####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 39 ( 313), selected 39 , name T0586TS103_1-D2 # Molecule2: number of CA atoms 39 ( 313), selected 39 , name T0586-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0586TS103_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 39 85 - 123 2.89 2.89 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 33 85 - 117 1.96 3.23 LCS_AVERAGE: 82.25 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 26 85 - 110 0.87 3.57 LCS_AVERAGE: 61.60 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 39 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT D 85 D 85 26 33 39 12 23 25 26 29 29 32 33 36 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT Q 86 Q 86 26 33 39 11 23 25 26 29 29 32 33 36 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 87 L 87 26 33 39 15 23 25 26 29 29 32 33 36 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 88 K 88 26 33 39 18 23 25 26 29 29 32 33 36 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 89 K 89 26 33 39 18 23 25 26 29 29 32 33 36 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 90 E 90 26 33 39 18 23 25 26 29 29 32 33 36 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 91 L 91 26 33 39 18 23 25 26 29 29 32 33 36 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 92 A 92 26 33 39 18 23 25 26 29 29 32 33 36 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT D 93 D 93 26 33 39 18 23 25 26 29 29 32 33 36 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 94 A 94 26 33 39 18 23 25 26 29 29 32 33 36 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 95 I 95 26 33 39 18 23 25 26 29 29 32 33 36 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT T 96 T 96 26 33 39 18 23 25 26 29 29 32 33 36 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 97 E 97 26 33 39 18 23 25 26 29 29 32 33 36 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT R 98 R 98 26 33 39 18 23 25 26 29 29 32 33 36 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT F 99 F 99 26 33 39 18 23 25 26 29 29 32 33 36 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 100 L 100 26 33 39 18 23 25 26 29 29 32 33 36 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 101 E 101 26 33 39 18 23 25 26 29 29 32 33 36 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 102 E 102 26 33 39 18 23 25 26 29 29 32 33 36 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 103 A 103 26 33 39 18 23 25 26 29 29 32 33 36 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 104 K 104 26 33 39 18 23 25 26 29 29 32 33 36 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT S 105 S 105 26 33 39 18 23 25 26 29 29 32 33 36 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 106 I 106 26 33 39 15 23 25 26 29 29 32 33 36 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT G 107 G 107 26 33 39 11 23 25 26 29 29 32 33 36 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 108 L 108 26 33 39 8 22 25 26 29 29 32 33 36 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT D 109 D 109 26 33 39 8 22 25 26 29 29 32 33 36 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT D 110 D 110 26 33 39 9 17 21 26 29 29 32 33 36 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT Q 111 Q 111 21 33 39 8 17 18 22 29 29 32 33 36 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT T 112 T 112 20 33 39 9 17 18 22 29 29 32 33 36 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT A 113 A 113 20 33 39 9 17 18 22 29 29 32 33 36 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 114 I 114 20 33 39 9 17 18 22 23 29 32 33 36 