####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 39 ( 313), selected 39 , name T0586TS117_1-D2 # Molecule2: number of CA atoms 39 ( 313), selected 39 , name T0586-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0586TS117_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 39 85 - 123 2.32 2.32 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 34 85 - 118 1.79 2.64 LCS_AVERAGE: 80.60 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 85 - 109 0.95 2.85 LCS_AVERAGE: 50.89 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 39 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT D 85 D 85 25 34 39 9 23 24 27 31 33 35 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT Q 86 Q 86 25 34 39 10 23 23 27 31 33 35 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 87 L 87 25 34 39 9 23 23 27 31 33 35 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 88 K 88 25 34 39 9 23 23 27 31 33 35 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 89 K 89 25 34 39 9 23 24 27 31 33 35 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 90 E 90 25 34 39 17 23 24 27 31 33 35 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 91 L 91 25 34 39 17 23 24 27 31 33 35 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 92 A 92 25 34 39 17 23 24 27 31 33 35 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT D 93 D 93 25 34 39 17 23 24 27 31 33 35 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 94 A 94 25 34 39 17 23 24 27 31 33 35 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 95 I 95 25 34 39 17 23 24 27 31 33 35 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT T 96 T 96 25 34 39 17 23 24 27 31 33 35 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 97 E 97 25 34 39 17 23 24 27 31 33 35 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT R 98 R 98 25 34 39 17 23 24 27 31 33 35 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT F 99 F 99 25 34 39 17 23 24 27 31 33 35 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 100 L 100 25 34 39 17 23 24 27 31 33 35 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 101 E 101 25 34 39 17 23 24 27 31 33 35 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 102 E 102 25 34 39 17 23 24 27 31 33 35 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 103 A 103 25 34 39 17 23 24 27 31 33 35 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 104 K 104 25 34 39 17 23 24 27 31 33 35 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT S 105 S 105 25 34 39 17 23 24 27 31 33 35 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 106 I 106 25 34 39 16 23 24 27 31 33 35 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT G 107 G 107 25 34 39 17 23 24 27 31 33 35 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 108 L 108 25 34 39 5 20 24 27 31 33 35 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT D 109 D 109 25 34 39 5 14 24 27 31 33 35 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT D 110 D 110 13 34 39 5 9 18 27 31 33 35 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT Q 111 Q 111 13 34 39 5 9 16 25 29 33 35 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT T 112 T 112 13 34 39 10 14 24 27 31 33 35 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 113 A 113 11 34 39 10 11 11 13 25 30 33 35 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 114 I 114 11 34 39 10 11 11 11 23 33 34 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 115 E 115 11 34 39 10 11 18 27 31 33 35 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 116 L 116 11 34 39 10 11 11 11 18 32 