####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 114 ( 456), selected 112 , name T0586AL396_1 # Molecule2: number of CA atoms 119 ( 953), selected 112 , name T0586.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0586AL396_1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 112 12 - 123 4.62 4.62 LCS_AVERAGE: 94.12 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 73 12 - 84 1.94 7.96 LCS_AVERAGE: 50.98 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 64 12 - 75 0.99 7.50 LCS_AVERAGE: 37.58 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 112 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT K 12 K 12 64 73 112 20 47 60 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT P 13 P 13 64 73 112 28 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT I 14 I 14 64 73 112 32 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT Y 15 Y 15 64 73 112 32 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT S 16 S 16 64 73 112 32 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT Q 17 Q 17 64 73 112 32 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT I 18 I 18 64 73 112 32 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT S 19 S 19 64 73 112 32 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT D 20 D 20 64 73 112 30 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT W 21 W 21 64 73 112 32 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT M 22 M 22 64 73 112 32 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT K 23 K 23 64 73 112 32 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT K 24 K 24 64 73 112 32 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT Q 25 Q 25 64 73 112 32 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT M 26 M 26 64 73 112 32 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT I 27 I 27 64 73 112 32 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT T 28 T 28 64 73 112 32 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT G 29 G 29 64 73 112 32 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT E 30 E 30 64 73 112 32 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT W 31 W 31 64 73 112 32 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT K 32 K 32 64 73 112 32 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT G 33 G 33 64 73 112 32 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT E 34 E 34 64 73 112 32 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT D 35 D 35 64 73 112 32 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT K 36 K 36 64 73 112 20 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT L 37 L 37 64 73 112 11 46 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT P 38 P 38 64 73 112 9 33 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT S 39 S 39 64 73 112 7 25 60 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT V 40 V 40 64 73 112 20 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT R 41 R 41 64 73 112 28 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT E 42 E 42 64 73 112 7 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT M 43 M 43 64 73 112 7 44 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT G 44 G 44 64 73 112 21 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT V 45 V 45 64 73 112 30 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT K 46 K 46 64 73 112 13 47 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT L 47 L 47 64 73 112 13 35 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT A 48 A 48 64 73 112 18 36 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT V 49 V 49 64 73 112 15 35 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT N 50 N 50 64 73 112 15 38 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT P 51 P 51 64 73 112 21 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT N 52 N 52 64 73 112 30 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT T 53 T 53 64 73 112 30 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT V 54 V 54 64 73 112 32 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT S 55 S 55 64 73 112 32 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT R 56 R 56 64 73 112 32 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT A 57 A 57 64 73 112 32 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT Y 58 Y 58 64 73 112 32 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT Q 59 Q 59 64 73 112 32 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT E 60 E 60 64 73 112 32 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT L 61 L 61 64 73 112 32 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT E 62 E 62 64 73 112 32 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT R 63 R 63 64 73 112 32 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT A 64 A 64 64 73 112 32 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT G 65 G 65 64 73 112 32 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT Y 66 Y 66 64 73 112 14 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT I 67 I 67 64 73 112 13 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT Y 68 Y 68 64 73 112 14 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT A 69 A 69 64 73 112 12 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT K 70 K 70 64 73 112 8 41 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT R 71 R 71 64 73 112 10 41 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT G 72 G 72 64 73 112 13 41 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT M 73 M 73 64 73 112 3 33 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT G 74 G 74 64 73 112 10 44 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT S 75 S 75 64 73 112 3 4 4 11 49 