####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 73 ( 292), selected 73 , name T0586AL396_1-D1 # Molecule2: number of CA atoms 80 ( 640), selected 73 , name T0586-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0586AL396_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 73 12 - 84 1.94 1.94 LCS_AVERAGE: 91.25 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 73 12 - 84 1.94 1.94 LCS_AVERAGE: 91.25 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 64 12 - 75 0.99 2.08 LCS_AVERAGE: 70.84 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 73 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT K 12 K 12 64 73 73 20 47 60 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT P 13 P 13 64 73 73 28 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT I 14 I 14 64 73 73 32 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT Y 15 Y 15 64 73 73 32 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT S 16 S 16 64 73 73 32 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT Q 17 Q 17 64 73 73 32 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT I 18 I 18 64 73 73 32 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT S 19 S 19 64 73 73 32 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT D 20 D 20 64 73 73 30 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT W 21 W 21 64 73 73 32 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT M 22 M 22 64 73 73 32 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT K 23 K 23 64 73 73 32 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT K 24 K 24 64 73 73 32 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT Q 25 Q 25 64 73 73 32 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT M 26 M 26 64 73 73 32 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT I 27 I 27 64 73 73 32 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT T 28 T 28 64 73 73 32 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT G 29 G 29 64 73 73 32 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT E 30 E 30 64 73 73 32 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT W 31 W 31 64 73 73 32 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT K 32 K 32 64 73 73 32 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT G 33 G 33 64 73 73 32 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT E 34 E 34 64 73 73 32 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT D 35 D 35 64 73 73 32 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT K 36 K 36 64 73 73 20 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT L 37 L 37 64 73 73 11 46 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT P 38 P 38 64 73 73 9 30 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT S 39 S 39 64 73 73 7 25 60 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT V 40 V 40 64 73 73 20 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT R 41 R 41 64 73 73 28 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT E 42 E 42 64 73 73 7 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT M 43 M 43 64 73 73 7 44 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT G 44 G 44 64 73 73 21 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT V 45 V 45 64 73 73 30 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT K 46 K 46 64 73 73 13 47 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT L 47 L 47 64 73 73 13 35 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT A 48 A 48 64 73 73 18 36 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT V 49 V 49 64 73 73 15 35 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT N 50 N 50 64 73 73 15 38 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT P 51 P 51 64 73 73 21 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT N 52 N 52 64 73 73 30 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT T 53 T 53 64 73 