35 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 117 L 117 11 34 39 10 14 24 27 31 33 35 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 118 I 118 11 34 39 10 11 11 24 31 33 35 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 119 K 119 11 14 39 10 11 11 11 12 23 32 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT R 120 R 120 11 14 39 10 11 11 11 12 14 32 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT S 121 S 121 11 14 39 10 11 18 27 31 33 35 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT R 122 R 122 11 14 39 10 11 11 15 18 23 35 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT N 123 N 123 0 14 39 0 0 3 15 18 23 35 38 39 39 39 39 39 39 39 39 39 39 39 39 LCS_AVERAGE LCS_A: 77.16 ( 50.89 80.60 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 17 23 24 27 31 33 35 38 39 39 39 39 39 39 39 39 39 39 39 39 GDT PERCENT_AT 43.59 58.97 61.54 69.23 79.49 84.62 89.74 97.44 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.32 0.62 1.02 1.16 1.48 1.65 1.99 2.22 2.32 2.32 2.32 2.32 2.32 2.32 2.32 2.32 2.32 2.32 2.32 2.32 GDT RMS_ALL_AT 3.77 3.88 2.85 2.79 2.47 2.50 2.33 2.32 2.32 2.32 2.32 2.32 2.32 2.32 2.32 2.32 2.32 2.32 2.32 2.32 # Checking swapping # possible swapping detected: D 85 D 85 # possible swapping detected: E 101 E 101 # possible swapping detected: E 102 E 102 # possible swapping detected: D 109 D 109 # possible swapping detected: E 115 E 115 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA D 85 D 85 0.783 0 0.080 0.096 1.413 90.595 92.976 LGA Q 86 Q 86 1.231 0 0.113 1.546 5.651 83.690 64.339 LGA L 87 L 87 2.094 0 0.086 0.132 4.242 70.833 58.869 LGA K 88 K 88 1.804 0 0.058 0.998 10.182 77.143 47.196 LGA K 89 K 89 0.833 0 0.073 0.610 2.057 90.476 81.746 LGA E 90 E 90 0.274 0 0.045 0.107 0.926 100.000 95.767 LGA L 91 L 91 0.886 0 0.042 0.076 1.823 88.333 83.810 LGA A 92 A 92 1.493 0 0.083 0.094 1.786 81.429 79.714 LGA D 93 D 93 1.160 0 0.046 0.082 2.068 83.690 78.333 LGA A 94 A 94 0.406 0 0.043 0.062 0.574 92.857 94.286 LGA I 95 I 95 0.996 0 0.074 0.091 2.067 85.952 78.393 LGA T 96 T 96 1.553 0 0.060 0.054 1.993 77.143 75.306 LGA E 97 E 97 1.206 0 0.042 0.586 2.279 81.429 76.772 LGA R 98 R 98 0.703 0 0.050 1.259 5.159 90.476 78.831 LGA F 99 F 99 1.517 0 0.086 0.114 3.514 75.000 61.126 LGA L 100 L 100 1.978 0 0.052 0.104 2.314 70.833 68.810 LGA E 101 E 101 1.666 0 0.031 0.985 4.447 72.857 62.381 LGA E 102 E 102 1.645 0 0.074 0.898 3.595 72.857 67.778 LGA A 103 A 103 2.076 0 0.080 0.094 2.505 64.881 64.857 LGA K 104 K 104 2.336 0 0.078 0.141 2.657 62.857 63.069 LGA S 105 S 105 2.000 0 0.104 0.701 2.283 66.786 68.889 LGA I 106 I 106 2.403 0 0.108 0.170 2.885 64.762 62.857 LGA G 107 G 107 2.493 0 0.086 0.086 2.573 64.881 64.881 LGA L 108 L 108 1.660 0 0.056 1.385 3.144 79.405 72.321 LGA D 109 D 109 0.798 0 0.039 1.255 5.088 83.810 67.857 LGA D 110 D 110 2.245 0 0.079 0.137 3.428 61.190 61.190 LGA Q 111 Q 111 3.194 0 0.159 0.879 4.344 48.571 45.026 LGA T 112 T 112 2.518 0 0.390 1.148 3.481 57.262 58.367 LGA A 113 A 113 4.811 0 0.085 0.101 6.157 35.714 32.000 LGA I 114 I 114 3.853 0 0.066 0.118 7.654 54.048 37.262 LGA E 115 E 115 1.302 0 0.057 0.744 4.106 79.286 67.354 LGA L 116 L 116 3.168 0 0.046 1.313 8.808 57.500 39.167 LGA L 117 L 117 2.800 0 0.073 1.368 7.620 65.000 48.988 LGA I 118 I 118 1.848 0 0.056 0.058 5.024 69.048 54.107 LGA K 119 K 119 3.894 0 0.140 1.045 7.472 40.952 30.582 LGA R 120 R 120 4.192 0 0.060 0.850 12.688 43.571 21.818 LGA S 121 S 121 1.285 0 0.073 0.570 2.997 70.952 71.905 LGA R 122 R 122 3.861 0 0.698 1.384 8.330 