####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 39 ( 313), selected 39 , name T0586TS088_1-D2 # Molecule2: number of CA atoms 39 ( 313), selected 39 , name T0586-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0586TS088_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 39 85 - 123 3.74 3.74 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 32 85 - 116 2.00 4.28 LCS_AVERAGE: 76.99 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 27 85 - 111 0.88 4.67 LCS_AVERAGE: 61.34 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 39 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT D 85 D 85 27 32 39 10 23 26 28 28 29 31 31 32 33 35 35 39 39 39 39 39 39 39 39 LCS_GDT Q 86 Q 86 27 32 39 15 23 26 28 28 29 31 31 32 33 35 35 39 39 39 39 39 39 39 39 LCS_GDT L 87 L 87 27 32 39 17 23 26 28 28 29 31 31 32 33 35 36 39 39 39 39 39 39 39 39 LCS_GDT K 88 K 88 27 32 39 17 23 26 28 28 29 31 31 32 33 35 36 39 39 39 39 39 39 39 39 LCS_GDT K 89 K 89 27 32 39 17 23 26 28 28 29 31 31 32 33 35 36 39 39 39 39 39 39 39 39 LCS_GDT E 90 E 90 27 32 39 17 23 26 28 28 29 31 31 32 33 35 36 39 39 39 39 39 39 39 39 LCS_GDT L 91 L 91 27 32 39 17 23 26 28 28 29 31 31 32 33 35 36 39 39 39 39 39 39 39 39 LCS_GDT A 92 A 92 27 32 39 11 23 26 28 28 29 31 31 32 33 35 36 39 39 39 39 39 39 39 39 LCS_GDT D 93 D 93 27 32 39 17 23 26 28 28 29 31 31 32 33 35 36 39 39 39 39 39 39 39 39 LCS_GDT A 94 A 94 27 32 39 17 23 26 28 28 29 31 31 32 33 35 36 39 39 39 39 39 39 39 39 LCS_GDT I 95 I 95 27 32 39 17 23 26 28 28 29 31 31 32 33 35 36 39 39 39 39 39 39 39 39 LCS_GDT T 96 T 96 27 32 39 17 23 26 28 28 29 31 31 32 33 35 36 39 39 39 39 39 39 39 39 LCS_GDT E 97 E 97 27 32 39 17 23 26 28 28 29 31 31 32 33 35 36 39 39 39 39 39 39 39 39 LCS_GDT R 98 R 98 27 32 39 11 23 26 28 28 29 31 31 32 33 35 36 39 39 39 39 39 39 39 39 LCS_GDT F 99 F 99 27 32 39 8 23 26 28 28 29 31 31 32 33 35 36 39 39 39 39 39 39 39 39 LCS_GDT L 100 L 100 27 32 39 17 23 26 28 28 29 31 31 32 33 35 36 39 39 39 39 39 39 39 39 LCS_GDT E 101 E 101 27 32 39 17 23 26 28 28 29 31 31 32 33 35 36 39 39 39 39 39 39 39 39 LCS_GDT E 102 E 102 27 32 39 17 23 26 28 28 29 31 31 32 33 35 36 39 39 39 39 39 39 39 39 LCS_GDT A 103 A 103 27 32 39 17 23 26 28 28 29 31 31 32 33 35 36 39 39 39 39 39 39 39 39 LCS_GDT K 104 K 104 27 32 39 17 23 26 28 28 29 31 31 32 33 35 36 39 39 39 39 39 39 39 39 LCS_GDT S 105 S 105 27 32 39 17 23 26 28 28 29 31 31 32 33 35 36 39 39 39 39 39 39 39 39 LCS_GDT I 106 I 106 27 32 39 17 23 26 28 28 29 31 31 32 33 35 36 39 39 39 39 39 39 39 39 LCS_GDT G 107 G 107 27 32 39 17 23 26 28 28 29 31 31 32 33 35 36 39 39 39 39 39 39 39 39 LCS_GDT L 108 L 108 27 32 39 5 22 26 28 28 29 31 31 32 33 35 36 39 39 39 39 39 39 39 39 LCS_GDT D 109 D 109 27 32 39 12 21 26 28 28 29 31 31 32 33 35 36 39 39 39 39 39 39 39 39 LCS_GDT D 110 D 110 27 32 39 12 15 26 28 28 29 31 31 32 33 35 36 39 39 39 39 39 39 39 39 LCS_GDT Q 111 Q 111 27 32 39 12 15 26 28 28 29 31 31 32 33 35 36 39 39 39 39 39 39 39 39 LCS_GDT T 112 T 112 17 32 39 12 15 17 28 28 29 31 31 32 33 35 36 39 39 39 39 39 39 39 39 LCS_GDT A 113 A 113 17 32 39 12 15 17 17 18 29 31 31 32 33 35 36 39 39 39 39 39 39 39 39 LCS_GDT I 114 I 114 17 32 39 12 15 17 17 18 27 31 31 32 33 35 36 39 39 39 39 39 39 39 39 LCS_GDT E 115 E 115 17 32 39 10 15 17 17 18 21 31 31 32 33 35 36 39 39 39 39 39 39 39 39 LCS_GDT L 116 L 116 17 32 39 10 15 17 17 18 21 22 23 32 33 35 36 39 39 39 39 39 39 39 39 LCS_GDT L 117 L 117 17 21 39 12 15 17 17 18 21 22 23 26 33 35 36 39 39 39 39 39 39 39 39 LCS_GDT