73 30 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT V 54 V 54 64 73 73 32 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT S 55 S 55 64 73 73 32 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT R 56 R 56 64 73 73 32 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT A 57 A 57 64 73 73 32 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT Y 58 Y 58 64 73 73 32 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT Q 59 Q 59 64 73 73 32 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT E 60 E 60 64 73 73 32 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT L 61 L 61 64 73 73 32 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT E 62 E 62 64 73 73 32 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT R 63 R 63 64 73 73 32 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT A 64 A 64 64 73 73 32 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT G 65 G 65 64 73 73 32 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT Y 66 Y 66 64 73 73 13 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT I 67 I 67 64 73 73 13 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT Y 68 Y 68 64 73 73 13 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT A 69 A 69 64 73 73 9 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT K 70 K 70 64 73 73 6 33 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT R 71 R 71 64 73 73 10 29 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT G 72 G 72 64 73 73 13 33 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT M 73 M 73 64 73 73 3 31 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT G 74 G 74 64 73 73 10 37 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT S 75 S 75 64 73 73 3 4 4 9 48 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT F 76 F 76 4 73 73 3 4 18 22 48 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT V 77 V 77 4 73 73 3 4 4 18 26 45 60 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT T 78 T 78 4 73 73 3 4 4 14 58 64 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT S 79 S 79 4 73 73 0 3 4 6 26 29 46 68 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT D 80 D 80 5 73 73 5 5 5 6 11 12 67 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT K 81 K 81 5 73 73 5 5 13 43 58 65 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT A 82 A 82 5 73 73 5 5 5 5 5 13 46 64 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT L 83 L 83 5 73 73 5 5 5 11 22 34 44 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_GDT F 84 F 84 5 73 73 5 5 5 35 54 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 LCS_AVERAGE LCS_A: 84.45 ( 70.84 91.25 91.25 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 32 48 61 63 63 66 68 69 72 73 73 73 73 73 73 73 73 73 73 73 GDT PERCENT_AT 40.00 60.00 76.25 78.75 78.75 82.50 85.00 86.25 90.00 91.25 91.25 91.25 91.25 91.25 91.25 91.25 91.25 91.25 91.25 91.25 GDT RMS_LOCAL 0.35 0.55 0.85 0.88 0.88 1.21 1.38 1.51 1.81 1.94 1.94 1.94 1.94 1.94 1.94 1.94 1.94 1.94 1.94 1.94 GDT RMS_ALL_AT 2.08 2.08 2.09 2.09 2.09 2.02 1.99 1.97 1.95 1.94 1.94 1.94 1.94 1.94 1.94 1.94 1.94 1.94 1.94 1.94 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA K 12 K 12 1.598 5 0.057 0.057 1.598 77.143 34.286 LGA P 13 P 13 1.051 3 0.024 0.024 1.256 85.952 49.116 LGA I 14 I 14 0.702 4 0.032 0.032 0.780 90.476 45.238 LGA Y 15 Y 15 0.444 8 0.069 0.069 0.786 92.857 30.952 LGA S 16 S 16 0.878 2 0.033 0.033 0.944 90.476 60.317 LGA Q 17 Q 17 0.913 5 0.032 0.032 0.978 90.476 40.212 LGA I 18 I 18 0.729 4 0.083 0.083 0.749 90.476 45.238 LGA S 19 S 19 0.793 2 0.020 0.020 1.071 88.214 58.810 LGA D 20 D 20 1.116 4 0.051 0.051 1.116 81.429 40.714 LGA W 21 W 21 1.028 10 0.042 0.042 1.111 81.429 23.265 LGA M 22 M 22 0.897 4 0.038 0.038 0.921 90.476 45.238 LGA K 23 K 23 0.755 5 0.019 0.019 0.818 90.476 40.212 LGA K 24 K 24 0.825 5 0.039 