####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 39 ( 313), selected 39 , name T0586TS104_1-D2 # Molecule2: number of CA atoms 39 ( 313), selected 39 , name T0586-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0586TS104_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 39 85 - 123 2.05 2.05 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 38 85 - 122 1.87 2.07 LONGEST_CONTINUOUS_SEGMENT: 38 86 - 123 1.98 2.07 LCS_AVERAGE: 97.44 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 32 85 - 116 0.98 2.43 LCS_AVERAGE: 78.96 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 39 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT D 85 D 85 32 38 39 8 23 28 31 33 34 35 35 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT Q 86 Q 86 32 38 39 10 24 30 31 33 34 35 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 87 L 87 32 38 39 20 25 30 31 33 34 35 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 88 K 88 32 38 39 20 25 30 31 33 34 35 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 89 K 89 32 38 39 20 25 30 31 33 34 35 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 90 E 90 32 38 39 20 25 30 31 33 34 35 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 91 L 91 32 38 39 20 25 30 31 33 34 35 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 92 A 92 32 38 39 20 25 30 31 33 34 35 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT D 93 D 93 32 38 39 20 25 30 31 33 34 35 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 94 A 94 32 38 39 20 25 30 31 33 34 35 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 95 I 95 32 38 39 20 25 30 31 33 34 35 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT T 96 T 96 32 38 39 20 25 30 31 33 34 35 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 97 E 97 32 38 39 20 25 30 31 33 34 35 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT R 98 R 98 32 38 39 20 25 30 31 33 34 35 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT F 99 F 99 32 38 39 20 25 30 31 33 34 35 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 100 L 100 32 38 39 20 25 30 31 33 34 35 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 101 E 101 32 38 39 20 25 30 31 33 34 35 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 102 E 102 32 38 39 20 25 30 31 33 34 35 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 103 A 103 32 38 39 20 25 30 31 33 34 35 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 104 K 104 32 38 39 20 25 30 31 33 34 35 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT S 105 S 105 32 38 39 20 25 30 31 33 34 35 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 106 I 106 32 38 39 10 25 30 31 33 34 35 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT G 107 G 107 32 38 39 12 25 30 31 33 34 35 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 108 L 108 32 38 39 20 25 30 31 33 34 35 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT D 109 D 109 32 38 39 12 25 30 31 33 34 35 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT D 110 D 110 32 38 39 10 19 30 31 33 34 35 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT Q 111 Q 111 32 38 39 10 25 30 31 33 34 35 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT T 112 T 112 32 38 39 12 25 30 31 33 34 35 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 113 A 113 32 38 39 12 23 30 31 33 34 35 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 114 I 114 32 38 39 12 19 30 31 33 34 35 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 115 E 115 32 38 39 12 24 30 31 33 34 35 