 0.563 2.342 97.619 91.905 LGA A 103 A 103 0.560 0 0.031 0.035 0.713 92.857 92.381 LGA K 104 K 104 0.766 0 0.095 1.016 5.827 92.857 70.741 LGA S 105 S 105 0.590 0 0.147 0.724 3.026 88.214 82.222 LGA I 106 I 106 0.567 0 0.275 1.394 2.935 92.857 80.000 LGA G 107 G 107 0.671 0 0.066 0.066 0.914 90.476 90.476 LGA L 108 L 108 0.847 0 0.050 1.397 2.934 88.214 80.833 LGA D 109 D 109 1.022 0 0.055 1.212 3.865 88.214 76.905 LGA D 110 D 110 1.003 0 0.034 0.858 3.663 88.214 73.095 LGA Q 111 Q 111 0.632 0 0.038 0.962 2.139 92.857 83.757 LGA T 112 T 112 0.577 0 0.047 0.060 1.186 92.857 90.544 LGA A 113 A 113 1.455 0 0.069 0.064 1.920 83.690 81.524 LGA I 114 I 114 1.281 0 0.022 0.164 2.422 85.952 79.464 LGA E 115 E 115 0.248 0 0.030 0.910 2.336 97.619 85.079 LGA L 116 L 116 1.175 0 0.043 1.292 4.591 83.690 68.274 LGA L 117 L 117 1.694 0 0.052 0.634 2.993 81.548 71.250 LGA I 118 I 118 0.991 0 0.072 1.369 5.376 88.214 70.298 LGA K 119 K 119 1.441 0 0.070 1.332 6.016 81.548 64.815 LGA R 120 R 120 1.256 0 0.045 1.412 4.751 85.952 74.762 LGA S 121 S 121 0.327 0 0.113 0.740 1.293 92.976 90.635 LGA R 122 R 122 1.344 0 0.240 1.297 9.929 81.548 46.407 LGA N 123 N 123 1.398 0 0.344 1.157 6.650 61.071 49.345 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 39 156 156 100.00 313 313 100.00 39 SUMMARY(RMSD_GDC): 2.055 1.922 3.184 78.608 68.042 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 39 39 4.0 37 1.72 81.410 88.919 2.038 LGA_LOCAL RMSD: 1.715 Number of atoms: 37 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.142 Number of assigned atoms: 39 Std_ASGN_ATOMS RMSD: 2.055 Standard rmsd on all 39 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.327891 * X + -0.697261 * Y + 0.637428 * Z + -30.654827 Y_new = 0.805469 * X + 0.146250 * Y + 0.574309 * Z + -18.399281 Z_new = -0.493668 * X + 0.701739 * Y + 0.513668 * Z + -35.296722 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.957392 0.516302 0.938919 [DEG: 112.1503 29.5819 53.7961 ] ZXZ: 2.304152 1.031342 -0.613066 [DEG: 132.0182 59.0915 -35.1261 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0586TS127_1-D2 REMARK 2: T0586-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0586TS127_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 39 39 4.0 37 1.72 88.919 2.06 REMARK ---------------------------------------------------------- MOLECULE T0586TS127_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0586 REMARK MODEL 1 REFINED REMARK PARENT 2EK5_C ATOM 668 N ASP 85 -2.889 19.427 19.640 1.00 0.00 N ATOM 669 CA ASP 85 -4.061 18.548 19.493 1.00 0.00 C ATOM 670 C ASP 85 -4.094 18.031 18.036 1.00 0.00 C ATOM 671 O ASP 85 -4.245 16.841 17.849 1.00 0.00 O ATOM 672 CB ASP 85 -5.321 19.367 19.797 1.00 0.00 C ATOM 673 CG ASP 85 -5.526 19.801 21.271 1.00 0.00 C ATOM 674 OD1 ASP 85 -5.950 20.970 21.478 1.00 0.00 O