0.039 0.825 90.476 40.212 LGA Q 25 Q 25 0.977 5 0.036 0.036 0.977 90.476 40.212 LGA M 26 M 26 0.822 4 0.057 0.057 0.841 90.476 45.238 LGA I 27 I 27 0.376 4 0.083 0.083 0.722 92.857 46.429 LGA T 28 T 28 0.883 3 0.084 0.084 0.883 90.476 51.701 LGA G 29 G 29 0.881 0 0.128 0.128 1.207 88.214 88.214 LGA E 30 E 30 0.938 5 0.032 0.032 0.938 90.476 40.212 LGA W 31 W 31 0.736 10 0.012 0.012 0.930 90.476 25.850 LGA K 32 K 32 1.140 5 0.053 0.053 1.140 88.214 39.206 LGA G 33 G 33 0.797 0 0.019 0.019 1.225 85.952 85.952 LGA E 34 E 34 1.050 5 0.115 0.115 1.146 83.690 37.196 LGA D 35 D 35 1.129 4 0.096 0.096 1.129 85.952 42.976 LGA K 36 K 36 0.182 5 0.036 0.036 0.949 95.238 42.328 LGA L 37 L 37 0.926 4 0.064 0.064 1.293 88.333 44.167 LGA P 38 P 38 1.348 3 0.073 0.073 1.698 77.143 44.082 LGA S 39 S 39 1.549 2 0.062 0.062 1.549 79.286 52.857 LGA V 40 V 40 0.687 3 0.040 0.040 0.918 90.476 51.701 LGA R 41 R 41 0.670 7 0.032 0.032 0.670 92.857 33.766 LGA E 42 E 42 0.910 5 0.048 0.048 0.910 90.476 40.212 LGA M 43 M 43 1.180 4 0.052 0.052 1.213 83.690 41.845 LGA G 44 G 44 0.967 0 0.087 0.087 1.802 83.810 83.810 LGA V 45 V 45 0.908 3 0.080 0.080 1.363 88.214 50.408 LGA K 46 K 46 1.151 5 0.218 0.218 2.695 75.476 33.545 LGA L 47 L 47 1.196 4 0.768 0.768 3.700 72.024 36.012 LGA A 48 A 48 1.418 1 0.123 0.123 1.784 77.143 61.714 LGA V 49 V 49 1.351 3 0.067 0.067 1.415 81.429 46.531 LGA N 50 N 50 1.256 4 0.021 0.021 1.299 81.429 40.714 LGA P 51 P 51 0.942 3 0.021 0.021 0.985 90.476 51.701 LGA N 52 N 52 0.655 4 0.033 0.033 0.704 90.476 45.238 LGA T 53 T 53 0.500 3 0.025 0.025 0.510 95.238 54.422 LGA V 54 V 54 0.211 3 0.026 0.026 0.319 100.000 57.143 LGA S 55 S 55 0.119 2 0.062 0.062 0.223 100.000 66.667 LGA R 56 R 56 0.239 7 0.049 0.049 0.426 100.000 36.364 LGA A 57 A 57 0.342 1 0.090 0.090 0.342 100.000 80.000 LGA Y 58 Y 58 0.269 8 0.019 0.019 0.290 100.000 33.333 LGA Q 59 Q 59 0.277 5 0.027 0.027 0.277 100.000 44.444 LGA E 60 E 60 0.139 5 0.051 0.051 0.392 100.000 44.444 LGA L 61 L 61 0.276 4 0.011 0.011 0.444 100.000 50.000 LGA E 62 E 62 0.497 5 0.037 0.037 0.497 100.000 44.444 LGA R 63 R 63 0.198 7 0.087 0.087 0.438 100.000 36.364 LGA A 64 A 64 0.332 1 0.024 0.024 0.332 100.000 80.000 LGA G 65 G 65 0.621 0 0.078 0.078 0.625 92.857 92.857 LGA Y 66 Y 66 0.814 8 0.059 0.059 1.004 88.214 29.405 LGA I 67 I 67 0.818 4 0.024 0.024 0.878 90.476 45.238 LGA Y 68 Y 68 0.979 8 0.029 0.029 0.979 90.476 30.159 LGA A 69 A 69 1.173 1 0.044 0.044 1.662 79.286 63.429 LGA K 70 K 70 1.704 5 0.095 0.095 1.852 75.000 33.333 LGA R 71 R 71 1.936 7 0.028 0.028 1.936 72.857 26.494 LGA G 72 G 72 1.849 0 0.182 0.182 2.454 68.810 68.810 LGA M 73 M 73 1.984 4 0.232 0.232 2.832 68.929 34.464 LGA G 74 G 74 1.205 0 0.023 0.023 1.301 81.429 81.429 LGA S 75 S 75 3.467 2 0.022 0.022 4.498 46.786 31.190 LGA F 76 F 76 3.513 7 0.074 0.074 3.513 50.119 18.225 LGA V 77 V 77 4.471 3 0.093 0.093 4.471 45.119 25.782 LGA T 78 T 78 3.381 3 0.661 0.661 3.934 46.667 26.667 LGA S 79 S 79 5.888 2 0.598 0.598 7.914 20.357 13.571 LGA D 80 D 80 5.099 4 0.556 0.556 5.099 35.952 17.976 LGA K 81 K 81 4.427 5 0.079 0.079 4.895 34.286 15.238 LGA A 82 A 82 6.567 1 0.024 0.024 6.567 19.405 15.524 LGA L 83 L 83 5.484 4 0.057 0.057 5.503 30.476 15.238 LGA F 84 F 84 3.801 7 0.072 0.072 4.300 40.238 14.632 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 73 292 292 100.00 584 292 50.00 80 SUMMARY(RMSD_GDC): 1.942 1.897 1.897 74.107 40.311 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 73 80 4.0 69 1.51 79.062 84.748 4.296 LGA_LOCAL RMSD: 1.506 Number of atoms: 69 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 1.974 Number of assigned atoms: 73 Std_ASGN_ATOMS RMSD: 1.942 Standard rmsd on all 73 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.014580 * X + 0.024378 * Y + 0.999596 * Z + -46.899727 Y_new = -0.238472 * X + -0.970939 * Y + 0.020201 * Z + 60.800999 Z_new = 0.971040 * X + -0.238081 * Y + 0.019970 * Z + -10.413284 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.631861 -1.329546 -1.487113 [DEG: -93.4988 -76.1774 -85.2053 ] ZXZ: 1.591003 1.550825 1.811234 [DEG: 91.1577 88.8557 103.7761 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0586AL396_1-D1 REMARK 2: T0586-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0586AL396_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 73 80 4.0 69 1.51 84.748 1.94 REMARK ---------------------------------------------------------- MOLECULE T0586AL396_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK Aligment from pdb entry: 2du9_A ATOM 1 N LYS 12 -0.803 4.839 -2.892 1.00 0.00 N ATOM 2 CA LYS 12 -1.039 6.286 -2.616 1.00 0.00 C ATOM 3 C LYS 12 -0.468 7.147 -3.744 1.00 0.00 C ATOM 4 O LYS 12 0.606 6.858 -4.276 1.00 0.00 O ATOM 5 N PRO 13 -1.188 8.215 -4.124 1.00 0.00 N ATOM 6 CA PRO 13 -0.710 9.094 -5.196 1.00 0.00 C ATOM 7 C PRO 13 0.668 9.669 -4.857 1.00 0.00 C ATOM 8 O PRO 13 0.907 10.103 -3.728 1.00 0.00 O ATOM 9 N ILE 14 1.570 9.664 -5.835 1.00 0.00 N ATOM 10 CA ILE 14 2.919 10.184 -5.629 1.00 0.00 C ATOM 11 C ILE 14 2.955 11.616 -5.104 1.00 0.00 C ATOM 12 O ILE 14 3.707 11.918 -4.170 1.00 0.00 O ATOM 13 N TYR 15 2.141 12.490 -5.690 1.00 0.00 N ATOM 14 CA TYR 15 2.113 13.879 -5.253 1.00 0.00 C ATOM 15 C TYR 15 1.801 13.977 -3.755 1.00 0.00 C ATOM 16 O TYR 15 2.169 14.956 -3.105 1.00 0.00 O ATOM 17 N SER 16 1.129 12.963 -3.208 1.00 0.00 N ATOM 18 CA SER 16 0.794 12.972 -1.786 1.00 0.00 C ATOM 19 C SER 16 1.933 12.371 -0.955 1.00 0.00 C ATOM 20 O SER 16 2.164 12.790 0.183 1.00 0.00 O ATOM 21 N GLN 17 2.638 11.391 -1.519 1.00 0.00 N ATOM 22 CA GLN 17 3.772 10.775 -0.835 1.00 0.00 C ATOM 23 C GLN 17 4.851 11.839 -0.684 1.00 0.00 C ATOM 24 O GLN 17 5.539 11.922 0.337 1.00 0.00 O ATOM 25 N ILE 18 4.981 12.658 -1.720 1.00 0.00 N ATOM 26 CA ILE 18 5.942 13.740 -1.738 1.00 0.00 C ATOM 27 C ILE 18 5.602 14.684 -0.600 1.00 0.00 C ATOM 28 O ILE 18 6.417 14.920 0.287 1.00 0.00 O ATOM 29 N SER 19 4.384 15.212 -0.632 1.00 0.00 N ATOM 30 CA SER 19 3.917 16.141 0.389 1.00 0.00 C ATOM 31 C SER 19 4.143 15.589 1.798 1.00 0.00 C ATOM 32 O SER 19 4.583 16.306 2.688 1.00 0.00 O ATOM 33 N ASP 20 3.834 14.313 1.982 1.00 0.00 N ATOM 34 CA ASP 20 3.977 13.634 3.265 1.00 0.00 C ATOM 35 C ASP 20 5.441 13.512 3.693 1.00 0.00 C ATOM 36 O ASP 20 5.762 13.625 4.875 1.00 0.00 O ATOM 37 N TRP 21 6.320 13.269 2.724 1.00 0.00 N ATOM 38 CA TRP 21 7.750 13.140 2.992 1.00 0.00 C ATOM 39 C TRP 21 8.282 14.494 3.467 1.00 0.00 C ATOM 40 O TRP 21 9.128 14.566 4.363 1.00 0.00 O ATOM 41 N MET 22 7.780 15.567 2.866 1.00 0.00 N ATOM 42 CA MET 22 8.192 16.912 3.259 1.00 0.00 C ATOM 43 C MET 22 7.664 17.162 4.684 1.00 0.00 C ATOM 44 O MET 22 8.380 17.653 5.550 1.00 0.00 O ATOM 45 N LYS 23 6.409 16.804 4.920 1.00 0.00 N ATOM 46 CA LYS 23 5.803 16.988 6.230 1.00 0.00 C ATOM 47 C LYS 23 6.585 16.260 7.319 1.00 0.00 C ATOM 48 O LYS 23 6.736 16.768 8.423 1.00 0.00 O ATOM 49 N LYS 24 7.086 15.072 7.007 1.00 0.00 N ATOM 50 CA LYS 24 7.868 14.307 7.970 1.00 0.00 C ATOM 51 C LYS 24 9.063 15.126 8.459 1.00 0.00 C ATOM 52 O LYS 24 9.341 15.205 9.662 1.00 0.00 O ATOM 53 N GLN 25 9.772 15.725 7.508 1.00 0.00 N ATOM 54 CA GLN 25 10.949 16.527 7.802 1.00 0.00 C ATOM 55 C GLN 25 10.657 17.794 8.567 1.00 0.00 C ATOM 56 O GLN 25 11.509 18.252 9.320 1.00 0.00 O ATOM 57 N MET 26 9.481 18.386 8.385 1.00 0.00 N ATOM 58 CA MET 26 9.211 19.580 9.156 1.00 0.00 C ATOM 59 C MET 26 8.636 19.213 10.531 1.00 0.00 C ATOM 60 O MET 26 8.741 19.998 11.476 1.00 0.00 O ATOM 61 N ILE 27 8.044 18.024 10.645 1.00 0.00 N ATOM 62 CA ILE 27 7.481 17.586 11.917 1.00 0.00 C ATOM 63 C ILE 27 8.592 17.252 12.916 1.00 0.00 C ATOM 64 O ILE 27 8.494 17.614 14.090 1.00 0.00 O ATOM 65 N THR 28 9.645 16.584 12.443 