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 116 L 116 32 38 39 12 19 22 30 33 34 35 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 117 L 117 27 38 39 12 19 22 28 32 34 35 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 118 I 118 25 38 39 12 19 26 30 33 34 35 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 119 K 119 25 38 39 12 19 22 27 31 33 35 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT R 120 R 120 25 38 39 12 19 22 26 27 32 35 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT S 121 S 121 25 38 39 12 19 22 26 28 32 35 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT R 122 R 122 25 38 39 10 19 22 26 28 32 35 37 38 39 39 39 39 39 39 39 39 39 39 39 LCS_GDT N 123 N 123 25 38 39 4 19 22 26 26 30 33 36 37 39 39 39 39 39 39 39 39 39 39 39 LCS_AVERAGE LCS_A: 92.13 ( 78.96 97.44 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 20 25 30 31 33 34 35 37 38 39 39 39 39 39 39 39 39 39 39 39 GDT PERCENT_AT 51.28 64.10 76.92 79.49 84.62 87.18 89.74 94.87 97.44 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.29 0.51 0.79 0.85 1.08 1.20 1.34 1.80 1.87 2.05 2.05 2.05 2.05 2.05 2.05 2.05 2.05 2.05 2.05 2.05 GDT RMS_ALL_AT 3.07 2.65 2.44 2.50 2.34 2.28 2.22 2.06 2.07 2.05 2.05 2.05 2.05 2.05 2.05 2.05 2.05 2.05 2.05 2.05 # Checking swapping # possible swapping detected: D 85 D 85 # possible swapping detected: E 97 E 97 # possible swapping detected: E 102 E 102 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA D 85 D 85 3.752 0 0.041 0.774 4.802 48.333 47.738 LGA Q 86 Q 86 3.134 0 0.060 1.098 3.711 53.571 50.106 LGA L 87 L 87 1.624 0 0.040 1.404 3.009 75.119 71.310 LGA K 88 K 88 1.835 0 0.026 1.023 4.168 72.857 64.444 LGA K 89 K 89 2.322 0 0.033 1.322 3.989 66.786 60.847 LGA E 90 E 90 1.742 0 0.052 1.169 4.702 77.143 64.339 LGA L 91 L 91 0.751 0 0.032 0.684 3.204 88.214 77.857 LGA A 92 A 92 1.073 0 0.041 0.050 1.308 83.690 83.238 LGA D 93 D 93 1.216 0 0.048 0.294 1.809 81.429 78.214 LGA A 94 A 94 0.814 0 0.026 0.035 0.897 90.476 90.476 LGA I 95 I 95 0.604 0 0.053 0.584 2.716 90.476 86.310 LGA T 96 T 96 1.010 0 0.055 0.947 3.143 83.690 75.850 LGA E 97 E 97 1.280 0 0.065 0.958 4.193 85.952 72.963 LGA R 98 R 98 0.601 0 0.043 1.180 5.460 92.857 69.827 LGA F 99 F 99 0.706 0 0.031 0.351 2.497 90.476 80.173 LGA L 100 L 100 0.726 0 0.050 0.890 3.751 90.476 82.381 LGA E 101 E 101 0.692 0 0.047 1.144 4.442 90.476 77.143 LGA E 102 E 102 0.905 0 0.029 0.970 3.250 88.214 76.296 LGA A 103 A 103 0.598 0 0.046 0.064 0.788 95.238 94.286 LGA K 104 K 104 0.802 0 0.040 1.149 7.081 90.476 66.772 LGA S 105 S 105 1.195 0 0.111 0.683 3.549 83.690 76.587 LGA I 106 I 106 0.688 0 0.276 1.524 3.194 86.071 76.786 LGA G 107 G 107 0.678 0 0.129 0.129 0.702 92.857 92.857 LGA L 108 L 108 0.872 0 0.129 1.426 3.553 85.952 72.262 LGA D 109 D 109 1.530 0 0.035 0.943 2.562 81.548 74.226 LGA D 110 D 110 1.521 0 0.046 0.415 4.522 77.143 65.952 LGA Q 111 Q 111 1.417 0 0.037 0.810 2.044 81.548 75.873 LGA T 112 T 112 1.014 0 0.039 0.250 1.676 85.952 82.789 LGA A 113 A 113 0.642 0 0.039 0.050 1.091 90.595 90.571 LGA I 114 I 114 1.131 0 0.036 0.667 2.444 88.214 79.583 LGA E 115 E 115 0.738 0 0.034 0.528 3.613 85.952 69.524 LGA L 116 L 116 1.867 0 0.038 0.281 2.581 70.952 66.905 LGA L 117 L 117 2.225 0 0.037 0.902 3.458 64.881 61.071 LGA I 118 I 118 1.448 0 0.044 0.702 2.421 75.119 81.667 LGA K 119 K 119 2.862 0 0.030 1.352 4.915 50.595 48.995 LGA R 120 R 120 4.221 0 0.027 1.254 9.131 37.262 28.009 LGA S 121 S 121 4.208 0 0.052 0.687 4.627 37.262 39.286 LGA R 122 R 122 4.267 0 0.244 1.985 10.077 28.452 26.883 