ATOM 675 OD2 ASP 85 -5.472 18.894 22.142 1.00 0.00 O ATOM 676 N GLN 86 -3.960 18.927 17.043 1.00 0.00 N ATOM 677 CA GLN 86 -3.916 18.474 15.639 1.00 0.00 C ATOM 678 C GLN 86 -2.842 17.413 15.469 1.00 0.00 C ATOM 679 O GLN 86 -3.091 16.378 14.886 1.00 0.00 O ATOM 680 CB GLN 86 -3.684 19.683 14.688 1.00 0.00 C ATOM 681 CG GLN 86 -4.789 20.790 14.740 1.00 0.00 C ATOM 682 CD GLN 86 -6.164 20.151 14.932 1.00 0.00 C ATOM 683 OE1 GLN 86 -6.763 20.345 15.974 1.00 0.00 O ATOM 684 NE2 GLN 86 -6.698 19.476 13.921 1.00 0.00 N ATOM 685 N LEU 87 -1.598 17.678 15.976 1.00 0.00 N ATOM 686 CA LEU 87 -0.502 16.694 15.904 1.00 0.00 C ATOM 687 C LEU 87 -0.883 15.379 16.605 1.00 0.00 C ATOM 688 O LEU 87 -0.585 14.281 16.107 1.00 0.00 O ATOM 689 CB LEU 87 0.729 17.216 16.627 1.00 0.00 C ATOM 690 CG LEU 87 1.295 18.475 16.009 1.00 0.00 C ATOM 691 CD1 LEU 87 2.215 19.183 17.013 1.00 0.00 C ATOM 692 CD2 LEU 87 2.084 18.166 14.733 1.00 0.00 C ATOM 693 N LYS 88 -1.594 15.475 17.731 1.00 0.00 N ATOM 694 CA LYS 88 -2.125 14.268 18.311 1.00 0.00 C ATOM 695 C LYS 88 -3.103 13.477 17.395 1.00 0.00 C ATOM 696 O LYS 88 -2.853 12.278 17.304 1.00 0.00 O ATOM 697 CB LYS 88 -2.774 14.571 19.633 1.00 0.00 C ATOM 698 CG LYS 88 -3.075 13.204 20.253 1.00 0.00 C ATOM 699 CD LYS 88 -3.641 13.265 21.665 1.00 0.00 C ATOM 700 CE LYS 88 -3.798 11.896 22.288 1.00 0.00 C ATOM 701 NZ LYS 88 -4.594 11.845 23.554 1.00 0.00 N ATOM 702 N LYS 89 -4.196 14.041 16.870 1.00 0.00 N ATOM 703 CA LYS 89 -5.050 13.404 15.819 1.00 0.00 C ATOM 704 C LYS 89 -4.270 12.898 14.572 1.00 0.00 C ATOM 705 O LYS 89 -4.670 11.888 14.004 1.00 0.00 O ATOM 706 CB LYS 89 -6.187 14.364 15.335 1.00 0.00 C ATOM 707 CG LYS 89 -7.347 14.615 16.321 1.00 0.00 C ATOM 708 CD LYS 89 -8.677 15.092 15.646 1.00 0.00 C ATOM 709 CE LYS 89 -9.844 15.532 16.614 1.00 0.00 C ATOM 710 NZ LYS 89 -10.217 14.351 17.464 1.00 0.00 N ATOM 711 N GLU 90 -3.216 13.603 14.150 1.00 0.00 N ATOM 712 CA GLU 90 -2.261 13.189 13.136 1.00 0.00 C ATOM 713 C GLU 90 -1.458 11.924 13.525 1.00 0.00 C ATOM 714 O GLU 90 -1.487 10.928 12.787 1.00 0.00 O ATOM 715 CB GLU 90 -1.326 14.399 12.898 1.00 0.00 C ATOM 716 CG GLU 90 -0.255 14.281 11.811 1.00 0.00 C ATOM 717 CD GLU 90 0.491 15.590 11.642 1.00 0.00 C ATOM 718 OE1 GLU 90 -0.016 16.383 10.817 1.00 0.00 O ATOM 719 OE2 GLU 90 1.480 15.794 12.367 1.00 0.00 O ATOM 720 N LEU 91 -0.783 11.845 14.682 1.00 0.00 N ATOM 721 CA LEU 91 -0.201 10.541 15.092 1.00 0.00 C ATOM 722 C LEU 91 -1.245 9.437 15.385 1.00 0.00 C ATOM 723 O LEU 91 -1.030 8.281 15.017 1.00 0.00 O ATOM 724 CB LEU 91 0.707 10.748 16.286 1.00 0.00 C ATOM 725 CG LEU 91 1.458 9.464 16.684 1.00 0.00 C ATOM 726 CD1 LEU 91 2.567 9.080 15.704 1.00 0.00 C ATOM 727 CD2 LEU 91 2.071 9.658 18.074 1.00 0.00 C ATOM 728 N ALA 92 -2.382 9.770 15.982 1.00 0.00 N ATOM 729 CA ALA 92 -3.504 8.849 