38.690 35.108 LGA N 123 N 123 4.103 0 0.302 1.372 8.019 48.810 33.214 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 39 156 156 100.00 313 313 100.00 39 SUMMARY(RMSD_GDC): 2.315 2.255 3.274 70.348 62.750 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 39 39 4.0 38 2.22 81.410 83.871 1.640 LGA_LOCAL RMSD: 2.217 Number of atoms: 38 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.320 Number of assigned atoms: 39 Std_ASGN_ATOMS RMSD: 2.315 Standard rmsd on all 39 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.277656 * X + -0.865219 * Y + 0.417496 * Z + 19.392868 Y_new = -0.543343 * X + -0.499830 * Y + -0.674498 * Z + 25.257772 Z_new = 0.792266 * X + -0.039565 * Y + -0.608892 * Z + 19.228390 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.098376 -0.914514 -3.076705 [DEG: -62.9323 -52.3978 -176.2822 ] ZXZ: 0.554253 2.225459 1.620694 [DEG: 31.7564 127.5094 92.8589 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0586TS117_1-D2 REMARK 2: T0586-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0586TS117_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 39 39 4.0 38 2.22 83.871 2.32 REMARK ---------------------------------------------------------- MOLECULE T0586TS117_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0586 REMARK MODEL 1 REMARK PARENT N/A ATOM 668 N ASP 85 0.805 21.284 15.835 1.00 0.00 N ATOM 669 CA ASP 85 0.899 20.196 16.737 1.00 0.00 C ATOM 670 C ASP 85 -0.345 19.373 16.686 1.00 0.00 C ATOM 671 O ASP 85 -0.290 18.190 17.011 1.00 0.00 O ATOM 672 CB ASP 85 1.089 20.701 18.169 1.00 0.00 C ATOM 673 CG ASP 85 2.475 21.269 18.407 1.00 0.00 C ATOM 674 OD1 ASP 85 3.361 21.051 17.554 1.00 0.00 O ATOM 675 OD2 ASP 85 2.675 21.931 19.447 1.00 0.00 O ATOM 676 N GLN 86 -1.489 19.948 16.258 1.00 0.00 N ATOM 677 CA GLN 86 -2.744 19.257 16.393 1.00 0.00 C ATOM 678 C GLN 86 -2.848 18.391 15.180 1.00 0.00 C ATOM 679 O GLN 86 -3.125 17.204 15.294 1.00 0.00 O ATOM 680 CB GLN 86 -3.901 20.255 16.458 1.00 0.00 C ATOM 681 CG GLN 86 -3.882 21.149 17.688 1.00 0.00 C ATOM 682 CD GLN 86 -5.029 22.140 17.706 1.00 0.00 C ATOM 683 OE1 GLN 86 -5.805 22.224 16.754 1.00 0.00 O ATOM 684 NE2 GLN 86 -5.139 22.895 18.793 1.00 0.00 N ATOM 685 N LEU 87 -2.606 18.964 13.986 1.00 0.00 N ATOM 686 CA LEU 87 -2.628 18.241 12.745 1.00 0.00 C ATOM 687 C LEU 87 -1.613 17.132 12.703 1.00 0.00 C ATOM 688 O LEU 87 -1.812 16.117 12.043 1.00 0.00 O ATOM 689 CB LEU 87 -2.329 19.177 11.573 1.00 0.00 C ATOM 690 CG LEU 87 -2.431 18.566 10.174 1.00 0.00 C ATOM 691 CD1 LEU 87 -3.838 18.053 9.913 1.00 0.00 C ATOM 692 CD2 LEU 87 -2.096 19.601 9.110 1.00 0.00 C ATOM 693 N LYS 88 -0.459 17.299 13.372 1.00 0.00 N ATOM 694 CA LYS 88 0.566 16.302 13.329 1.00 0.00 C ATOM 695 C LYS 88 0.290 15.217 14.310 1.00 0.00 C ATOM 696 O LYS 88 0.659 14.062 14.090 1.00 0.00 O ATOM 697 CB LYS 88 1.926 16.917 13.665 1.00 0.00 C ATOM 698 CG LYS 88 2.442 17.893 12.620 1.00 0.00 C ATOM 699 CD LYS 88 2.743 17.188 11.307 1.00 0.00 C ATOM 700 CE LYS 88 3.306 18.154 10.278 1.00 0.00 C ATOM 701 NZ LYS 88 3.652 17.469 9.003 1.00 0.00 N ATOM 702 N LYS 89 -0.389 15.584 15.407 1.00 0.00 N ATOM 703 CA LYS 89 -0.879 14.645 16.369 1.00 0.00 C ATOM 704 C LYS 89 -1.900 13.813 15.680 1.00 0.00 C ATOM 705 O LYS 89 -2.035 12.649 16.028 1.00 0.00 O ATOM 706 CB LYS 89 -1.504 15.374 17.560 1.00 0.00 C ATOM 707 CG LYS 89 -2.013 14.452 18.656 1.00 0.00 C ATOM 708 CD LYS 89 -2.542 15.243 19.842 1.00 0.00 C ATOM 709 CE LYS 89 -3.031 14.320 20.945 1.00 0.00 C ATOM 710 NZ LYS 89 -3.551 15.081 22.115 1.00 0.00 N ATOM 711 N GLU 90 -2.644 14.398 14.715 