####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 75 ( 300), selected 75 , name T0586AL285_1-D1 # Molecule2: number of CA atoms 80 ( 640), selected 75 , name T0586-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0586AL285_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 75 10 - 84 1.20 1.20 LCS_AVERAGE: 93.75 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 75 10 - 84 1.20 1.20 LCS_AVERAGE: 93.75 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 74 11 - 84 0.90 1.22 LCS_AVERAGE: 92.43 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 75 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 10 A 10 70 75 75 3 3 3 4 4 5 8 14 33 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT D 11 D 11 74 75 75 20 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT K 12 K 12 74 75 75 21 39 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT P 13 P 13 74 75 75 21 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT I 14 I 14 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT Y 15 Y 15 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT S 16 S 16 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT Q 17 Q 17 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT I 18 I 18 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT S 19 S 19 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT D 20 D 20 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT W 21 W 21 74 75 75 21 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT M 22 M 22 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT K 23 K 23 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT K 24 K 24 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT Q 25 Q 25 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT M 26 M 26 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT I 27 I 27 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT T 28 T 28 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT G 29 G 29 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT E 30 E 30 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT W 31 W 31 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT K 32 K 32 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT G 33 G 33 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT E 34 E 34 74 75 75 45 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT D 35 D 35 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT K 36 K 36 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT L 37 L 37 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT P 38 P 38 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT S 39 S 39 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT V 40 V 40 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT R 41 R 41 74 75 75 36 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT E 42 E 42 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT M 43 M 43 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT G 44 G 44 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT V 45 V 45 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT K 46 K 46 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT L 47 L 47 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT A 48 A 48 74 75 75 40 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT V 49 V 49 74 75 75 37 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT N 50 N 50 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT P 51 P 51 74 75 75 45 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT N 52 N 52 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT T 53 T 53 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT V 54 V 54 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT S 55 S 55 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT R 56 R 56 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT A 57 A 57 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT Y 58 Y 58 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT Q 59 Q 59 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT E 60 E 60 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT L 61 L 61 74 75 75 37 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT E 62 E 62 74 75 75 43 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT R 63 R 63 74 75 75 14 54 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT A 64 A 64 74 75 75 14 54 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT G 65 G 65 74 75 75 16 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT Y 66 Y 66 74 75 75 16 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT I 67 I 67 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT Y 68 Y 68 74 75 75 36 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT A 69 A 69 74 75 75 31 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT K 70 K 70 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT R 71 R 71 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT G 72 G 72 74 75 75 20 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT M 73 M 73 74 75 75 20 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT G 74 G 74 74 75 75 20 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT S 75 S 75 74 75 75 39 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT F 76 F 76 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT V 77 V 77 74 75 75 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT T 78 T 78 74 75 75 31 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT S 79 S 79 74 75 75 3 39 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT D 80 D 80 74 75 75 3 5 66 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT K 81 K 81 74 75 75 4 5 5 6 6 22 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT A 82 A 82 74 75 75 4 5 21 55 71 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT L 83 L 83 74 75 75 42 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_GDT F 84 F 84 74 75 75 4 5 65 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 LCS_AVERAGE LCS_A: 93.31 ( 92.43 93.75 93.75 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 46 66 69 72 72 73 74 74 74 74 75 75 75 75 75 75 75 75 75 75 GDT PERCENT_AT 57.50 82.50 86.25 90.00 90.00 91.25 92.50 92.50 92.50 92.50 93.75 93.75 93.75 93.75 93.75 93.75 93.75 93.75 93.75 93.75 GDT RMS_LOCAL 