16.095 1.00 0.00 C ATOM 730 C ALA 92 -3.978 8.260 14.736 1.00 0.00 C ATOM 731 O ALA 92 -4.039 7.051 14.602 1.00 0.00 O ATOM 732 CB ALA 92 -4.640 9.597 16.758 1.00 0.00 C ATOM 733 N ASP 93 -4.194 9.090 13.686 1.00 0.00 N ATOM 734 CA ASP 93 -4.606 8.639 12.348 1.00 0.00 C ATOM 735 C ASP 93 -3.535 7.738 11.712 1.00 0.00 C ATOM 736 O ASP 93 -3.800 6.633 11.289 1.00 0.00 O ATOM 737 CB ASP 93 -4.887 9.821 11.392 1.00 0.00 C ATOM 738 CG ASP 93 -6.167 10.625 11.571 1.00 0.00 C ATOM 739 OD1 ASP 93 -6.984 10.265 12.439 1.00 0.00 O ATOM 740 OD2 ASP 93 -6.358 11.528 10.718 1.00 0.00 O ATOM 741 N ALA 94 -2.268 8.239 11.610 1.00 0.00 N ATOM 742 CA ALA 94 -1.121 7.488 11.109 1.00 0.00 C ATOM 743 C ALA 94 -0.786 6.167 11.848 1.00 0.00 C ATOM 744 O ALA 94 -0.656 5.157 11.142 1.00 0.00 O ATOM 745 CB ALA 94 0.070 8.445 11.184 1.00 0.00 C ATOM 746 N ILE 95 -0.530 6.136 13.168 1.00 0.00 N ATOM 747 CA ILE 95 -0.127 4.888 13.826 1.00 0.00 C ATOM 748 C ILE 95 -1.235 4.217 14.653 1.00 0.00 C ATOM 749 O ILE 95 -1.187 2.970 14.677 1.00 0.00 O ATOM 750 CB ILE 95 1.145 5.158 14.669 1.00 0.00 C ATOM 751 CG1 ILE 95 2.303 5.694 13.795 1.00 0.00 C ATOM 752 CG2 ILE 95 1.646 3.914 15.428 1.00 0.00 C ATOM 753 CD1 ILE 95 2.748 4.777 12.666 1.00 0.00 C ATOM 754 N THR 96 -2.144 4.936 15.313 1.00 0.00 N ATOM 755 CA THR 96 -3.170 4.331 16.182 1.00 0.00 C ATOM 756 C THR 96 -4.345 3.649 15.425 1.00 0.00 C ATOM 757 O THR 96 -4.608 2.471 15.684 1.00 0.00 O ATOM 758 CB THR 96 -3.694 5.393 17.159 1.00 0.00 C ATOM 759 OG1 THR 96 -2.612 5.995 17.869 1.00 0.00 O ATOM 760 CG2 THR 96 -4.633 4.826 18.200 1.00 0.00 C ATOM 761 N GLU 97 -4.949 4.319 14.447 1.00 0.00 N ATOM 762 CA GLU 97 -6.062 3.765 13.689 1.00 0.00 C ATOM 763 C GLU 97 -5.695 2.482 12.932 1.00 0.00 C ATOM 764 O GLU 97 -6.264 1.440 13.202 1.00 0.00 O ATOM 765 CB GLU 97 -6.562 4.885 12.734 1.00 0.00 C ATOM 766 CG GLU 97 -7.074 6.114 13.525 1.00 0.00 C ATOM 767 CD GLU 97 -8.317 5.880 14.402 1.00 0.00 C ATOM 768 OE1 GLU 97 -8.579 4.699 14.733 1.00 0.00 O ATOM 769 OE2 GLU 97 -9.002 6.865 14.775 1.00 0.00 O ATOM 770 N ARG 98 -4.652 2.519 12.079 1.00 0.00 N ATOM 771 CA ARG 98 -4.156 1.338 11.356 1.00 0.00 C ATOM 772 C ARG 98 -3.841 0.170 12.288 1.00 0.00 C ATOM 773 O ARG 98 -4.378 -0.886 12.030 1.00 0.00 O ATOM 774 CB ARG 98 -2.923 1.683 10.508 1.00 0.00 C ATOM 775 CG ARG 98 -2.868 0.938 9.179 1.00 0.00 C ATOM 776 CD ARG 98 -1.703 1.256 8.266 1.00 0.00 C ATOM 777 NE ARG 98 -1.715 2.659 7.898 1.00 0.00 N ATOM 778 CZ ARG 98 -1.635 3.066 6.628 1.00 0.00 C ATOM 779 NH1 ARG 98 -1.619 2.193 5.664 1.00 0.00 H ATOM 780 NH2 ARG 98 -1.599 4.401 6.368 1.00 0.00 H ATOM 781 N PHE 99 -3.021 0.402 13.352 1.00 0.00 N ATOM 782 CA PHE 99 -2.762 -0.714 14.291 1.00 0.00 C ATOM 783 C PHE 99 -4.038 -1.309 14.936 1.00 0.00 C ATOM 784 O PHE 99 -4.135 -2.543 14.962 1.00 0.00 O