1.00 0.00 N ATOM 712 CA GLU 90 -3.708 13.751 14.013 1.00 0.00 C ATOM 713 C GLU 90 -3.140 12.676 13.158 1.00 0.00 C ATOM 714 O GLU 90 -3.745 11.621 13.011 1.00 0.00 O ATOM 715 CB GLU 90 -4.456 14.754 13.132 1.00 0.00 C ATOM 716 CG GLU 90 -5.277 15.771 13.908 1.00 0.00 C ATOM 717 CD GLU 90 -5.903 16.820 13.011 1.00 0.00 C ATOM 718 OE1 GLU 90 -5.636 16.795 11.791 1.00 0.00 O ATOM 719 OE2 GLU 90 -6.661 17.668 13.527 1.00 0.00 O ATOM 720 N LEU 91 -1.969 12.930 12.542 1.00 0.00 N ATOM 721 CA LEU 91 -1.380 11.991 11.638 1.00 0.00 C ATOM 722 C LEU 91 -0.882 10.843 12.461 1.00 0.00 C ATOM 723 O LEU 91 -1.027 9.682 12.082 1.00 0.00 O ATOM 724 CB LEU 91 -0.222 12.636 10.874 1.00 0.00 C ATOM 725 CG LEU 91 -0.597 13.719 9.861 1.00 0.00 C ATOM 726 CD1 LEU 91 0.648 14.395 9.310 1.00 0.00 C ATOM 727 CD2 LEU 91 -1.368 13.120 8.695 1.00 0.00 C ATOM 728 N ALA 92 -0.305 11.155 13.639 1.00 0.00 N ATOM 729 CA ALA 92 0.170 10.140 14.537 1.00 0.00 C ATOM 730 C ALA 92 -0.980 9.348 15.114 1.00 0.00 C ATOM 731 O ALA 92 -0.811 8.182 15.462 1.00 0.00 O ATOM 732 CB ALA 92 0.940 10.769 15.688 1.00 0.00 C ATOM 733 N ASP 93 -2.158 9.980 15.266 1.00 0.00 N ATOM 734 CA ASP 93 -3.364 9.377 15.770 1.00 0.00 C ATOM 735 C ASP 93 -3.892 8.434 14.732 1.00 0.00 C ATOM 736 O ASP 93 -4.334 7.336 15.051 1.00 0.00 O ATOM 737 CB ASP 93 -4.415 10.449 16.067 1.00 0.00 C ATOM 738 CG ASP 93 -4.085 11.262 17.304 1.00 0.00 C ATOM 739 OD1 ASP 93 -3.188 10.845 18.066 1.00 0.00 O ATOM 740 OD2 ASP 93 -4.725 12.315 17.510 1.00 0.00 O ATOM 741 N ALA 94 -3.821 8.798 13.439 1.00 0.00 N ATOM 742 CA ALA 94 -4.144 7.868 12.391 1.00 0.00 C ATOM 743 C ALA 94 -3.296 6.630 12.366 1.00 0.00 C ATOM 744 O ALA 94 -3.789 5.559 12.019 1.00 0.00 O ATOM 745 CB ALA 94 -3.978 8.526 11.029 1.00 0.00 C ATOM 746 N ILE 95 -1.990 6.720 12.694 1.00 0.00 N ATOM 747 CA ILE 95 -1.152 5.562 12.550 1.00 0.00 C ATOM 748 C ILE 95 -1.401 4.648 13.723 1.00 0.00 C ATOM 749 O ILE 95 -1.237 3.434 13.603 1.00 0.00 O ATOM 750 CB ILE 95 0.339 5.943 12.517 1.00 0.00 C ATOM 751 CG1 ILE 95 0.657 6.744 11.252 1.00 0.00 C ATOM 752 CG2 ILE 95 1.209 4.696 12.531 1.00 0.00 C ATOM 753 CD1 ILE 95 2.034 7.371 11.257 1.00 0.00 C ATOM 754 N THR 96 -1.849 5.202 14.868 1.00 0.00 N ATOM 755 CA THR 96 -1.986 4.406 16.050 1.00 0.00 C ATOM 756 C THR 96 -3.289 3.669 15.859 1.00 0.00 C ATOM 757 O THR 96 -3.437 2.548 16.342 1.00 0.00 O ATOM 758 CB THR 96 -2.027 5.280 17.318 1.00 0.00 C ATOM 759 OG1 THR 96 -3.143 6.175 17.249 1.00 0.00 O ATOM 760 CG2 THR 96 -0.749 6.095 17.444 1.00 0.00 C ATOM 761 N GLU 97 -4.239 4.287 15.115 1.00 0.00 N ATOM 762 CA GLU 97 -5.527 3.741 14.831 1.00 0.00 C ATOM 763 C GLU 97 -5.313 2.518 14.015 1.00 0.00 C ATOM 764 O GLU 97 -5.922 1.483 14.272 1.00 0.00 O ATOM 765 CB GLU 97 -6.378 4.750 14.057 1.00 0.00 C ATOM 766 CG GLU 97 -7.787 4.269 13.751 1.00 0.00 C ATOM 767 CD GLU 97 -8.610 5.306 13.014 1.00 0.00 C ATOM 768 OE1 GLU 97 -8.083 6.408 12.754 1.00 0.00 O ATOM 769 OE2 GLU 97 -9.783 5.018 12.696 1.00 0.00 O ATOM 770 N ARG 98 -4.442 2.624 12.995 1.00 0.00 N ATOM 771 CA ARG 98 -4.366 1.613 11.996 1.00 0.00 C ATOM 772 C ARG 98 -3.605 0.460 12.563 1.00 0.00 C ATOM 773 O ARG 98 -3.911 -0.687 12.256 1.00 0.00 O ATOM 774 CB ARG 98 -3.649 2.141 10.752 1.00 0.00 C ATOM 775 CG ARG 98 -4.436 3.187 9.979 1.00 0.00 C ATOM 776 CD ARG 98 -3.662 3.676 8.766 1.00 0.00 C ATOM 777 NE ARG 98 -4.415 4.665 7.999 1.00 0.00 N ATOM 778 CZ ARG 98 -3.906 5.381 7.002 1.00 0.00 C ATOM 779 NH1 ARG 98 -4.667 6.259 6.361 1.00 0.00 H ATOM 780 NH2 ARG 98 -2.639 5.219 6.648 1.00 0.00 H ATOM 781 N PHE 99 -2.609 0.724 