LGA N 123 N 123 5.582 0 0.306 1.606 9.781 14.524 22.976 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 39 156 156 100.00 313 313 100.00 39 SUMMARY(RMSD_GDC): 2.054 2.221 2.731 75.757 69.317 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 39 39 4.0 37 1.80 84.615 90.587 1.944 LGA_LOCAL RMSD: 1.803 Number of atoms: 37 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.060 Number of assigned atoms: 39 Std_ASGN_ATOMS RMSD: 2.054 Standard rmsd on all 39 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.277358 * X + 0.504143 * Y + 0.817870 * Z + -58.321686 Y_new = -0.629915 * X + -0.738192 * Y + 0.241411 * Z + 58.023418 Z_new = 0.725451 * X + -0.448232 * Y + 0.522311 * Z + -41.940090 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.985563 -0.811690 -0.709218 [DEG: -113.7644 -46.5064 -40.6352 ] ZXZ: 1.857816 1.021237 2.124249 [DEG: 106.4450 58.5126 121.7105 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0586TS104_1-D2 REMARK 2: T0586-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0586TS104_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 39 39 4.0 37 1.80 90.587 2.05 REMARK ---------------------------------------------------------- MOLECULE T0586TS104_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0586 REMARK MODEL 1 REMARK PARENT N/A ATOM 668 N ASP 85 4.943 18.827 15.015 1.00 0.00 N ATOM 669 CA ASP 85 4.711 17.897 16.076 1.00 0.00 C ATOM 670 C ASP 85 3.246 17.695 16.295 1.00 0.00 C ATOM 671 O ASP 85 2.820 16.593 16.636 1.00 0.00 O ATOM 672 CB ASP 85 5.479 18.189 17.389 1.00 0.00 C ATOM 673 CG ASP 85 5.735 19.674 17.581 1.00 0.00 C ATOM 674 OD1 ASP 85 6.689 20.177 16.934 1.00 0.00 O ATOM 675 OD2 ASP 85 5.012 20.315 18.388 1.00 0.00 O ATOM 676 N GLN 86 2.429 18.740 16.088 1.00 0.00 N ATOM 677 CA GLN 86 1.014 18.592 16.273 1.00 0.00 C ATOM 678 C GLN 86 0.508 17.584 15.291 1.00 0.00 C ATOM 679 O GLN 86 -0.315 16.733 15.630 1.00 0.00 O ATOM 680 CB GLN 86 0.259 19.906 16.023 1.00 0.00 C ATOM 681 CG GLN 86 -1.176 19.903 16.545 1.00 0.00 C ATOM 682 CD GLN 86 -2.104 19.813 15.344 1.00 0.00 C ATOM 683 OE1 GLN 86 -2.271 20.771 14.593 1.00 0.00 O ATOM 684 NE2 GLN 86 -2.739 18.623 15.161 1.00 0.00 N ATOM 685 N LEU 87 1.009 17.645 14.043 1.00 0.00 N ATOM 686 CA LEU 87 0.564 16.747 13.019 1.00 0.00 C ATOM 687 C LEU 87 0.943 15.360 13.409 1.00 0.00 C ATOM 688 O LEU 87 0.174 14.426 13.205 1.00 0.00 O ATOM 689 CB LEU 87 1.210 17.019 11.646 1.00 0.00 C ATOM 690 CG LEU 87 0.709 18.305 10.963 1.00 0.00 C ATOM 691 CD1 LEU 87 1.460 18.564 9.646 1.00 0.00 C ATOM 692 CD2 LEU 87 -0.817 18.284 10.782 1.00 0.00 C ATOM 693 N LYS 88 2.137 15.192 14.002 1.00 0.00 N ATOM 694 CA LYS 88 2.635 13.894 14.359 1.00 0.00 C ATOM 695 C LYS 88 1.705 13.278 15.351 1.00 0.00 C ATOM 696 O LYS 88 1.384 12.094 15.266 1.00 0.00 O ATOM 697 CB LYS 88 4.033 13.998 15.000 1.00 0.00 C ATOM 698 CG LYS 88 4.598 12.701 15.584 1.00 0.00 C ATOM 699 CD LYS 88 4.886 12.749 17.085 1.00 0.00 C ATOM 700 CE LYS 88 4.659 11.410 17.789 1.00 0.00 C ATOM 701 NZ LYS 88 3.493 11.500 18.694 1.00 0.00 N ATOM 702 N LYS 89 1.225 14.083 16.312 1.00 0.00 N ATOM 703 CA LYS 89 0.354 13.581 17.331 1.00 0.00 C ATOM 704 C LYS 89 -0.887 13.047 16.676 1.00 0.00 C ATOM 705 O LYS 89 -1.381 11.978 17.032 1.00 0.00 O ATOM 706 CB LYS 89 -0.062 14.687 18.314 1.00 0.00 C ATOM 707 CG LYS 89 -0.878 14.193 19.507 1.00 0.00 C ATOM 708 CD LYS 89 -2.014 15.142 19.893 1.00 0.00 C ATOM 709 CE LYS 89 -3.400 14.631 19.500 1.00 0.00 C ATOM 710 NZ LYS 89 -3.585 13.240 19.972 1.00 0.00 N ATOM 711 N GLU 90 -1.409 13.783 15.682 1.00 0.00 N ATOM 712 