I 118 I 118 17 21 39 8 15 17 17 18 21 22 23 28 33 35 36 39 39 39 39 39 39 39 39 LCS_GDT K 119 K 119 17 21 39 12 15 17 17 18 21 22 23 26 33 35 36 39 39 39 39 39 39 39 39 LCS_GDT R 120 R 120 17 21 39 12 15 17 17 18 21 22 23 26 28 31 36 39 39 39 39 39 39 39 39 LCS_GDT S 121 S 121 17 21 39 12 15 17 17 18 21 22 23 26 28 31 36 39 39 39 39 39 39 39 39 LCS_GDT R 122 R 122 17 21 39 12 15 17 17 18 21 22 23 26 28 31 36 39 39 39 39 39 39 39 39 LCS_GDT N 123 N 123 17 21 39 12 15 17 17 18 21 22 23 26 28 31 33 39 39 39 39 39 39 39 39 LCS_AVERAGE LCS_A: 79.44 ( 61.34 76.99 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 17 23 26 28 28 29 31 31 32 33 35 36 39 39 39 39 39 39 39 39 GDT PERCENT_AT 43.59 58.97 66.67 71.79 71.79 74.36 79.49 79.49 82.05 84.62 89.74 92.31 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.34 0.48 0.80 1.02 1.02 1.23 1.67 1.67 2.00 2.29 2.79 3.56 3.74 3.74 3.74 3.74 3.74 3.74 3.74 3.74 GDT RMS_ALL_AT 4.53 4.58 4.60 4.61 4.61 4.59 4.44 4.44 4.28 4.17 3.96 3.75 3.74 3.74 3.74 3.74 3.74 3.74 3.74 3.74 # Checking swapping # possible swapping detected: D 85 D 85 # possible swapping detected: F 99 F 99 # possible swapping detected: E 102 E 102 # possible swapping detected: D 109 D 109 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA D 85 D 85 1.338 0 0.044 0.075 2.413 85.952 76.369 LGA Q 86 Q 86 0.910 0 0.032 1.446 5.974 88.214 64.444 LGA L 87 L 87 0.843 0 0.050 1.407 4.848 90.476 73.631 LGA K 88 K 88 0.480 0 0.050 1.111 6.618 97.619 74.656 LGA K 89 K 89 0.889 0 0.036 0.702 3.495 88.214 73.915 LGA E 90 E 90 1.088 0 0.031 0.136 1.193 83.690 82.434 LGA L 91 L 91 0.889 0 0.035 0.069 0.904 90.476 90.476 LGA A 92 A 92 0.875 0 0.042 0.056 0.883 90.476 90.476 LGA D 93 D 93 1.029 0 0.034 0.102 1.301 85.952 83.690 LGA A 94 A 94 0.889 0 0.028 0.045 1.085 90.476 88.667 LGA I 95 I 95 0.183 0 0.059 0.144 0.893 100.000 98.810 LGA T 96 T 96 0.588 0 0.204 0.279 0.890 90.476 90.476 LGA E 97 E 97 0.839 0 0.062 0.576 1.309 90.476 88.519 LGA R 98 R 98 0.286 0 0.125 0.231 0.835 100.000 97.403 LGA F 99 F 99 1.255 0 0.105 1.403 8.166 83.690 48.225 LGA L 100 L 100 1.520 0 0.144 1.044 2.185 77.143 76.131 LGA E 101 E 101 1.243 0 0.065 1.092 3.302 81.429 76.032 LGA E 102 E 102 0.557 0 0.035 0.910 2.289 90.476 81.905 LGA A 103 A 103 1.194 0 0.030 0.046 1.647 83.690 81.524 LGA K 104 K 104 1.602 0 0.029 0.866 6.175 77.143 60.688 LGA S 105 S 105 0.916 0 0.147 0.757 2.887 88.214 83.413 LGA I 106 I 106 0.727 0 0.161 0.211 1.004 92.857 90.536 LGA G 107 G 107 1.298 0 0.180 0.180 1.298 88.333 88.333 LGA L 108 L 108 0.721 0 0.057 1.414 2.923 88.214 80.833 LGA D 109 D 109 0.821 0 0.089 0.663 2.511 88.214 85.179 LGA D 110 D 110 1.695 0 0.073 0.149 3.417 75.119 66.190 LGA Q 111 Q 111 1.260 0 0.064 1.009 4.142 75.476 69.312 LGA T 112 T 112 2.424 0 0.059 1.014 3.639 59.524 61.973 LGA A 113 A 113 3.446 0 0.037 0.060 4.554 45.476 46.381 LGA I 114 I 114 3.848 0 0.074 0.093 5.244 37.500 47.500 LGA E 115 E 115 5.071 0 0.073 0.373 6.566 25.476 22.381 LGA L 116 L 116 6.570 0 0.076 1.326 9.335 12.976 11.369 LGA L 117 L 117 7.231 0 0.060 0.984 8.477 8.810 12.738 LGA I 118 I 118 7.085 0 0.024 0.638 8.497 8.810 11.667 LGA K 119 K 119 8.606 0 0.081 1.024 9.851 2.976 5.185 LGA R 120 R 120 9.850 0 0.049 1.258 11.045 0.476 3.550 LGA S 121 S 121 10.308 0 0.039 0.528 11.372 0.119 0.952 LGA R 122 R 122 10.940 0 0.206 1.261 13.006 0.000 0.260 LGA N 123 N 123 11.744 0 0.278 1.108 15.210 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 39 156 156 100.00 313 313 100.00 39 SUMMARY(RMSD_GDC): 3.737 