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT E 115 E 115 20 33 39 9 17 18 22 22 28 32 33 36 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 116 L 116 20 33 39 9 17 18 22 22 28 32 33 36 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT L 117 L 117 20 33 39 9 17 18 22 22 26 28 33 36 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT I 118 I 118 20 27 39 9 17 18 22 22 26 28 32 36 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT K 119 K 119 20 27 39 9 17 18 22 22 26 28 32 36 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT R 120 R 120 20 27 39 9 17 18 22 22 26 28 32 36 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT S 121 S 121 20 27 39 9 14 18 22 22 26 28 30 34 38 39 39 39 39 39 39 39 39 39 39 LCS_GDT R 122 R 122 20 27 39 9 17 18 22 22 26 28 30 33 37 39 39 39 39 39 39 39 39 39 39 LCS_GDT N 123 N 123 20 27 39 9 17 18 22 22 26 28 31 35 38 39 39 39 39 39 39 39 39 39 39 LCS_AVERAGE LCS_A: 81.28 ( 61.60 82.25 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 18 23 25 26 29 29 32 33 36 38 39 39 39 39 39 39 39 39 39 39 GDT PERCENT_AT 46.15 58.97 64.10 66.67 74.36 74.36 82.05 84.62 92.31 97.44 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.39 0.53 0.70 0.87 1.31 1.31 1.78 1.96 2.46 2.75 2.89 2.89 2.89 2.89 2.89 2.89 2.89 2.89 2.89 2.89 GDT RMS_ALL_AT 3.81 3.84 3.60 3.57 3.51 3.51 3.31 3.23 2.98 2.89 2.89 2.89 2.89 2.89 2.89 2.89 2.89 2.89 2.89 2.89 # Checking swapping # possible swapping detected: D 85 D 85 # possible swapping detected: E 90 E 90 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA D 85 D 85 2.003 0 0.029 0.072 3.201 70.833 63.095 LGA Q 86 Q 86 2.327 0 0.020 1.432 6.810 64.762 48.413 LGA L 87 L 87 1.571 0 0.026 1.423 5.400 77.143 61.786 LGA K 88 K 88 0.810 0 0.050 0.844 4.338 85.952 74.127 LGA K 89 K 89 1.689 0 0.016 0.918 3.958 75.000 63.598 LGA E 90 E 90 1.631 0 0.039 0.863 2.925 77.143 71.217 LGA L 91 L 91 0.682 0 0.028 0.074 0.970 92.857 91.667 LGA A 92 A 92 1.081 0 0.012 0.015 1.453 83.690 83.238 LGA D 93 D 93 1.547 0 0.022 0.057 2.723 79.286 71.131 LGA A 94 A 94 0.737 0 0.036 0.044 0.897 90.476 90.476 LGA I 95 I 95 0.684 0 0.019 0.075 1.409 90.476 87.083 LGA T 96 T 96 1.009 0 0.033 0.070 1.208 83.690 82.721 LGA E 97 E 97 1.126 0 0.028 0.668 1.517 85.952 83.492 LGA R 98 R 98 0.594 0 0.063 1.767 8.816 90.476 62.857 LGA F 99 F 99 1.231 0 0.034 0.090 2.926 83.690 70.303 LGA L 100 L 100 1.470 0 0.067 1.058 2.663 79.286 74.107 LGA E 101 E 101 1.193 0 0.014 1.176 4.368 81.429 70.106 LGA E 102 E 102 0.967 0 0.057 0.210 2.066 85.952 79.683 LGA A 103 A 103 1.373 0 0.037 0.036 1.786 81.429 79.714 LGA K 104 K 104 1.415 0 0.039 0.162 2.153 81.429 74.868 LGA S 105 S 105 1.140 0 0.024 0.684 2.620 81.429 77.381 LGA I 106 I 106 0.784 0 0.025 0.116 0.873 90.476 91.667 LGA G 107 G 107 1.174 0 0.148 0.148 1.174 85.952 85.952 LGA L 108 L 108 0.617 0 0.061 1.412 2.860 92.857 81.131 LGA D 109 D 109 0.548 0 0.053 1.024 2.129 92.857 83.988 LGA D 110 D 110 1.477 0 0.041 0.144 2.791 77.381 72.143 LGA Q 111 Q 111 2.281 0 0.012 1.175 6.657 61.190 48.095 LGA T 112 T 112 2.500 0 0.039 0.072 2.910 59.048 60.408 LGA A 113 A 113 2.502 0 0.034 0.037 3.513 53.810 56.000 LGA I 114 I 114 3.316 0 0.037 0.062 4.203 46.905 52.083 LGA E 115 E 115 3.871 0 0.031 0.161 4.664 38.810 39.259 LGA L 116 L 116 4.085 0 0.020 0.255 4.945 35.833 42.976 LGA L 117 L 117 4.918 0 0.015 0.065 5.890 29.048 28.929 LGA I 118 I 118 5.906 0 0.024 0.058 6.740 19.524 19.940 LGA K 119 K 119 6.095 0 0.008 1.097 7.151 17.262 16.931 LGA R 120 R 120 5.959 0 0.030 0.340 6.878 17.381 20.519 LGA S 121 S 121 