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT F 76 F 76 4 73 112 3 4 19 23 51 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT V 77 V 77 4 73 112 3 4 4 19 28 46 62 75 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT T 78 T 78 4 73 112 3 4 4 14 58 64 70 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT S 79 S 79 4 73 112 0 3 4 6 26 31 64 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT D 80 D 80 17 73 112 13 15 17 17 20 23 69 75 80 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT K 81 K 81 17 73 112 14 15 17 43 61 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT A 82 A 82 17 73 112 14 15 17 17 30 36 50 73 80 83 89 93 97 100 106 110 112 112 112 112 LCS_GDT L 83 L 83 17 73 112 14 15 17 17 30 36 44 75 80 83 89 93 97 100 106 110 112 112 112 112 LCS_GDT F 84 F 84 17 73 112 14 15 17 39 59 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT D 85 D 85 17 22 112 14 15 17 17 51 65 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT Q 86 Q 86 17 38 112 14 15 22 31 49 64 73 76 81 85 89 93 97 100 106 110 112 112 112 112 LCS_GDT L 87 L 87 17 38 112 14 15 30 39 59 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT K 88 K 88 17 38 112 14 15 17 22 41 59 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT K 89 K 89 17 38 112 14 15 17 17 51 65 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT E 90 E 90 17 38 112 14 19 30 46 63 67 73 76 81 85 89 94 97 100 106 110 112 112 112 112 LCS_GDT L 91 L 91 17 38 112 14 15 17 17 33 36 53 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT A 92 A 92 17 38 112 14 15 17 17 33 41 61 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT D 93 D 93 17 38 112 14 15 17 42 51 66 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT A 94 A 94 17 38 112 14 15 18 27 31 51 73 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT I 95 I 95 18 38 112 3 16 27 31 33 36 50 70 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT T 96 T 96 18 38 112 11 19 27 31 41 57 68 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT E 97 E 97 18 38 112 11 19 27 31 39 55 68 76 81 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT R 98 R 98 18 38 112 11 19 27 31 33 36 38 54 73 83 89 94 97 103 106 110 112 112 112 112 LCS_GDT F 99 F 99 18 38 112 11 19 27 31 33 36 46 60 73 81 89 94 97 103 106 110 112 112 112 112 LCS_GDT L 100 L 100 23 38 112 11 19 27 31 33 37 53 66 73 81 89 94 97 103 106 110 112 112 112 112 LCS_GDT E 101 E 101 23 38 112 11 19 27 31 33 36 47 62 73 81 89 94 97 103 106 110 112 112 112 112 LCS_GDT E 102 E 102 23 38 112 11 19 27 31 33 36 38 41 54 74 82 92 97 103 106 110 112 112 112 112 LCS_GDT A 103 A 103 23 38 112 11 19 27 31 33 36 38 42 55 75 84 92 97 103 106 110 112 112 112 112 LCS_GDT K 104 K 104 23 38 112 11 19 27 31 33 36 38 42 55 75 84 92 97 103 106 110 112 112 112 112 LCS_GDT S 105 S 105 23 38 112 9 19 27 31 33 36 38 42 52 56 68 85 93 99 106 110 112 112 112 112 LCS_GDT I 106 I 106 23 38 112 9 19 27 31 33 36 38 42 52 56 65 74 89 98 104 110 112 112 112 112 LCS_GDT G 107 G 107 23 38 112 11 19 27 31 33 36 38 42 52 56 65 74 87 98 103 110 112 112 112 112 LCS_GDT L 108 L 108 23 38 112 11 19 27 31 33 36 38 42 52 56 67 85 93 99 106 110 112 112 112 112 LCS_GDT D 109 D 109 23 38 112 8 18 27 31 33 36 38 42 52 56 73 87 94 100 106 110 112 112 112 112 LCS_GDT D 110 D 110 23 38 112 13 15 23 31 33 36 38 48 57 75 84 92 97 103 106 110 112 112 112 112 LCS_GDT Q 111 Q 111 23 38 112 13 18 25 31 33 37 41 48 66 76 85 92 97 103 106 110 112 112 112 112 LCS_GDT T 112 T 112 23 38 112 13 19 27 31 33 37 41 49 67 76 85 92 97 103 106 110 112 112 112 112 LCS_GDT A 113 A 113 23 38 112 13 19 27 31 33 37 41 61 68 78 85 92 97 103 106 110 112 112 112 112 LCS_GDT I 114 I 114 23 38 112 13 15 27 31 33 37 49 62 73 81 87 94 97 103 106 110 112 112 112 112 LCS_GDT E 115 E 115 23 38 112 13 18 27 31 33 37 50 63 73 81 87 94 97 103 106 110 112 112 112 112 LCS_GDT L 116 L 116 23 38 112 13 19 27 31 33 37 49 62 73 81 87 94 97 103 106 110 112 112 112 112 LCS_GDT L 117 L 117 23 38 112 13 16 27 31 33 37 51 66 73 81 88 94 97 103 106 110 112 112 112 112 LCS_GDT I 118 I 118 23 38 112 13 18 27 31 33 40 58 68 74 84 89 94 97 103 106 110 112 112 112 112 LCS_GDT K 119 K 119 23 38 112 13 19 27 31 33 37 53 68 74 84 89 94 97 103 106 110 112 112 112 112 LCS_GDT R 120 R 120 23 38 112 13 18 27 31 33 37 50 63 74 81 89 94 97 103 106 110 112 112 112 112 LCS_GDT S 121 S 121 23 38 112 13 18 27 31 33 37 56 68 79 84 89 94 97 103 106 110 112 112 112 112 LCS_GDT R 122 R 122 23 38 112 13 19 27 31 33 36 55 68 79 85 89 94 97 103 106 110 112 112 112 112 LCS_GDT N 123 N 123 23 38 112 3 18 27 31 33 36 47 62 74 84 89 94 97 103 106 110 112 112 112 112 LCS_AVERAGE LCS_A: 60.89 ( 37.58 50.98 94.12 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 32 48 61 63 63 67 73 76 81 85 89 94 97 103 106 110 112 112 112 112 GDT PERCENT_AT 26.89 40.34 51.26 52.94 52.94 56.30 61.34 63.87 68.07 71.43 74.79 78.99 81.51 86.55 89.08 92.44 94.12 94.12 94.12 94.12 GDT RMS_LOCAL 0.35 0.55 0.85 0.88 0.88 1.35 1.82 1.97 2.34 2.62 2.94 3.46 3.83 4.05 4.28 4.46 4.62 4.62 4.62 4.62 GDT RMS_ALL_AT 8.12 7.89 7.48 7.49 7.49 7.65 7.52 7.54 6.80 6.71 6.42 5.00 4.66 4.68 4.63 4.64 4.62 4.62 4.62 4.62 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA K 12 K 12 2.495 5 0.057 0.057 2.495 64.762 28.783 LGA P 13 P 13 1.840 3 0.024 0.024 2.102 70.833 40.476 LGA I 14 I 14 1.179 4 0.032 0.032 1.390 81.429 40.714 LGA Y 15 Y 15 0.823 8 0.069 0.069 0.984 90.476 30.159 LGA S 16 S 16 1.482 2 0.033 0.033 1.565 79.286 52.857 LGA Q 17 Q 17 1.457 5 0.032 0.032 1.478 81.429 36.190 LGA I 18 I 18 1.029 4 0.083 0.083 1.144 81.429 40.714 LGA S 19 S 19 1.237 2 0.020 0.020 1.635 77.143 51.429 LGA D 20 