CA GLU 90 -2.624 13.416 15.014 1.00 0.00 C ATOM 713 C GLU 90 -2.402 12.160 14.232 1.00 0.00 C ATOM 714 O GLU 90 -3.239 11.259 14.243 1.00 0.00 O ATOM 715 CB GLU 90 -3.082 14.515 14.043 1.00 0.00 C ATOM 716 CG GLU 90 -4.430 14.239 13.380 1.00 0.00 C ATOM 717 CD GLU 90 -4.151 13.876 11.929 1.00 0.00 C ATOM 718 OE1 GLU 90 -2.982 14.039 11.489 1.00 0.00 O ATOM 719 OE2 GLU 90 -5.108 13.434 11.238 1.00 0.00 O ATOM 720 N LEU 91 -1.253 12.059 13.539 1.00 0.00 N ATOM 721 CA LEU 91 -0.995 10.876 12.772 1.00 0.00 C ATOM 722 C LEU 91 -0.830 9.732 13.707 1.00 0.00 C ATOM 723 O LEU 91 -1.195 8.607 13.379 1.00 0.00 O ATOM 724 CB LEU 91 0.279 10.919 11.907 1.00 0.00 C ATOM 725 CG LEU 91 0.082 10.563 10.422 1.00 0.00 C ATOM 726 CD1 LEU 91 1.219 11.080 9.534 1.00 0.00 C ATOM 727 CD2 LEU 91 -0.167 9.056 10.255 1.00 0.00 C ATOM 728 N ALA 92 -0.276 9.996 14.904 1.00 0.00 N ATOM 729 CA ALA 92 -0.052 8.939 15.841 1.00 0.00 C ATOM 730 C ALA 92 -1.361 8.281 16.110 1.00 0.00 C ATOM 731 O ALA 92 -1.439 7.057 16.190 1.00 0.00 O ATOM 732 CB ALA 92 0.502 9.435 17.187 1.00 0.00 C ATOM 733 N ASP 93 -2.437 9.078 16.238 1.00 0.00 N ATOM 734 CA ASP 93 -3.712 8.510 16.553 1.00 0.00 C ATOM 735 C ASP 93 -4.123 7.575 15.459 1.00 0.00 C ATOM 736 O ASP 93 -4.606 6.476 15.726 1.00 0.00 O ATOM 737 CB ASP 93 -4.810 9.577 16.716 1.00 0.00 C ATOM 738 CG ASP 93 -4.231 10.708 17.562 1.00 0.00 C ATOM 739 OD1 ASP 93 -3.445 10.402 18.497 1.00 0.00 O ATOM 740 OD2 ASP 93 -4.571 11.889 17.287 1.00 0.00 O ATOM 741 N ALA 94 -3.920 7.977 14.193 1.00 0.00 N ATOM 742 CA ALA 94 -4.361 7.166 13.094 1.00 0.00 C ATOM 743 C ALA 94 -3.630 5.859 13.080 1.00 0.00 C ATOM 744 O ALA 94 -4.217 4.808 12.833 1.00 0.00 O ATOM 745 CB ALA 94 -4.119 7.836 11.730 1.00 0.00 C ATOM 746 N ILE 95 -2.319 5.896 13.366 1.00 0.00 N ATOM 747 CA ILE 95 -1.512 4.712 13.301 1.00 0.00 C ATOM 748 C ILE 95 -2.017 3.763 14.333 1.00 0.00 C ATOM 749 O ILE 95 -2.220 2.579 14.064 1.00 0.00 O ATOM 750 CB ILE 95 -0.076 4.986 13.647 1.00 0.00 C ATOM 751 CG1 ILE 95 0.591 5.911 12.613 1.00 0.00 C ATOM 752 CG2 ILE 95 0.801 3.799 14.069 1.00 0.00 C ATOM 753 CD1 ILE 95 1.015 5.214 11.321 1.00 0.00 C ATOM 754 N THR 96 -2.244 4.286 15.548 1.00 0.00 N ATOM 755 CA THR 96 -2.644 3.482 16.657 1.00 0.00 C ATOM 756 C THR 96 -3.992 2.897 16.409 1.00 0.00 C ATOM 757 O THR 96 -4.207 1.710 16.642 1.00 0.00 O ATOM 758 CB THR 96 -2.717 4.254 17.940 1.00 0.00 C ATOM 759 OG1 THR 96 -1.642 5.178 18.014 1.00 0.00 O ATOM 760 CG2 THR 96 -2.639 3.267 19.117 1.00 0.00 C ATOM 761 N GLU 97 -4.945 3.707 15.917 1.00 0.00 N ATOM 762 CA GLU 97 -6.266 3.184 15.741 1.00 0.00 C ATOM 763 C GLU 97 -6.233 2.157 14.654 1.00 0.00 C ATOM 764 O GLU 97 -6.940 1.152 14.714 1.00 0.00 O ATOM 765 CB GLU 97 -7.305 4.263 15.374 1.00 0.00 C ATOM 766 CG GLU 97 -7.114 4.908 13.997 1.00 0.00 C ATOM 767 CD GLU 97 -7.770 6.281 14.027 1.00 0.00 C ATOM 768 OE1 GLU 97 -7.661 6.960 15.082 1.00 0.00 O ATOM 769 OE2 GLU 97 -8.383 6.673 12.999 1.00 0.00 O ATOM 770 N ARG 98 -5.382 2.370 13.637 1.00 0.00 N ATOM 771 CA ARG 98 -5.333 1.460 12.532 1.00 0.00 C ATOM 772 C ARG 98 -4.900 0.098 12.991 1.00 0.00 C ATOM 773 O ARG 98 -5.440 -0.914 12.544 1.00 0.00 O ATOM 774 CB ARG 98 -4.360 1.922 11.436 1.00 0.00 C ATOM 775 CG ARG 98 -4.816 1.551 10.028 1.00 0.00 C ATOM 776 CD ARG 98 -4.784 2.726 9.049 1.00 0.00 C ATOM 777 NE ARG 98 -5.150 3.942 9.826 1.00 0.00 N ATOM 778 CZ ARG 98 -6.176 4.740 9.412 1.00 0.00 C ATOM 779 NH1 ARG 98 -6.089 5.400 8.220 1.00 0.00 H ATOM 780 NH2 ARG 98 -7.290 4.872 10.186 1.00 0.00 H ATOM 781 N PHE 99 -3.923 0.040 13.915 1.00 0.00 