0.34 0.48 0.54 0.65 0.65 0.76 0.90 0.90 0.90 0.90 1.20 1.20 1.20 1.20 1.20 1.20 1.20 1.20 1.20 1.20 GDT RMS_ALL_AT 1.22 1.22 1.22 1.22 1.22 1.22 1.22 1.22 1.22 1.22 1.20 1.20 1.20 1.20 1.20 1.20 1.20 1.20 1.20 1.20 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA A 10 A 10 7.178 1 0.709 0.709 8.912 17.619 14.095 LGA D 11 D 11 0.907 4 0.675 0.675 2.772 79.881 39.940 LGA K 12 K 12 1.174 5 0.092 0.092 1.174 83.690 37.196 LGA P 13 P 13 0.619 3 0.033 0.033 0.858 92.857 53.061 LGA I 14 I 14 0.349 4 0.025 0.025 0.424 100.000 50.000 LGA Y 15 Y 15 0.240 8 0.062 0.062 0.364 100.000 33.333 LGA S 16 S 16 0.427 2 0.047 0.047 0.427 100.000 66.667 LGA Q 17 Q 17 0.388 5 0.025 0.025 0.443 100.000 44.444 LGA I 18 I 18 0.477 4 0.025 0.025 0.477 100.000 50.000 LGA S 19 S 19 0.316 2 0.076 0.076 0.316 100.000 66.667 LGA D 20 D 20 0.342 4 0.014 0.014 0.392 100.000 50.000 LGA W 21 W 21 0.545 10 0.040 0.040 0.545 95.238 27.211 LGA M 22 M 22 0.544 4 0.008 0.008 0.544 95.238 47.619 LGA K 23 K 23 0.343 5 0.014 0.014 0.688 95.238 42.328 LGA K 24 K 24 0.641 5 0.013 0.013 0.645 90.476 40.212 LGA Q 25 Q 25 0.553 5 0.045 0.045 0.553 92.857 41.270 LGA M 26 M 26 0.379 4 0.081 0.081 0.400 100.000 50.000 LGA I 27 I 27 0.359 4 0.038 0.038 0.389 100.000 50.000 LGA T 28 T 28 0.214 3 0.094 0.094 0.566 97.619 55.782 LGA G 29 G 29 0.125 0 0.053 0.053 0.429 100.000 100.000 LGA E 30 E 30 0.312 5 0.075 0.075 0.426 100.000 44.444 LGA W 31 W 31 0.562 10 0.031 0.031 0.562 97.619 27.891 LGA K 32 K 32 0.321 5 0.000 0.000 0.628 97.619 43.386 LGA G 33 G 33 0.500 0 0.048 0.048 0.587 95.238 95.238 LGA E 34 E 34 0.640 5 0.027 0.027 0.640 90.476 40.212 LGA D 35 D 35 0.358 4 0.012 0.012 0.392 100.000 50.000 LGA K 36 K 36 0.207 5 0.062 0.062 0.905 95.238 42.328 LGA L 37 L 37 0.557 4 0.088 0.088 0.594 92.857 46.429 LGA P 38 P 38 0.564 3 0.032 0.032 0.564 95.238 54.422 LGA S 39 S 39 0.486 2 0.028 0.028 0.500 100.000 66.667 LGA V 40 V 40 0.170 3 0.065 0.065 0.363 100.000 57.143 LGA R 41 R 41 0.654 7 0.062 0.062 0.654 95.238 34.632 LGA E 42 E 42 0.599 5 0.020 0.020 0.599 95.238 42.328 LGA M 43 M 43 0.277 4 0.059 0.059 0.408 100.000 50.000 LGA G 44 G 44 0.224 0 0.020 0.020 0.350 100.000 100.000 LGA V 45 V 45 0.336 3 0.020 0.020 0.454 100.000 57.143 LGA K 46 K 46 0.231 5 0.048 0.048 0.231 100.000 44.444 LGA L 47 L 47 0.140 4 0.051 0.051 0.570 97.619 48.810 LGA A 48 A 48 0.627 1 0.059 0.059 0.871 92.857 74.286 LGA V 49 V 49 0.788 3 0.048 0.048 0.788 90.476 51.701 LGA N 50 N 50 0.461 4 0.015 0.015 0.595 95.238 47.619 LGA P 51 P 51 0.530 3 0.055 0.055 0.530 97.619 55.782 LGA N 52 N 52 0.475 4 0.031 0.031 0.520 97.619 48.810 LGA T 53 T 53 0.434 3 0.028 0.028 0.466 100.000 57.143 LGA V 54 V 54 0.384 3 0.046 0.046 0.520 97.619 55.782 LGA S 55 S 55 0.400 2 0.022 0.022 0.449 100.000 66.667 LGA R 56 R 56 0.239 7 0.087 0.087 0.431 100.000 36.364 LGA A 57 A 57 0.271 1 0.052 0.052 0.288 100.000 80.000 LGA Y 58 Y 58 0.237 8 0.024 0.024 0.315 100.000 33.333 LGA Q 59 Q 59 0.188 5 0.076 0.076 0.299 100.000 44.444 LGA E 60 E 60 0.123 5 0.056 0.056 0.243 100.000 44.444 LGA L 61 L 61 0.534 4 0.015 0.015 0.672 92.857 46.429 LGA E 62 