D 20 1.787 4 0.051 0.051 1.825 72.857 36.429 LGA W 21 W 21 1.631 10 0.042 0.042 1.816 72.857 20.816 LGA M 22 M 22 1.477 4 0.038 0.038 1.541 77.143 38.571 LGA K 23 K 23 1.592 5 0.019 0.019 1.645 72.857 32.381 LGA K 24 K 24 1.799 5 0.039 0.039 1.799 72.857 32.381 LGA Q 25 Q 25 1.780 5 0.036 0.036 1.814 72.857 32.381 LGA M 26 M 26 1.689 4 0.057 0.057 1.689 75.000 37.500 LGA I 27 I 27 1.560 4 0.083 0.083 1.844 72.857 36.429 LGA T 28 T 28 1.978 3 0.084 0.084 2.085 70.833 40.476 LGA G 29 G 29 1.918 0 0.128 0.128 1.989 72.857 72.857 LGA E 30 E 30 1.803 5 0.032 0.032 1.866 72.857 32.381 LGA W 31 W 31 1.380 10 0.012 0.012 1.655 75.000 21.429 LGA K 32 K 32 1.959 5 0.053 0.053 1.959 75.000 33.333 LGA G 33 G 33 1.220 0 0.019 0.019 1.535 77.143 77.143 LGA E 34 E 34 1.207 5 0.115 0.115 1.421 81.429 36.190 LGA D 35 D 35 1.593 4 0.096 0.096 1.593 81.548 40.774 LGA K 36 K 36 0.686 5 0.036 0.036 0.978 95.238 42.328 LGA L 37 L 37 0.457 4 0.064 0.064 0.975 95.238 47.619 LGA P 38 P 38 0.968 3 0.073 0.073 1.460 85.952 49.116 LGA S 39 S 39 1.397 2 0.062 0.062 1.397 81.429 54.286 LGA V 40 V 40 0.899 3 0.040 0.040 0.981 90.476 51.701 LGA R 41 R 41 0.751 7 0.032 0.032 0.756 90.476 32.900 LGA E 42 E 42 0.827 5 0.048 0.048 0.837 90.476 40.212 LGA M 43 M 43 1.258 4 0.052 0.052 1.397 81.429 40.714 LGA G 44 G 44 1.248 0 0.087 0.087 2.080 77.262 77.262 LGA V 45 V 45 1.328 3 0.080 0.080 1.837 79.286 45.306 LGA K 46 K 46 1.543 5 0.218 0.218 3.074 69.286 30.794 LGA L 47 L 47 1.369 4 0.768 0.768 3.822 72.024 36.012 LGA A 48 A 48 1.710 1 0.123 0.123 1.921 72.857 58.286 LGA V 49 V 49 1.498 3 0.067 0.067 1.652 75.000 42.857 LGA N 50 N 50 1.588 4 0.021 0.021 1.588 77.143 38.571 LGA P 51 P 51 1.218 3 0.021 0.021 1.329 85.952 49.116 LGA N 52 N 52 1.158 4 0.033 0.033 1.158 83.690 41.845 LGA T 53 T 53 0.856 3 0.025 0.025 0.919 90.476 51.701 LGA V 54 V 54 0.169 3 0.026 0.026 0.484 100.000 57.143 LGA S 55 S 55 0.383 2 0.062 0.062 0.468 100.000 66.667 LGA R 56 R 56 0.716 7 0.049 0.049 0.861 90.476 32.900 LGA A 57 A 57 0.601 1 0.090 0.090 0.601 92.857 74.286 LGA Y 58 Y 58 0.529 8 0.019 0.019 0.561 92.857 30.952 LGA Q 59 Q 59 0.543 5 0.027 0.027 0.660 90.476 40.212 LGA E 60 E 60 0.663 5 0.051 0.051 0.663 90.476 40.212 LGA L 61 L 61 0.653 4 0.011 0.011 0.653 90.476 45.238 LGA E 62 E 62 0.252 5 0.037 0.037 0.419 100.000 44.444 LGA R 63 R 63 0.602 7 0.087 0.087 0.749 92.857 33.766 LGA A 64 A 64 0.861 1 0.024 0.024 0.861 90.476 72.381 LGA G 65 G 65 0.594 0 0.078 0.078 0.594 90.476 90.476 LGA Y 66 Y 66 0.795 8 0.059 0.059 1.064 88.214 29.405 LGA I 67 I 67 0.730 4 0.024 0.024 0.787 90.476 45.238 LGA Y 68 Y 68 1.002 8 0.029 0.029 1.007 85.952 28.651 LGA A 69 A 69 1.234 1 0.044 0.044 1.757 77.143 61.714 LGA K 70 K 70 1.818 5 0.095 0.095 1.882 72.857 32.381 LGA R 71 R 71 1.920 7 0.028 0.028 1.920 72.857 26.494 LGA G 72 G 72 1.823 0 0.182 0.182 2.588 66.905 66.905 LGA M 73 M 73 2.134 4 0.232 0.232 3.133 63.095 31.548 LGA G 74 G 74 1.191 0 0.023 0.023 1.274 81.429 81.429 LGA S 75 S 75 3.347 2 0.022 0.022 4.123 50.357 33.571 LGA F 76 F 76 3.079 7 0.074 0.074 3.527 50.119 18.225 LGA V 77 V 77 4.135 3 0.093 0.093 4.135 48.571 27.755 LGA T 78 T 78 3.553 3 0.661 0.661 3.813 46.786 26.735 LGA S 79 S 79 5.050 2 0.598 0.598 7.329 26.429 17.619 LGA D 80 D 80 4.998 4 0.556 0.556 4.998 40.357 20.179 LGA K 81 K 81 3.184 5 0.079 0.079 3.750 46.667 20.741 LGA A 82 A 82 5.722 1 0.024 0.024 5.722 27.619 22.095 LGA L 83 L 83 5.251 4 0.057 0.057 5.251 31.667 15.833 LGA F 84 F 84 3.165 7 0.072 0.072 3.287 51.786 18.831 LGA D 85 D 85 4.215 4 0.078 0.078 4.323 40.357 20.179 LGA Q 86 Q 86 4.607 5 0.019 0.019 4.607 38.810 17.249 LGA L 87 L 87 3.475 4 0.090 0.090 3.475 50.000 25.000 LGA K 88 K 88 4.189 5 0.016 0.016 4.672 38.929 17.302 LGA K 89 K 89 4.473 5 0.030 0.030 4.473 40.238 17.884 LGA E 90 E 90 2.872 5 0.047 0.047 2.935 57.143 25.397 LGA L 91 L 91 4.580 4 0.027 0.027 5.447 34.762 17.381 LGA A 92 A 92 6.064 1 0.016 0.016 6.106 21.667 17.333 LGA D 93 D 93 4.239 4 0.030 0.030 4.475 40.238 20.119 LGA A 94 A 94 3.671 1 0.048 0.048 4.691 40.476 32.381 LGA I 95 I 95 6.218 4 0.084 0.084 7.508 15.952 7.976 LGA T 96 T 96 6.465 3 0.047 0.047 7.807 14.762 8.435 LGA E 97 E 97 6.798 5 0.030 0.030 8.821 10.119 4.497 LGA R 98 R 98 9.298 7 0.008 0.008 11.377 1.548 0.563 LGA F 99 F 99 10.956 7 0.024 0.024 12.826 0.000 0.000 LGA L 100 L 100 11.540 4 0.076 0.076 13.248 0.000 0.000 LGA E 101 E 101 12.532 5 0.026 0.026 14.799 0.000 0.000 LGA E 102 E 102 15.103 5 0.018 0.018 17.211 0.000 0.000 LGA A 103 A 103 16.208 1 0.066 0.066 18.481 0.000 0.000 LGA K 104 K 104 17.241 5 0.068 0.068 19.280 0.000 0.000 LGA S 105 S 105 18.817 2 0.112 0.112 21.362 0.000 0.000 LGA I 106 I 106 20.681 4 0.047 0.047 21.971 0.000 0.000 LGA G 107 G 107 21.331 0 0.080 0.080 21.505 0.000 0.000 LGA L 108 L 108 19.703 4 0.196 0.196 20.098 0.000 0.000 LGA D 109 D 109 18.993 4 0.037 0.037 19.197 0.000 0.000 LGA D 110 D 110 16.702 4 0.026 0.026 17.654 0.000 0.000 LGA Q 111 Q 111 16.406 5 0.050 0.050 16.775 0.000 0.000 LGA T 112 T 112 16.778 3 0.057 0.057 16.800 0.000 0.000 LGA A 113 A 113 15.361 1 0.019 0.019 16.024 0.000 0.000 LGA I 114 I 114 13.594 4 0.014 0.014 14.375 0.000 0.000 LGA E 115 E 115 13.764 5 0.017 0.017 13.862 0.000 0.000 LGA L 116 L 116 14.054 4 0.007 0.007 14.082 0.000 0.000 LGA L 117 L 117 12.207 4 0.021 0.021 12.938 0.000 0.000 LGA I 118 I 118 10.864 4 0.020 0.020 11.469 0.000 0.000 LGA K 119 K 119 11.974 5 0.033 0.033 11.974 0.000 0.000 LGA R 120 R 120 11.726 7 0.015 0.015 11.864 0.000 0.000 LGA S 121 S 121 9.573 2 0.017 0.017 10.416 1.190 0.794 LGA R 122 R 122 9.557 7 0.168 0.168 9.767 0.714 0.260 LGA N 123 N 123 10.821 4 0.424 0.424 10.821 