N ATOM 782 CA PHE 99 -3.376 -1.212 14.358 1.00 0.00 C ATOM 783 C PHE 99 -4.450 -2.025 15.007 1.00 0.00 C ATOM 784 O PHE 99 -4.568 -3.221 14.749 1.00 0.00 O ATOM 785 CB PHE 99 -2.244 -1.014 15.382 1.00 0.00 C ATOM 786 CG PHE 99 -2.034 -2.285 16.135 1.00 0.00 C ATOM 787 CD1 PHE 99 -1.547 -3.399 15.490 1.00 0.00 C ATOM 788 CD2 PHE 99 -2.306 -2.365 17.482 1.00 0.00 C ATOM 789 CE1 PHE 99 -1.343 -4.575 16.174 1.00 0.00 C ATOM 790 CE2 PHE 99 -2.104 -3.538 18.171 1.00 0.00 C ATOM 791 CZ PHE 99 -1.621 -4.647 17.518 1.00 0.00 C ATOM 792 N LEU 100 -5.276 -1.390 15.860 1.00 0.00 N ATOM 793 CA LEU 100 -6.290 -2.105 16.585 1.00 0.00 C ATOM 794 C LEU 100 -7.276 -2.658 15.618 1.00 0.00 C ATOM 795 O LEU 100 -7.752 -3.780 15.785 1.00 0.00 O ATOM 796 CB LEU 100 -7.082 -1.222 17.565 1.00 0.00 C ATOM 797 CG LEU 100 -6.812 -1.518 19.051 1.00 0.00 C ATOM 798 CD1 LEU 100 -7.350 -2.901 19.450 1.00 0.00 C ATOM 799 CD2 LEU 100 -5.326 -1.341 19.396 1.00 0.00 C ATOM 800 N GLU 101 -7.607 -1.882 14.571 1.00 0.00 N ATOM 801 CA GLU 101 -8.596 -2.323 13.637 1.00 0.00 C ATOM 802 C GLU 101 -8.088 -3.539 12.938 1.00 0.00 C ATOM 803 O GLU 101 -8.809 -4.527 12.804 1.00 0.00 O ATOM 804 CB GLU 101 -8.907 -1.298 12.535 1.00 0.00 C ATOM 805 CG GLU 101 -9.718 -0.092 13.001 1.00 0.00 C ATOM 806 CD GLU 101 -9.612 0.959 11.909 1.00 0.00 C ATOM 807 OE1 GLU 101 -8.691 1.812 11.990 1.00 0.00 O ATOM 808 OE2 GLU 101 -10.448 0.911 10.967 1.00 0.00 O ATOM 809 N GLU 102 -6.823 -3.510 12.483 1.00 0.00 N ATOM 810 CA GLU 102 -6.315 -4.637 11.755 1.00 0.00 C ATOM 811 C GLU 102 -6.194 -5.808 12.671 1.00 0.00 C ATOM 812 O GLU 102 -6.485 -6.937 12.283 1.00 0.00 O ATOM 813 CB GLU 102 -4.911 -4.429 11.163 1.00 0.00 C ATOM 814 CG GLU 102 -4.778 -3.236 10.220 1.00 0.00 C ATOM 815 CD GLU 102 -3.485 -2.521 10.590 1.00 0.00 C ATOM 816 OE1 GLU 102 -2.767 -3.026 11.493 1.00 0.00 O ATOM 817 OE2 GLU 102 -3.196 -1.462 9.971 1.00 0.00 O ATOM 818 N ALA 103 -5.775 -5.566 13.925 1.00 0.00 N ATOM 819 CA ALA 103 -5.539 -6.645 14.838 1.00 0.00 C ATOM 820 C ALA 103 -6.820 -7.369 15.105 1.00 0.00 C ATOM 821 O ALA 103 -6.842 -8.597 15.185 1.00 0.00 O ATOM 822 CB ALA 103 -4.998 -6.161 16.195 1.00 0.00 C ATOM 823 N LYS 104 -7.929 -6.624 15.234 1.00 0.00 N ATOM 824 CA LYS 104 -9.191 -7.234 15.532 1.00 0.00 C ATOM 825 C LYS 104 -9.587 -8.079 14.361 1.00 0.00 C ATOM 826 O LYS 104 -10.097 -9.185 14.530 1.00 0.00 O ATOM 827 CB LYS 104 -10.294 -6.184 15.747 1.00 0.00 C ATOM 828 CG LYS 104 -11.461 -6.666 16.609 1.00 0.00 C ATOM 829 CD LYS 104 -11.206 -6.502 18.108 1.00 0.00 C ATOM 830 CE LYS 104 -11.468 -7.771 18.922 1.00 0.00 C ATOM 831 NZ LYS 104 -10.254 -8.618 18.964 1.00 0.00 N ATOM 832 N SER 105 -9.333 -7.577 13.137 1.00 0.00 N ATOM 833 CA SER 105 -9.700 -8.270 11.936 1.00 0.00 C ATOM 834 C SER 105 -8.883 -9.518 11.842 1.00 0.00 C ATOM 835 O SER 105 -9.370 -10.560 11.408 1.00 0.00 O ATOM 836 CB SER 105 -9.427 -7.443 10.668 1.00 0.00 C ATOM 837 OG SER 105 -9.920 -6.121 10.834 1.00 0.00 O ATOM 838 N ILE 106 -7.612 -9.435 12.267 1.00 0.00 N ATOM 839 CA ILE 106 -6.712 -10.548 12.226 1.00 0.00 C ATOM 840 C ILE 106 -7.193 -11.553 13.224 1.00 0.00 C ATOM 841 O ILE 106 -7.169 -12.754 12.964 1.00 0.00 O ATOM 842 CB ILE 106 -5.295 -10.178 12.555 1.00 0.00 C ATOM 843 CG1 ILE 106 -4.611 -9.563 11.321 1.00 0.00 C ATOM 844 CG2 ILE 106 -4.340 -11.021 13.414 1.00 0.00 C ATOM 845 CD1 ILE 106 -3.625 -8.444 11.658 1.00 0.00 C ATOM 846 N GLY 107 -7.668 -11.085 14.395 1.00 0.00 N ATOM 847 CA GLY 107 -8.107 -12.015 15.392 1.00 0.00 C ATOM 848 C GLY 107 -7.306 -11.817 16.641 1.00 0.00 C ATOM 849 