13.428 1.00 0.00 N ATOM 782 CA PHE 99 -1.872 -0.340 14.046 1.00 0.00 C ATOM 783 C PHE 99 -2.736 -1.075 15.051 1.00 0.00 C ATOM 784 O PHE 99 -2.583 -2.281 15.227 1.00 0.00 O ATOM 785 CB PHE 99 -0.646 0.212 14.776 1.00 0.00 C ATOM 786 CG PHE 99 0.267 -0.851 15.319 1.00 0.00 C ATOM 787 CD1 PHE 99 1.071 -1.592 14.470 1.00 0.00 C ATOM 788 CD2 PHE 99 0.320 -1.111 16.677 1.00 0.00 C ATOM 789 CE1 PHE 99 1.910 -2.570 14.969 1.00 0.00 C ATOM 790 CE2 PHE 99 1.159 -2.088 17.176 1.00 0.00 C ATOM 791 CZ PHE 99 1.953 -2.817 16.328 1.00 0.00 C ATOM 792 N LEU 100 -3.690 -0.388 15.713 1.00 0.00 N ATOM 793 CA LEU 100 -4.616 -1.030 16.621 1.00 0.00 C ATOM 794 C LEU 100 -5.503 -1.931 15.804 1.00 0.00 C ATOM 795 O LEU 100 -5.832 -3.033 16.237 1.00 0.00 O ATOM 796 CB LEU 100 -5.463 0.016 17.348 1.00 0.00 C ATOM 797 CG LEU 100 -4.729 0.898 18.361 1.00 0.00 C ATOM 798 CD1 LEU 100 -5.642 2.002 18.874 1.00 0.00 C ATOM 799 CD2 LEU 100 -4.262 0.075 19.552 1.00 0.00 C ATOM 800 N GLU 101 -5.914 -1.479 14.599 1.00 0.00 N ATOM 801 CA GLU 101 -6.787 -2.229 13.743 1.00 0.00 C ATOM 802 C GLU 101 -6.071 -3.462 13.285 1.00 0.00 C ATOM 803 O GLU 101 -6.681 -4.522 13.165 1.00 0.00 O ATOM 804 CB GLU 101 -7.188 -1.395 12.524 1.00 0.00 C ATOM 805 CG GLU 101 -8.120 -0.238 12.844 1.00 0.00 C ATOM 806 CD GLU 101 -8.398 0.636 11.637 1.00 0.00 C ATOM 807 OE1 GLU 101 -7.804 0.379 10.568 1.00 0.00 O ATOM 808 OE2 GLU 101 -9.208 1.579 11.760 1.00 0.00 O ATOM 809 N GLU 102 -4.757 -3.328 13.005 1.00 0.00 N ATOM 810 CA GLU 102 -3.934 -4.369 12.466 1.00 0.00 C ATOM 811 C GLU 102 -3.832 -5.438 13.494 1.00 0.00 C ATOM 812 O GLU 102 -4.016 -6.614 13.197 1.00 0.00 O ATOM 813 CB GLU 102 -2.542 -3.832 12.131 1.00 0.00 C ATOM 814 CG GLU 102 -2.511 -2.880 10.948 1.00 0.00 C ATOM 815 CD GLU 102 -1.144 -2.259 10.734 1.00 0.00 C ATOM 816 OE1 GLU 102 -0.239 -2.519 11.554 1.00 0.00 O ATOM 817 OE2 GLU 102 -0.979 -1.512 9.747 1.00 0.00 O ATOM 818 N ALA 103 -3.542 -5.036 14.740 1.00 0.00 N ATOM 819 CA ALA 103 -3.494 -5.911 15.870 1.00 0.00 C ATOM 820 C ALA 103 -4.765 -6.678 16.062 1.00 0.00 C ATOM 821 O ALA 103 -4.723 -7.831 16.480 1.00 0.00 O ATOM 822 CB ALA 103 -3.248 -5.118 17.144 1.00 0.00 C ATOM 823 N LYS 104 -5.926 -6.079 15.775 1.00 0.00 N ATOM 824 CA LYS 104 -7.164 -6.728 16.085 1.00 0.00 C ATOM 825 C LYS 104 -7.362 -7.763 15.019 1.00 0.00 C ATOM 826 O LYS 104 -7.685 -8.912 15.317 1.00 0.00 O ATOM 827 CB LYS 104 -8.313 -5.718 16.081 1.00 0.00 C ATOM 828 CG LYS 104 -9.663 -6.312 16.450 1.00 0.00 C ATOM 829 CD LYS 104 -10.724 -5.233 16.583 1.00 0.00 C ATOM 830 CE LYS 104 -12.058 -5.820 17.014 1.00 0.00 C ATOM 831 NZ LYS 104 -13.100 -4.768 17.180 1.00 0.00 N ATOM 832 N SER 105 -7.125 -7.370 13.754 1.00 0.00 N ATOM 833 CA SER 105 -7.078 -8.240 12.614 1.00 0.00 C ATOM 834 C SER 105 -6.226 -9.474 12.805 1.00 0.00 C ATOM 835 O SER 105 -6.633 -10.542 12.347 1.00 0.00 O ATOM 836 CB SER 105 -6.505 -7.504 11.401 1.00 0.00 C ATOM 837 OG SER 105 -7.364 -6.455 10.989 1.00 0.00 O ATOM 838 N ILE 106 -5.038 -9.387 13.453 1.00 0.00 N ATOM 839 CA ILE 106 -4.190 -10.544 13.599 1.00 0.00 C ATOM 840 C ILE 106 -4.615 -11.451 14.723 1.00 0.00 C ATOM 841 O ILE 106 -4.060 -12.543 14.842 1.00 0.00 O ATOM 842 CB ILE 106 -2.732 -10.142 13.888 1.00 0.00 C ATOM 843 CG1 ILE 106 -2.635 -9.413 15.229 1.00 0.00 C ATOM 844 CG2 ILE 106 -2.207 -9.219 12.798 1.00 0.00 C ATOM 845 CD1 ILE 106 -1.216 -9.143 15.676 1.00 0.00 C ATOM 846 N GLY 107 -5.578 -11.034 15.571 1.00 0.00 N ATOM 847 CA GLY 107 -6.150 -11.915 16.556 1.00 0.00 C ATOM 848 C GLY 107 -5.855 -11.431 17.943 1.00 0.00 C ATOM 849 O GLY 