E 62 0.624 5 0.037 0.037 1.001 90.595 40.265 LGA R 63 R 63 1.194 7 0.035 0.035 1.560 81.548 29.654 LGA A 64 A 64 1.391 1 0.032 0.032 1.575 79.286 63.429 LGA G 65 G 65 0.908 0 0.116 0.116 1.160 85.952 85.952 LGA Y 66 Y 66 0.766 8 0.040 0.040 0.766 92.857 30.952 LGA I 67 I 67 0.340 4 0.037 0.037 0.426 100.000 50.000 LGA Y 68 Y 68 0.539 8 0.038 0.038 0.597 95.238 31.746 LGA A 69 A 69 0.654 1 0.048 0.048 0.843 90.476 72.381 LGA K 70 K 70 0.379 5 0.077 0.077 0.558 97.619 43.386 LGA R 71 R 71 0.282 7 0.013 0.013 0.546 97.619 35.498 LGA G 72 G 72 1.105 0 0.235 0.235 1.105 88.214 88.214 LGA M 73 M 73 0.935 4 0.091 0.091 0.995 90.476 45.238 LGA G 74 G 74 0.824 0 0.048 0.048 0.856 92.857 92.857 LGA S 75 S 75 0.528 2 0.057 0.057 0.641 95.238 63.492 LGA F 76 F 76 0.190 7 0.018 0.018 0.459 100.000 36.364 LGA V 77 V 77 0.274 3 0.095 0.095 0.915 95.238 54.422 LGA T 78 T 78 0.634 3 0.072 0.072 1.406 90.595 51.769 LGA S 79 S 79 1.574 2 0.574 0.574 1.574 81.548 54.365 LGA D 80 D 80 1.876 4 0.201 0.201 2.496 66.786 33.393 LGA K 81 K 81 4.056 5 0.042 0.042 4.056 45.119 20.053 LGA A 82 A 82 3.335 1 0.032 0.032 3.335 57.381 45.905 LGA L 83 L 83 0.692 4 0.062 0.062 1.261 92.976 46.488 LGA F 84 F 84 2.043 7 0.023 0.023 2.439 68.929 25.065 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 75 300 300 100.00 597 300 50.25 80 SUMMARY(RMSD_GDC): 1.197 1.141 1.141 86.674 47.363 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 75 80 4.0 74 0.90 89.688 91.387 7.430 LGA_LOCAL RMSD: 0.896 Number of atoms: 74 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 1.216 Number of assigned atoms: 75 Std_ASGN_ATOMS RMSD: 1.197 Standard rmsd on all 75 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.095816 * X + -0.994903 * Y + -0.031428 * Z + 64.821335 Y_new = 0.057733 * X + 0.037075 * Y + -0.997643 * Z + 27.311600 Z_new = 0.993723 * X + 0.093775 * Y + 0.060991 * Z + -14.884846 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.542285 -1.458697 0.994145 [DEG: 31.0706 -83.5772 56.9603 ] ZXZ: -0.031492 1.509768 1.476707 [DEG: -1.8044 86.5033 84.6091 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0586AL285_1-D1 REMARK 2: T0586-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0586AL285_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 75 80 4.0 74 0.90 91.387 1.20 REMARK ---------------------------------------------------------- MOLECULE T0586AL285_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK Aligment from pdb entry: 3by6A ATOM 1 N ALA 10 -6.046 1.344 -3.755 1.00 0.00 N ATOM 2 CA ALA 10 -5.181 1.642 -4.875 1.00 0.00 C ATOM 3 C ALA 10 -3.860 2.219 -4.364 1.00 0.00 C ATOM 4 O ALA 10 -3.730 2.557 -3.183 1.00 0.00 O ATOM 5 N ASP 11 -2.885 2.317 -5.270 1.00 0.00 N ATOM 6 CA ASP 11 -1.655 3.094 -5.022 1.00 0.00 C ATOM 7 C ASP 11 -2.035 4.465 -4.424 1.00 0.00 C ATOM 8 O ASP 11 -3.040 5.074 -4.816 1.00 0.00 O ATOM 9 N LYS 12 -1.283 4.913 -3.419 1.00 0.00 N ATOM 10 CA LYS 12 -1.451 6.268 -2.934 1.00 0.00 C ATOM 11 C LYS 12 -0.815 7.178 -4.000 1.00 0.00 C ATOM 12 O LYS 12 0.311 6.924 -4.406 1.00 0.00 O ATOM 13 N PRO 13 -1.516 8.236 -4.447 1.00 0.00 N ATOM 14 CA PRO 