1.00 0.00 N ATOM 66 CA THR 28 10.759 16.206 13.301 1.00 0.00 C ATOM 67 C THR 28 11.886 17.238 13.395 1.00 0.00 C ATOM 68 O THR 28 12.930 16.967 13.976 1.00 0.00 O ATOM 69 N GLY 29 11.680 18.416 12.816 1.00 0.00 N ATOM 70 CA GLY 29 12.701 19.448 12.875 1.00 0.00 C ATOM 71 C GLY 29 13.753 19.469 11.771 1.00 0.00 C ATOM 72 O GLY 29 14.474 20.457 11.646 1.00 0.00 O ATOM 73 N GLU 30 13.868 18.406 10.978 1.00 0.00 N ATOM 74 CA GLU 30 14.851 18.383 9.888 1.00 0.00 C ATOM 75 C GLU 30 14.760 19.646 9.002 1.00 0.00 C ATOM 76 O GLU 30 15.775 20.153 8.527 1.00 0.00 O ATOM 77 N TRP 31 13.541 20.132 8.772 1.00 0.00 N ATOM 78 CA TRP 31 13.308 21.341 7.978 1.00 0.00 C ATOM 79 C TRP 31 12.728 22.390 8.921 1.00 0.00 C ATOM 80 O TRP 31 11.702 22.155 9.572 1.00 0.00 O ATOM 81 N LYS 32 13.370 23.551 8.973 1.00 0.00 N ATOM 82 CA LYS 32 12.949 24.616 9.874 1.00 0.00 C ATOM 83 C LYS 32 12.004 25.619 9.257 1.00 0.00 C ATOM 84 O LYS 32 11.967 25.791 8.042 1.00 0.00 O ATOM 85 N GLY 33 11.243 26.287 10.116 1.00 0.00 N ATOM 86 CA GLY 33 10.305 27.302 9.674 1.00 0.00 C ATOM 87 C GLY 33 11.061 28.364 8.887 1.00 0.00 C ATOM 88 O GLY 33 12.132 28.816 9.295 1.00 0.00 O ATOM 89 N GLU 34 10.500 28.753 7.751 1.00 0.00 N ATOM 90 CA GLU 34 11.105 29.773 6.911 1.00 0.00 C ATOM 91 C GLU 34 12.398 29.365 6.243 1.00 0.00 C ATOM 92 O GLU 34 13.151 30.210 5.783 1.00 0.00 O ATOM 93 N ASP 35 12.658 28.069 6.209 1.00 0.00 N ATOM 94 CA ASP 35 13.834 27.558 5.540 1.00 0.00 C ATOM 95 C ASP 35 13.386 27.248 4.117 1.00 0.00 C ATOM 96 O ASP 35 12.210 26.999 3.862 1.00 0.00 O ATOM 97 N LYS 36 14.329 27.257 3.189 1.00 0.00 N ATOM 98 CA LYS 36 14.025 26.980 1.799 1.00 0.00 C ATOM 99 C LYS 36 13.822 25.479 1.615 1.00 0.00 C ATOM 100 O LYS 36 14.593 24.668 2.127 1.00 0.00 O ATOM 101 N LEU 37 12.773 25.122 0.886 1.00 0.00 N ATOM 102 CA LEU 37 12.447 23.730 0.609 1.00 0.00 C ATOM 103 C LEU 37 12.798 23.487 -0.844 1.00 0.00 C ATOM 104 O LEU 37 12.741 24.408 -1.650 1.00 0.00 O ATOM 105 N PRO 38 13.187 22.255 -1.205 1.00 0.00 N ATOM 106 CA PRO 38 13.512 22.051 -2.623 1.00 0.00 C ATOM 107 C PRO 38 12.314 22.441 -3.505 1.00 0.00 C ATOM 108 O PRO 38 11.159 22.155 -3.166 1.00 0.00 O ATOM 109 N SER 39 12.586 23.115 -4.620 1.00 0.00 N ATOM 110 CA SER 39 11.514 23.544 -5.518 1.00 0.00 C ATOM 111 C SER 39 10.946 22.375 -6.314 1.00 0.00 C ATOM 112 O SER 39 11.427 21.243 -6.223 1.00 0.00 O ATOM 113 N VAL 40 9.917 22.675 -7.099 1.00 0.00 N ATOM 114 CA VAL 40 9.263 21.688 -7.951 1.00 0.00 C ATOM 115 C VAL 40 10.300 20.991 -8.822 1.00 0.00 C ATOM 116 O VAL 40 10.289 19.768 -8.980 1.00 0.00 O ATOM 117 N ARG 41 11.203 21.789 -9.374 1.00 0.00 N ATOM 118 CA ARG 41 12.234 21.271 -10.256 1.00 0.00 C ATOM 119 C ARG 41 13.308 20.438 -9.565 1.00 0.00 C ATOM 120 O ARG 41 13.783 19.448 -10.121 1.00 0.00 O ATOM 121 N GLU 42 13.690 20.820 -8.354 1.00 0.00 N ATOM 122 CA GLU 42 14.710 20.065 -7.637 1.00 0.00 C ATOM 123 C GLU 42 14.193 18.691 -7.210 1.00 0.00 C ATOM 124 O GLU 42 14.944 17.713 -7.196 1.00 0.00 O ATOM 125 N MET 43 12.906 18.617 -6.876 1.00 0.00 N ATOM 126 CA MET 43 12.285 17.355 -6.479 1.00 0.00 C ATOM 127 C MET 43 12.187 16.443 -7.698 1.00 0.00 C ATOM 128 O MET 43 12.538 15.264 -7.635 1.00 0.00 O ATOM 129 N GLY 44 11.707 17.004 -8.806 1.00 0.00 N ATOM 130 CA GLY 44 11.554 16.264 -10.058 1.00 0.00 C ATOM 131 C GLY 44 12.907 15.771 -10.557 1.00 0.00 C ATOM 132 O GLY 44 12.987 14.783 -11.293 1.00 0.00 O ATOM 133 N VAL 45 13.966 16.469 -10.154 1.00 0.00 N ATOM 134 CA VAL 45 15.321 16.114 -10.543 1.00 0.00 C ATOM 135 C VAL 45 15.862 15.002 -9.652 1.00 0.00 C ATOM 136 O VAL 45 16.191 13.930 -10.155 1.00 0.00 O ATOM 137 N LYS 46 15.953 15.241 -8.341 1.00 0.00 N ATOM 138 CA LYS 46 16.460 14.203 -7.434 1.00 0.00 C ATOM 139 C LYS 46 15.623 12.959 -7.668 1.00 0.00 C ATOM 140 O LYS 46 16.043 12.043 -8.376 1.00 0.00 O ATOM 141 N LEU 47 14.442 12.916 -7.056 1.00 0.00 N ATOM 142 CA LEU 47 13.541 11.797 -7.291 1.00 0.00 C ATOM 143 C LEU 47 13.378 12.015 -8.782 1.00 0.00 C ATOM 144 O LEU 47 13.555 13.138 -9.257 1.00 0.00 O ATOM 145 N ALA 48 13.056 10.986 -9.541 1.00 0.00 N ATOM 146 CA ALA 48 12.931 11.212 -10.967 1.00 0.00 C ATOM 147 C ALA 48 11.487 11.080 -11.409 1.00 0.00 C ATOM 148 O ALA 48 11.105 10.133 -12.094 1.00 0.00 O ATOM 149 N VAL 49 10.699 12.072 -10.994 1.00 0.00 N ATOM 150 CA VAL 49 9.273 12.154 -11.272 1.00 0.00 C ATOM 151 C VAL 49 8.939 13.344 -12.165 1.00 0.00 C ATOM 152 O VAL 49 9.756 14.246 -12.345 1.00 0.00 O ATOM 153 N ASN 50 7.725 13.342 -12.707 1.00 0.00 N ATOM 154 CA ASN 50 7.267 14.416 -13.579 1.00 0.00 C ATOM 155 C ASN 50 7.149 15.700 -12.766 1.00 0.00 C ATOM 156 O ASN 50 6.492 15.729 -11.717 1.00 0.00 O ATOM 157 N PRO 51 7.790 16.780 -13.241 1.00 0.00 N ATOM 158 CA PRO 51 7.749 18.072 -12.552 1.00 0.00 C ATOM 159 C PRO 51 6.325 18.458 -12.164 1.00 0.00 C ATOM 160 O PRO 51 6.117 19.183 -11.191 1.00 0.00 O ATOM 161 N ASN 52 5.350 17.970 -12.928 1.00 0.00 N ATOM 162 CA ASN 52 3.946 18.279 -12.670 1.00 0.00 C ATOM 163 C ASN 52 3.427 17.594 -11.412 1.00 0.00 C ATOM 164 O ASN 52 2.553 18.129 -10.726 1.00 0.00 O ATOM 165 N THR 53 3.959 16.415 -11.107 1.00 0.00 N ATOM 166 CA THR 53 3.511 15.708 -9.924 1.00 0.00 C ATOM 167 C THR 53 4.169 16.313 -8.687 1.00 0.00 C ATOM 168 O THR 53 3.547 16.391 -7.629 1.00 0.00 O ATOM 169 N VAL 54 5.420 16.753 -8.830 1.00 0.00 N ATOM 170 CA VAL 54 6.150 17.367 -7.727 1.00 0.00 C ATOM 171 C VAL 54 5.451 18.668 -7.379 1.00 0.00 C ATOM 172 O VAL 54 5.251 18.993 -6.208 1.00 0.00 O ATOM 173 N SER 55 5.060 19.400 -8.415 1.00 0.00 N ATOM 174 CA SER 55 4.376 20.674 -8.249 1.00 0.00 C ATOM 175 C SER 55 3.022 20.478 -7.575 1.00 0.00 C ATOM 176 O SER 55 2.539 21.370 -6.877 1.00 0.00 O ATOM 177 N ARG 56 2.405 19.321 -7.795 1.00 0.00 N ATOM 178 CA ARG 56 1.120 19.031 -7.169 1.00 0.00 C ATOM 179 C ARG 56 1.391 18.805 -5.683 1.00 0.00 C ATOM 180 O ARG 56 0.637 19.264 -4.826 1.00 0.00 O ATOM 181 N ALA 57 2.475 18.093 -5.387 1.00 0.00 N ATOM 182 CA ALA 57 2.829 17.838 -4.006 1.00 0.00 C ATOM 183 C ALA 57 2.931 19.163 -3.279 1.00 0.00 C ATOM 184 O ALA 57 2.226 19.405 -2.292 1.00 0.00 O ATOM 185 N TYR 58 3.789 20.042 -3.791 1.00 0.00 N ATOM 186 CA TYR 58 3.990 21.348 -3.181 1.00 0.00 C ATOM 187 C TYR 58 2.724 22.192 -3.189 1.00 0.00 C ATOM 188 O TYR 58 2.437 22.896 -2.218 1.00 0.00 O ATOM 189 N GLN 59 1.952 22.109 -4.268 1.00 0.00 N ATOM 190 CA GLN 59 0.721 22.890 -4.356 1.00 0.00 C ATOM 191 C GLN 59 -0.205 22.467 -3.227 1.00 0.00 C ATOM 192 O GLN 59 -0.848 23.299 -2.582 1.00 0.00 O ATOM 193 N GLU 60 -0.260 21.164 -2.979 1.00 0.00 N ATOM 194 CA GLU 60 -1.101 20.657 -1.911 1.00 0.00 C ATOM 195 C GLU 60 -0.687 21.373 -0.628 1.00 0.00 C ATOM 196 O GLU 60 -1.528 21.923 0.090 1.00 0.00 O ATOM 197 N LEU 61 0.620 21.385 -0.357 1.00 0.00 N ATOM 198 CA LEU 61 1.148 22.036 0.844 1.00 0.00 C ATOM 199 C LEU 61 0.893 23.535 0.884 1.00 0.00 C ATOM 200 O LEU 61 0.626 24.100 1.952 1.00 0.00 O ATOM 201 N GLU 62 0.983 24.180 -0.276 1.00 0.00 N ATOM 202 CA GLU 62 0.750 25.617 -0.363 1.00 0.00 C ATOM 203 C GLU 62 -0.667 25.943 0.085 1.00 0.00 C ATOM 204 O GLU 62 -0.874 26.819 0.919 1.00 0.00 O ATOM 205 N ARG 63 -1.637 25.226 -0.473 1.00 0.00 N ATOM 206 CA ARG 63 -3.038 25.445 -0.137 1.00 0.00 C ATOM 207 C ARG 63 -3.364 25.006 1.292 1.00 0.00 C ATOM 208 O ARG 63 -4.368 25.424 1.867 1.00 0.00 O ATOM 209 N ALA 64 -2.509 24.166 1.865 1.00 0.00 N ATOM 210 CA ALA 64 -2.719 23.694 3.227 1.00 0.00 C ATOM 211 C ALA 64 -2.089 24.673 4.217 1.00 0.00 C ATOM 212 O ALA 64 -2.175 24.488 5.433 1.00 0.00 O ATOM 213 N GLY 65 -1.466 25.723 3.685 1.00 0.00 N ATOM 214 CA GLY 65 -0.824 26.712 4.532 1.00 0.00 C ATOM 215 C GLY 65 0.460 26.162 5.124 1.00 0.00 C ATOM 216 O GLY 65 0.930 26.627 6.167 1.00 0.00 O ATOM 217 N TYR 66 