7.311 0 0.060 0.078 8.049 8.810 8.333 LGA R 122 R 122 8.028 0 0.175 0.928 9.415 4.524 10.433 LGA N 123 N 123 7.395 0 0.511 1.363 9.796 5.238 15.774 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 39 156 156 100.00 313 313 100.00 39 SUMMARY(RMSD_GDC): 2.886 2.965 3.247 65.623 61.426 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 39 39 4.0 33 1.96 77.564 81.729 1.604 LGA_LOCAL RMSD: 1.957 Number of atoms: 33 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 3.229 Number of assigned atoms: 39 Std_ASGN_ATOMS RMSD: 2.886 Standard rmsd on all 39 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.124542 * X + -0.973280 * Y + -0.192914 * Z + 4.105183 Y_new = 0.328252 * X + 0.143064 * Y + -0.933693 * Z + 8.756448 Z_new = 0.936344 * X + -0.179609 * Y + 0.301664 * Z + 14.815277 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.933428 -1.212067 -0.537026 [DEG: 110.7773 -69.4463 -30.7693 ] ZXZ: -0.203747 1.264359 1.760314 [DEG: -11.6738 72.4424 100.8585 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0586TS103_1-D2 REMARK 2: T0586-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0586TS103_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 39 39 4.0 33 1.96 81.729 2.89 REMARK ---------------------------------------------------------- MOLECULE T0586TS103_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0586 REMARK MODEL 1 REMARK PARENT N/A ATOM 668 N ASP 85 2.988 19.485 16.395 1.00 0.00 N ATOM 669 CA ASP 85 2.794 18.506 17.467 1.00 0.00 C ATOM 670 CB ASP 85 3.274 19.073 18.805 1.00 0.00 C ATOM 671 CG ASP 85 4.785 19.171 18.887 1.00 0.00 C ATOM 672 OD1 ASP 85 5.468 18.557 18.040 1.00 0.00 O ATOM 673 OD2 ASP 85 5.286 19.863 19.798 1.00 0.00 O ATOM 674 O ASP 85 1.051 16.866 17.717 1.00 0.00 O ATOM 675 C ASP 85 1.333 18.078 17.570 1.00 0.00 C ATOM 676 N GLN 86 0.405 19.045 17.488 1.00 0.00 N ATOM 677 CA GLN 86 -1.002 18.715 17.525 1.00 0.00 C ATOM 678 CB GLN 86 -1.848 19.989 17.563 1.00 0.00 C ATOM 679 CG GLN 86 -1.756 20.758 18.870 1.00 0.00 C ATOM 680 CD GLN 86 -2.514 22.069 18.830 1.00 0.00 C ATOM 681 OE1 GLN 86 -2.663 22.680 17.770 1.00 0.00 O ATOM 682 NE2 GLN 86 -2.998 22.507 19.986 1.00 0.00 N ATOM 683 O GLN 86 -2.200 16.933 16.428 1.00 0.00 O ATOM 684 C GLN 86 -1.372 17.847 16.309 1.00 0.00 C ATOM 685 N LEU 87 -0.948 18.098 15.022 1.00 0.00 N ATOM 686 CA LEU 87 -1.169 17.274 13.837 1.00 0.00 C ATOM 687 CB LEU 87 -0.680 17.938 12.572 1.00 0.00 C ATOM 688 CG LEU 87 -1.377 19.260 12.237 1.00 0.00 C ATOM 689 CD1 LEU 87 -0.603 19.918 11.103 1.00 0.00 C ATOM 690 CD2 LEU 87 -2.826 19.034 11.870 1.00 0.00 C ATOM 691 O LEU 87 -1.163 14.874 13.656 1.00 0.00 O ATOM 692 C LEU 87 -0.567 15.885 14.041 1.00 0.00 C ATOM 693 N LYS 88 0.600 15.830 14.683 1.00 0.00 N ATOM 694 CA LYS 88 1.258 14.552 14.925 1.00 0.00 C ATOM 695 CB LYS 88 2.676 14.765 15.458 1.00 0.00 C ATOM 696 CG LYS 88 3.552 13.525 15.403 1.00 0.00 C ATOM 697 CD LYS 88 3.468 12.730 16.696 1.00 0.00 C ATOM 698 CE LYS 88 4.425 11.550 16.684 1.00 0.00 C ATOM 699 NZ LYS 88 4.269 10.696 17.893 1.00 0.00 N ATOM 700 O LYS 88 0.471 12.407 15.685 1.00 0.00 O ATOM 701 C LYS 88 0.470 13.630 15.874 1.00 0.00 C ATOM 702 N LYS 89 -0.231 14.197 16.855 1.00 0.00 N ATOM 703 CA LYS 89 -1.067 13.397 17.738 1.00 0.00 C ATOM 704 CB LYS 89 -1.664 14.266 18.846 1.00 0.00 C ATOM 705 CG LYS 89 -2.510 13.499 19.850 1.00 0.00 C ATOM 706 CD LYS 89 -3.010 14.410 20.959 1.00 0.00 C ATOM 707 CE LYS 89 -3.756 13.622 22.025 1.00 0.00 C ATOM 708 NZ LYS 89 -5.003 13.008 21.490 1.00 0.00 N ATOM 709 O LYS 89 -2.430 11.513 17.093 1.00 0.00 O ATOM 710 C LYS 89 -2.180 