13 -0.899 8.971 -5.589 1.00 0.00 C ATOM 15 C PRO 13 0.496 9.452 -5.197 1.00 0.00 C ATOM 16 O PRO 13 0.735 9.791 -4.036 1.00 0.00 O ATOM 17 N ILE 14 1.423 9.413 -6.141 1.00 0.00 N ATOM 18 CA ILE 14 2.802 9.772 -5.849 1.00 0.00 C ATOM 19 C ILE 14 2.896 11.177 -5.247 1.00 0.00 C ATOM 20 O ILE 14 3.719 11.412 -4.380 1.00 0.00 O ATOM 21 N TYR 15 2.034 12.094 -5.680 1.00 0.00 N ATOM 22 CA TYR 15 2.135 13.482 -5.218 1.00 0.00 C ATOM 23 C TYR 15 1.737 13.592 -3.752 1.00 0.00 C ATOM 24 O TYR 15 2.192 14.512 -3.033 1.00 0.00 O ATOM 25 N SER 16 0.860 12.674 -3.321 1.00 0.00 N ATOM 26 CA SER 16 0.450 12.629 -1.904 1.00 0.00 C ATOM 27 C SER 16 1.486 11.921 -1.048 1.00 0.00 C ATOM 28 O SER 16 1.633 12.239 0.110 1.00 0.00 O ATOM 29 N GLN 17 2.233 11.000 -1.631 1.00 0.00 N ATOM 30 CA GLN 17 3.379 10.390 -0.941 1.00 0.00 C ATOM 31 C GLN 17 4.488 11.421 -0.630 1.00 0.00 C ATOM 32 O GLN 17 5.173 11.374 0.410 1.00 0.00 O ATOM 33 N ILE 18 4.658 12.363 -1.548 1.00 0.00 N ATOM 34 CA ILE 18 5.665 13.413 -1.372 1.00 0.00 C ATOM 35 C ILE 18 5.155 14.437 -0.371 1.00 0.00 C ATOM 36 O ILE 18 5.901 14.906 0.466 1.00 0.00 O ATOM 37 N SER 19 3.876 14.771 -0.444 1.00 0.00 N ATOM 38 CA SER 19 3.250 15.614 0.597 1.00 0.00 C ATOM 39 C SER 19 3.512 14.962 1.950 1.00 0.00 C ATOM 40 O SER 19 4.010 15.619 2.878 1.00 0.00 O ATOM 41 N ASP 20 3.233 13.658 2.052 1.00 0.00 N ATOM 42 CA ASP 20 3.441 12.939 3.314 1.00 0.00 C ATOM 43 C ASP 20 4.872 13.069 3.844 1.00 0.00 C ATOM 44 O ASP 20 5.088 13.342 5.022 1.00 0.00 O ATOM 45 N TRP 21 5.834 12.837 2.955 1.00 0.00 N ATOM 46 CA TRP 21 7.268 12.924 3.259 1.00 0.00 C ATOM 47 C TRP 21 7.680 14.288 3.767 1.00 0.00 C ATOM 48 O TRP 21 8.285 14.404 4.827 1.00 0.00 O ATOM 49 N MET 22 7.336 15.334 3.039 1.00 0.00 N ATOM 50 CA MET 22 7.709 16.682 3.470 1.00 0.00 C ATOM 51 C MET 22 7.049 17.043 4.786 1.00 0.00 C ATOM 52 O MET 22 7.678 17.625 5.667 1.00 0.00 O ATOM 53 N LYS 23 5.787 16.653 4.920 1.00 0.00 N ATOM 54 CA LYS 23 4.999 16.934 6.124 1.00 0.00 C ATOM 55 C LYS 23 5.601 16.284 7.341 1.00 0.00 C ATOM 56 O LYS 23 5.622 16.891 8.408 1.00 0.00 O ATOM 57 N LYS 24 6.081 15.041 7.177 1.00 0.00 N ATOM 58 CA LYS 24 6.647 14.282 8.279 1.00 0.00 C ATOM 59 C LYS 24 8.028 14.794 8.629 1.00 0.00 C ATOM 60 O LYS 24 8.405 14.900 9.802 1.00 0.00 O ATOM 61 N GLN 25 8.784 15.130 7.605 1.00 0.00 N ATOM 62 CA GLN 25 10.025 15.800 7.814 1.00 0.00 C ATOM 63 C GLN 25 9.900 17.095 8.577 1.00 0.00 C ATOM 64 O GLN 25 10.767 17.386 9.397 1.00 0.00 O ATOM 65 N MET 26 8.855 17.885 8.301 1.00 0.00 N ATOM 66 CA MET 26 8.552 19.062 9.142 1.00 0.00 C ATOM 67 C MET 26 8.207 18.671 10.581 1.00 0.00 C ATOM 68 O MET 26 8.757 19.241 11.522 1.00 0.00 O ATOM 69 N ILE 27 7.304 17.702 10.744 1.00 0.00 N ATOM 70 CA ILE 27 6.913 17.199 12.073 1.00 0.00 C ATOM 71 C ILE 27 8.082 16.648 12.902 1.00 0.00 C ATOM 72 O ILE 27 8.094 16.786 14.120 1.00 0.00 O ATOM 73 N THR 28 9.060 16.016 12.259 1.00 0.00 N ATOM 74 CA THR 28 10.200 15.446 12.969 1.00 0.00 C ATOM 75 C THR 28 11.463 16.337 12.998 1.00 0.00 C ATOM 76 O THR 28 12.524 15.878 13.427 1.00 0.00 O ATOM 77 N GLY 29 11.328 17.592 12.547 1.00 0.00 N ATOM 