107 -6.188 -12.119 18.907 1.00 0.00 O ATOM 850 N LEU 108 -5.249 -10.237 18.084 1.00 0.00 N ATOM 851 CA LEU 108 -4.979 -9.702 19.393 1.00 0.00 C ATOM 852 C LEU 108 -6.202 -8.931 19.769 1.00 0.00 C ATOM 853 O LEU 108 -6.384 -7.796 19.332 1.00 0.00 O ATOM 854 CB LEU 108 -3.749 -8.793 19.356 1.00 0.00 C ATOM 855 CG LEU 108 -2.434 -9.448 18.926 1.00 0.00 C ATOM 856 CD1 LEU 108 -1.315 -8.419 18.869 1.00 0.00 C ATOM 857 CD2 LEU 108 -2.030 -10.536 19.908 1.00 0.00 C ATOM 858 N ASP 109 -7.088 -9.572 20.561 1.00 0.00 N ATOM 859 CA ASP 109 -8.251 -8.972 21.159 1.00 0.00 C ATOM 860 C ASP 109 -7.991 -7.740 21.959 1.00 0.00 C ATOM 861 O ASP 109 -6.895 -7.495 22.452 1.00 0.00 O ATOM 862 CB ASP 109 -8.931 -9.956 22.114 1.00 0.00 C ATOM 863 CG ASP 109 -9.609 -11.100 21.387 1.00 0.00 C ATOM 864 OD1 ASP 109 -9.740 -11.020 20.147 1.00 0.00 O ATOM 865 OD2 ASP 109 -10.009 -12.076 22.055 1.00 0.00 O ATOM 866 N ASP 110 -9.055 -6.921 22.112 1.00 0.00 N ATOM 867 CA ASP 110 -8.974 -5.603 22.686 1.00 0.00 C ATOM 868 C ASP 110 -8.575 -5.656 24.123 1.00 0.00 C ATOM 869 O ASP 110 -7.979 -4.711 24.642 1.00 0.00 O ATOM 870 CB ASP 110 -10.329 -4.898 22.600 1.00 0.00 C ATOM 871 CG ASP 110 -10.670 -4.461 21.189 1.00 0.00 C ATOM 872 OD1 ASP 110 -9.770 -4.491 20.324 1.00 0.00 O ATOM 873 OD2 ASP 110 -11.838 -4.087 20.949 1.00 0.00 O ATOM 874 N GLN 111 -8.876 -6.780 24.801 1.00 0.00 N ATOM 875 CA GLN 111 -8.562 -6.954 26.188 1.00 0.00 C ATOM 876 C GLN 111 -7.076 -7.076 26.423 1.00 0.00 C ATOM 877 O GLN 111 -6.653 -6.929 27.568 1.00 0.00 O ATOM 878 CB GLN 111 -9.221 -8.222 26.732 1.00 0.00 C ATOM 879 CG GLN 111 -10.737 -8.144 26.822 1.00 0.00 C ATOM 880 CD GLN 111 -11.357 -9.428 27.339 1.00 0.00 C ATOM 881 OE1 GLN 111 -10.651 -10.382 27.668 1.00 0.00 O ATOM 882 NE2 GLN 111 -12.682 -9.455 27.413 1.00 0.00 N ATOM 883 N THR 112 -6.244 -7.337 25.384 1.00 0.00 N ATOM 884 CA THR 112 -4.840 -7.533 25.590 1.00 0.00 C ATOM 885 C THR 112 -4.083 -6.289 25.184 1.00 0.00 C ATOM 886 O THR 112 -2.985 -6.372 24.631 1.00 0.00 O ATOM 887 CB THR 112 -4.307 -8.715 24.758 1.00 0.00 C ATOM 888 OG1 THR 112 -4.663 -8.532 23.382 1.00 0.00 O ATOM 889 CG2 THR 112 -4.902 -10.024 25.251 1.00 0.00 C ATOM 890 N ALA 113 -4.628 -5.081 25.466 1.00 0.00 N ATOM 891 CA ALA 113 -3.994 -3.852 25.057 1.00 0.00 C ATOM 892 C ALA 113 -2.639 -3.676 25.665 1.00 0.00 C ATOM 893 O ALA 113 -1.767 -3.041 25.073 1.00 0.00 O ATOM 894 CB ALA 113 -4.838 -2.656 25.471 1.00 0.00 C ATOM 895 N ILE 114 -2.449 -4.254 26.864 1.00 0.00 N ATOM 896 CA ILE 114 -1.214 -4.204 27.587 1.00 0.00 C ATOM 897 C ILE 114 -0.239 -4.979 26.752 1.00 0.00 C ATOM 898 O ILE 114 0.877 -4.520 26.536 1.00 0.00 O ATOM 899 CB ILE 114 -1.353 -4.835 28.986 1.00 0.00 C ATOM 900 CG1 ILE 114 -2.270 -3.984 29.866 1.00 0.00 C ATOM 901 CG2 ILE 114 0.006 -4.936 29.662 1.00 0.00 C ATOM 902 CD1 ILE 114 -2.673 -4.657 31.160 1.00 0.00 C ATOM 903 N GLU 115 -0.645 -6.148 26.237 1.00 0.00 N ATOM 904 CA GLU 115 0.281 -7.126 25.739 1.00 0.00 C ATOM 905 C GLU 115 0.742 -6.620 24.405 1.00 0.00 C ATOM 906 O GLU 115 1.919 -6.736 24.074 1.00 0.00 O ATOM 907 CB GLU 115 -0.404 -8.486 25.594 1.00 0.00 C ATOM 908 CG GLU 115 -0.798 -9.126 26.915 1.00 0.00 C ATOM 909 CD GLU 115 -1.530 -10.442 26.729 1.00 0.00 C ATOM 910 OE1 GLU 115 -1.782 -10.823 25.566 1.00 0.00 O ATOM 911 OE2 GLU 115 -1.851 -11.092 27.746 1.00 0.00 O ATOM 912 N LEU 116 -0.182 -6.033 23.617 1.00 0.00 N ATOM 913 CA LEU 116 0.128 -5.337 22.398 1.00 0.00 C ATOM 914 C LEU 116 1.151 -4.269 22.640 1.00 0.00 C ATOM 915 O LEU 116 2.127 -4.182 21.899 1.00 0.00 O ATOM 916 CB LEU 116 -1.127 -4.678 21.824 1.00 0.00 C ATOM 917 CG LEU 116 -0.944 -3.889 20.525 1.00 0.00 C ATOM 918 CD1 LEU 116 -0.493 -4.805 19.398 1.00 0.00 C ATOM 919 CD2 LEU 116 -2.250 -3.230 20.108 1.00 0.00 C ATOM 920 N LEU 117 0.958 -3.431 23.674 1.00 0.00 N ATOM 921 CA LEU 117 1.801 -2.296 23.918 1.00 0.00 C ATOM 922 C LEU 117 3.180 -2.772 24.292 1.00 0.00 C ATOM 923 O LEU 117 4.168 -2.106 23.997 1.00 0.00 O ATOM 924 CB LEU 117 1.240 -1.446 25.060 1.00 0.00 C ATOM 925 CG LEU 117 -0.076 -0.719 24.779 1.00 0.00 C ATOM 926 CD1 LEU 117 -0.597 -0.043 26.038 1.00 0.00 C ATOM 927 CD2 LEU 117 0.116 0.349 23.712 1.00 0.00 C ATOM 928 N ILE 118 3.280 -3.949 24.939 1.00 0.00 N ATOM 929 CA ILE 118 4.535 -4.495 25.354 1.00 0.00 C ATOM 930 C ILE 118 5.290 -4.868 24.125 1.00 0.00 C ATOM 931 O ILE 118 6.461 -4.520 24.002 1.00 0.00 O ATOM 932 CB ILE 118 4.344 -5.741 26.238 1.00 0.00 C ATOM 933 CG1 ILE 118 3.701 -5.357 27.571 1.00 0.00 C ATOM 934 CG2 ILE 118 5.684 -6.403 26.522 1.00 0.00 C ATOM 935 CD1 ILE 118 3.236 -6.542 28.390 1.00 0.00 C ATOM 936 N LYS 119 4.632 -5.554 23.179 1.00 0.00 N ATOM 937 CA LYS 119 5.304 -6.147 22.061 1.00 0.00 C ATOM 938 C LYS 119 5.635 -5.078 21.062 1.00 0.00 C ATOM 939 O LYS 119 6.470 -5.278 20.182 1.00 0.00 O ATOM 940 CB LYS 119 4.411 -7.196 21.396 1.00 0.00 C ATOM 941 CG LYS 119 4.142 -8.419 22.257 1.00 0.00 C ATOM 942 CD LYS 119 3.243 -9.412 21.540 1.00 0.00 C ATOM 943 CE LYS 119 2.995 -10.648 22.390 1.00 0.00 C ATOM 944 NZ LYS 119 2.132 -11.639 21.692 1.00 0.00 N ATOM 945 N ARG 120 4.982 -3.909 21.183 1.00 0.00 N ATOM 946 CA ARG 120 5.257 -2.784 20.351 1.00 0.00 C ATOM 947 C ARG 120 6.514 -2.145 20.834 1.00 0.00 C ATOM 948 O ARG 120 7.268 -1.612 20.022 1.00 0.00 O ATOM 949 CB ARG 120 4.109 -1.775 20.418 1.00 0.00 C ATOM 950 CG ARG 120 4.266 -0.593 19.475 1.00 0.00 C ATOM 951 CD ARG 120 3.039 0.303 19.503 1.00 0.00 C ATOM 952 NE ARG 120 3.158 1.424 18.574 1.00 0.00 N ATOM 953 CZ ARG 120 2.242 2.377 18.432 1.00 0.00 C ATOM 954 NH1 ARG 120 2.436 3.358 17.561 1.00 0.00 H ATOM 955 NH2 ARG 120 1.134 2.345 19.159 1.00 0.00 H ATOM 956 N SER 121 6.752 -2.145 22.160 1.00 0.00 N ATOM 957 CA SER 121 7.804 -1.331 22.675 1.00 0.00 C ATOM 958 C SER 121 9.043 -2.175 22.785 1.00 0.00 C ATOM 959 O SER 121 10.134 -1.609 22.806 1.00 0.00 O ATOM 960 CB SER 121 7.433 -0.784 24.055 1.00 0.00 C ATOM 961 OG SER 121 7.323 -1.830 25.005 1.00 0.00 O ATOM 962 N ARG 122 8.934 -3.527 22.872 1.00 0.00 N ATOM 963 CA ARG 122 10.093 -4.357 23.105 1.00 0.00 C ATOM 964 C ARG 122 9.746 -5.761 22.711 1.00 0.00 C ATOM 965 O ARG 122 8.573 -6.068 22.523 1.00 0.00 O ATOM 966 CB ARG 122 10.492 -4.319 24.581 1.00 0.00 C ATOM 967 CG ARG 122 9.445 -4.897 25.522 1.00 0.00 C ATOM 968 CD ARG 122 9.906 -4.829 26.969 1.00 0.00 C ATOM 969 NE ARG 122 8.883 -5.313 27.892 1.00 0.00 N ATOM 970 CZ ARG 122 8.699 -6.594 28.199 1.00 0.00 C ATOM 971 NH1 ARG 122 7.742 -6.939 29.049 1.00 0.00 H ATOM 972 NH2 ARG 122 9.471 -7.524 27.655 1.00 0.00 H ATOM 973 N ASN 123 10.758 -6.656 22.588 1.00 0.00 N ATOM 974 CA ASN 123 10.556 -8.000 22.099 1.00 0.00 C ATOM 975 C ASN 123 11.852 -8.719 22.390 1.00 0.00 C ATOM 976 O ASN 123 12.632 -8.245 23.218 1.00 0.00 O ATOM 977 CB ASN 123 10.255 -7.985 20.599 1.00 0.00 C ATOM 978 CG ASN 123 11.398 -7.418 19.781 1.00 0.00 C ATOM 979 OD1 ASN 123 12.503 -7.229 20.288 1.00 0.00 O ATOM 980 ND2 ASN 123 11.134 -7.142 18.509 1.00 0.00 N TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 313 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 30.77 89.5 76 100.0 76 ARMSMC SECONDARY STRUCTURE . . 16.76 93.8 64 100.0 64 ARMSMC SURFACE . . . . . . . . 