12.709 16.930 1.00 0.00 C ATOM 711 N GLU 90 -2.835 13.452 16.039 1.00 0.00 N ATOM 712 CA GLU 90 -3.885 12.924 15.171 1.00 0.00 C ATOM 713 CB GLU 90 -4.531 14.049 14.360 1.00 0.00 C ATOM 714 CG GLU 90 -5.672 13.593 13.465 1.00 0.00 C ATOM 715 CD GLU 90 -6.308 14.737 12.700 1.00 0.00 C ATOM 716 OE1 GLU 90 -5.839 15.885 12.853 1.00 0.00 O ATOM 717 OE2 GLU 90 -7.273 14.486 11.950 1.00 0.00 O ATOM 718 O GLU 90 -3.948 10.790 14.060 1.00 0.00 O ATOM 719 C GLU 90 -3.331 11.844 14.229 1.00 0.00 C ATOM 720 N LEU 91 -2.167 12.089 13.611 1.00 0.00 N ATOM 721 CA LEU 91 -1.552 11.089 12.719 1.00 0.00 C ATOM 722 CB LEU 91 -0.307 11.669 12.044 1.00 0.00 C ATOM 723 CG LEU 91 -0.548 12.775 11.014 1.00 0.00 C ATOM 724 CD1 LEU 91 0.770 13.383 10.559 1.00 0.00 C ATOM 725 CD2 LEU 91 -1.322 12.237 9.820 1.00 0.00 C ATOM 726 O LEU 91 -1.419 8.706 12.961 1.00 0.00 O ATOM 727 C LEU 91 -1.197 9.804 13.464 1.00 0.00 C ATOM 728 N ALA 92 -0.655 9.963 14.647 1.00 0.00 N ATOM 729 CA ALA 92 -0.272 8.805 15.444 1.00 0.00 C ATOM 730 CB ALA 92 0.477 9.246 16.692 1.00 0.00 C ATOM 731 O ALA 92 -1.433 6.720 15.761 1.00 0.00 O ATOM 732 C ALA 92 -1.477 7.966 15.832 1.00 0.00 C ATOM 733 N ASP 93 -2.555 8.650 16.247 1.00 0.00 N ATOM 734 CA ASP 93 -3.811 7.965 16.560 1.00 0.00 C ATOM 735 CB ASP 93 -4.808 8.995 17.095 1.00 0.00 C ATOM 736 CG ASP 93 -4.457 9.478 18.488 1.00 0.00 C ATOM 737 OD1 ASP 93 -3.617 8.831 19.147 1.00 0.00 O ATOM 738 OD2 ASP 93 -5.021 10.505 18.921 1.00 0.00 O ATOM 739 O ASP 93 -4.961 6.197 15.482 1.00 0.00 O ATOM 740 C ASP 93 -4.381 7.262 15.348 1.00 0.00 C ATOM 741 N ALA 94 -4.247 7.846 14.173 1.00 0.00 N ATOM 742 CA ALA 94 -4.663 7.155 12.966 1.00 0.00 C ATOM 743 CB ALA 94 -4.467 8.047 11.748 1.00 0.00 C ATOM 744 O ALA 94 -4.450 4.768 12.544 1.00 0.00 O ATOM 745 C ALA 94 -3.878 5.841 12.831 1.00 0.00 C ATOM 746 N ILE 95 -2.560 5.917 13.062 1.00 0.00 N ATOM 747 CA ILE 95 -1.693 4.723 12.996 1.00 0.00 C ATOM 748 CB ILE 95 -0.204 5.106 13.070 1.00 0.00 C ATOM 749 CG1 ILE 95 0.207 5.896 11.826 1.00 0.00 C ATOM 750 CG2 ILE 95 0.656 3.868 13.264 1.00 0.00 C ATOM 751 CD1 ILE 95 1.567 6.548 11.938 1.00 0.00 C ATOM 752 O ILE 95 -2.192 2.541 13.840 1.00 0.00 O ATOM 753 C ILE 95 -2.078 3.737 14.090 1.00 0.00 C ATOM 754 N THR 96 -2.299 4.249 15.300 1.00 0.00 N ATOM 755 CA THR 96 -2.702 3.405 16.419 1.00 0.00 C ATOM 756 CB THR 96 -2.921 4.122 17.716 1.00 0.00 C ATOM 757 CG2 THR 96 -1.626 4.811 18.158 1.00 0.00 C ATOM 758 OG1 THR 96 -3.845 5.203 17.550 1.00 0.00 O ATOM 759 O THR 96 -4.139 1.483 16.372 1.00 0.00 O ATOM 760 C THR 96 -4.004 2.676 16.097 1.00 0.00 C ATOM 761 N GLU 97 -4.957 3.393 15.511 1.00 0.00 N ATOM 762 CA GLU 97 -6.239 2.799 15.156 1.00 0.00 C ATOM 763 CB GLU 97 -7.185 3.870 14.611 1.00 0.00 C ATOM 764 CG GLU 97 -8.567 3.351 14.250 1.00 0.00 C ATOM 765 CD GLU 97 -9.486 4.447 13.744 1.00 0.00 C ATOM 766 OE1 GLU 97 -9.286 5.617 14.133 1.00 0.00 O ATOM 767 OE2 GLU 97 -10.405 4.135 12.958 1.00 0.00 O ATOM 768 O GLU 97 -6.689 0.616 14.261 1.00 0.00 O ATOM 769 C GLU 97 -6.064 1.704 14.136 1.00 0.00 C ATOM 770 N ARG 98 -5.195 1.918 13.152 1.00 0.00 N ATOM 771 CA ARG 98 -5.004 0.919 12.090 1.00 0.00 C ATOM 772 CB ARG 98 -4.158 1.523 10.967 1.00 0.00 C ATOM 773 CG ARG 98 -4.824 2.682 10.244 1.00 0.00 C ATOM 774 CD ARG 98 -6.013 2.209 9.422 1.00 0.00 C ATOM 775 NE ARG 98 -7.195 1.983 10.251 1.00 0.00 N ATOM 776 CZ ARG 98 -7.953 2.953 10.752 1.00 0.00 C ATOM 777 NH1 ARG 98 -9.010 2.654 11.494 1.00 0.00 H ATOM 778 NH2 ARG 98 -7.653 4.223 10.508 1.00 0.00 H ATOM 779 O ARG 98 -4.854 -1.462 12.351 1.00 0.00 O ATOM 780 C ARG 98 -4.378 -0.362 12.631 1.00 0.00 C ATOM 781 N PHE 99 -3.308 -0.217 13.407 1.00 0.00 N ATOM 782 CA PHE 99 -2.594 -1.406 14.010 1.00 0.00 C ATOM 783 CB PHE 99 -1.376 -0.976 14.829 1.00 0.00 C ATOM 784 CG PHE 99 -0.582 -2.125 15.382 1.00 0.00 C ATOM 785 CD1 PHE 99 0.228 -2.888 14.558 1.00 0.00 C ATOM 786 CD2 PHE 99 -0.644 -2.443 16.729 1.00 0.00 C ATOM 787 CE1 PHE 99 0.959 -3.945 15.068 1.00 0.00 C ATOM 788 CE2 PHE 99 0.088 -3.500 17.237 1.00 0.00 C ATOM 789 CZ PHE 99 0.885 -4.249 16.414 1.00 0.00 C ATOM 790 O PHE 99 -3.583 -3.461 14.740 1.00 0.00 O ATOM 791 C PHE 99 -3.553 -2.235 14.846 1.00 0.00 C ATOM 792 N LEU 100 -4.343 -1.566 15.681 1.00 0.00 N ATOM 793 CA LEU 100 -5.304 -2.258 16.530 1.00 0.00 C ATOM 794 CB LEU 100 -5.971 -1.250 17.470 1.00 0.00 C ATOM 795 CG LEU 100 -6.849 -1.838 18.578 1.00 0.00 C ATOM 796 CD1 LEU 100 -7.075 -0.815 19.683 1.00 0.00 C ATOM 797 CD2 LEU 100 -8.181 -2.309 18.015 1.00 0.00 C ATOM 798 O LEU 100 -6.597 -4.180 15.905 1.00 0.00 O ATOM 799 C LEU 100 -6.300 -3.010 15.654 1.00 0.00 C ATOM 800 N GLU 101 -6.814 -2.341 14.628 1.00 0.00 N ATOM 801 CA GLU 101 -7.776 -2.964 13.720 1.00 0.00 C ATOM 802 CB GLU 101 -8.099 -2.038 12.540 1.00 0.00 C ATOM 803 CG GLU 101 -9.377 -2.407 11.781 1.00 0.00 C ATOM 804 CD GLU 101 -9.577 -1.577 10.529 1.00 0.00 C ATOM 805 OE1 GLU 101 -8.744 -0.664 10.246 1.00 0.00 O ATOM 806 OE2 GLU 101 -10.581 -1.840 9.816 1.00 0.00 O ATOM 807 O GLU 101 -7.891 -5.221 12.899 1.00 0.00 O ATOM 808 C GLU 101 -7.195 -4.217 13.057 1.00 0.00 C ATOM 809 N GLU 102 -5.926 -4.154 12.670 1.00 0.00 N ATOM 810 CA GLU 102 -5.271 -5.289 12.031 1.00 0.00 C ATOM 811 CB GLU 102 -3.868 -4.950 11.525 1.00 0.00 C ATOM 812 CG GLU 102 -3.189 -6.082 10.770 1.00 0.00 C ATOM 813 CD GLU 102 -1.815 -5.699 10.257 1.00 0.00 C ATOM 814 OE1 GLU 102 -1.384 -4.556 10.511 1.00 0.00 O ATOM 815 OE2 GLU 102 -1.170 -6.544 9.601 1.00 0.00 O ATOM 816 O GLU 102 -5.581 -7.601 12.593 1.00 0.00 O ATOM 817 C GLU 102 -5.220 -6.486 12.974 1.00 0.00 C ATOM 818 N ALA 103 -4.773 -6.255 14.204 1.00 0.00 N ATOM 819 CA ALA 103 -4.686 -7.319 15.181 1.00 0.00 C ATOM 820 CB ALA 103 -4.025 -6.773 16.464 1.00 0.00 C ATOM 821 O ALA 103 -6.227 -9.096 15.566 1.00 0.00 O ATOM 822 C ALA 103 -6.050 -7.881 15.466 1.00 0.00 C ATOM 823 N LYS 104 -7.033 -6.996 15.601 1.00 0.00 N ATOM 824 CA LYS 104 -8.401 -7.423 15.876 1.00 0.00 C ATOM 825 CB LYS 104 -9.295 -6.210 16.144 1.00 0.00 C ATOM 826 CG LYS 104 -10.720 -6.563 16.537 1.00 0.00 C ATOM 827 CD LYS 104 -11.518 -5.320 16.892 1.00 0.00 C ATOM 828 CE LYS 104 -12.949 -5.672 17.267 1.00 0.00 C ATOM 829 NZ LYS 104 -13.746 -4.463 17.615 1.00 0.00 N ATOM 830 O LYS 104 -9.494 -9.312 14.922 1.00 0.00 O ATOM 831 C LYS 104 -8.878 -8.289 14.710 1.00 0.00 C ATOM 832 N SER 105 -8.530 -7.919 13.488 1.00 0.00 N ATOM 833 CA SER 105 -8.858 -8.759 12.331 1.00 0.00 C ATOM 834 CB SER 105 -8.434 -8.069 11.033 1.00 0.00 C ATOM 835 OG SER 105 -9.157 -6.868 10.833 1.00 0.00 O ATOM 836 O SER 105 -8.694 -11.087 11.776 1.00 0.00 O ATOM 837 C SER 105 -8.196 -10.131 12.374 1.00 0.00 C ATOM 838 N ILE 106 -7.075 -10.229 13.081 1.00 0.00 N ATOM 839 CA ILE 106 -6.333 -11.524 13.203 1.00 0.00 C ATOM 840 CB ILE 106 -4.814 -11.318 13.049 1.00 0.00 C ATOM 841 CG1 ILE 106 -4.284 -10.409 14.161 1.00 0.00 C ATOM 842 CG2 ILE 106 -4.487 -10.772 11.668 1.00 0.00 C ATOM 843 CD1 ILE 106 -2.774 -10.348 14.230 1.00 0.00 C ATOM 844 O ILE 106 -5.983 -13.229 14.863 1.00 0.00 O ATOM 845 C ILE 106 -6.622 -12.229 14.532 1.00 0.00 C ATOM 846 N GLY 107 -7.583 -11.706 15.287 1.00 0.00 N ATOM 847 CA GLY 107 -7.944 -12.298 16.569 1.00 