78 CA GLY 29 12.388 18.626 12.478 1.00 0.00 C ATOM 79 C GLY 29 13.565 18.278 11.613 1.00 0.00 C ATOM 80 O GLY 29 14.615 18.838 11.783 1.00 0.00 O ATOM 81 N GLU 30 13.402 17.387 10.651 1.00 0.00 N ATOM 82 CA GLU 30 14.366 17.336 9.575 1.00 0.00 C ATOM 83 C GLU 30 14.275 18.710 8.870 1.00 0.00 C ATOM 84 O GLU 30 15.320 19.380 8.654 1.00 0.00 O ATOM 85 N TRP 31 13.037 19.154 8.589 1.00 0.00 N ATOM 86 CA TRP 31 12.794 20.493 8.023 1.00 0.00 C ATOM 87 C TRP 31 12.207 21.420 9.080 1.00 0.00 C ATOM 88 O TRP 31 11.184 21.127 9.669 1.00 0.00 O ATOM 89 N LYS 32 12.874 22.549 9.302 1.00 0.00 N ATOM 90 CA LYS 32 12.476 23.518 10.314 1.00 0.00 C ATOM 91 C LYS 32 11.653 24.636 9.695 1.00 0.00 C ATOM 92 O LYS 32 11.601 24.787 8.472 1.00 0.00 O ATOM 93 N GLY 33 11.005 25.394 10.568 1.00 0.00 N ATOM 94 CA GLY 33 10.257 26.569 10.198 1.00 0.00 C ATOM 95 C GLY 33 11.133 27.551 9.413 1.00 0.00 C ATOM 96 O GLY 33 12.233 27.928 9.826 1.00 0.00 O ATOM 97 N GLU 34 10.615 27.945 8.259 1.00 0.00 N ATOM 98 CA GLU 34 11.207 28.953 7.389 1.00 0.00 C ATOM 99 C GLU 34 12.397 28.461 6.599 1.00 0.00 C ATOM 100 O GLU 34 12.944 29.226 5.836 1.00 0.00 O ATOM 101 N ASP 35 12.737 27.181 6.713 1.00 0.00 N ATOM 102 CA ASP 35 13.770 26.593 5.881 1.00 0.00 C ATOM 103 C ASP 35 13.360 26.728 4.403 1.00 0.00 C ATOM 104 O ASP 35 12.192 26.525 4.058 1.00 0.00 O ATOM 105 N LYS 36 14.326 26.998 3.538 1.00 0.00 N ATOM 106 CA LYS 36 14.089 26.988 2.106 1.00 0.00 C ATOM 107 C LYS 36 13.928 25.550 1.701 1.00 0.00 C ATOM 108 O LYS 36 14.668 24.699 2.124 1.00 0.00 O ATOM 109 N LEU 37 12.928 25.287 0.889 1.00 0.00 N ATOM 110 CA LEU 37 12.660 23.993 0.378 1.00 0.00 C ATOM 111 C LEU 37 13.263 24.014 -1.020 1.00 0.00 C ATOM 112 O LEU 37 13.395 25.080 -1.605 1.00 0.00 O ATOM 113 N PRO 38 13.701 22.861 -1.549 1.00 0.00 N ATOM 114 CA PRO 38 14.198 22.939 -2.928 1.00 0.00 C ATOM 115 C PRO 38 13.096 23.341 -3.917 1.00 0.00 C ATOM 116 O PRO 38 11.916 23.282 -3.585 1.00 0.00 O ATOM 117 N SER 39 13.482 23.681 -5.141 1.00 0.00 N ATOM 118 CA SER 39 12.537 24.035 -6.163 1.00 0.00 C ATOM 119 C SER 39 11.812 22.787 -6.649 1.00 0.00 C ATOM 120 O SER 39 12.223 21.650 -6.337 1.00 0.00 O ATOM 121 N VAL 40 10.751 22.978 -7.428 1.00 0.00 N ATOM 122 CA VAL 40 10.066 21.866 -8.071 1.00 0.00 C ATOM 123 C VAL 40 11.088 21.109 -8.894 1.00 0.00 C ATOM 124 O VAL 40 11.141 19.888 -8.815 1.00 0.00 O ATOM 125 N ARG 41 11.894 21.822 -9.704 1.00 0.00 N ATOM 126 CA ARG 41 12.964 21.180 -10.488 1.00 0.00 C ATOM 127 C ARG 41 13.918 20.279 -9.628 1.00 0.00 C ATOM 128 O ARG 41 14.117 19.106 -9.933 1.00 0.00 O ATOM 129 N GLU 42 14.536 20.886 -8.605 1.00 0.00 N ATOM 130 CA GLU 42 15.458 20.210 -7.724 1.00 0.00 C ATOM 131 C GLU 42 14.816 18.996 -7.058 1.00 0.00 C ATOM 132 O GLU 42 15.403 17.902 -7.023 1.00 0.00 O ATOM 133 N MET 43 13.616 19.162 -6.525 1.00 0.00 N ATOM 134 CA MET 43 12.879 18.022 -5.997 1.00 0.00 C ATOM 135 C MET 43 12.624 16.951 -7.062 1.00 0.00 C ATOM 136 O MET 43 12.892 15.778 -6.833 1.00 0.00 O ATOM 137 N GLY 44 12.122 17.325 -8.219 1.00 0.00 N ATOM 138 CA GLY 44 11.863 16.356 -9.284 1.00 0.00 C ATOM 139 C GLY 44 13.159 15.588 -9.614 