1.030 25.160 4.461 1.00 0.00 N ATOM 218 CA TYR 66 2.263 24.553 4.940 1.00 0.00 C ATOM 219 C TYR 66 3.503 25.172 4.297 1.00 0.00 C ATOM 220 O TYR 66 4.545 25.295 4.935 1.00 0.00 O ATOM 221 N ILE 67 3.390 25.555 3.032 1.00 0.00 N ATOM 222 CA ILE 67 4.510 26.167 2.333 1.00 0.00 C ATOM 223 C ILE 67 4.062 27.474 1.693 1.00 0.00 C ATOM 224 O ILE 67 2.867 27.723 1.531 1.00 0.00 O ATOM 225 N TYR 68 5.033 28.313 1.350 1.00 0.00 N ATOM 226 CA TYR 68 4.755 29.569 0.682 1.00 0.00 C ATOM 227 C TYR 68 5.918 29.837 -0.254 1.00 0.00 C ATOM 228 O TYR 68 7.026 29.325 -0.067 1.00 0.00 O ATOM 229 N ALA 69 5.664 30.628 -1.282 1.00 0.00 N ATOM 230 CA ALA 69 6.693 30.914 -2.255 1.00 0.00 C ATOM 231 C ALA 69 7.204 32.346 -2.202 1.00 0.00 C ATOM 232 O ALA 69 6.450 33.283 -1.942 1.00 0.00 O ATOM 233 N LYS 70 8.506 32.496 -2.408 1.00 0.00 N ATOM 234 CA LYS 70 9.122 33.810 -2.471 1.00 0.00 C ATOM 235 C LYS 70 9.474 33.929 -3.950 1.00 0.00 C ATOM 236 O LYS 70 10.264 33.137 -4.476 1.00 0.00 O ATOM 237 N ARG 71 8.869 34.900 -4.618 1.00 0.00 N ATOM 238 CA ARG 71 9.111 35.099 -6.036 1.00 0.00 C ATOM 239 C ARG 71 10.590 35.172 -6.391 1.00 0.00 C ATOM 240 O ARG 71 11.327 35.993 -5.849 1.00 0.00 O ATOM 241 N GLY 72 11.028 34.310 -7.301 1.00 0.00 N ATOM 242 CA GLY 72 12.416 34.345 -7.719 1.00 0.00 C ATOM 243 C GLY 72 13.390 33.636 -6.806 1.00 0.00 C ATOM 244 O GLY 72 14.584 33.570 -7.112 1.00 0.00 O ATOM 245 N MET 73 12.907 33.114 -5.681 1.00 0.00 N ATOM 246 CA MET 73 13.792 32.402 -4.769 1.00 0.00 C ATOM 247 C MET 73 13.409 30.945 -4.567 1.00 0.00 C ATOM 248 O MET 73 14.264 30.073 -4.637 1.00 0.00 O ATOM 249 N GLY 74 12.135 30.678 -4.303 1.00 0.00 N ATOM 250 CA GLY 74 11.716 29.308 -4.098 1.00 0.00 C ATOM 251 C GLY 74 10.576 29.130 -3.110 1.00 0.00 C ATOM 252 O GLY 74 9.778 30.037 -2.864 1.00 0.00 O ATOM 253 N SER 75 9.248 28.037 0.775 1.00 0.00 N ATOM 254 CA SER 75 9.668 28.031 2.163 1.00 0.00 C ATOM 255 C SER 75 8.617 27.405 3.072 1.00 0.00 C ATOM 256 O SER 75 7.432 27.432 2.757 1.00 0.00 O ATOM 257 N PHE 76 9.034 26.850 4.205 1.00 0.00 N ATOM 258 CA PHE 76 8.064 26.250 5.111 1.00 0.00 C ATOM 259 C PHE 76 7.401 27.358 5.923 1.00 0.00 C ATOM 260 O PHE 76 8.075 28.221 6.489 1.00 0.00 O ATOM 261 N VAL 77 6.073 27.339 5.958 1.00 0.00 N ATOM 262 CA VAL 77 5.295 28.334 6.687 1.00 0.00 C ATOM 263 C VAL 77 5.506 28.173 8.175 1.00 0.00 C ATOM 264 O VAL 77 5.762 27.073 8.654 1.00 0.00 O ATOM 265 N THR 78 5.383 29.271 8.911 1.00 0.00 N ATOM 266 CA THR 78 5.578 29.244 10.353 1.00 0.00 C ATOM 267 C THR 78 4.517 28.430 11.116 1.00 0.00 C ATOM 268 O THR 78 4.788 27.910 12.203 1.00 0.00 O ATOM 269 N SER 79 3.008 25.780 9.751 1.00 0.00 N ATOM 270 CA SER 79 3.001 24.439 9.175 1.00 0.00 C ATOM 271 C SER 79 3.179 23.347 10.235 1.00 0.00 C ATOM 272 O SER 79 2.473 22.342 10.220 1.00 0.00 O ATOM 273 N ASP 80 4.128 23.530 11.172 1.00 0.00 N ATOM 274 CA ASP 80 4.342 22.511 12.206 1.00 0.00 C ATOM 275 C ASP 80 3.131 22.305 13.112 1.00 0.00 C ATOM 276 O ASP 80 3.000 21.261 13.751 1.00 0.00 O ATOM 277 N LYS 81 2.257 23.305 13.163 1.00 0.00 N ATOM 278 CA LYS 81 1.046 23.231 13.973 1.00 0.00 C ATOM 279 C LYS 81 -0.044 22.560 13.146 1.00 0.00 C ATOM 280 O LYS 81 -0.679 21.603 13.602 1.00 0.00 O ATOM 281 N ALA 82 -0.254 23.059 11.929 1.00 0.00 N ATOM 282 CA ALA 82 -1.264 22.494 11.046 1.00 0.00 C ATOM 283 C ALA 82 -1.059 21.001 10.887 1.00 0.00 C ATOM 284 O ALA 82 -2.005 20.232 10.990 1.00 0.00 O ATOM 285 N LEU 83 0.183 20.595 10.641 1.00 0.00 N ATOM 286 CA LEU 83 0.505 19.183 10.454 1.00 0.00 C ATOM 287 C LEU 83 0.282 18.326 11.699 1.00 0.00 C ATOM 288 O LEU 83 -0.167 17.185 11.593 1.00 0.00 O ATOM 289 N PHE 84 0.628 18.863 12.868 1.00 0.00 N ATOM 290 CA PHE 84 0.446 18.150 14.130 1.00 0.00 C ATOM 291 C PHE 84 -1.054 17.878 14.259 1.00 0.00 C ATOM 292 O PHE 84 -1.491 16.790 14.640 1.00 0.00 O END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 292 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 35.34 88.9 144 91.1 158 ARMSMC SECONDARY STRUCTURE . . 