0.00 C ATOM 848 O GLY 107 -7.645 -11.924 18.941 1.00 0.00 O ATOM 849 C GLY 107 -7.299 -11.611 17.802 1.00 0.00 C ATOM 850 N LEU 108 -6.373 -10.688 17.559 1.00 0.00 N ATOM 851 CA LEU 108 -5.708 -9.981 18.648 1.00 0.00 C ATOM 852 CB LEU 108 -4.508 -9.178 18.138 1.00 0.00 C ATOM 853 CG LEU 108 -3.358 -9.986 17.538 1.00 0.00 C ATOM 854 CD1 LEU 108 -2.297 -9.063 16.958 1.00 0.00 C ATOM 855 CD2 LEU 108 -2.744 -10.908 18.581 1.00 0.00 C ATOM 856 O LEU 108 -7.358 -8.221 18.729 1.00 0.00 O ATOM 857 C LEU 108 -6.700 -9.043 19.368 1.00 0.00 C ATOM 858 N ASP 109 -6.797 -9.173 20.688 1.00 0.00 N ATOM 859 CA ASP 109 -7.701 -8.335 21.466 1.00 0.00 C ATOM 860 CB ASP 109 -7.710 -8.729 22.944 1.00 0.00 C ATOM 861 CG ASP 109 -8.430 -10.040 23.195 1.00 0.00 C ATOM 862 OD1 ASP 109 -9.113 -10.529 22.268 1.00 0.00 O ATOM 863 OD2 ASP 109 -8.314 -10.578 24.315 1.00 0.00 O ATOM 864 O ASP 109 -6.109 -6.548 21.187 1.00 0.00 O ATOM 865 C ASP 109 -7.285 -6.875 21.312 1.00 0.00 C ATOM 866 N ASP 110 -8.276 -5.988 21.344 1.00 0.00 N ATOM 867 CA ASP 110 -7.985 -4.569 21.184 1.00 0.00 C ATOM 868 CB ASP 110 -9.274 -3.748 21.245 1.00 0.00 C ATOM 869 CG ASP 110 -10.135 -3.921 20.009 1.00 0.00 C ATOM 870 OD1 ASP 110 -9.622 -4.447 18.998 1.00 0.00 O ATOM 871 OD2 ASP 110 -11.320 -3.531 20.051 1.00 0.00 O ATOM 872 O ASP 110 -6.230 -3.168 22.006 1.00 0.00 O ATOM 873 C ASP 110 -7.057 -4.030 22.271 1.00 0.00 C ATOM 874 N GLN 111 -7.201 -4.519 23.477 1.00 0.00 N ATOM 875 CA GLN 111 -6.274 -4.108 24.541 1.00 0.00 C ATOM 876 CB GLN 111 -6.766 -4.601 25.903 1.00 0.00 C ATOM 877 CG GLN 111 -8.078 -3.981 26.354 1.00 0.00 C ATOM 878 CD GLN 111 -7.984 -2.478 26.523 1.00 0.00 C ATOM 879 OE1 GLN 111 -7.048 -1.972 27.146 1.00 0.00 O ATOM 880 NE2 GLN 111 -8.952 -1.757 25.969 1.00 0.00 N ATOM 881 O GLN 111 -3.911 -3.655 24.305 1.00 0.00 O ATOM 882 C GLN 111 -4.828 -4.469 24.161 1.00 0.00 C ATOM 883 N THR 112 -4.610 -5.686 23.680 1.00 0.00 N ATOM 884 CA THR 112 -3.293 -6.180 23.284 1.00 0.00 C ATOM 885 CB THR 112 -3.267 -7.706 23.074 1.00 0.00 C ATOM 886 CG2 THR 112 -1.861 -8.173 22.730 1.00 0.00 C ATOM 887 OG1 THR 112 -3.685 -8.364 24.277 1.00 0.00 O ATOM 888 O THR 112 -1.556 -5.251 21.960 1.00 0.00 O ATOM 889 C THR 112 -2.753 -5.493 22.046 1.00 0.00 C ATOM 890 N ALA 113 -3.633 -5.210 21.074 1.00 0.00 N ATOM 891 CA ALA 113 -3.260 -4.369 19.930 1.00 0.00 C ATOM 892 CB ALA 113 -4.448 -4.187 18.996 1.00 0.00 C ATOM 893 O ALA 113 -1.752 -2.499 19.820 1.00 0.00 O ATOM 894 C ALA 113 -2.710 -3.024 20.394 1.00 0.00 C ATOM 895 N ILE 114 -3.329 -2.463 21.473 1.00 0.00 N ATOM 896 CA ILE 114 -2.932 -1.190 22.063 1.00 0.00 C ATOM 897 CB ILE 114 -3.852 -0.724 23.207 1.00 0.00 C ATOM 898 CG1 ILE 114 -5.223 -0.323 22.659 1.00 0.00 C ATOM 899 CG2 ILE 114 -3.200 0.408 23.987 1.00 0.00 C ATOM 900 CD1 ILE 114 -6.277 -0.138 23.728 1.00 0.00 C ATOM 901 O ILE 114 -0.656 -0.456 22.343 1.00 0.00 O ATOM 902 C ILE 114 -1.507 -1.309 22.617 1.00 0.00 C ATOM 903 N GLU 115 -1.251 -2.402 23.325 1.00 0.00 N ATOM 904 CA GLU 115 0.054 -2.695 23.917 1.00 0.00 C ATOM 905 CB GLU 115 -0.015 -3.975 24.752 1.00 0.00 C ATOM 906 CG GLU 115 1.306 -4.376 25.383 1.00 0.00 C ATOM 907 CD GLU 115 1.192 -5.631 26.228 1.00 0.00 C ATOM 908 OE1 GLU 115 0.089 -5.897 26.751 1.00 0.00 O ATOM 909 OE2 GLU 115 2.205 -6.349 26.366 1.00 0.00 O ATOM 910 O GLU 115 2.195 -2.392 22.877 1.00 0.00 O ATOM 911 C GLU 115 1.080 -2.912 22.811 1.00 0.00 C ATOM 912 N LEU 116 0.703 -3.679 21.793 1.00 0.00 N ATOM 913 CA LEU 116 1.602 -3.951 20.680 1.00 0.00 C ATOM 914 CB LEU 116 0.991 -5.022 19.772 1.00 0.00 C ATOM 915 CG LEU 116 