2.143 1.071 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 112 448 448 100.00 897 448 49.94 119 SUMMARY(RMSD_GDC): 4.623 4.608 4.608 50.472 27.406 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 114 119 4.0 76 1.97 62.395 60.239 3.673 LGA_LOCAL RMSD: 1.969 Number of atoms: 76 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 7.537 Number of assigned atoms: 112 Std_ASGN_ATOMS RMSD: 4.623 Standard rmsd on all 112 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.053255 * X + 0.019403 * Y + 0.998392 * Z + -47.599400 Y_new = -0.222626 * X + -0.974417 * Y + 0.030812 * Z + 60.200394 Z_new = 0.973448 * X + -0.223909 * Y + -0.047573 * Z + -7.322659 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.335998 -1.339841 -1.780147 [DEG: -76.5470 -76.7673 -101.9949 ] ZXZ: 1.601648 1.618387 1.796880 [DEG: 91.7677 92.7267 102.9537 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0586AL396_1 REMARK 2: T0586.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0586AL396_1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 114 119 4.0 76 1.97 60.239 4.62 REMARK ---------------------------------------------------------- MOLECULE T0586AL396_1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK Aligment from pdb entry: 2du9_A ATOM 1 N LYS 12 -0.469 4.847 -2.038 1.00 0.00 N ATOM 2 CA LYS 12 -0.702 6.296 -1.770 1.00 0.00 C ATOM 3 C LYS 12 -0.218 7.144 -2.948 1.00 0.00 C ATOM 4 O LYS 12 0.821 6.857 -3.545 1.00 0.00 O ATOM 5 N PRO 13 -0.974 8.198 -3.295 1.00 0.00 N ATOM 6 CA PRO 13 -0.579 9.064 -4.411 1.00 0.00 C ATOM 7 C PRO 13 0.812 9.659 -4.174 1.00 0.00 C ATOM 8 O PRO 13 1.121 10.114 -3.070 1.00 0.00 O ATOM 9 N ILE 14 1.647 9.647 -5.210 1.00 0.00 N ATOM 10 CA ILE 14 3.001 10.185 -5.103 1.00 0.00 C ATOM 11 C ILE 14 3.055 11.625 -4.604 1.00 0.00 C ATOM 12 O ILE 14 3.865 11.950 -3.728 1.00 0.00 O ATOM 13 N TYR 15 2.193 12.481 -5.148 1.00 0.00 N ATOM 14 CA TYR 15 2.179 13.876 -4.732 1.00 0.00 C ATOM 15 C TYR 15 1.967 13.996 -3.219 1.00 0.00 C ATOM 16 O TYR 15 2.367 14.989 -2.610 1.00 0.00 O ATOM 17 N SER 16 1.345 12.984 -2.612 1.00 0.00 N ATOM 18 CA SER 16 1.107 13.013 -1.170 1.00 0.00 C ATOM 19 C SER 16 2.305 12.438 -0.408 1.00 0.00 C ATOM 20 O SER 16 2.607 12.878 0.704 1.00 0.00 O ATOM 21 N GLN 17 2.981 11.456 -1.003 1.00 0.00 N ATOM 22 CA GLN 17 4.166 10.863 -0.387 1.00 0.00 C ATOM 23 C GLN 17 5.240 11.940 -0.326 1.00 0.00 C ATOM 24 O GLN 17 5.995 12.047 0.646 1.00 0.00 O ATOM 25 N ILE 18 5.292 12.743 -1.381 1.00 0.00 N ATOM 26 CA ILE 18 6.237 13.835 -1.481 1.00 0.00 C ATOM 27 C ILE 18 5.963 14.794 -0.337 1.00 0.00 C ATOM 28 O ILE 18 6.833 15.052 0.489 1.00 0.00 O ATOM 29 N SER 19 4.739 15.308 -0.296 1.00 0.00 N ATOM 30 CA SER 19 4.332 16.249 0.740 1.00 0.00 C ATOM 31 C SER 19 4.658 15.723 2.139 1.00 0.00 C ATOM 32 O SER 19 5.149 16.459 2.986 1.00 0.00 O ATOM 33 N ASP 20 4.377 14.447 2.364 1.00 0.00 N ATOM 34 CA ASP 20 4.613 13.791 3.644 1.00 0.00 C ATOM 35 C ASP 20 6.103 13.691 3.975 1.00 0.00 C ATOM 36 O ASP 20 6.502 13.826 5.131 1.00 0.00 O ATOM 37 N TRP 21 6.918 13.441 2.953 1.00 0.00 N ATOM 38 CA TRP 21 8.365 13.331 3.126 1.00 0.00 C ATOM 39 C TRP 21 8.911 14.698 3.543 1.00 0.00 C ATOM 40 O TRP 21 9.815 14.794 4.379 1.00 0.00 O ATOM 41 N MET 22 8.358 15.756 2.960 1.00 0.00 N ATOM 42 CA MET 22 8.780 17.111 3.303 1.00 0.00 C ATOM 43 C MET 22 8.347 17.379 4.756 1.00 0.00 C ATOM 44 O MET 22 9.114 17.892 5.565 1.00 0.00 O ATOM 45 N LYS 23 7.114 17.013 5.082 1.00 0.00 N ATOM 46 CA LYS 23 6.595 17.212 6.427 1.00 0.00 C ATOM 47 C LYS 23 7.456 16.509 7.472 1.00 0.00 C ATOM 48 O LYS 23 7.676 17.037 8.555 1.00 0.00 O ATOM 49 N LYS 24 7.949 15.321 7.146 1.00 0.00 N ATOM 50 CA LYS 24 8.803 14.581 8.066 1.00 0.00 C ATOM 51 C LYS 24 10.018 15.420 8.461 1.00 0.00 C ATOM 52 O LYS 24 10.375 15.521 9.641 1.00 0.00 O ATOM 53 N GLN 25 10.655 16.010 7.455 1.00 0.00 N ATOM 54 CA GLN 25 11.840 16.829 7.656 1.00 0.00 C ATOM 55 C GLN 25 11.586 18.105 8.419 1.00 0.00 C ATOM 56 O GLN 25 12.481 18.585 9.106 1.00 0.00 O ATOM 57 N MET 26 10.394 18.683 8.307 1.00 0.00 N ATOM 58 CA MET 26 10.162 19.886 9.077 1.00 0.00 C ATOM 59 C MET 26 9.684 19.536 10.493 1.00 0.00 C ATOM 60 O MET 26 9.844 20.338 11.415 1.00 0.00 O ATOM 61 N ILE 27 9.115 18.342 10.665 1.00 0.00 N ATOM 62 CA ILE 27 8.644 17.919 11.978 1.00 0.00 C ATOM 63 C ILE 27 9.822 17.614 12.906 1.00 0.00 C ATOM 64 O ILE 27 9.799 17.994 14.077 1.00 0.00 O ATOM 65 N THR 28 10.849 16.949 12.373 1.00 0.00 N ATOM 66 CA THR 28 12.022 16.596 13.161 1.00 0.00 C ATOM 67 C THR 28 13.141 17.641 13.162 1.00 0.00 C ATOM 68 O THR 28 14.225 17.391 13.676 1.00 0.00 O ATOM 69 N GLY 29 12.884 18.808 12.580 1.00 0.00 N ATOM 70 CA GLY 29 13.894 19.851 12.553 1.00 0.00 C ATOM 71 C GLY 29 14.870 19.865 11.381 1.00 0.00 C ATOM 72 O GLY 29 15.570 20.858 11.193 1.00 0.00 O ATOM 73 N GLU 30 14.944 18.791 10.600 1.00 0.00 N ATOM 74 CA GLU 30 15.851 18.760 9.446 1.00 0.00 C ATOM 75 C GLU 30 15.687 20.006 8.548 1.00 0.00 C ATOM 76 O GLU 30 16.662 20.517 7.998 1.00 0.00 O ATOM 77 N TRP 31 14.450 20.476 8.394 1.00 0.00 N ATOM 78 CA TRP 31 14.151 21.670 7.598 1.00 0.00 C ATOM 79 C TRP 31 13.623 22.728 8.561 1.00 0.00 C ATOM 80 O TRP 31 12.646 22.493 9.283 1.00 0.00 O ATOM 81 N LYS 32 14.254 23.896 8.552 1.00 0.00 N ATOM 82 CA LYS 32 13.882 24.972 9.462 1.00 0.00 C ATOM 83 C LYS 32 12.887 25.955 8.895 1.00 0.00 C ATOM 84 O LYS 32 12.766 26.106 7.682 1.00 0.00 O ATOM 85 N GLY 33 12.177 26.628 9.792 1.00 0.00 N ATOM 86 CA GLY 33 11.200 27.626 9.398 1.00 0.00 C ATOM 87 C GLY 33 11.890 28.683 8.545 1.00 0.00 C ATOM 88 O GLY 33 12.980 29.152 8.873 1.00 0.00 O ATOM 89 N GLU 34 11.250 29.048 7.444 1.00 0.00 N ATOM 90 CA GLU 34 11.785 