ATOM 785 CB PHE 99 -1.828 -0.203 15.380 1.00 0.00 C ATOM 786 CG PHE 99 -1.624 -1.056 16.622 1.00 0.00 C ATOM 787 CD1 PHE 99 -0.794 -2.203 16.580 1.00 0.00 C ATOM 788 CD2 PHE 99 -2.285 -0.706 17.827 1.00 0.00 C ATOM 789 CE1 PHE 99 -0.624 -3.000 17.730 1.00 0.00 C ATOM 790 CE2 PHE 99 -2.113 -1.498 18.983 1.00 0.00 C ATOM 791 CZ PHE 99 -1.283 -2.641 18.928 1.00 0.00 C ATOM 792 N LEU 100 -4.967 -0.496 15.483 1.00 0.00 N ATOM 793 CA LEU 100 -6.258 -1.041 15.958 1.00 0.00 C ATOM 794 C LEU 100 -7.138 -1.765 14.916 1.00 0.00 C ATOM 795 O LEU 100 -7.635 -2.841 15.196 1.00 0.00 O ATOM 796 CB LEU 100 -7.111 0.066 16.594 1.00 0.00 C ATOM 797 CG LEU 100 -6.538 0.666 17.877 1.00 0.00 C ATOM 798 CD1 LEU 100 -7.427 1.805 18.381 1.00 0.00 C ATOM 799 CD2 LEU 100 -6.399 -0.390 18.973 1.00 0.00 C ATOM 800 N GLU 101 -7.494 -1.072 13.827 1.00 0.00 N ATOM 801 CA GLU 101 -8.189 -1.599 12.662 1.00 0.00 C ATOM 802 C GLU 101 -7.579 -2.941 12.220 1.00 0.00 C ATOM 803 O GLU 101 -8.318 -3.927 12.160 1.00 0.00 O ATOM 804 CB GLU 101 -8.262 -0.572 11.532 1.00 0.00 C ATOM 805 CG GLU 101 -9.075 0.666 11.997 1.00 0.00 C ATOM 806 CD GLU 101 -10.431 0.325 12.614 1.00 0.00 C ATOM 807 OE1 GLU 101 -11.094 -0.594 12.120 1.00 0.00 O ATOM 808 OE2 GLU 101 -10.688 0.761 13.756 1.00 0.00 O ATOM 809 N GLU 102 -6.250 -2.986 12.020 1.00 0.00 N ATOM 810 CA GLU 102 -5.534 -4.229 11.739 1.00 0.00 C ATOM 811 C GLU 102 -5.754 -5.281 12.864 1.00 0.00 C ATOM 812 O GLU 102 -6.034 -6.458 12.547 1.00 0.00 O ATOM 813 CB GLU 102 -4.024 -3.919 11.604 1.00 0.00 C ATOM 814 CG GLU 102 -3.246 -4.896 10.690 1.00 0.00 C ATOM 815 CD GLU 102 -1.772 -4.541 10.544 1.00 0.00 C ATOM 816 OE1 GLU 102 -1.077 -4.407 11.575 1.00 0.00 O ATOM 817 OE2 GLU 102 -1.367 -4.346 9.372 1.00 0.00 O ATOM 818 N ALA 103 -5.661 -4.883 14.143 1.00 0.00 N ATOM 819 CA ALA 103 -5.848 -5.799 15.266 1.00 0.00 C ATOM 820 C ALA 103 -7.226 -6.446 15.187 1.00 0.00 C ATOM 821 O ALA 103 -7.273 -7.667 15.350 1.00 0.00 O ATOM 822 CB ALA 103 -5.648 -4.989 16.546 1.00 0.00 C ATOM 823 N LYS 104 -8.274 -5.693 14.804 1.00 0.00 N ATOM 824 CA LYS 104 -9.634 -6.219 14.624 1.00 0.00 C ATOM 825 C LYS 104 -9.696 -7.398 13.620 1.00 0.00 C ATOM 826 O LYS 104 -10.165 -8.471 13.992 1.00 0.00 O ATOM 827 CB LYS 104 -10.560 -5.084 14.107 1.00 0.00 C ATOM 828 CG LYS 104 -10.823 -3.957 15.094 1.00 0.00 C ATOM 829 CD LYS 104 -11.481 -2.715 14.426 1.00 0.00 C ATOM 830 CE LYS 104 -11.579 -1.516 15.342 1.00 0.00 C ATOM 831 NZ LYS 104 -10.220 -0.894 15.555 1.00 0.00 N ATOM 832 N SER 105 -9.253 -7.218 12.361 1.00 0.00 N ATOM 833 CA SER 105 -9.224 -8.298 11.365 1.00 0.00 C ATOM 834 C SER 105 -8.369 -9.490 11.873 1.00 0.00 C ATOM 835 O SER 105 -8.848 -10.593 11.764 1.00 0.00 O ATOM 836 CB SER 105 -8.666 -7.821 10.021 1.00 0.00 C ATOM 837 OG SER 105 -9.570 -6.969 9.322 1.00 0.00 O ATOM 838 N ILE 106 -7.141 -9.317 12.375 1.00 0.00 N ATOM 839 CA ILE 106 -6.304 -10.393 12.852 1.00 0.00 C ATOM 840 C ILE 106 -7.043 -11.085 13.996 1.00 0.00 C ATOM 841 O ILE 106 -7.031 -12.302 14.093 1.00 0.00 O ATOM 842 CB ILE 106 -4.977 -9.718 13.282 1.00 0.00 C ATOM 843 CG1 ILE 106 -4.221 -9.203 12.019 1.00 0.00 C ATOM 844 CG2 ILE 106 -4.029 -10.671 14.056 1.00 0.00 C ATOM 845 CD1 ILE 106 -3.339 -7.999 12.327 1.00 0.00 C ATOM 846 N GLY 107 -7.724 -10.391 14.902 1.00 0.00 N ATOM 847 CA GLY 107 -8.455 -10.993 15.995 1.00 0.00 C ATOM 848 C GLY 107 -7.780 -10.730 17.357 1.00 0.00 C ATOM 849 O GLY 107 -8.199 -11.307 18.337 1.00 0.00 O ATOM 850 N LEU 108 -6.727 -9.897 17.483 1.00 0.00 N ATOM 851 CA LEU 108 -6.165 -9.537 18.800 1.00 0.00 C ATOM 852 C LEU 108 -7.094 -8.637 19.675 1.00 0.00 C ATOM 853 O LEU 108 -7.439 -7.525 19.272 1.00 0.00 O ATOM 854 CB LEU 108 -4.828 -8.796 18.578 1.00 0.00 C ATOM 855 CG LEU 108 -3.745 -9.699 17.997 1.00 0.00 C ATOM 856 CD1 LEU 108 -2.532 -8.887 17.554 1.00 0.00 C ATOM 857 CD2 LEU 108 -3.303 -10.756 19.008 1.00 0.00 C ATOM 858 N ASP 109 -7.400 -9.089 20.898 1.00 0.00 N ATOM 859 CA ASP 109 -8.063 -8.316 21.943 1.00 0.00 C ATOM 860 C ASP 109 -7.298 -7.067 22.295 1.00 0.00 C ATOM 861 O ASP 109 -6.051 -7.093 22.247 1.00 0.00 O ATOM 862 CB ASP 109 -8.288 -9.173 23.198 1.00 0.00 C ATOM 863 CG ASP 109 -9.342 -10.232 22.981 1.00 0.00 C ATOM 864 OD1 ASP 109 -9.286 -11.276 23.660 1.00 0.00 O ATOM 865 OD2 ASP 109 -10.166 -10.048 22.063 1.00 0.00 O ATOM 866 N ASP 110 -8.044 -6.019 22.658 1.00 0.00 N ATOM 867 CA ASP 110 -7.476 -4.711 23.008 1.00 0.00 C ATOM 868 C ASP 110 -6.388 -4.895 24.109 1.00 0.00 C ATOM 869 O ASP 110 -5.318 -4.295 24.095 1.00 0.00 O ATOM 870 CB ASP 110 -8.607 -3.808 23.529 1.00 0.00 C ATOM 871 CG ASP 110 -8.295 -2.339 23.799 1.00 0.00 C ATOM 872 OD1 ASP 110 -8.513 -1.508 22.881 1.00 0.00 O ATOM 873 OD2 ASP 110 -7.936 -2.052 24.961 1.00 0.00 O ATOM 874 N GLN 111 -6.671 -5.869 25.025 1.00 0.00 N ATOM 875 CA GLN 111 -5.728 -6.253 26.101 1.00 0.00 C ATOM 876 C GLN 111 -4.334 -6.707 25.567 1.00 0.00 C ATOM 877 O GLN 111 -3.319 -6.193 26.053 1.00 0.00 O ATOM 878 CB GLN 111 -6.245 -7.398 27.011 1.00 0.00 C ATOM 879 CG GLN 111 -7.638 -7.980 26.791 1.00 0.00 C ATOM 880 CD GLN 111 -8.783 -6.984 26.942 1.00 0.00 C ATOM 881 OE1 GLN 111 -8.848 -6.239 27.915 1.00 0.00 O ATOM 882 NE2 GLN 111 -9.715 -7.011 25.992 1.00 0.00 N ATOM 883 N THR 112 -4.238 -7.726 24.680 1.00 0.00 N ATOM 884 CA THR 112 -2.961 -8.104 24.023 1.00 0.00 C ATOM 885 C THR 112 -2.263 -6.961 23.256 1.00 0.00 C ATOM 886 O THR 112 -1.067 -6.850 23.288 1.00 0.00 O ATOM 887 CB THR 112 -3.138 -9.331 23.082 1.00 0.00 C ATOM 888 OG1 THR 112 -3.678 -10.435 23.797 1.00 0.00 O ATOM 889 CG2 THR 112 -1.843 -9.787 22.484 1.00 0.00 C ATOM 890 N ALA 113 -3.043 -6.168 22.502 1.00 0.00 N ATOM 891 CA ALA 