0.915 -6.437 20.351 1.00 0.00 C ATOM 916 CD1 LEU 116 0.129 -7.354 19.424 1.00 0.00 C ATOM 917 CD2 LEU 116 2.308 -6.996 20.592 1.00 0.00 C ATOM 918 O LEU 116 3.075 -2.469 19.492 1.00 0.00 O ATOM 919 C LEU 116 1.925 -2.688 19.878 1.00 0.00 C ATOM 920 N LEU 117 0.913 -1.863 19.631 1.00 0.00 N ATOM 921 CA LEU 117 1.110 -0.630 18.878 1.00 0.00 C ATOM 922 CB LEU 117 -0.236 0.086 18.739 1.00 0.00 C ATOM 923 CG LEU 117 -0.216 1.430 18.007 1.00 0.00 C ATOM 924 CD1 LEU 117 0.262 1.256 16.574 1.00 0.00 C ATOM 925 CD2 LEU 117 -1.593 2.076 18.031 1.00 0.00 C ATOM 926 O LEU 117 3.029 0.807 18.919 1.00 0.00 O ATOM 927 C LEU 117 2.110 0.295 19.561 1.00 0.00 C ATOM 928 N ILE 118 1.932 0.518 20.864 1.00 0.00 N ATOM 929 CA ILE 118 2.820 1.382 21.632 1.00 0.00 C ATOM 930 CB ILE 118 2.356 1.623 23.081 1.00 0.00 C ATOM 931 CG1 ILE 118 1.065 2.442 23.099 1.00 0.00 C ATOM 932 CG2 ILE 118 3.461 2.288 23.890 1.00 0.00 C ATOM 933 CD1 ILE 118 0.398 2.501 24.455 1.00 0.00 C ATOM 934 O ILE 118 5.195 1.552 21.397 1.00 0.00 O ATOM 935 C ILE 118 4.242 0.807 21.634 1.00 0.00 C ATOM 936 N LYS 119 4.374 -0.494 21.865 1.00 0.00 N ATOM 937 CA LYS 119 5.694 -1.110 21.885 1.00 0.00 C ATOM 938 CB LYS 119 5.587 -2.554 22.374 1.00 0.00 C ATOM 939 CG LYS 119 5.255 -2.687 23.851 1.00 0.00 C ATOM 940 CD LYS 119 5.145 -4.146 24.261 1.00 0.00 C ATOM 941 CE LYS 119 4.798 -4.280 25.737 1.00 0.00 C ATOM 942 NZ LYS 119 4.644 -5.703 26.145 1.00 0.00 N ATOM 943 O LYS 119 7.558 -0.665 20.452 1.00 0.00 O ATOM 944 C LYS 119 6.380 -1.004 20.527 1.00 0.00 C ATOM 945 N ARG 120 5.631 -1.292 19.457 1.00 0.00 N ATOM 946 CA ARG 120 6.195 -1.226 18.112 1.00 0.00 C ATOM 947 CB ARG 120 5.270 -1.787 17.029 1.00 0.00 C ATOM 948 CG ARG 120 5.905 -1.863 15.651 1.00 0.00 C ATOM 949 CD ARG 120 4.950 -2.478 14.639 1.00 0.00 C ATOM 950 NE ARG 120 5.517 -2.490 13.291 1.00 0.00 N ATOM 951 CZ ARG 120 6.307 -3.451 12.823 1.00 0.00 C ATOM 952 NH1 ARG 120 6.774 -3.378 11.584 1.00 0.00 H ATOM 953 NH2 ARG 120 6.626 -4.481 13.594 1.00 0.00 H ATOM 954 O ARG 120 7.742 0.428 17.311 1.00 0.00 O ATOM 955 C ARG 120 6.629 0.192 17.800 1.00 0.00 C ATOM 956 N SER 121 5.735 1.178 18.082 1.00 0.00 N ATOM 957 CA SER 121 6.052 2.581 17.872 1.00 0.00 C ATOM 958 CB SER 121 4.835 3.452 18.199 1.00 0.00 C ATOM 959 OG SER 121 5.129 4.825 18.018 1.00 0.00 O ATOM 960 O SER 121 8.165 3.666 18.221 1.00 0.00 O ATOM 961 C SER 121 7.253 3.004 18.716 1.00 0.00 C ATOM 962 N ARG 122 7.426 2.370 19.874 1.00 0.00 N ATOM 963 CA ARG 122 8.513 2.710 20.786 1.00 0.00 C ATOM 964 CB ARG 122 8.259 2.026 22.129 1.00 0.00 C ATOM 965 CG ARG 122 9.338 2.281 23.169 1.00 0.00 C ATOM 966 CD ARG 122 9.012 1.588 24.482 1.00 0.00 C ATOM 967 NE ARG 122 10.063 1.782 25.478 1.00 0.00 N ATOM 968 CZ ARG 122 10.033 1.274 26.706 1.00 0.00 C ATOM 969 NH1 ARG 122 11.035 1.505 27.545 1.00 0.00 H ATOM 970 NH2 ARG 122 9.003 0.535 27.092 1.00 0.00 H ATOM 971 O ARG 122 10.854 2.922 20.383 1.00 0.00 O ATOM 972 C ARG 122 9.854 2.263 20.232 1.00 0.00 C ATOM 973 N ASN 123 9.851 1.049 19.676 1.00 0.00 N ATOM 974 CA ASN 123 11.105 0.396 19.313 1.00 0.00 C ATOM 975 CB ASN 123 11.367 -0.805 20.223 1.00 0.00 C ATOM 976 CG ASN 123 10.318 -1.888 20.075 1.00 0.00 C ATOM 977 ND2 ASN 123 9.999 -2.557 21.177 1.00 0.00 N ATOM 978 OD1 ASN 123 9.800 -2.119 18.982 1.00 0.00 O ATOM 979 O ASN 123 12.142 -0.677 17.438 1.00 0.00 O ATOM 980 C ASN 123 11.152 -0.052 17.848 1.00 0.00 C TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 313 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 21.43 97.4 76 100.0 76 ARMSMC SECONDARY STRUCTURE . . 