3.901 3.918 65.760 61.185 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 39 39 4.0 31 1.67 77.564 78.649 1.748 LGA_LOCAL RMSD: 1.673 Number of atoms: 31 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 4.436 Number of assigned atoms: 39 Std_ASGN_ATOMS RMSD: 3.737 Standard rmsd on all 39 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.929001 * X + -0.240445 * Y + -0.281325 * Z + -58.726524 Y_new = 0.370070 * X + 0.608658 * Y + 0.701843 * Z + -51.167961 Z_new = 0.002476 * X + -0.756122 * Y + 0.654426 * Z + 113.703865 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.379085 -0.002476 -0.857371 [DEG: 21.7200 -0.1419 -49.1237 ] ZXZ: -2.760364 0.857374 3.138318 [DEG: -158.1572 49.1239 179.8124 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0586TS088_1-D2 REMARK 2: T0586-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0586TS088_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 39 39 4.0 31 1.67 78.649 3.74 REMARK ---------------------------------------------------------- MOLECULE T0586TS088_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0586 REMARK MODEL 1 REFINED REMARK PARENT N/A ATOM 668 N ASP 85 2.885 19.804 15.052 1.00 0.00 N ATOM 669 CA ASP 85 2.592 19.134 16.262 1.00 0.00 C ATOM 670 C ASP 85 1.122 18.732 16.408 1.00 0.00 C ATOM 671 O ASP 85 0.918 17.626 16.927 1.00 0.00 O ATOM 672 CB ASP 85 2.913 20.098 17.448 1.00 0.00 C ATOM 673 CG ASP 85 4.430 20.288 17.613 1.00 0.00 C ATOM 674 OD1 ASP 85 5.201 19.497 17.028 1.00 0.00 O ATOM 675 OD2 ASP 85 4.831 21.235 18.323 1.00 0.00 O ATOM 676 N GLN 86 0.115 19.580 16.042 1.00 0.00 N ATOM 677 CA GLN 86 -1.290 19.166 16.114 1.00 0.00 C ATOM 678 C GLN 86 -1.565 18.014 15.080 1.00 0.00 C ATOM 679 O GLN 86 -2.353 17.118 15.437 1.00 0.00 O ATOM 680 CB GLN 86 -2.171 20.382 15.848 1.00 0.00 C ATOM 681 CG GLN 86 -2.135 21.424 16.934 1.00 0.00 C ATOM 682 CD GLN 86 -3.009 22.626 16.628 1.00 0.00 C ATOM 683 OE1 GLN 86 -3.282 22.926 15.466 1.00 0.00 O ATOM 684 NE2 GLN 86 -3.449 23.317 17.673 1.00 0.00 N ATOM 685 N LEU 87 -1.258 18.235 13.765 1.00 0.00 N ATOM 686 CA LEU 87 -1.368 17.196 12.699 1.00 0.00 C ATOM 687 C LEU 87 -0.655 15.891 13.184 1.00 0.00 C ATOM 688 O LEU 87 -1.202 14.827 12.866 1.00 0.00 O ATOM 689 CB LEU 87 -0.811 17.712 11.376 1.00 0.00 C ATOM 690 CG LEU 87 -1.574 18.845 10.718 1.00 0.00 C ATOM 691 CD1 LEU 87 -0.825 19.358 9.500 1.00 0.00 C ATOM 692 CD2 LEU 87 -2.972 18.383 10.325 1.00 0.00 C ATOM 693 N LYS 88 0.617 15.971 13.686 1.00 0.00 N ATOM 694 CA LYS 88 1.329 14.855 14.254 1.00 0.00 C ATOM 695 C LYS 88 0.445 14.138 15.346 1.00 0.00 C ATOM 696 O LYS 88 0.573 12.923 15.430 1.00 0.00 O ATOM 697 CB LYS 88 2.729 15.250 14.767 1.00 0.00 C ATOM 698 CG LYS 88 3.523 14.089 15.312 1.00 0.00 C ATOM 699 CD LYS 88 3.759 13.066 14.214 1.00 0.00 C ATOM 700 CE LYS 88 4.669 13.619 13.130 1.00 0.00 C ATOM 701 NZ LYS 88 5.024 12.584 12.120 1.00 0.00 N ATOM 702 N LYS 89 -0.198 14.844 16.323 1.00 0.00 N ATOM 703 CA LYS 89 -1.105 14.227 17.324 1.00 0.00 C ATOM 704 C LYS 89 -2.269 13.477 16.623 1.00 0.00 C ATOM 705 O LYS 89 -2.592 12.396 17.109 1.00 0.00 O ATOM 706 CB LYS 89 -1.780 15.302 18.130 1.00 0.00 C ATOM 707 CG LYS 89 -0.970 15.971 19.185 1.00 0.00 C ATOM 708 CD LYS 89 -1.994 16.796 19.950 1.00 0.00 C ATOM 709 CE LYS 89 -1.386 17.937 20.794 1.00 0.00 C ATOM 710 NZ LYS 89 -0.703 17.481 22.005 1.00 0.00 N ATOM 711 N GLU 90 -2.941 14.056 15.590 1.00 0.00 N ATOM 712 CA GLU 90 -3.979 13.426 14.781 1.00 0.00 C ATOM 713 C GLU 90 -3.393 12.120 14.154 1.00 0.00 C ATOM 714 O GLU 90 -4.137 11.153 14.046 1.00 0.00 O ATOM 715 CB GLU 90 -4.548 14.425 13.764 1.00 0.00 C ATOM 716 CG GLU 90 -5.331 15.537 14.340 1.00 0.00 C ATOM 717 CD GLU 90 -5.792 16.524 13.287 1.00 0.00 C ATOM 718 OE1 GLU 90 -5.330 16.421 12.131 1.00 0.00 O ATOM 719 OE2 GLU 90 -6.618 17.403 13.617 1.00 0.00 O ATOM 720 N LEU 91 -2.179 12.157 13.564 1.00 0.00 N ATOM 721 CA LEU 91 -1.445 11.036 13.018 1.00 0.00 C ATOM 722 C LEU 91 -1.312 9.915 14.091 1.00 0.00 C ATOM 723 O LEU 91 -1.484 8.761 13.733 1.00 0.00 O ATOM 724 CB LEU 91 -0.110 11.514 12.469 1.00 0.00 C ATOM 725 CG LEU 91 -0.130 12.413 11.260 1.00 0.00 C ATOM 726 CD1 LEU 91 1.263 12.931 10.943 1.00 0.00 C ATOM 727 CD2 LEU 91 -0.708 11.685 10.056 1.00 0.00 C ATOM 728 N ALA 92 -0.721 10.210 15.287 1.00 0.00 N ATOM 729 CA ALA 92 -0.637 9.276 16.396 1.00 0.00 C ATOM 730 C ALA 92 -2.006 8.551 16.600 1.00 0.00 C ATOM 731 O ALA 92 -1.985 7.321 16.682 1.00 0.00 O ATOM 732 CB ALA 92 -0.153 10.035 17.644 1.00 0.00 C ATOM 733 N ASP 93 -3.153 9.232 16.683 1.00 0.00 N ATOM 734 CA ASP 93 -4.470 8.632 16.792 1.00 0.00 C ATOM 735 C ASP 93 -4.799 7.684 15.585 1.00 0.00 C ATOM 736 O ASP 93 -5.440 6.674 15.834 1.00 0.00 O ATOM 737 CB ASP 93 -5.517 9.716 16.940 1.00 0.00 C ATOM 738 CG ASP 93 -5.372 10.518 18.218 1.00 0.00 C ATOM 739 OD1 ASP 93 -4.673 10.034 19.133 1.00 0.00 O ATOM 740 OD2 ASP 93 -5.948 11.623 18.309 1.00 0.00 O ATOM 741 N ALA 94 -4.801 8.166 14.314 1.00 0.00 N ATOM 742 CA ALA 94 -4.998 7.345 13.119 1.00 0.00 C ATOM 743 C ALA 94 -4.018 6.127 13.130 1.00 0.00 C ATOM 744 O ALA 94 -4.476 5.067 12.702 1.00 0.00 O ATOM 745 CB ALA 94 -4.885 8.270 11.895 1.00 0.00 C ATOM 746 N ILE 95 -2.685 6.292 13.398 1.00 0.00 N ATOM 747 CA ILE 95 -1.687 5.216 13.529 1.00 0.00 C ATOM 748 C ILE 95 -2.169 4.200 14.604 1.00 0.00 C ATOM 749 O ILE 95 -2.203 3.019 14.290 1.00 0.00 O ATOM 750 CB ILE 95 -0.270 5.826 13.850 1.00 0.00 C ATOM 751 CG1 ILE 95 0.167 6.732 12.752 1.00 0.00 C ATOM 752 CG2 ILE 95 0.689 4.671 14.117 1.00 0.00 C ATOM 753 CD1 ILE 95 1.344 7.598 13.138 1.00 0.00 C ATOM 754 N THR 96 -2.521 4.665 15.835 1.00 0.00 N ATOM 755 CA THR 96 -3.046 3.873 16.893 1.00 0.00 C ATOM 756 C THR 96 -4.344 3.144 16.359 1.00 0.00 C ATOM 757 O THR 96 -4.235 1.949 16.120 1.00 0.00 O ATOM 758 CB THR 96 -3.208 4.775 18.140 1.00 0.00 C ATOM 759 OG1 THR 96 -4.008 5.949 17.984 1.00 0.00 O ATOM 760 CG2 THR 96 -1.744 5.260 18.599 1.00 0.00 C ATOM 761 N GLU 97 -5.391 3.818 15.806 1.00 0.00 N ATOM 762 CA GLU 97 -6.550 3.094 15.226 1.00 0.00 C ATOM 763 C GLU 97 -6.179 2.024 14.112 1.00 0.00 C ATOM 764 O GLU 97 -6.714 0.926 14.191 1.00 0.00 O ATOM 765 CB GLU 97 -7.553 4.142 14.705 1.00 0.00 C ATOM 766 CG GLU 97 -8.822 3.501 14.129 1.00 0.00 C ATOM 767 CD GLU 97 -9.792 4.542 13.603 1.00 0.00 C ATOM 768 OE1 GLU 97 -9.457 5.743 13.652 1.00 0.00 O ATOM 769 OE2 GLU 97 -10.888 4.157 13.142 1.00 0.00 O ATOM 770 N ARG 98 -5.241 2.286 13.155 1.00 0.00 N ATOM 771 CA ARG 98 -4.814 1.369 12.058 1.00 0.00 C ATOM 772 C ARG 98 -4.284 -0.045 12.535 1.00 0.00 C ATOM 773 O ARG 98 -4.884 -1.038 12.148 1.00 0.00 O ATOM 774 CB ARG 98 -3.878 2.044 11.051 1.00 0.00 C ATOM 775 CG ARG 98 -4.486 3.105 10.170 1.00 0.00 C ATOM 776 CD ARG 98 -3.629 3.388 8.992 1.00 0.00 C ATOM 777 NE ARG 98 -2.472 4.171 9.363 1.00 0.00 N ATOM 778 CZ ARG 98 -2.463 5.492 9.509 1.00 0.00 C ATOM 779 NH1 ARG 98 -1.373 6.100 9.876 1.00 0.00 H ATOM 780 NH2 ARG 98 -3.569 6.232 9.305 1.00 0.00 H ATOM 781 N PHE 99 -3.226 -0.117 13.338 1.00 0.00 N ATOM 782 CA PHE 99 -2.626 -1.347 13.868 1.00 0.00 C ATOM 783 C PHE 99 -3.578 -1.993 14.903 1.00 0.00 C ATOM 784 O PHE 99 -3.523 -3.211 14.993 1.00 0.00 O ATOM 785 CB PHE 99 -1.206 -1.136 14.324 1.00 0.00 C ATOM 786 CG PHE 99 -0.310 -0.506 13.347 1.00 0.00 C ATOM 787 CD1 PHE 99 -0.288 0.884 13.197 1.00 0.00 C ATOM 788 CD2 PHE 99 0.456 -1.305 12.515 1.00 0.00 C ATOM 789 CE1 PHE 99 0.523 1.476 12.231 1.00 0.00 C ATOM 790 CE2 PHE 99 1.287 -0.746 11.558 1.00 0.00 C ATOM 791 CZ PHE 99 1.307 0.638 11.410 1.00 0.00 C ATOM 792 N LEU 100 -4.111 -1.244 15.886 1.00 0.00 N ATOM 793 CA LEU 100 -5.120 -1.792 16.817 1.00 0.00 C ATOM 794 C LEU 100 -6.217 -2.578 16.009 1.00 0.00 C ATOM 795 O LEU 100 -6.335 -3.765 16.252 1.00 0.00 O ATOM 796 CB LEU 100 -5.767 -0.680 17.646 1.00 0.00 C ATOM 797 CG LEU 100 -6.670 -1.113 18.785 1.00 0.00 C ATOM 798 CD1 LEU 100 -6.917 0.040 19.744 1.00 0.00 C ATOM 799 CD2 LEU 100 -7.990 -1.648 18.250 1.00 0.00 C ATOM 800 N GLU 101 -6.853 -2.003 14.949 1.00 0.00 N ATOM 801 CA GLU 101 -7.865 -2.647 14.088 1.00 0.00 C ATOM 802 C GLU 101 -7.271 -3.927 13.376 1.00 0.00 C ATOM 803 O GLU 101 -8.072 -4.832 13.146 1.00 0.00 O ATOM 804 CB GLU 101 -8.414 -1.614 13.101 1.00 0.00 C ATOM 805 CG GLU 101 -9.528 -2.175 12.211 1.00 0.00 C ATOM 806 CD GLU 101 -10.063 -1.133 11.249 1.00 0.00 C ATOM 807 OE1 GLU 101 -9.545 0.002 11.255 1.00 0.00 O ATOM 808 OE2 GLU 101 -11.002 -1.452 10.489 1.00 0.00 O ATOM 809 N GLU 102 -6.206 -3.811 12.600 1.00 0.00 N ATOM 810 CA GLU 102 -5.486 -4.907 11.944 1.00 0.00 C ATOM 811 C GLU 102 -5.189 -6.054 12.972 1.00 0.00 C ATOM 812 O GLU 102 -5.224 -7.201 12.528 1.00 0.00 O ATOM 813 CB GLU 102 -4.211 -4.323 11.352 1.00 0.00 C ATOM 814 CG GLU 102 -4.417 -3.358 10.212 1.00 0.00 C ATOM 815 CD GLU 102 -3.128 -2.735 9.719 1.00 0.00 C ATOM 816 OE1 GLU 102 -2.085 -2.925 10.378 1.00 0.00 O ATOM 817 OE2 GLU 102 -3.159 -2.053 8.672 1.00 0.00 O ATOM 818 N ALA 103 -4.600 -5.759 14.148 1.00 0.00 N ATOM 819 CA ALA 103 -4.377 -6.720 15.197 1.00 0.00 C ATOM 820 C ALA 103 -5.750 -7.412 15.502 1.00 0.00 C ATOM 821 O ALA 103 -5.774 -8.629 15.633 1.00 0.00 O ATOM 822 CB ALA 103 -3.731 -6.020 16.396 1.00 0.00 C ATOM 823 N LYS 104 -6.830 -6.680 15.840 1.00 0.00 N ATOM 824 CA LYS 104 -8.169 -7.264 16.033 1.00 0.00 C ATOM 825 C LYS 104 -8.540 -8.155 14.789 1.00 0.00 C ATOM 826 O LYS 104 -9.100 -9.233 15.010 1.00 0.00 O ATOM 827 CB LYS 104 -9.206 -6.137 16.114 1.00 0.00 C ATOM 828 CG LYS 104 -10.633 -6.623 16.315 1.00 0.00 C ATOM 829 CD LYS 104 -10.854 -7.188 17.709 1.00 0.00 C ATOM 830 CE LYS 104 -10.778 -6.099 18.765 1.00 0.00 C ATOM 831 NZ LYS 104 -11.129 -6.610 20.119 1.00 0.00 N ATOM 832 N SER 105 -8.472 -7.625 13.539 1.00 0.00 N ATOM 833 CA SER 105 -8.697 -8.378 12.268 1.00 0.00 C ATOM 834 C SER 105 -7.890 -9.737 12.249 1.00 0.00 C ATOM 835 O SER 105 -8.458 -10.788 11.929 1.00 0.00 O ATOM 836 CB SER 105 -8.355 -7.456 11.093 1.00 0.00 C ATOM 837 OG SER 105 -9.242 -6.295 10.890 1.00 0.00 O ATOM 838 N ILE 106 -6.589 -9.687 12.669 1.00 0.00 N ATOM 839 CA ILE 106 -5.669 -10.850 12.807 1.00 0.00 C ATOM 840 C ILE 106 -5.959 -11.784 14.054 1.00 0.00 C ATOM 841 O ILE 106 -5.460 -12.915 14.018 1.00 0.00 O ATOM 842 CB ILE 106 -4.155 -10.451 12.813 1.00 0.00 C ATOM 843 CG1 ILE 106 -3.889 -9.647 14.102 1.00 0.00 C ATOM 844 CG2 ILE 106 -3.841 -9.654 11.574 1.00 0.00 C ATOM 845 CD1 ILE 106 -2.420 -9.342 14.294 1.00 0.00 C ATOM 846 N GLY 107 -6.964 -11.495 14.889 1.00 0.00 N ATOM 847 CA GLY 107 -7.398 -12.275 15.994 1.00 0.00 C ATOM 848 C GLY 107 -7.096 -11.659 17.401 1.00 0.00 C ATOM 849 O GLY 107 -7.679 -12.170 18.354 1.00 0.00 O ATOM 