113 -2.551 -4.912 21.903 1.00 0.00 C ATOM 892 C ALA 113 -1.676 -3.984 22.776 1.00 0.00 C ATOM 893 O ALA 113 -0.589 -3.606 22.280 1.00 0.00 O ATOM 894 CB ALA 113 -3.747 -4.093 21.453 1.00 0.00 C ATOM 895 N ILE 114 -2.100 -3.572 23.984 1.00 0.00 N ATOM 896 CA ILE 114 -1.230 -2.869 24.948 1.00 0.00 C ATOM 897 C ILE 114 -0.085 -3.789 25.472 1.00 0.00 C ATOM 898 O ILE 114 1.037 -3.321 25.588 1.00 0.00 O ATOM 899 CB ILE 114 -2.050 -2.307 26.118 1.00 0.00 C ATOM 900 CG1 ILE 114 -2.639 -1.017 25.598 1.00 0.00 C ATOM 901 CG2 ILE 114 -1.213 -2.024 27.386 1.00 0.00 C ATOM 902 CD1 ILE 114 -3.607 -0.340 26.580 1.00 0.00 C ATOM 903 N GLU 115 -0.347 -5.069 25.746 1.00 0.00 N ATOM 904 CA GLU 115 0.683 -5.973 26.235 1.00 0.00 C ATOM 905 C GLU 115 1.811 -6.060 25.205 1.00 0.00 C ATOM 906 O GLU 115 2.966 -6.044 25.580 1.00 0.00 O ATOM 907 CB GLU 115 0.100 -7.352 26.496 1.00 0.00 C ATOM 908 CG GLU 115 -0.599 -7.567 27.846 1.00 0.00 C ATOM 909 CD GLU 115 0.420 -7.502 29.010 1.00 0.00 C ATOM 910 OE1 GLU 115 1.599 -7.936 28.794 1.00 0.00 O ATOM 911 OE2 GLU 115 0.096 -6.958 30.089 1.00 0.00 O ATOM 912 N LEU 116 1.459 -6.151 23.901 1.00 0.00 N ATOM 913 CA LEU 116 2.314 -6.042 22.751 1.00 0.00 C ATOM 914 C LEU 116 3.084 -4.672 22.685 1.00 0.00 C ATOM 915 O LEU 116 4.246 -4.704 22.312 1.00 0.00 O ATOM 916 CB LEU 116 1.474 -6.221 21.450 1.00 0.00 C ATOM 917 CG LEU 116 2.280 -6.433 20.175 1.00 0.00 C ATOM 918 CD1 LEU 116 3.182 -7.655 20.306 1.00 0.00 C ATOM 919 CD2 LEU 116 1.343 -6.618 19.001 1.00 0.00 C ATOM 920 N LEU 117 2.481 -3.516 23.044 1.00 0.00 N ATOM 921 CA LEU 117 3.140 -2.185 22.978 1.00 0.00 C ATOM 922 C LEU 117 4.400 -2.255 23.861 1.00 0.00 C ATOM 923 O LEU 117 5.504 -1.941 23.364 1.00 0.00 O ATOM 924 CB LEU 117 2.147 -1.107 23.467 1.00 0.00 C ATOM 925 CG LEU 117 1.519 -0.188 22.400 1.00 0.00 C ATOM 926 CD1 LEU 117 1.044 -0.958 21.164 1.00 0.00 C ATOM 927 CD2 LEU 117 0.341 0.573 23.001 1.00 0.00 C ATOM 928 N ILE 118 4.288 -2.747 25.093 1.00 0.00 N ATOM 929 CA ILE 118 5.443 -2.964 25.940 1.00 0.00 C ATOM 930 C ILE 118 6.354 -4.099 25.499 1.00 0.00 C ATOM 931 O ILE 118 7.552 -4.017 25.726 1.00 0.00 O ATOM 932 CB ILE 118 5.008 -3.149 27.398 1.00 0.00 C ATOM 933 CG1 ILE 118 6.214 -3.153 28.318 1.00 0.00 C ATOM 934 CG2 ILE 118 4.194 -4.407 27.687 1.00 0.00 C ATOM 935 CD1 ILE 118 6.971 -1.838 28.336 1.00 0.00 C ATOM 936 N LYS 119 5.824 -5.140 24.818 1.00 0.00 N ATOM 937 CA LYS 119 6.634 -6.240 24.299 1.00 0.00 C ATOM 938 C LYS 119 7.636 -5.682 23.308 1.00 0.00 C ATOM 939 O LYS 119 8.815 -5.891 23.488 1.00 0.00 O ATOM 940 CB LYS 119 5.833 -7.347 23.631 1.00 0.00 C ATOM 941 CG LYS 119 4.894 -7.979 24.650 1.00 0.00 C ATOM 942 CD LYS 119 5.374 -8.487 26.026 1.00 0.00 C ATOM 943 CE LYS 119 4.153 -8.577 26.948 1.00 0.00 C ATOM 944 NZ LYS 119 4.361 -9.094 28.317 1.00 0.00 N ATOM 945 N ARG 120 