1.00 0.00 C ATOM 140 O GLY 44 13.123 14.392 -9.864 1.00 0.00 O ATOM 141 N VAL 45 14.294 16.284 -9.554 1.00 0.00 N ATOM 142 CA VAL 45 15.598 15.763 -9.985 1.00 0.00 C ATOM 143 C VAL 45 16.162 14.837 -8.907 1.00 0.00 C ATOM 144 O VAL 45 16.610 13.749 -9.229 1.00 0.00 O ATOM 145 N LYS 46 16.084 15.262 -7.639 1.00 0.00 N ATOM 146 CA LYS 46 16.488 14.472 -6.477 1.00 0.00 C ATOM 147 C LYS 46 15.603 13.248 -6.180 1.00 0.00 C ATOM 148 O LYS 46 16.085 12.207 -5.722 1.00 0.00 O ATOM 149 N LEU 47 14.303 13.364 -6.393 1.00 0.00 N ATOM 150 CA LEU 47 13.417 12.273 -6.075 1.00 0.00 C ATOM 151 C LEU 47 13.013 11.441 -7.269 1.00 0.00 C ATOM 152 O LEU 47 12.255 10.511 -7.116 1.00 0.00 O ATOM 153 N ALA 48 13.512 11.743 -8.446 1.00 0.00 N ATOM 154 CA ALA 48 13.021 11.125 -9.692 1.00 0.00 C ATOM 155 C ALA 48 11.491 11.064 -9.784 1.00 0.00 C ATOM 156 O ALA 48 10.907 9.976 -9.938 1.00 0.00 O ATOM 157 N VAL 49 10.850 12.233 -9.688 1.00 0.00 N ATOM 158 CA VAL 49 9.395 12.389 -9.790 1.00 0.00 C ATOM 159 C VAL 49 9.174 13.414 -10.890 1.00 0.00 C ATOM 160 O VAL 49 9.934 14.371 -10.951 1.00 0.00 O ATOM 161 N ASN 50 8.197 13.208 -11.780 1.00 0.00 N ATOM 162 CA ASN 50 7.799 14.217 -12.800 1.00 0.00 C ATOM 163 C ASN 50 7.519 15.578 -12.129 1.00 0.00 C ATOM 164 O ASN 50 6.793 15.634 -11.127 1.00 0.00 O ATOM 165 N PRO 51 8.104 16.682 -12.650 1.00 0.00 N ATOM 166 CA PRO 51 7.888 18.009 -12.075 1.00 0.00 C ATOM 167 C PRO 51 6.445 18.421 -11.851 1.00 0.00 C ATOM 168 O PRO 51 6.178 19.106 -10.883 1.00 0.00 O ATOM 169 N ASN 52 5.546 18.028 -12.751 1.00 0.00 N ATOM 170 CA ASN 52 4.125 18.232 -12.596 1.00 0.00 C ATOM 171 C ASN 52 3.583 17.612 -11.305 1.00 0.00 C ATOM 172 O ASN 52 2.773 18.218 -10.606 1.00 0.00 O ATOM 173 N THR 53 4.007 16.385 -11.012 1.00 0.00 N ATOM 174 CA THR 53 3.642 15.724 -9.771 1.00 0.00 C ATOM 175 C THR 53 4.244 16.492 -8.614 1.00 0.00 C ATOM 176 O THR 53 3.570 16.716 -7.631 1.00 0.00 O ATOM 177 N VAL 54 5.504 16.907 -8.705 1.00 0.00 N ATOM 178 CA VAL 54 6.095 17.745 -7.605 1.00 0.00 C ATOM 179 C VAL 54 5.320 19.073 -7.392 1.00 0.00 C ATOM 180 O VAL 54 5.144 19.525 -6.268 1.00 0.00 O ATOM 181 N SER 55 4.864 19.681 -8.473 1.00 0.00 N ATOM 182 CA SER 55 4.156 20.947 -8.424 1.00 0.00 C ATOM 183 C SER 55 2.791 20.718 -7.801 1.00 0.00 C ATOM 184 O SER 55 2.302 21.510 -6.994 1.00 0.00 O ATOM 185 N ARG 56 2.188 19.596 -8.166 1.00 0.00 N ATOM 186 CA ARG 56 0.954 19.133 -7.523 1.00 0.00 C ATOM 187 C ARG 56 1.155 18.868 -6.024 1.00 0.00 C ATOM 188 O ARG 56 0.425 19.379 -5.208 1.00 0.00 O ATOM 189 N ALA 57 2.173 18.102 -5.649 1.00 0.00 N ATOM 190 CA ALA 57 2.592 18.089 -4.250 1.00 0.00 C ATOM 191 C ALA 57 2.687 19.448 -3.548 1.00 0.00 C ATOM 192 O ALA 57 2.122 19.641 -2.482 1.00 0.00 O ATOM 193 N TYR 58 3.429 20.390 -4.122 1.00 0.00 N ATOM 194 CA TYR 58 3.761 21.667 -3.493 1.00 0.00 C ATOM 195 C TYR 58 2.491 22.540 -3.320 1.00 0.00 C ATOM 196 O TYR 58 2.294 23.247 -2.301 1.00 0.00 O ATOM 197 N GLN 59 1.634 22.461 -4.322 1.00 0.00 N ATOM 198 CA GLN 59 0.310 23.053 -4.249 1.00 0.00 C ATOM 199 C GLN 59 -0.514 22.494 -3.097 1.00 0.00 C ATOM 200 O GLN 59 -1.004 23.243 -2.270 1.00 0.00 