30.060 6.549 1.00 0.00 C ATOM 91 C GLU 34 13.035 29.655 5.803 1.00 0.00 C ATOM 92 O GLU 34 13.746 30.499 5.280 1.00 0.00 O ATOM 93 N ASP 35 13.306 28.361 5.771 1.00 0.00 N ATOM 94 CA ASP 35 14.441 27.851 5.033 1.00 0.00 C ATOM 95 C ASP 35 13.903 27.513 3.648 1.00 0.00 C ATOM 96 O ASP 35 12.715 27.248 3.477 1.00 0.00 O ATOM 97 N LYS 36 14.781 27.517 2.659 1.00 0.00 N ATOM 98 CA LYS 36 14.388 27.213 1.297 1.00 0.00 C ATOM 99 C LYS 36 14.190 25.708 1.151 1.00 0.00 C ATOM 100 O LYS 36 15.002 24.913 1.622 1.00 0.00 O ATOM 101 N LEU 37 13.099 25.327 0.500 1.00 0.00 N ATOM 102 CA LEU 37 12.770 23.928 0.267 1.00 0.00 C ATOM 103 C LEU 37 13.026 23.665 -1.203 1.00 0.00 C ATOM 104 O LEU 37 12.905 24.572 -2.017 1.00 0.00 O ATOM 105 N PRO 38 13.404 22.431 -1.569 1.00 0.00 N ATOM 106 CA PRO 38 13.635 22.207 -3.002 1.00 0.00 C ATOM 107 C PRO 38 12.377 22.570 -3.808 1.00 0.00 C ATOM 108 O PRO 38 11.250 22.278 -3.388 1.00 0.00 O ATOM 109 N SER 39 12.565 23.229 -4.950 1.00 0.00 N ATOM 110 CA SER 39 11.431 23.632 -5.779 1.00 0.00 C ATOM 111 C SER 39 10.824 22.445 -6.517 1.00 0.00 C ATOM 112 O SER 39 11.323 21.319 -6.441 1.00 0.00 O ATOM 113 N VAL 40 9.742 22.721 -7.236 1.00 0.00 N ATOM 114 CA VAL 40 9.043 21.714 -8.027 1.00 0.00 C ATOM 115 C VAL 40 10.027 21.012 -8.954 1.00 0.00 C ATOM 116 O VAL 40 10.019 19.787 -9.092 1.00 0.00 O ATOM 117 N ARG 41 10.882 21.811 -9.578 1.00 0.00 N ATOM 118 CA ARG 41 11.857 21.289 -10.519 1.00 0.00 C ATOM 119 C ARG 41 12.985 20.478 -9.889 1.00 0.00 C ATOM 120 O ARG 41 13.433 19.484 -10.460 1.00 0.00 O ATOM 121 N GLU 42 13.443 20.884 -8.712 1.00 0.00 N ATOM 122 CA GLU 42 14.517 20.152 -8.054 1.00 0.00 C ATOM 123 C GLU 42 14.045 18.780 -7.571 1.00 0.00 C ATOM 124 O GLU 42 14.807 17.810 -7.592 1.00 0.00 O ATOM 125 N MET 43 12.785 18.698 -7.150 1.00 0.00 N ATOM 126 CA MET 43 12.206 17.436 -6.693 1.00 0.00 C ATOM 127 C MET 43 12.037 16.503 -7.889 1.00 0.00 C ATOM 128 O MET 43 12.404 15.330 -7.831 1.00 0.00 O ATOM 129 N GLY 44 11.477 17.042 -8.971 1.00 0.00 N ATOM 130 CA GLY 44 11.250 16.279 -10.198 1.00 0.00 C ATOM 131 C GLY 44 12.571 15.792 -10.778 1.00 0.00 C ATOM 132 O GLY 44 12.613 14.793 -11.502 1.00 0.00 O ATOM 133 N VAL 45 13.647 16.507 -10.459 1.00 0.00 N ATOM 134 CA VAL 45 14.976 16.160 -10.932 1.00 0.00 C ATOM 135 C VAL 45 15.588 15.068 -10.062 1.00 0.00 C ATOM 136 O VAL 45 15.896 13.991 -10.570 1.00 0.00 O ATOM 137 N LYS 46 15.764 15.330 -8.764 1.00 0.00 N ATOM 138 CA LYS 46 16.343 14.312 -7.877 1.00 0.00 C ATOM 139 C LYS 46 15.507 13.056 -8.035 1.00 0.00 C ATOM 140 O LYS 46 15.889 12.133 -8.755 1.00 0.00 O ATOM 141 N LEU 47 14.370 13.010 -7.344 1.00 0.00 N ATOM 142 CA LEU 47 13.468 11.879 -7.500 1.00 0.00 C ATOM 143 C LEU 47 13.202 12.071 -8.981 1.00 0.00 C ATOM 144 O LEU 47 13.335 13.188 -9.483 1.00 0.00 O ATOM 145 N ALA 48 12.843 11.026 -9.700 1.00 0.00 N ATOM 146 CA ALA 48 12.620 11.228 -11.118 1.00 0.00 C ATOM 147 C ALA 48 11.151 11.074 -11.459 1.00 0.00 C ATOM 148 O ALA 48 10.734 10.111 -12.102 1.00 0.00 O ATOM 149 N VAL 49 10.382 12.064 -11.008 1.00 0.00 N ATOM 150 CA VAL 49 8.939 12.127 -11.191 1.00 0.00 C ATOM 151 C VAL 49 8.533 13.298 -12.078 1.00 0.00 C ATOM 152 O VAL 49 9.325 14.206 -12.327 1.00 0.00 O ATOM 153 N ASN 50 7.285 13.275 -12.537 1.00 0.00 N ATOM 154 CA ASN 50 6.758 14.330 -13.393 1.00 0.00 C ATOM 155 C ASN 50 6.680 15.625 -12.594 1.00 0.00 C ATOM 156 O ASN 50 6.094 15.665 -11.504 1.00 0.00 O ATOM 157 N PRO 51 7.275 16.704 -13.128 1.00 0.00 N ATOM 158 CA PRO 51 7.266 18.006 -12.458 1.00 0.00 C ATOM 159 C PRO 51 5.866 18.384 -11.981 1.00 0.00 C ATOM 160 O PRO 51 5.716 19.123 -11.009 1.00 0.00 O ATOM 161 N ASN 52 4.848 17.874 -12.671 1.00 0.00 N ATOM 162 CA ASN 52 3.461 18.173 -12.323 1.00 0.00 C ATOM 163 C ASN 52 3.036 17.503 -11.023 1.00 0.00 C ATOM 164 O ASN 52 2.204 18.040 -10.289 1.00 0.00 O ATOM 165 N THR 53 3.600 16.335 -10.736 1.00 0.00 N ATOM 166 CA THR 53 3.240 15.643 -9.514 1.00 0.00 C ATOM 167 C THR 53 3.973 16.275 -8.334 1.00 0.00 C ATOM 168 O THR 53 3.422 16.364 -7.238 1.00 0.00 O ATOM 169 N VAL 54 5.206 16.725 -8.567 1.00 0.00 N ATOM 170 CA VAL 54 6.002 17.365 -7.526 1.00 0.00 C ATOM 171 C VAL 54 5.313 18.664 -7.152 1.00 0.00 C ATOM 172 O VAL 54 5.188 19.006 -5.976 1.00 0.00 O ATOM 173 N SER 55 4.844 19.374 -8.171 1.00 0.00 N ATOM 174 CA SER 55 4.159 20.644 -7.980 1.00 0.00 C ATOM 175 C SER 55 2.856 20.446 -7.213 1.00 0.00 C ATOM 176 O SER 55 2.410 21.344 -6.498 1.00 0.00 O ATOM 177 N ARG 56 2.238 19.279 -7.373 1.00 0.00 N ATOM 178 CA ARG 56 1.001 18.986 -6.658 1.00 0.00 C ATOM 179 C ARG 56 1.374 18.787 -5.190 1.00 0.00 C ATOM 180 O ARG 56 0.674 19.253 -4.291 1.00 0.00 O ATOM 181 N ALA 57 2.483 18.091 -4.957 1.00 0.00 N ATOM 182 CA ALA 57 2.933 17.863 -3.598 1.00 0.00 C ATOM 183 C ALA 57 3.068 19.200 -2.900 1.00 0.00 C ATOM 184 O ALA 57 2.428 19.451 -1.872 1.00 0.00 O ATOM 185 N TYR 58 3.879 20.079 -3.483 1.00 0.00 N ATOM 186 CA TYR 58 4.106 21.398 -2.909 1.00 0.00 C ATOM 187 C TYR 58 2.833 22.228 -2.844 1.00 0.00 C ATOM 188 O TYR 58 2.604 22.945 -1.867 1.00 0.00 O ATOM 189 N GLN 59 1.991 22.120 -3.868 1.00 0.00 N ATOM 190 CA GLN 59 0.749 22.886 -3.885 1.00 0.00 C ATOM 191 C GLN 59 -0.095 22.473 -2.690 1.00 0.00 C ATOM 192 O GLN 59 -0.703 23.308 -2.016 1.00 0.00 O ATOM 193 N GLU 60 -0.118 21.173 -2.419 1.00 0.00 N ATOM 194 CA GLU 60 -0.880 20.674 -1.288 1.00 0.00 C ATOM 195 C GLU 60 -0.389 21.416 -0.047 1.00 0.00 C ATOM 196 O GLU 60 -1.186 21.969 0.717 1.00 0.00 O ATOM 197 N LEU 61 0.933 21.446 0.135 1.00 0.00 N ATOM 198 CA LEU 61 1.532 22.122 1.287 1.00 0.00 C ATOM 199 C LEU 61 1.263 23.619 1.321 1.00 0.00 C ATOM 200 O LEU 61 1.062 24.199 2.395 1.00 0.00 O ATOM 201 N GLU 62 