O GLY 107 -7.561 -12.478 17.638 1.00 0.00 O ATOM 850 N LEU 108 -6.295 -10.926 16.609 1.00 0.00 N ATOM 851 CA LEU 108 -5.576 -10.690 17.825 1.00 0.00 C ATOM 852 C LEU 108 -6.498 -9.953 18.743 1.00 0.00 C ATOM 853 O LEU 108 -7.205 -9.036 18.329 1.00 0.00 O ATOM 854 CB LEU 108 -4.309 -9.834 17.670 1.00 0.00 C ATOM 855 CG LEU 108 -3.408 -10.237 16.489 1.00 0.00 C ATOM 856 CD1 LEU 108 -2.540 -9.055 16.029 1.00 0.00 C ATOM 857 CD2 LEU 108 -2.557 -11.470 16.831 1.00 0.00 C ATOM 858 N ASP 109 -6.504 -10.351 20.028 1.00 0.00 N ATOM 859 CA ASP 109 -7.372 -9.761 21.003 1.00 0.00 C ATOM 860 C ASP 109 -6.844 -8.414 21.377 1.00 0.00 C ATOM 861 O ASP 109 -5.685 -8.088 21.127 1.00 0.00 O ATOM 862 CB ASP 109 -7.481 -10.589 22.295 1.00 0.00 C ATOM 863 CG ASP 109 -8.917 -10.519 22.790 1.00 0.00 C ATOM 864 OD1 ASP 109 -9.729 -11.377 22.358 1.00 0.00 O ATOM 865 OD2 ASP 109 -9.219 -9.614 23.616 1.00 0.00 O ATOM 866 N ASP 110 -7.711 -7.601 22.011 1.00 0.00 N ATOM 867 CA ASP 110 -7.366 -6.271 22.417 1.00 0.00 C ATOM 868 C ASP 110 -6.267 -6.358 23.425 1.00 0.00 C ATOM 869 O ASP 110 -5.312 -5.583 23.381 1.00 0.00 O ATOM 870 CB ASP 110 -8.531 -5.530 23.101 1.00 0.00 C ATOM 871 CG ASP 110 -9.818 -5.823 22.346 1.00 0.00 C ATOM 872 OD1 ASP 110 -9.851 -5.586 21.109 1.00 0.00 O ATOM 873 OD2 ASP 110 -10.789 -6.285 23.002 1.00 0.00 O ATOM 874 N GLN 111 -6.369 -7.320 24.362 1.00 0.00 N ATOM 875 CA GLN 111 -5.387 -7.441 25.400 1.00 0.00 C ATOM 876 C GLN 111 -4.059 -7.752 24.789 1.00 0.00 C ATOM 877 O GLN 111 -3.039 -7.213 25.215 1.00 0.00 O ATOM 878 CB GLN 111 -5.705 -8.543 26.425 1.00 0.00 C ATOM 879 CG GLN 111 -6.693 -8.108 27.513 1.00 0.00 C ATOM 880 CD GLN 111 -8.111 -8.135 26.969 1.00 0.00 C ATOM 881 OE1 GLN 111 -8.969 -7.361 27.395 1.00 0.00 O ATOM 882 NE2 GLN 111 -8.378 -9.064 26.014 1.00 0.00 N ATOM 883 N THR 112 -4.037 -8.627 23.768 1.00 0.00 N ATOM 884 CA THR 112 -2.805 -9.002 23.132 1.00 0.00 C ATOM 885 C THR 112 -2.233 -7.791 22.478 1.00 0.00 C ATOM 886 O THR 112 -1.032 -7.530 22.563 1.00 0.00 O ATOM 887 CB THR 112 -3.017 -10.038 22.065 1.00 0.00 C ATOM 888 OG1 THR 112 -4.073 -10.907 22.443 1.00 0.00 O ATOM 889 CG2 THR 112 -1.719 -10.843 21.866 1.00 0.00 C ATOM 890 N ALA 113 -3.102 -7.003 21.823 1.00 0.00 N ATOM 891 CA ALA 113 -2.659 -5.837 21.125 1.00 0.00 C ATOM 892 C ALA 113 -2.042 -4.915 22.123 1.00 0.00 C ATOM 893 O ALA 113 -1.014 -4.301 21.856 1.00 0.00 O ATOM 894 CB ALA 113 -3.810 -5.078 20.442 1.00 0.00 C ATOM 895 N ILE 114 -2.644 -4.820 23.319 1.00 0.00 N ATOM 896 CA ILE 114 -2.159 -3.906 24.309 1.00 0.00 C ATOM 897 C ILE 114 -0.757 -4.276 24.672 1.00 0.00 C ATOM 898 O ILE 114 0.106 -3.405 24.769 1.00 0.00 O ATOM 899 CB ILE 114 -2.967 -3.945 25.573 1.00 0.00 C ATOM 900 CG1 ILE 114 -4.319 -3.244 25.365 1.00 0.00 C ATOM 901 CG2 ILE 114 -2.392 -3.762 26.985 1.00 0.00 C ATOM 902 CD1 ILE 114 -4.253 -1.729 25.548 1.00 0.00 C ATOM 903 N GLU 115 -0.482 -5.578 24.879 1.00 0.00 N ATOM 904 CA GLU 115 0.837 -5.964 25.292 1.00 0.00 C ATOM 905 C GLU 115 1.820 -5.661 24.207 1.00 0.00 C ATOM 906 O GLU 115 2.920 -5.180 24.474 1.00 0.00 O ATOM 907 CB GLU 115 0.967 -7.456 25.657 1.00 0.00 C ATOM 908 CG GLU 115 0.845 -8.430 24.482 1.00 0.00 C ATOM 909 CD GLU 115 0.455 -9.788 25.054 1.00 0.00 C ATOM 910 OE1 GLU 115 -0.661 -9.887 25.628 1.00 0.00 O ATOM 911 OE2 GLU 115 1.264 -10.746 24.923 1.00 0.00 O ATOM 912 N LEU 116 1.444 -5.912 22.937 1.00 0.00 N ATOM 913 CA LEU 116 2.364 -5.695 21.859 1.00 0.00 C ATOM 914 C LEU 116 2.716 -4.243 21.832 1.00 0.00 C ATOM 915 O LEU 116 3.883 -3.884 21.687 1.00 0.00 O ATOM 916 CB LEU 116 