24.32 91.9 86 100.0 86 ARMSMC SURFACE . . . . . . . . 36.45 88.5 96 87.3 110 ARMSMC BURIED . . . . . . . . 33.03 89.6 48 100.0 48 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 68 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 63 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 39 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 47 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 21 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 53 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 45 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 30 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 39 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 14 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 24 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 21 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 16 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 19 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 5 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 12 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 12 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 7 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 12 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 1.94 (Number of atoms: 73) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 1.94 73 91.2 80 CRMSCA CRN = ALL/NP . . . . . 0.0266 CRMSCA SECONDARY STRUCTURE . . 1.36 43 100.0 43 CRMSCA SURFACE . . . . . . . . 2.03 49 87.5 56 CRMSCA BURIED . . . . . . . . 1.76 24 100.0 24 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 1.90 292 74.1 394 CRMSMC SECONDARY STRUCTURE . . 1.35 172 80.8 213 CRMSMC SURFACE . . . . . . . . 1.97 196 71.0 276 CRMSMC BURIED . . . . . . . . 1.74 96 81.4 118 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 0.00 0 0.0 320 CRMSSC RELIABLE SIDE CHAINS . 0.00 0 0.0 286 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 184 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 224 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 96 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 1.90 292 45.6 640 CRMSALL SECONDARY STRUCTURE . . 1.35 172 48.3 356 CRMSALL SURFACE . . . . . . . . 1.97 196 43.8 448 CRMSALL BURIED . . . . . . . . 1.74 96 50.0 192 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.475 1.000 0.500 73 91.2 80 ERRCA SECONDARY STRUCTURE . . 1.085 1.000 0.500 43 100.0 43 ERRCA SURFACE . . . . . . . . 1.517 1.000 0.500 49 87.5 56 ERRCA BURIED . . . . . . . . 1.390 1.000 0.500 24 100.0 24 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.460 1.000 0.500 292 74.1 394 ERRMC SECONDARY STRUCTURE . . 1.089 1.000 0.500 172 80.8 213 ERRMC SURFACE . . . . . . . . 1.489 1.000 0.500 196 71.0 276 ERRMC BURIED . . . . . . . . 1.399 1.000 0.500 96 81.4 118 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.000 0.000 0.000 0 0.0 320 ERRSC RELIABLE SIDE CHAINS . 0.000 0.000 0.000 0 0.0 286 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 184 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 224 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 96 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.460 1.000 0.500 292 45.6 640 ERRALL SECONDARY STRUCTURE . . 1.089 1.000 0.500 172 48.3 356 ERRALL SURFACE . . . . . . . . 1.489 1.000 0.500 196 43.8 448 ERRALL BURIED . . . . . . . . 1.399 1.000 0.500 96 50.0 192 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 31 59 63 70 73 73 80 DISTCA CA (P) 38.75 73.75 78.75 87.50 91.25 80 DISTCA CA (RMS) 0.71 1.01 1.12 1.62 1.94 DISTCA ALL (N) 120 236 251 283 292 292 640 DISTALL ALL (P) 18.75 36.88 39.22 44.22 45.62 640 DISTALL ALL (RMS) 0.69 1.03 1.14 1.64 1.90 DISTALL END of the results output