5.36 100.0 64 100.0 64 ARMSMC SURFACE . . . . . . . . 21.98 97.2 72 100.0 72 ARMSMC BURIED . . . . . . . . 5.86 100.0 4 100.0 4 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 67.13 67.6 34 100.0 34 ARMSSC1 RELIABLE SIDE CHAINS . 67.13 67.6 34 100.0 34 ARMSSC1 SECONDARY STRUCTURE . . 57.51 75.0 28 100.0 28 ARMSSC1 SURFACE . . . . . . . . 67.13 67.6 34 100.0 34 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 59.59 66.7 30 100.0 30 ARMSSC2 RELIABLE SIDE CHAINS . 56.12 69.6 23 100.0 23 ARMSSC2 SECONDARY STRUCTURE . . 56.92 70.8 24 100.0 24 ARMSSC2 SURFACE . . . . . . . . 59.59 66.7 30 100.0 30 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 74.49 50.0 14 100.0 14 ARMSSC3 RELIABLE SIDE CHAINS . 61.26 58.3 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 77.31 46.2 13 100.0 13 ARMSSC3 SURFACE . . . . . . . . 74.49 50.0 14 100.0 14 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 87.34 57.1 7 100.0 7 ARMSSC4 RELIABLE SIDE CHAINS . 87.34 57.1 7 100.0 7 ARMSSC4 SECONDARY STRUCTURE . . 94.33 50.0 6 100.0 6 ARMSSC4 SURFACE . . . . . . . . 87.34 57.1 7 100.0 7 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 2.89 (Number of atoms: 39) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 2.89 39 100.0 39 CRMSCA CRN = ALL/NP . . . . . 0.0740 CRMSCA SECONDARY STRUCTURE . . 2.76 32 100.0 32 CRMSCA SURFACE . . . . . . . . 2.93 37 100.0 37 CRMSCA BURIED . . . . . . . . 1.99 2 100.0 2 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 2.96 194 100.0 194 CRMSMC SECONDARY STRUCTURE . . 2.79 160 100.0 160 CRMSMC SURFACE . . . . . . . . 3.00 184 100.0 184 CRMSMC BURIED . . . . . . . . 2.09 10 100.0 10 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 3.51 157 100.0 157 CRMSSC RELIABLE SIDE CHAINS . 3.42 139 100.0 139 CRMSSC SECONDARY STRUCTURE . . 3.49 130 100.0 130 CRMSSC SURFACE . . . . . . . . 3.52 155 100.0 155 CRMSSC BURIED . . . . . . . . 2.11 2 100.0 2 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 3.25 313 100.0 313 CRMSALL SECONDARY STRUCTURE . . 3.16 258 100.0 258 CRMSALL SURFACE . . . . . . . . 3.28 303 100.0 303 CRMSALL BURIED . . . . . . . . 2.09 10 100.0 10 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.606 1.000 0.500 39 100.0 39 ERRCA SECONDARY STRUCTURE . . 2.574 1.000 0.500 32 100.0 32 ERRCA SURFACE . . . . . . . . 2.639 1.000 0.500 37 100.0 37 ERRCA BURIED . . . . . . . . 1.990 1.000 0.500 2 100.0 2 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.646 1.000 0.500 194 100.0 194 ERRMC SECONDARY STRUCTURE . . 2.592 1.000 0.500 160 100.0 160 ERRMC SURFACE . . . . . . . . 2.678 1.000 0.500 184 100.0 184 ERRMC BURIED . . . . . . . . 2.064 1.000 0.500 10 100.0 10 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.217 1.000 0.500 157 100.0 157 ERRSC RELIABLE SIDE CHAINS . 3.141 1.000 0.500 139 100.0 139 ERRSC SECONDARY STRUCTURE . . 3.206 1.000 0.500 130 100.0 130 ERRSC SURFACE . . . . . . . . 3.231 1.000 0.500 155 100.0 155 ERRSC BURIED . . . . . . . . 2.102 1.000 0.500 2 100.0 2 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.931 1.000 0.500 313 100.0 313 ERRALL SECONDARY STRUCTURE . . 2.899 1.000 0.500 258 100.0 258 ERRALL SURFACE . . . . . . . . 2.960 1.000 0.500 303 100.0 303 ERRALL BURIED . . . . . . . . 2.064 1.000 0.500 10 100.0 10 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 2 18 27 36 39 39 39 DISTCA CA (P) 5.13 46.15 69.23 92.31 100.00 39 DISTCA CA (RMS) 0.87 1.67 1.97 2.56 2.89 DISTCA ALL (N) 9 108 192 283 313 313 313 DISTALL ALL (P) 2.88 34.50 61.34 90.42 100.00 313 DISTALL ALL (RMS) 0.88 1.65 2.08 2.81 3.25 DISTALL END of the results output