1.764 -6.037 20.485 1.00 0.00 C ATOM 917 CG LEU 116 1.576 -7.544 20.240 1.00 0.00 C ATOM 918 CD1 LEU 116 0.333 -7.808 19.373 1.00 0.00 C ATOM 919 CD2 LEU 116 2.846 -8.181 19.651 1.00 0.00 C ATOM 920 N LEU 117 1.704 -3.371 21.996 1.00 0.00 N ATOM 921 CA LEU 117 1.925 -1.954 21.953 1.00 0.00 C ATOM 922 C LEU 117 2.831 -1.531 23.059 1.00 0.00 C ATOM 923 O LEU 117 3.684 -0.668 22.861 1.00 0.00 O ATOM 924 CB LEU 117 0.639 -1.109 22.057 1.00 0.00 C ATOM 925 CG LEU 117 0.054 -0.639 20.708 1.00 0.00 C ATOM 926 CD1 LEU 117 0.862 0.540 20.141 1.00 0.00 C ATOM 927 CD2 LEU 117 -0.084 -1.790 19.703 1.00 0.00 C ATOM 928 N ILE 118 2.687 -2.131 24.252 1.00 0.00 N ATOM 929 CA ILE 118 3.495 -1.720 25.360 1.00 0.00 C ATOM 930 C ILE 118 4.924 -1.940 24.988 1.00 0.00 C ATOM 931 O ILE 118 5.769 -1.073 25.202 1.00 0.00 O ATOM 932 CB ILE 118 3.230 -2.537 26.594 1.00 0.00 C ATOM 933 CG1 ILE 118 1.933 -2.090 27.293 1.00 0.00 C ATOM 934 CG2 ILE 118 4.321 -3.020 27.562 1.00 0.00 C ATOM 935 CD1 ILE 118 2.129 -0.957 28.300 1.00 0.00 C ATOM 936 N LYS 119 5.226 -3.108 24.395 1.00 0.00 N ATOM 937 CA LYS 119 6.585 -3.410 24.060 1.00 0.00 C ATOM 938 C LYS 119 7.086 -2.407 23.071 1.00 0.00 C ATOM 939 O LYS 119 8.186 -1.878 23.214 1.00 0.00 O ATOM 940 CB LYS 119 6.751 -4.788 23.399 1.00 0.00 C ATOM 941 CG LYS 119 6.371 -5.968 24.294 1.00 0.00 C ATOM 942 CD LYS 119 6.147 -7.262 23.511 1.00 0.00 C ATOM 943 CE LYS 119 5.817 -8.466 24.394 1.00 0.00 C ATOM 944 NZ LYS 119 4.372 -8.765 24.320 1.00 0.00 N ATOM 945 N ARG 120 6.273 -2.102 22.046 1.00 0.00 N ATOM 946 CA ARG 120 6.697 -1.225 20.992 1.00 0.00 C ATOM 947 C ARG 120 6.975 0.140 21.534 1.00 0.00 C ATOM 948 O ARG 120 7.968 0.768 21.174 1.00 0.00 O ATOM 949 CB ARG 120 5.614 -1.032 19.917 1.00 0.00 C ATOM 950 CG ARG 120 5.288 -2.290 19.109 1.00 0.00 C ATOM 951 CD ARG 120 3.822 -2.359 18.682 1.00 0.00 C ATOM 952 NE ARG 120 3.474 -3.794 18.486 1.00 0.00 N ATOM 953 CZ ARG 120 2.690 -4.176 17.437 1.00 0.00 C ATOM 954 NH1 ARG 120 1.631 -3.404 17.058 1.00 0.00 H ATOM 955 NH2 ARG 120 2.964 -5.335 16.769 1.00 0.00 H ATOM 956 N SER 121 6.096 0.647 22.415 1.00 0.00 N ATOM 957 CA SER 121 6.282 1.988 22.883 1.00 0.00 C ATOM 958 C SER 121 7.545 2.083 23.673 1.00 0.00 C ATOM 959 O SER 121 8.289 3.052 23.533 1.00 0.00 O ATOM 960 CB SER 121 5.121 2.502 23.753 1.00 0.00 C ATOM 961 OG SER 121 4.726 1.517 24.695 1.00 0.00 O ATOM 962 N ARG 122 7.833 1.078 24.521 1.00 0.00 N ATOM 963 CA ARG 122 9.009 1.184 25.330 1.00 0.00 C ATOM 964 C ARG 122 10.228 1.224 24.462 1.00 0.00 C ATOM 965 O ARG 122 11.077 2.098 24.628 1.00 0.00 O ATOM 966 CB ARG 122 9.174 0.024 26.331 1.00 0.00 C ATOM 967 CG ARG 122 9.369 -1.347 25.685 1.00 0.00 C ATOM 968 CD ARG 122 10.334 -2.255 26.449 1.00 0.00 C ATOM 969 NE ARG 122 11.614 -2.284 25.686 1.00 0.00 N ATOM 970 CZ ARG 122 12.609 -1.398 25.972 1.00 0.00 C ATOM 971 NH1 ARG 122 12.817 -0.996 27.260 1.00 0.00 H ATOM 972 NH2 ARG 122 13.399 -0.910 24.970 1.00 0.00 H ATOM 973 N ASN 123 10.345 0.299 23.489 1.00 0.00 N ATOM 974 CA ASN 123 11.545 0.273 22.703 1.00 0.00 C ATOM 975 C ASN 123 11.627 1.488 21.836 1.00 0.00 C ATOM 976 O ASN 123 12.708 2.038 21.637 1.00 0.00 O ATOM 977 CB ASN 123 11.716 -0.994 21.831 1.00 0.00 C ATOM 978 CG ASN 123 11.494 -0.695 20.355 1.00 0.00 C ATOM 979 OD1 ASN 123 10.366 -0.616 19.875 1.00 0.00 O ATOM 980 ND2 ASN 123 12.612 -0.541 19.600 1.00 0.00 N TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 313 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 20.08 93.4 76 100.0 76 ARMSMC SECONDARY STRUCTURE . . 4.94 100.0 64 100.0 64 ARMSMC SURFACE . . . . . . . . 