850 N LEU 108 -6.428 -10.489 17.534 1.00 0.00 N ATOM 851 CA LEU 108 -6.068 -9.881 18.804 1.00 0.00 C ATOM 852 C LEU 108 -7.237 -9.051 19.436 1.00 0.00 C ATOM 853 O LEU 108 -7.808 -8.159 18.810 1.00 0.00 O ATOM 854 CB LEU 108 -4.818 -9.049 18.515 1.00 0.00 C ATOM 855 CG LEU 108 -3.564 -9.720 18.100 1.00 0.00 C ATOM 856 CD1 LEU 108 -2.455 -8.714 17.824 1.00 0.00 C ATOM 857 CD2 LEU 108 -3.107 -10.741 19.132 1.00 0.00 C ATOM 858 N ASP 109 -7.408 -9.213 20.759 1.00 0.00 N ATOM 859 CA ASP 109 -8.412 -8.482 21.524 1.00 0.00 C ATOM 860 C ASP 109 -7.921 -7.017 21.739 1.00 0.00 C ATOM 861 O ASP 109 -6.882 -6.590 21.225 1.00 0.00 O ATOM 862 CB ASP 109 -8.701 -9.247 22.840 1.00 0.00 C ATOM 863 CG ASP 109 -7.532 -9.124 23.808 1.00 0.00 C ATOM 864 OD1 ASP 109 -6.494 -8.541 23.437 1.00 0.00 O ATOM 865 OD2 ASP 109 -7.661 -9.636 24.942 1.00 0.00 O ATOM 866 N ASP 110 -8.827 -6.185 22.171 1.00 0.00 N ATOM 867 CA ASP 110 -8.595 -4.729 22.454 1.00 0.00 C ATOM 868 C ASP 110 -7.196 -4.440 23.136 1.00 0.00 C ATOM 869 O ASP 110 -6.677 -3.365 22.849 1.00 0.00 O ATOM 870 CB ASP 110 -9.781 -4.168 23.304 1.00 0.00 C ATOM 871 CG ASP 110 -11.019 -4.003 22.521 1.00 0.00 C ATOM 872 OD1 ASP 110 -10.979 -4.121 21.279 1.00 0.00 O ATOM 873 OD2 ASP 110 -12.069 -3.757 23.150 1.00 0.00 O ATOM 874 N GLN 111 -6.797 -5.133 24.240 1.00 0.00 N ATOM 875 CA GLN 111 -5.490 -4.984 24.848 1.00 0.00 C ATOM 876 C GLN 111 -4.338 -5.316 23.849 1.00 0.00 C ATOM 877 O GLN 111 -3.510 -4.413 23.667 1.00 0.00 O ATOM 878 CB GLN 111 -5.425 -5.826 26.109 1.00 0.00 C ATOM 879 CG GLN 111 -6.252 -5.345 27.258 1.00 0.00 C ATOM 880 CD GLN 111 -6.142 -6.229 28.485 1.00 0.00 C ATOM 881 OE1 GLN 111 -5.834 -7.417 28.381 1.00 0.00 O ATOM 882 NE2 GLN 111 -6.392 -5.652 29.654 1.00 0.00 N ATOM 883 N THR 112 -4.250 -6.515 23.259 1.00 0.00 N ATOM 884 CA THR 112 -3.245 -6.856 22.249 1.00 0.00 C ATOM 885 C THR 112 -3.237 -5.851 21.038 1.00 0.00 C ATOM 886 O THR 112 -2.133 -5.606 20.551 1.00 0.00 O ATOM 887 CB THR 112 -3.404 -8.402 21.975 1.00 0.00 C ATOM 888 OG1 THR 112 -4.716 -8.794 21.556 1.00 0.00 O ATOM 889 CG2 THR 112 -3.028 -9.217 23.272 1.00 0.00 C ATOM 890 N ALA 113 -4.382 -5.530 20.405 1.00 0.00 N ATOM 891 CA ALA 113 -4.482 -4.538 19.347 1.00 0.00 C ATOM 892 C ALA 113 -3.792 -3.217 19.838 1.00 0.00 C ATOM 893 O ALA 113 -3.010 -2.704 19.041 1.00 0.00 O ATOM 894 CB ALA 113 -5.970 -4.398 19.018 1.00 0.00 C ATOM 895 N ILE 114 -4.234 -2.575 20.955 1.00 0.00 N ATOM 896 CA ILE 114 -3.519 -1.401 21.475 1.00 0.00 C ATOM 897 C ILE 114 -1.970 -1.617 21.449 1.00 0.00 C ATOM 898 O ILE 114 -1.332 -0.812 20.865 1.00 0.00 O ATOM 899 CB ILE 114 -3.987 -1.012 22.894 1.00 0.00 C ATOM 900 CG1 ILE 114 -5.439 -0.620 22.881 1.00 0.00 C ATOM 901 CG2 ILE 114 -3.075 0.080 23.444 1.00 0.00 C ATOM 902 CD1 ILE 114 -6.062 -0.575 24.259 1.00 0.00 C ATOM 903 N GLU 115 -1.431 -2.792 21.858 1.00 0.00 N ATOM 904 CA GLU 115 0.001 -3.114 21.815 1.00 0.00 C ATOM 905 C GLU 115 0.607 -3.041 20.360 1.00 0.00 C ATOM 906 O GLU 115 1.785 -2.747 20.277 1.00 0.00 O ATOM 907 CB GLU 115 0.242 -4.488 22.452 1.00 0.00 C ATOM 908 CG GLU 115 1.708 -4.908 22.505 1.00 0.00 C ATOM 909 CD GLU 115 1.896 -6.280 23.119 1.00 0.00 C ATOM 910 OE1 GLU 115 0.881 -6.917 23.475 1.00 0.00 O ATOM 911 OE2 GLU 115 3.059 -6.720 23.247 1.00 0.00 O ATOM 912 N LEU 116 -0.014 -3.708 19.340 1.00 0.00 N ATOM 913 CA LEU 116 0.421 -3.642 17.917 1.00 0.00 C ATOM 914 C LEU 116 0.433 -2.122 17.546 1.00 0.00 C ATOM 915 O LEU 116 1.463 -1.710 17.029 1.00 0.00 O ATOM 916 CB LEU 116 -0.385 -4.572 16.966 