7.139 -4.972 22.260 1.00 0.00 N ATOM 946 CA ARG 120 7.965 -4.223 21.300 1.00 0.00 C ATOM 947 C ARG 120 8.924 -3.160 21.921 1.00 0.00 C ATOM 948 O ARG 120 10.108 -3.136 21.580 1.00 0.00 O ATOM 949 CB ARG 120 7.073 -3.567 20.214 1.00 0.00 C ATOM 950 CG ARG 120 6.406 -4.641 19.339 1.00 0.00 C ATOM 951 CD ARG 120 7.447 -5.238 18.356 1.00 0.00 C ATOM 952 NE ARG 120 7.896 -4.302 17.317 1.00 0.00 N ATOM 953 CZ ARG 120 9.081 -4.142 16.744 1.00 0.00 C ATOM 954 NH1 ARG 120 10.000 -5.093 16.936 1.00 0.00 H ATOM 955 NH2 ARG 120 9.357 -2.963 16.141 1.00 0.00 H ATOM 956 N SER 121 8.406 -2.311 22.826 1.00 0.00 N ATOM 957 CA SER 121 9.180 -1.251 23.480 1.00 0.00 C ATOM 958 C SER 121 10.405 -1.879 24.236 1.00 0.00 C ATOM 959 O SER 121 11.533 -1.506 23.990 1.00 0.00 O ATOM 960 CB SER 121 8.295 -0.503 24.473 1.00 0.00 C ATOM 961 OG SER 121 7.291 0.270 23.820 1.00 0.00 O ATOM 962 N ARG 122 10.149 -2.964 24.996 1.00 0.00 N ATOM 963 CA ARG 122 11.141 -3.667 25.796 1.00 0.00 C ATOM 964 C ARG 122 12.143 -4.315 24.876 1.00 0.00 C ATOM 965 O ARG 122 13.325 -4.152 25.150 1.00 0.00 O ATOM 966 CB ARG 122 10.432 -4.730 26.659 1.00 0.00 C ATOM 967 CG ARG 122 11.386 -5.632 27.420 1.00 0.00 C ATOM 968 CD ARG 122 10.700 -6.322 28.605 1.00 0.00 C ATOM 969 NE ARG 122 11.604 -7.208 29.309 1.00 0.00 N ATOM 970 CZ ARG 122 11.844 -7.313 30.612 1.00 0.00 C ATOM 971 NH1 ARG 122 10.961 -6.761 31.439 1.00 0.00 H ATOM 972 NH2 ARG 122 12.944 -7.961 31.066 1.00 0.00 H ATOM 973 N ASN 123 11.774 -4.977 23.767 1.00 0.00 N ATOM 974 CA ASN 123 12.801 -5.481 22.827 1.00 0.00 C ATOM 975 C ASN 123 13.714 -4.361 22.259 1.00 0.00 C ATOM 976 O ASN 123 14.892 -4.640 22.014 1.00 0.00 O ATOM 977 CB ASN 123 12.135 -6.329 21.707 1.00 0.00 C ATOM 978 CG ASN 123 11.493 -5.595 20.508 1.00 0.00 C ATOM 979 OD1 ASN 123 12.160 -4.856 19.777 1.00 0.00 O ATOM 980 ND2 ASN 123 10.197 -5.840 20.225 1.00 0.00 N TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 313 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 21.10 92.1 76 100.0 76 ARMSMC SECONDARY STRUCTURE . . 11.61 98.4 64 100.0 64 ARMSMC SURFACE . . . . . . . . 21.53 91.7 72 100.0 72 ARMSMC BURIED . . . . . . . . 10.89 100.0 4 100.0 4 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 94.63 29.4 34 100.0 34 ARMSSC1 RELIABLE SIDE CHAINS . 94.63 29.4 34 100.0 34 ARMSSC1 SECONDARY STRUCTURE . . 89.14 32.1 28 100.0 28 ARMSSC1 SURFACE . . . . . . . . 94.63 29.4 34 100.0 34 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 83.60 43.3 30 100.0 30 ARMSSC2 RELIABLE SIDE CHAINS . 80.37 47.8 23 100.0 23 ARMSSC2 SECONDARY STRUCTURE . . 85.90 45.8 24 100.0 24 ARMSSC2 SURFACE . . . . . . . . 83.60 43.3 30 100.0 30 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 71.73 42.9 14 100.0 14 ARMSSC3 RELIABLE SIDE CHAINS . 