20.59 93.1 72 100.0 72 ARMSMC BURIED . . . . . . . . 5.83 100.0 4 100.0 4 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 88.74 38.2 34 100.0 34 ARMSSC1 RELIABLE SIDE CHAINS . 88.74 38.2 34 100.0 34 ARMSSC1 SECONDARY STRUCTURE . . 73.40 46.4 28 100.0 28 ARMSSC1 SURFACE . . . . . . . . 88.74 38.2 34 100.0 34 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 78.78 33.3 30 100.0 30 ARMSSC2 RELIABLE SIDE CHAINS . 76.07 30.4 23 100.0 23 ARMSSC2 SECONDARY STRUCTURE . . 84.99 29.2 24 100.0 24 ARMSSC2 SURFACE . . . . . . . . 78.78 33.3 30 100.0 30 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 67.61 50.0 14 100.0 14 ARMSSC3 RELIABLE SIDE CHAINS . 63.88 58.3 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 66.90 53.8 13 100.0 13 ARMSSC3 SURFACE . . . . . . . . 67.61 50.0 14 100.0 14 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 111.00 0.0 7 100.0 7 ARMSSC4 RELIABLE SIDE CHAINS . 111.00 0.0 7 100.0 7 ARMSSC4 SECONDARY STRUCTURE . . 114.48 0.0 6 100.0 6 ARMSSC4 SURFACE . . . . . . . . 111.00 0.0 7 100.0 7 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 2.05 (Number of atoms: 39) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 2.05 39 100.0 39 CRMSCA CRN = ALL/NP . . . . . 0.0527 CRMSCA SECONDARY STRUCTURE . . 1.76 32 100.0 32 CRMSCA SURFACE . . . . . . . . 2.10 37 100.0 37 CRMSCA BURIED . . . . . . . . 0.66 2 100.0 2 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 2.22 194 100.0 194 CRMSMC SECONDARY STRUCTURE . . 1.80 160 100.0 160 CRMSMC SURFACE . . . . . . . . 2.27 184 100.0 184 CRMSMC BURIED . . . . . . . . 0.74 10 100.0 10 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 3.23 157 100.0 157 CRMSSC RELIABLE SIDE CHAINS . 3.24 139 100.0 139 CRMSSC SECONDARY STRUCTURE . . 2.96 130 100.0 130 CRMSSC SURFACE . . . . . . . . 3.25 155 100.0 155 CRMSSC BURIED . . . . . . . . 0.86 2 100.0 2 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 2.78 313 100.0 313 CRMSALL SECONDARY STRUCTURE . . 2.44 258 100.0 258 CRMSALL SURFACE . . . . . . . . 2.82 303 100.0 303 CRMSALL BURIED . . . . . . . . 0.74 10 100.0 10 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.677 1.000 0.500 39 100.0 39 ERRCA SECONDARY STRUCTURE . . 1.500 1.000 0.500 32 100.0 32 ERRCA SURFACE . . . . . . . . 1.731 1.000 0.500 37 100.0 37 ERRCA BURIED . . . . . . . . 0.660 1.000 0.500 2 100.0 2 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.732 1.000 0.500 194 100.0 194 ERRMC SECONDARY STRUCTURE . . 1.513 1.000 0.500 160 100.0 160 ERRMC SURFACE . . . . . . . . 1.787 1.000 0.500 184 100.0 184 ERRMC BURIED . . . . . . . . 0.714 1.000 0.500 10 100.0 10 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.788 1.000 0.500 157 100.0 157 ERRSC RELIABLE SIDE CHAINS . 2.759 1.000 0.500 139 100.0 139 ERRSC SECONDARY STRUCTURE . . 2.589 1.000 0.500 130 100.0 130 ERRSC SURFACE . . . . . . . . 2.812 1.000 0.500 155 100.0 155 ERRSC BURIED . . . . . . . . 0.860 1.000 0.500 2 100.0 2 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.249 1.000 0.500 313 100.0 313 ERRALL SECONDARY STRUCTURE . . 2.035 1.000 0.500 258 100.0 258 ERRALL SURFACE . . . . . . . . 2.300 1.000 0.500 303 100.0 303 ERRALL BURIED . . . . . . . . 0.714 1.000 0.500 10 100.0 10 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 15 30 33 38 39 39 39 DISTCA CA (P) 38.46 76.92 84.62 97.44 100.00 39 DISTCA CA (RMS) 0.78 1.18 1.34 1.88 2.05 DISTCA ALL (N) 77 174 230 298 313 313 313 DISTALL ALL (P) 24.60 55.59 73.48 95.21 100.00 313 DISTALL ALL (RMS) 0.77 1.22 1.61 2.33 2.78 DISTALL END of the results output