1.00 0.00 C ATOM 917 CG LEU 116 -0.026 -4.452 15.515 1.00 0.00 C ATOM 918 CD1 LEU 116 1.397 -4.940 15.293 1.00 0.00 C ATOM 919 CD2 LEU 116 -1.004 -5.276 14.693 1.00 0.00 C ATOM 920 N LEU 117 -0.711 -1.453 17.548 1.00 0.00 N ATOM 921 CA LEU 117 -0.845 -0.043 17.426 1.00 0.00 C ATOM 922 C LEU 117 0.306 0.757 18.147 1.00 0.00 C ATOM 923 O LEU 117 0.738 1.771 17.601 1.00 0.00 O ATOM 924 CB LEU 117 -2.105 0.221 18.334 1.00 0.00 C ATOM 925 CG LEU 117 -2.712 1.621 18.337 1.00 0.00 C ATOM 926 CD1 LEU 117 -4.106 1.706 18.937 1.00 0.00 C ATOM 927 CD2 LEU 117 -1.731 2.489 19.233 1.00 0.00 C ATOM 928 N ILE 118 0.517 0.479 19.466 1.00 0.00 N ATOM 929 CA ILE 118 1.580 1.051 20.325 1.00 0.00 C ATOM 930 C ILE 118 2.965 0.735 19.723 1.00 0.00 C ATOM 931 O ILE 118 3.777 1.663 19.672 1.00 0.00 O ATOM 932 CB ILE 118 1.451 0.671 21.798 1.00 0.00 C ATOM 933 CG1 ILE 118 0.052 1.018 22.330 1.00 0.00 C ATOM 934 CG2 ILE 118 2.553 1.219 22.619 1.00 0.00 C ATOM 935 CD1 ILE 118 -0.229 2.539 22.494 1.00 0.00 C ATOM 936 N LYS 119 3.331 -0.532 19.473 1.00 0.00 N ATOM 937 CA LYS 119 4.593 -0.955 18.866 1.00 0.00 C ATOM 938 C LYS 119 4.860 -0.236 17.507 1.00 0.00 C ATOM 939 O LYS 119 6.045 -0.037 17.224 1.00 0.00 O ATOM 940 CB LYS 119 4.619 -2.468 18.703 1.00 0.00 C ATOM 941 CG LYS 119 4.792 -3.243 19.980 1.00 0.00 C ATOM 942 CD LYS 119 4.882 -4.737 19.721 1.00 0.00 C ATOM 943 CE LYS 119 5.036 -5.513 21.017 1.00 0.00 C ATOM 944 NZ LYS 119 5.081 -6.983 20.784 1.00 0.00 N ATOM 945 N ARG 120 3.903 -0.216 16.560 1.00 0.00 N ATOM 946 CA ARG 120 3.977 0.484 15.280 1.00 0.00 C ATOM 947 C ARG 120 4.054 2.027 15.476 1.00 0.00 C ATOM 948 O ARG 120 4.930 2.592 14.846 1.00 0.00 O ATOM 949 CB ARG 120 2.865 0.001 14.340 1.00 0.00 C ATOM 950 CG ARG 120 2.852 -1.492 14.019 1.00 0.00 C ATOM 951 CD ARG 120 3.943 -1.791 13.127 1.00 0.00 C ATOM 952 NE ARG 120 4.202 -3.173 12.688 1.00 0.00 N ATOM 953 CZ ARG 120 3.828 -3.614 11.496 1.00 0.00 C ATOM 954 NH1 ARG 120 4.120 -4.858 11.077 1.00 0.00 H ATOM 955 NH2 ARG 120 3.081 -2.823 10.698 1.00 0.00 H ATOM 956 N SER 121 3.207 2.672 16.291 1.00 0.00 N ATOM 957 CA SER 121 3.356 4.085 16.545 1.00 0.00 C ATOM 958 C SER 121 4.847 4.389 17.003 1.00 0.00 C ATOM 959 O SER 121 5.349 5.423 16.566 1.00 0.00 O ATOM 960 CB SER 121 2.328 4.551 17.600 1.00 0.00 C ATOM 961 OG SER 121 2.652 4.284 18.971 1.00 0.00 O ATOM 962 N ARG 122 5.452 3.643 17.955 1.00 0.00 N ATOM 963 CA ARG 122 6.840 3.760 18.397 1.00 0.00 C ATOM 964 C ARG 122 7.852 3.395 17.247 1.00 0.00 C ATOM 965 O ARG 122 8.853 4.119 17.144 1.00 0.00 O ATOM 966 CB ARG 122 7.154 2.952 19.623 1.00 0.00 C ATOM 967 CG ARG 122 6.570 3.402 20.923 1.00 0.00 C ATOM 968 CD ARG 122 7.341 2.906 22.147 1.00 0.00 C ATOM 969 NE ARG 122 8.646 3.627 22.152 1.00 0.00 N ATOM 970 CZ ARG 122 9.650 3.247 22.993 1.00 0.00 C ATOM 971 NH1 ARG 122 9.476 2.202 23.849 1.00 0.00 H ATOM 972 NH2 ARG 122 10.839 3.921 22.973 1.00 0.00 H ATOM 973 N ASN 123 7.778 2.206 16.583 1.00 0.00 N ATOM 974 CA ASN 123 8.607 1.852 15.460 1.00 0.00 C ATOM 975 C ASN 123 8.560 2.944 14.347 1.00 0.00 C ATOM 976 O ASN 123 9.647 3.255 13.863 1.00 0.00 O ATOM 977 CB ASN 123 8.226 0.441 14.925 1.00 0.00 C ATOM 978 CG ASN 123 9.412 -0.132 14.082 1.00 0.00 C ATOM 979 OD1 ASN 123 10.040 0.613 13.301 1.00 0.00 O ATOM 980 ND2 ASN 123 9.348 -1.420 13.858 1.00 0.00 N TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 313 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 20.48 94.7 76 100.0 76 ARMSMC SECONDARY STRUCTURE . . 12.94 100.0 64 100.0 64 ARMSMC SURFACE . . . . . . . . 