51.67 50.0 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 74.44 38.5 13 100.0 13 ARMSSC3 SURFACE . . . . . . . . 71.73 42.9 14 100.0 14 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 78.25 14.3 7 100.0 7 ARMSSC4 RELIABLE SIDE CHAINS . 78.25 14.3 7 100.0 7 ARMSSC4 SECONDARY STRUCTURE . . 82.26 16.7 6 100.0 6 ARMSSC4 SURFACE . . . . . . . . 78.25 14.3 7 100.0 7 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 2.06 (Number of atoms: 39) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 2.06 39 100.0 39 CRMSCA CRN = ALL/NP . . . . . 0.0527 CRMSCA SECONDARY STRUCTURE . . 1.99 32 100.0 32 CRMSCA SURFACE . . . . . . . . 2.09 37 100.0 37 CRMSCA BURIED . . . . . . . . 1.27 2 100.0 2 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 2.10 194 100.0 194 CRMSMC SECONDARY STRUCTURE . . 2.01 160 100.0 160 CRMSMC SURFACE . . . . . . . . 2.14 184 100.0 184 CRMSMC BURIED . . . . . . . . 1.29 10 100.0 10 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 4.07 157 100.0 157 CRMSSC RELIABLE SIDE CHAINS . 4.02 139 100.0 139 CRMSSC SECONDARY STRUCTURE . . 3.84 130 100.0 130 CRMSSC SURFACE . . . . . . . . 4.09 155 100.0 155 CRMSSC BURIED . . . . . . . . 1.58 2 100.0 2 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 3.19 313 100.0 313 CRMSALL SECONDARY STRUCTURE . . 3.02 258 100.0 258 CRMSALL SURFACE . . . . . . . . 3.23 303 100.0 303 CRMSALL BURIED . . . . . . . . 1.29 10 100.0 10 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.693 1.000 0.500 39 100.0 39 ERRCA SECONDARY STRUCTURE . . 1.654 1.000 0.500 32 100.0 32 ERRCA SURFACE . . . . . . . . 1.720 1.000 0.500 37 100.0 37 ERRCA BURIED . . . . . . . . 1.186 1.000 0.500 2 100.0 2 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.722 1.000 0.500 194 100.0 194 ERRMC SECONDARY STRUCTURE . . 1.647 1.000 0.500 160 100.0 160 ERRMC SURFACE . . . . . . . . 1.750 1.000 0.500 184 100.0 184 ERRMC BURIED . . . . . . . . 1.198 1.000 0.500 10 100.0 10 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.305 1.000 0.500 157 100.0 157 ERRSC RELIABLE SIDE CHAINS . 3.235 1.000 0.500 139 100.0 139 ERRSC SECONDARY STRUCTURE . . 3.091 1.000 0.500 130 100.0 130 ERRSC SURFACE . . . . . . . . 3.329 1.000 0.500 155 100.0 155 ERRSC BURIED . . . . . . . . 1.445 1.000 0.500 2 100.0 2 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.458 1.000 0.500 313 100.0 313 ERRALL SECONDARY STRUCTURE . . 2.319 1.000 0.500 258 100.0 258 ERRALL SURFACE . . . . . . . . 2.500 1.000 0.500 303 100.0 303 ERRALL BURIED . . . . . . . . 1.198 1.000 0.500 10 100.0 10 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 12 30 33 38 39 39 39 DISTCA CA (P) 30.77 76.92 84.62 97.44 100.00 39 DISTCA CA (RMS) 0.74 1.21 1.40 1.90 2.06 DISTCA ALL (N) 69 180 229 276 311 313 313 DISTALL ALL (P) 22.04 57.51 73.16 88.18 99.36 313 DISTALL ALL (RMS) 0.75 1.23 1.60 2.17 3.08 DISTALL END of the results output