1.268 24.246 0.148 1.00 0.00 N ATOM 202 CA GLU 62 1.013 25.679 0.054 1.00 0.00 C ATOM 203 C GLU 62 -0.373 25.997 0.591 1.00 0.00 C ATOM 204 O GLU 62 -0.534 26.885 1.423 1.00 0.00 O ATOM 205 N ARG 63 -1.371 25.261 0.110 1.00 0.00 N ATOM 206 CA ARG 63 -2.748 25.471 0.537 1.00 0.00 C ATOM 207 C ARG 63 -2.973 25.053 1.991 1.00 0.00 C ATOM 208 O ARG 63 -3.941 25.469 2.625 1.00 0.00 O ATOM 209 N ALA 64 -2.072 24.231 2.518 1.00 0.00 N ATOM 210 CA ALA 64 -2.184 23.779 3.898 1.00 0.00 C ATOM 211 C ALA 64 -1.501 24.781 4.829 1.00 0.00 C ATOM 212 O ALA 64 -1.503 24.615 6.050 1.00 0.00 O ATOM 213 N GLY 65 -0.927 25.828 4.240 1.00 0.00 N ATOM 214 CA GLY 65 -0.241 26.838 5.026 1.00 0.00 C ATOM 215 C GLY 65 1.086 26.310 5.538 1.00 0.00 C ATOM 216 O GLY 65 1.619 26.798 6.540 1.00 0.00 O ATOM 217 N TYR 66 1.621 25.304 4.855 1.00 0.00 N ATOM 218 CA TYR 66 2.891 24.717 5.259 1.00 0.00 C ATOM 219 C TYR 66 4.077 25.338 4.525 1.00 0.00 C ATOM 220 O TYR 66 5.159 25.483 5.089 1.00 0.00 O ATOM 221 N ILE 67 3.876 25.699 3.264 1.00 0.00 N ATOM 222 CA ILE 67 4.940 26.311 2.482 1.00 0.00 C ATOM 223 C ILE 67 4.435 27.603 1.853 1.00 0.00 C ATOM 224 O ILE 67 3.229 27.837 1.768 1.00 0.00 O ATOM 225 N TYR 68 5.371 28.446 1.433 1.00 0.00 N ATOM 226 CA TYR 68 5.035 29.688 0.765 1.00 0.00 C ATOM 227 C TYR 68 6.129 29.953 -0.251 1.00 0.00 C ATOM 228 O TYR 68 7.253 29.455 -0.131 1.00 0.00 O ATOM 229 N ALA 69 5.798 30.724 -1.272 1.00 0.00 N ATOM 230 CA ALA 69 6.756 31.004 -2.316 1.00 0.00 C ATOM 231 C ALA 69 7.253 32.443 -2.321 1.00 0.00 C ATOM 232 O ALA 69 6.507 33.376 -2.025 1.00 0.00 O ATOM 233 N LYS 70 8.536 32.602 -2.615 1.00 0.00 N ATOM 234 CA LYS 70 9.131 33.922 -2.740 1.00 0.00 C ATOM 235 C LYS 70 9.382 34.019 -4.242 1.00 0.00 C ATOM 236 O LYS 70 10.144 33.227 -4.807 1.00 0.00 O ATOM 237 N ARG 71 8.724 34.973 -4.882 1.00 0.00 N ATOM 238 CA ARG 71 8.867 35.152 -6.316 1.00 0.00 C ATOM 239 C ARG 71 10.318 35.234 -6.772 1.00 0.00 C ATOM 240 O ARG 71 11.080 36.071 -6.293 1.00 0.00 O ATOM 241 N GLY 72 10.704 34.362 -7.695 1.00 0.00 N ATOM 242 CA GLY 72 12.060 34.404 -8.205 1.00 0.00 C ATOM 243 C GLY 72 13.102 33.721 -7.349 1.00 0.00 C ATOM 244 O GLY 72 14.273 33.661 -7.734 1.00 0.00 O ATOM 245 N MET 73 12.701 33.211 -6.186 1.00 0.00 N ATOM 246 CA MET 73 13.653 32.524 -5.325 1.00 0.00 C ATOM 247 C MET 73 13.301 31.066 -5.074 1.00 0.00 C ATOM 248 O MET 73 14.160 30.202 -5.188 1.00 0.00 O ATOM 249 N GLY 74 12.050 30.791 -4.722 1.00 0.00 N ATOM 250 CA GLY 74 11.662 29.420 -4.467 1.00 0.00 C ATOM 251 C GLY 74 10.593 29.247 -3.403 1.00 0.00 C ATOM 252 O GLY 74 9.803 30.150 -3.117 1.00 0.00 O ATOM 253 N SER 75 9.541 28.204 0.580 1.00 0.00 N ATOM 254 CA SER 75 10.053 28.225 1.936 1.00 0.00 C ATOM 255 C SER 75 9.073 27.604 2.924 1.00 0.00 C ATOM 256 O SER 75 7.869 27.613 2.688 1.00 0.00 O ATOM 257 N PHE 76 9.571 27.071 4.035 1.00 0.00 N ATOM 258 CA PHE 76 8.671 26.476 5.013 1.00 0.00 C ATOM 259 C PHE 76 8.051 27.591 5.851 1.00 0.00 C ATOM 260 O PHE 76 8.752 28.470 6.357 1.00 0.00 O ATOM 261 N VAL 77 6.728 27.559 5.975 1.00 0.00 N ATOM 262 CA VAL 77 5.990 28.557 6.739 1.00 0.00 C ATOM 263 C VAL 77 6.302 28.423 8.212 1.00 0.00 C ATOM 264 O VAL 77 6.602 27.334 8.689 1.00 0.00 O ATOM 265 N THR 78 6.217 29.531 8.936 1.00 0.00 N ATOM 266 CA THR 78 6.508 29.531 10.363 1.00 0.00 C ATOM 267 C THR 78 5.510 28.718 11.208 1.00 0.00 C ATOM 268 O THR 78 5.859 28.219 12.282 1.00 0.00 O ATOM 269 N SER 79 3.943 26.031 9.989 1.00 0.00 N ATOM 270 CA SER 79 3.912 24.681 9.436 1.00 0.00 C ATOM 271 C SER 79 4.173 23.608 10.499 1.00 0.00 C ATOM 272 O SER 79 3.479 22.595 10.547 1.00 0.00 O ATOM 273 N ASP 80 5.181 23.816 11.367 1.00 0.00 N ATOM 274 CA ASP 80 5.475 22.817 12.400 1.00 0.00 C ATOM 275 C ASP 80 4.331 22.613 13.389 1.00 0.00 C ATOM 276 O ASP 80 4.254 21.579 14.051 1.00 0.00 O ATOM 277 N LYS 81 3.450 23.604 13.483 1.00 0.00 N ATOM 278 CA LYS 81 2.297 23.532 14.373 1.00 0.00 C ATOM 279 C LYS 81 1.162 22.836 13.632 1.00 0.00 C ATOM 280 O LYS 81 0.570 21.880 14.144 1.00 0.00 O ATOM 281 N ALA 82 0.865 23.313 12.424 1.00 0.00 N ATOM 282 CA ALA 82 -0.195 22.723 11.619 1.00 0.00 C ATOM 283 C ALA 82 0.016 21.229 11.471 1.00 0.00 C ATOM 284 O ALA 82 -0.913 20.452 11.649 1.00 0.00 O ATOM 285 N LEU 83 1.243 20.832 11.148 1.00 0.00 N ATOM 286 CA LEU 83 1.568 19.421 10.962 1.00 0.00 C ATOM 287 C LEU 83 1.438 18.582 12.233 1.00 0.00 C ATOM 288 O LEU 83 0.996 17.435 12.176 1.00 0.00 O ATOM 289 N PHE 84 1.855 19.142 13.367 1.00 0.00 N ATOM 290 CA PHE 84 1.767 18.447 14.649 1.00 0.00 C ATOM 291 C PHE 84 0.282 18.163 14.883 1.00 0.00 C ATOM 292 O PHE 84 -0.116 17.077 15.310 1.00 0.00 O ATOM 293 N ASP 85 -0.518 19.172 14.567 1.00 0.00 N ATOM 294 CA ASP 85 -1.962 19.153 14.695 1.00 0.00 C ATOM 295 C ASP 85 -2.611 18.045 13.857 1.00 0.00 C ATOM 296 O ASP 85 -3.364 17.223 14.382 1.00 0.00 O ATOM 297 N GLN 86 -2.321 18.021 12.559 1.00 0.00 N ATOM 298 CA GLN 86 -2.891 17.009 11.665 1.00 0.00 C ATOM 299 C GLN 86 -2.452 15.588 12.023 1.00 0.00 C ATOM 300 O GLN 86 -3.201 14.630 11.830 1.00 0.00 O ATOM 301 N LEU 87 -1.233 15.445 12.531 1.00 0.00 N ATOM 302 CA LEU 87 -0.732 14.126 12.888 1.00 0.00 C ATOM 303 C LEU 87 -1.303 13.652 14.229 1.00 0.00 C ATOM 304 O LEU 87 -1.454 12.454 14.463 1.00 0.00 O ATOM 305 N LYS 88 -1.631 14.593 15.107 1.00 0.00 N ATOM 306 CA LYS 88 -2.210 14.238 16.394 1.00 0.00 C ATOM 307 C LYS 88 -3.652 13.798 16.157 1.00 0.00 C ATOM 308 O LYS 88 -4.137 12.845 16.768 1.00 0.00 O ATOM 309 N LYS 89 -4.325 14.492 15.249 1.00 0.00 N ATOM 310 CA LYS 89 -5.699 14.164 14.933 1.00 0.00 C ATOM 311 C LYS 89 -5.746 12.773 14.323 1.00 0.00 C ATOM 312 O LYS 89 -6.663 11.995 14.596 1.00 0.00 O ATOM 313 N GLU 90 -4.749 12.457 13.503 1.00 0.00 N ATOM 314 CA GLU 90 -4.698 11.155 12.846 1.00 0.00 C ATOM 315 C GLU 90 -4.450 10.065 13.868 1.00 0.00 C ATOM 316 O GLU 90 -5.099 9.028 13.841 1.00 0.00 O ATOM 317 N LEU 91 -3.500 10.305 14.763 1.00 0.00 N ATOM 318 CA LEU 91 -3.180 9.357 15.824 1.00 0.00 C ATOM 319 C LEU 91 -4.439 9.051 16.647 1.00 0.00 C ATOM 320 O LEU 91 -4.706 7.908 16.988 1.00 0.00 O ATOM 321 N ALA 92 -5.203 10.088 16.961 1.00 0.00 N ATOM 322 CA ALA 92 -6.416 9.939 17.747 1.00 0.00 C ATOM 323 C ALA 92 -7.425 9.059 17.025 1.00 0.00 C ATOM 324 O ALA 92 -8.006 8.149 17.618 1.00 0.00 O ATOM 325 N ASP 93 -7.610 9.325 15.734 1.00 0.00 N ATOM 326 CA ASP 93 -8.566 8.585 14.912 1.00 0.00 C ATOM 327 C ASP 93 -8.222 7.119 14.751 1.00 0.00 C ATOM 328 O ASP 93 -9.105 6.269 14.679 1.00 0.00 O ATOM 329 N ALA 94 -6.942 6.813 14.706 1.00 0.00 N ATOM 330 CA ALA 94 -6.544 5.437 14.534 1.00 0.00 C ATOM 331 C ALA 94 -6.297 4.688 15.843 1.00 0.00 C ATOM 332 O ALA 94 -6.551 3.484 15.926 1.00 0.00 O ATOM 333 N ILE 95 -5.852 5.385 16.885 1.00 0.00 N ATOM 334 CA ILE 95 -5.580 4.704 18.153 1.00 0.00 C ATOM 335 C ILE 95 -6.496 5.034 19.321 1.00 0.00 C ATOM 336 O ILE 95 -6.728 4.199 20.184 1.00 0.00 O ATOM 337 N THR 96 -7.029 6.240 19.360 1.00 0.00 N ATOM 338 CA THR 96 -7.869 6.620 20.479 1.00 0.00 C ATOM 339 C THR 96 -9.354 6.361 20.287 1.00 0.00 C ATOM 340 O THR 96 -10.011 5.831 21.182 1.00 0.00 O ATOM 341 N GLU 97 -9.872 6.723 19.119 1.00 0.00 N ATOM 342 CA GLU 97 -11.289 6.535 18.801 1.00 0.00 C ATOM 343 C GLU 97 -11.785 5.102 19.030 1.00 0.00 C ATOM 344 O GLU 97 -12.779 4.886 19.710 1.00 0.00 O ATOM 345 N ARG 98 -11.096 4.107 18.462 1.00 0.00 N ATOM 346 CA ARG 98 -11.483 2.702 18.614 1.00 0.00 C ATOM 347 C ARG 98 -11.518 2.270 20.074 1.00 0.00 C ATOM 348 O ARG 98 -12.365 1.469 20.476 1.00 0.00 O ATOM 349 N PHE 99 -10.577 2.790 20.857 1.00 0.00 N ATOM 350 CA PHE 99 -10.489 2.467 22.274 1.00 0.00 C ATOM 351 C PHE 99 -11.704 3.054 22.981 1.00 0.00 C ATOM 352 O PHE 99 -12.336 2.391 23.803 1.00 0.00 O ATOM 353 N LEU 100 -12.029 4.299 22.651 1.00 0.00 N ATOM 354 CA LEU 100 -13.153 4.955 23.272 1.00 0.00 C ATOM 355 C LEU 100 -14.473 4.276 22.955 1.00 0.00 C ATOM 356 O LEU 100 -15.247 3.998 23.864 1.00 0.00 O ATOM 357 N GLU 101 -14.733 4.018 21.678 1.00 0.00 N ATOM 358 CA GLU 101 -15.980 3.377 21.270 1.00 0.00 C ATOM 359 C GLU 101 -16.159 2.004 21.883 1.00 0.00 C ATOM 360 O GLU 101 -17.258 1.621 22.246 1.00 0.00 O ATOM 361 N GLU 102 -15.080 1.246 21.984 1.00 0.00 N ATOM 362 CA GLU 102 -15.198 -0.070 22.570 1.00 0.00 C ATOM 363 C GLU 102 -15.378 0.037 24.094 1.00 0.00 C ATOM 364 O GLU 102 -16.091 -0.778 24.700 1.00 0.00 O ATOM 365 N ALA 103 -14.709 1.022 24.701 1.00 0.00 N ATOM 366 CA ALA 103 -14.802 1.252 26.136 1.00 0.00 C ATOM 367 C ALA 103 -16.232 1.634 26.514 1.00 0.00 C ATOM 368 O ALA 103 -16.715 1.244 27.562 1.00 0.00 O ATOM 369 N LYS 104 -16.894 2.410 25.664 1.00 0.00 N ATOM 370 CA LYS 104 -18.259 2.842 25.936 1.00 0.00 C ATOM 371 C LYS 104 -19.154 1.629 25.809 1.00 0.00 C ATOM 372 O LYS 104 -19.983 1.348 26.670 1.00 0.00 O ATOM 373 N SER 105 -18.949 0.911 24.718 1.00 0.00 N ATOM 374 CA SER 105 -19.691 -0.293 24.418 1.00 0.00 C ATOM 375 C SER 105 -19.625 -1.294 25.565 1.00 0.00 C ATOM 376 O SER 105 -20.622 -1.916 25.890 1.00 0.00 O ATOM 377 N ILE 106 -18.460 -1.445 26.177 1.00 0.00 N ATOM 378 CA ILE 106 -18.292 -2.386 27.280 1.00 0.00 C ATOM 379 C ILE 106 -18.572 -1.758 28.649 1.00 0.00 C ATOM 380 O ILE 106 -18.422 -2.409 29.686 1.00 0.00 O ATOM 381 N GLY 107 -18.975 -0.489 28.649 1.00 0.00 N ATOM 382 CA GLY 107 -19.287 0.186 29.895 1.00 0.00 C ATOM 383 C GLY 107 -18.150 0.394 30.883 1.00 0.00 C ATOM 384 O GLY 107 -18.364 0.304 32.099 1.00 0.00 O ATOM 385 N LEU 108 -16.945 0.674 30.382 1.00 0.00 N ATOM 386 CA LEU 108 -15.794 0.929 31.253 1.00 0.00 C ATOM 387 C LEU 108 -15.883 2.360 31.772 1.00 0.00 C ATOM 388 O LEU 108 -16.553 3.209 31.178 1.00 0.00 O ATOM 389 N ASP 109 -15.189 2.616 32.872 1.00 0.00 N ATOM 390 CA ASP 109 -15.159 3.935 33.488 1.00 0.00 C ATOM 391 C ASP 109 -13.862 4.613 33.077 1.00 0.00 C ATOM 392 O ASP 109 -12.907 3.944 32.685 1.00 0.00 O ATOM 393 N ASP 110 -13.826 5.937 33.182 1.00 0.00 N ATOM 394 CA ASP 110 -12.622 6.682 32.851 1.00 0.00 C ATOM 395 C ASP 110 -11.474 6.221 33.740 1.00 0.00 C ATOM 396 O ASP 110 -10.345 6.088 33.285 1.00 0.00 O ATOM 397 N GLN 111 -11.763 5.969 35.010 1.00 0.00 N ATOM 398 CA GLN 111 -10.730 5.538 35.941 1.00 0.00 C ATOM 399 C GLN 111 -10.171 4.170 35.570 1.00 0.00 C ATOM 400 O GLN 111 -8.971 3.926 35.706 1.00 0.00 O ATOM 401 N THR 112 -11.047 3.284 35.103 1.00 0.00 N ATOM 402 CA THR 112 -10.647 1.928 34.722 1.00 0.00 C ATOM 403 C THR 112 -9.792 1.936 33.467 1.00 0.00 C ATOM 404 O THR 112 -8.916 1.096 33.309 1.00 0.00 O ATOM 405 N ALA 113 -10.053 2.882 32.570 1.00 0.00 N ATOM 406 CA ALA 113 -9.265 2.978 31.347 1.00 0.00 C ATOM 407 C ALA 113 -7.887 3.513 31.689 1.00 0.00 C ATOM 408 O ALA 113 -6.882 3.005 31.203 1.00 0.00 O ATOM 409 N ILE 114 -7.842 4.533 32.536 1.00 0.00 N ATOM 410 CA ILE 114 -6.567 5.099 32.937 1.00 0.00 C ATOM 411 C ILE 114 -5.707 4.062 33.642 1.00 0.00 C ATOM 412 O ILE 114 -4.500 4.008 33.421 1.00 0.00 O ATOM 413 N GLU 115 -6.325 3.234 34.481 1.00 0.00 N ATOM 414 CA GLU 115 -5.593 2.201 35.215 1.00 0.00 C ATOM 415 C GLU 115 -5.001 1.166 34.269 1.00 0.00 C ATOM 416 O GLU 115 -3.857 0.754 34.445 1.00 0.00 O ATOM 417 N LEU 116 -5.784 0.738 33.284 1.00 0.00 N ATOM 418 CA LEU 116 -5.308 -0.234 32.302 1.00 0.00 C ATOM 419 C LEU 116 -4.153 0.369 31.510 1.00 0.00 C ATOM 420 O LEU 116 -3.149 -0.288 31.254 1.00 0.00 O ATOM 421 N LEU 117 -4.305 1.627 31.120 1.00 0.00 N ATOM 422 CA LEU 117 -3.255 2.315 