20.91 94.4 72 100.0 72 ARMSMC BURIED . . . . . . . . 10.12 100.0 4 100.0 4 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 74.10 55.9 34 100.0 34 ARMSSC1 RELIABLE SIDE CHAINS . 74.10 55.9 34 100.0 34 ARMSSC1 SECONDARY STRUCTURE . . 76.11 53.6 28 100.0 28 ARMSSC1 SURFACE . . . . . . . . 74.10 55.9 34 100.0 34 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 69.08 60.0 30 100.0 30 ARMSSC2 RELIABLE SIDE CHAINS . 64.08 65.2 23 100.0 23 ARMSSC2 SECONDARY STRUCTURE . . 71.29 58.3 24 100.0 24 ARMSSC2 SURFACE . . . . . . . . 69.08 60.0 30 100.0 30 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 78.94 28.6 14 100.0 14 ARMSSC3 RELIABLE SIDE CHAINS . 72.08 33.3 12 100.0 12 ARMSSC3 SECONDARY STRUCTURE . . 76.09 30.8 13 100.0 13 ARMSSC3 SURFACE . . . . . . . . 78.94 28.6 14 100.0 14 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 57.54 71.4 7 100.0 7 ARMSSC4 RELIABLE SIDE CHAINS . 57.54 71.4 7 100.0 7 ARMSSC4 SECONDARY STRUCTURE . . 61.97 66.7 6 100.0 6 ARMSSC4 SURFACE . . . . . . . . 57.54 71.4 7 100.0 7 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 3.74 (Number of atoms: 39) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 3.74 39 100.0 39 CRMSCA CRN = ALL/NP . . . . . 0.0958 CRMSCA SECONDARY STRUCTURE . . 3.51 32 100.0 32 CRMSCA SURFACE . . . . . . . . 3.79 37 100.0 37 CRMSCA BURIED . . . . . . . . 2.70 2 100.0 2 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 3.87 194 100.0 194 CRMSMC SECONDARY STRUCTURE . . 3.56 160 100.0 160 CRMSMC SURFACE . . . . . . . . 3.92 184 100.0 184 CRMSMC BURIED . . . . . . . . 2.78 10 100.0 10 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 3.96 157 100.0 157 CRMSSC RELIABLE SIDE CHAINS . 3.87 139 100.0 139 CRMSSC SECONDARY STRUCTURE . . 3.79 130 100.0 130 CRMSSC SURFACE . . . . . . . . 3.97 155 100.0 155 CRMSSC BURIED . . . . . . . . 2.87 2 100.0 2 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 3.94 313 100.0 313 CRMSALL SECONDARY STRUCTURE . . 3.70 258 100.0 258 CRMSALL SURFACE . . . . . . . . 3.97 303 100.0 303 CRMSALL BURIED . . . . . . . . 2.78 10 100.0 10 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.338 1.000 0.500 39 100.0 39 ERRCA SECONDARY STRUCTURE . . 3.224 1.000 0.500 32 100.0 32 ERRCA SURFACE . . . . . . . . 3.373 1.000 0.500 37 100.0 37 ERRCA BURIED . . . . . . . . 2.698 1.000 0.500 2 100.0 2 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.398 1.000 0.500 194 100.0 194 ERRMC SECONDARY STRUCTURE . . 3.258 1.000 0.500 160 100.0 160 ERRMC SURFACE . . . . . . . . 3.433 1.000 0.500 184 100.0 184 ERRMC BURIED . . . . . . . . 2.758 1.000 0.500 10 100.0 10 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.622 1.000 0.500 157 100.0 157 ERRSC RELIABLE SIDE CHAINS . 3.561 1.000 0.500 139 100.0 139 ERRSC SECONDARY STRUCTURE . . 3.505 1.000 0.500 130 100.0 130 ERRSC SURFACE . . . . . . . . 3.632 1.000 0.500 155 100.0 155 ERRSC BURIED . . . . . . . . 2.867 1.000 0.500 2 100.0 2 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.522 1.000 0.500 313 100.0 313 ERRALL SECONDARY STRUCTURE . . 3.396 1.000 0.500 258 100.0 258 ERRALL SURFACE . . . . . . . . 3.547 1.000 0.500 303 100.0 303 ERRALL BURIED . . . . . . . . 2.758 1.000 0.500 10 100.0 10 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 4 25 32 39 39 39 DISTCA CA (P) 0.00 10.26 64.10 82.05 100.00 39 DISTCA CA (RMS) 0.00 1.52 2.44 2.70 3.74 DISTCA ALL (N) 6 32 168 254 311 313 313 DISTALL ALL (P) 1.92 10.22 53.67 81.15 99.36 313 DISTALL ALL (RMS) 0.89 1.49 2.39 2.93 3.85 DISTALL END of the results output