31.51 88.9 72 100.0 72 ARMSMC BURIED . . . . . . . . 11.03 100.0 4 100.0 4 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 73.19 58.8 34 100.0 34 ARMSSC1 RELIABLE SIDE CHAINS . 73.19 58.8 34 100.0 34 ARMSSC1 SECONDARY STRUCTURE . . 66.08 64.3 28 100.0 28 ARMSSC1 SURFACE . . . . . . . . 73.19 58.8 34 100.0 34 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 57.36 70.0 30 100.0 30 ARMSSC2 RELIABLE SIDE CHAINS . 49.12 78.3 23 100.0 23 ARMSSC2 SECONDARY STRUCTURE . . 55.33 75.0 24 100.0 24 ARMSSC2 SURFACE . . . . . . . . 57.36 70.0 30 100.0 30 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 63.27 64.3 14 100.0 14 ARMSSC3 RELIABLE SIDE CHAINS . 57.66 66.7 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 65.65 61.5 13 100.0 13 ARMSSC3 SURFACE . . . . . . . . 63.27 64.3 14 100.0 14 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 75.61 42.9 7 100.0 7 ARMSSC4 RELIABLE SIDE CHAINS . 75.61 42.9 7 100.0 7 ARMSSC4 SECONDARY STRUCTURE . . 71.90 50.0 6 100.0 6 ARMSSC4 SURFACE . . . . . . . . 75.61 42.9 7 100.0 7 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 2.32 (Number of atoms: 39) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 2.32 39 100.0 39 CRMSCA CRN = ALL/NP . . . . . 0.0594 CRMSCA SECONDARY STRUCTURE . . 2.23 32 100.0 32 CRMSCA SURFACE . . . . . . . . 2.23 37 100.0 37 CRMSCA BURIED . . . . . . . . 3.59 2 100.0 2 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 2.36 194 100.0 194 CRMSMC SECONDARY STRUCTURE . . 2.27 160 100.0 160 CRMSMC SURFACE . . . . . . . . 2.28 184 100.0 184 CRMSMC BURIED . . . . . . . . 3.58 10 100.0 10 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 4.10 157 100.0 157 CRMSSC RELIABLE SIDE CHAINS . 4.01 139 100.0 139 CRMSSC SECONDARY STRUCTURE . . 4.09 130 100.0 130 CRMSSC SURFACE . . . . . . . . 4.09 155 100.0 155 CRMSSC BURIED . . . . . . . . 4.50 2 100.0 2 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 3.31 313 100.0 313 CRMSALL SECONDARY STRUCTURE . . 3.28 258 100.0 258 CRMSALL SURFACE . . . . . . . . 3.30 303 100.0 303 CRMSALL BURIED . . . . . . . . 3.58 10 100.0 10 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.031 1.000 0.500 39 100.0 39 ERRCA SECONDARY STRUCTURE . . 1.964 1.000 0.500 32 100.0 32 ERRCA SURFACE . . . . . . . . 1.959 1.000 0.500 37 100.0 37 ERRCA BURIED . . . . . . . . 3.355 1.000 0.500 2 100.0 2 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.043 1.000 0.500 194 100.0 194 ERRMC SECONDARY STRUCTURE . . 1.984 1.000 0.500 160 100.0 160 ERRMC SURFACE . . . . . . . . 1.972 1.000 0.500 184 100.0 184 ERRMC BURIED . . . . . . . . 3.341 1.000 0.500 10 100.0 10 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.381 1.000 0.500 157 100.0 157 ERRSC RELIABLE SIDE CHAINS . 3.272 1.000 0.500 139 100.0 139 ERRSC SECONDARY STRUCTURE . . 3.357 1.000 0.500 130 100.0 130 ERRSC SURFACE . . . . . . . . 3.372 1.000 0.500 155 100.0 155 ERRSC BURIED . . . . . . . . 4.082 1.000 0.500 2 100.0 2 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.677 1.000 0.500 313 100.0 313 ERRALL SECONDARY STRUCTURE . . 2.638 1.000 0.500 258 100.0 258 ERRALL SURFACE . . . . . . . . 2.655 1.000 0.500 303 100.0 303 ERRALL BURIED . . . . . . . . 3.341 1.000 0.500 10 100.0 10 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 7 22 31 39 39 39 39 DISTCA CA (P) 17.95 56.41 79.49 100.00 100.00 39 DISTCA CA (RMS) 0.72 1.34 1.67 2.32 2.32 DISTCA ALL (N) 40 137 214 282 309 313 313 DISTALL ALL (P) 12.78 43.77 68.37 90.10 98.72 313 DISTALL ALL (RMS) 0.67 1.36 1.79 2.46 3.06 DISTALL END of the results output