30.380 1.00 0.00 C ATOM 423 C LEU 117 -1.966 2.249 31.190 1.00 0.00 C ATOM 424 O LEU 117 -0.908 1.896 30.677 1.00 0.00 O ATOM 425 N ILE 118 -2.070 2.590 32.469 1.00 0.00 N ATOM 426 CA ILE 118 -0.910 2.574 33.344 1.00 0.00 C ATOM 427 C ILE 118 -0.320 1.182 33.512 1.00 0.00 C ATOM 428 O ILE 118 0.897 1.021 33.485 1.00 0.00 O ATOM 429 N LYS 119 -1.180 0.176 33.659 1.00 0.00 N ATOM 430 CA LYS 119 -0.711 -1.197 33.833 1.00 0.00 C ATOM 431 C LYS 119 0.101 -1.629 32.629 1.00 0.00 C ATOM 432 O LYS 119 1.216 -2.123 32.771 1.00 0.00 O ATOM 433 N ARG 120 -0.472 -1.460 31.443 1.00 0.00 N ATOM 434 CA ARG 120 0.219 -1.826 30.218 1.00 0.00 C ATOM 435 C ARG 120 1.520 -1.043 30.096 1.00 0.00 C ATOM 436 O ARG 120 2.549 -1.595 29.725 1.00 0.00 O ATOM 437 N SER 121 1.479 0.244 30.415 1.00 0.00 N ATOM 438 CA SER 121 2.684 1.053 30.320 1.00 0.00 C ATOM 439 C SER 121 3.788 0.519 31.217 1.00 0.00 C ATOM 440 O SER 121 4.963 0.645 30.883 1.00 0.00 O ATOM 441 N ARG 122 3.424 -0.059 32.359 1.00 0.00 N ATOM 442 CA ARG 122 4.436 -0.599 33.261 1.00 0.00 C ATOM 443 C ARG 122 5.039 -1.895 32.734 1.00 0.00 C ATOM 444 O ARG 122 6.229 -2.144 32.926 1.00 0.00 O ATOM 445 N ASN 123 4.228 -2.720 32.074 1.00 0.00 N ATOM 446 CA ASN 123 4.721 -3.986 31.534 1.00 0.00 C ATOM 447 C ASN 123 5.718 -3.692 30.424 1.00 0.00 C ATOM 448 O ASN 123 6.447 -4.572 29.966 1.00 0.00 O ATOM 449 N HIS 124 5.744 -2.437 29.995 1.00 0.00 N ATOM 450 CA HIS 124 6.659 -2.005 28.948 1.00 0.00 C ATOM 451 C HIS 124 7.722 -1.133 29.563 1.00 0.00 C ATOM 452 O HIS 124 7.502 0.002 29.959 1.00 0.00 O ATOM 453 N GLU 125 8.890 -1.743 29.630 1.00 0.00 N ATOM 454 CA GLU 125 10.051 -1.178 30.266 1.00 0.00 C ATOM 455 C GLU 125 10.399 -2.289 31.251 1.00 0.00 C ATOM 456 O GLU 125 11.338 -3.038 30.969 1.00 0.00 O END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 448 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 30.78 90.5 222 94.1 236 ARMSMC SECONDARY STRUCTURE . . 19.32 95.0 160 100.0 160 ARMSMC SURFACE . . . . . . . . 31.10 90.1 162 92.0 176 ARMSMC BURIED . . . . . . . . 29.89 91.7 60 100.0 60 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 102 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 97 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 71 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 77 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 25 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 83 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 68 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 58 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 65 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 18 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 38 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 33 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 30 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 32 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 19 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 19 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 14 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 18 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 1 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 4.62 (Number of atoms: 112) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 4.62 112 94.1 119 CRMSCA CRN = ALL/NP . . . . . 0.0413 CRMSCA SECONDARY STRUCTURE . . 4.61 80 100.0 80 CRMSCA SURFACE . . . . . . . . 4.85 82 92.1 89 CRMSCA BURIED . . . . . . . . 3.95 30 100.0 30 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 4.61 448 76.2 588 CRMSMC SECONDARY STRUCTURE . . 4.62 320 80.4 398 CRMSMC SURFACE . . . . . . . . 4.81 328 74.5 440 CRMSMC BURIED . . . . . . . . 4.02 120 81.1 148 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 0.00 0 0.0 477 CRMSSC RELIABLE SIDE CHAINS . 0.00 0 0.0 425 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 335 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 355 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 122 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 4.61 448 47.0 953 CRMSALL SECONDARY STRUCTURE . . 4.62 320 48.9 655 CRMSALL SURFACE . . . . . . . . 4.81 328 46.1 711 CRMSALL BURIED . . . . . . . . 4.02 120 49.6 242 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.100 1.000 0.500 112 94.1 119 ERRCA SECONDARY STRUCTURE . . 4.165 1.000 0.500 80 100.0 80 ERRCA SURFACE . . . . . . . . 4.281 1.000 0.500 82 92.1 89 ERRCA BURIED . . . . . . . . 3.605 1.000 0.500 30 100.0 30 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.072 1.000 0.500 448 76.2 588 ERRMC SECONDARY STRUCTURE . . 4.161 1.000 0.500 320 80.4 398 ERRMC SURFACE . . . . . . . . 4.239 1.000 0.500 328 74.5 440 ERRMC BURIED . . . . . . . . 3.614 1.000 0.500 120 81.1 148 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.000 0.000 0.000 0 0.0 477 ERRSC RELIABLE SIDE CHAINS . 0.000 0.000 0.000 0 0.0 425 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 335 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 355 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 122 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.072 1.000 0.500 448 47.0 953 ERRALL SECONDARY STRUCTURE . . 4.161 1.000 0.500 320 48.9 655 ERRALL SURFACE . . . . . . . . 4.239 1.000 0.500 328 46.1 711 ERRALL BURIED . . . . . . . . 3.614 1.000 0.500 120 49.6 242 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 7 19 34 78 112 112 119 DISTCA CA (P) 5.88 15.97 28.57 65.55 94.12 119 DISTCA CA (RMS) 0.70 1.32 1.96 3.18 4.62 DISTCA ALL (N) 28 78 141 310 446 448 953 DISTALL ALL (P) 2.94 8.18 14.80 32.53 46.80 953 DISTALL ALL (RMS) 0.71 1.31 1.94 3.11 4.56 DISTALL END of the results output