O ATOM 201 N GLU 60 -0.644 21.180 -3.028 1.00 0.00 N ATOM 202 CA GLU 60 -1.289 20.548 -1.874 1.00 0.00 C ATOM 203 C GLU 60 -0.693 20.993 -0.523 1.00 0.00 C ATOM 204 O GLU 60 -1.430 21.490 0.342 1.00 0.00 O ATOM 205 N LEU 61 0.625 20.848 -0.364 1.00 0.00 N ATOM 206 CA LEU 61 1.339 21.307 0.836 1.00 0.00 C ATOM 207 C LEU 61 1.063 22.768 1.175 1.00 0.00 C ATOM 208 O LEU 61 0.974 23.152 2.361 1.00 0.00 O ATOM 209 N GLU 62 0.937 23.609 0.157 1.00 0.00 N ATOM 210 CA GLU 62 0.633 25.000 0.425 1.00 0.00 C ATOM 211 C GLU 62 -0.818 25.208 0.932 1.00 0.00 C ATOM 212 O GLU 62 -1.037 25.953 1.893 1.00 0.00 O ATOM 213 N ARG 63 -1.769 24.511 0.297 1.00 0.00 N ATOM 214 CA ARG 63 -3.179 24.442 0.714 1.00 0.00 C ATOM 215 C ARG 63 -3.310 24.007 2.171 1.00 0.00 C ATOM 216 O ARG 63 -4.099 24.552 2.931 1.00 0.00 O ATOM 217 N ALA 64 -2.525 23.025 2.577 1.00 0.00 N ATOM 218 CA ALA 64 -2.494 22.583 3.973 1.00 0.00 C ATOM 219 C ALA 64 -1.640 23.433 4.898 1.00 0.00 C ATOM 220 O ALA 64 -1.513 23.092 6.078 1.00 0.00 O ATOM 221 N GLY 65 -1.024 24.493 4.342 1.00 0.00 N ATOM 222 CA GLY 65 -0.182 25.485 5.034 1.00 0.00 C ATOM 223 C GLY 65 1.112 24.907 5.577 1.00 0.00 C ATOM 224 O GLY 65 1.595 25.312 6.638 1.00 0.00 O ATOM 225 N TYR 66 1.685 23.950 4.864 1.00 0.00 N ATOM 226 CA TYR 66 2.941 23.369 5.305 1.00 0.00 C ATOM 227 C TYR 66 4.106 24.154 4.675 1.00 0.00 C ATOM 228 O TYR 66 5.225 24.227 5.212 1.00 0.00 O ATOM 229 N ILE 67 3.837 24.721 3.513 1.00 0.00 N ATOM 230 CA ILE 67 4.816 25.540 2.831 1.00 0.00 C ATOM 231 C ILE 67 4.184 26.807 2.278 1.00 0.00 C ATOM 232 O ILE 67 2.960 26.927 2.202 1.00 0.00 O ATOM 233 N TYR 68 5.052 27.761 1.938 1.00 0.00 N ATOM 234 CA TYR 68 4.665 28.978 1.233 1.00 0.00 C ATOM 235 C TYR 68 5.733 29.442 0.246 1.00 0.00 C ATOM 236 O TYR 68 6.908 29.190 0.413 1.00 0.00 O ATOM 237 N ALA 69 5.297 30.175 -0.761 1.00 0.00 N ATOM 238 CA ALA 69 6.203 30.763 -1.725 1.00 0.00 C ATOM 239 C ALA 69 6.346 32.274 -1.536 1.00 0.00 C ATOM 240 O ALA 69 5.377 32.980 -1.253 1.00 0.00 O ATOM 241 N LYS 70 7.573 32.759 -1.674 1.00 0.00 N ATOM 242 CA LYS 70 7.862 34.188 -1.642 1.00 0.00 C ATOM 243 C LYS 70 8.332 34.539 -3.052 1.00 0.00 C ATOM 244 O LYS 70 9.287 33.949 -3.540 1.00 0.00 O ATOM 245 N ARG 71 7.624 35.463 -3.721 1.00 0.00 N ATOM 246 CA ARG 71 7.943 35.916 -5.075 1.00 0.00 C ATOM 247 C ARG 71 9.417 36.264 -5.223 1.00 0.00 C ATOM 248 O ARG 71 9.925 37.057 -4.458 1.00 0.00 O ATOM 249 N GLY 72 10.102 35.614 -6.157 1.00 0.00 N ATOM 250 CA GLY 72 11.526 35.854 -6.349 1.00 0.00 C ATOM 251 C GLY 72 12.528 35.145 -5.428 1.00 0.00 C ATOM 252 O GLY 72 13.727 35.132 -5.697 1.00 0.00 O ATOM 253 N MET 73 12.023 34.535 -4.368 1.00 0.00 N ATOM 254 CA MET 73 12.846 33.981 -3.293 1.00 0.00 C ATOM 255 C MET 73 12.703 32.462 -3.176 1.00 0.00 C ATOM 256 O MET 73 13.572 31.814 -2.579 1.00 0.00 O ATOM 257 N GLY 74 11.628 31.895 -3.721 1.00 0.00 N ATOM 258 CA GLY 74 11.387 30.454 -3.645 1.00 0.00 C ATOM 259 C GLY 74 10.338 29.961 -2.626 1.00 0.00 C ATOM 260 O GLY 74 9.460 30.703 -2.164 1.00 0.00 O ATOM 261 N SER 75 10.490 28.702 -2.236 1.00 0.00 N ATOM 262 CA SER 75 9.516 27.979 -1.435 1.00 0.00 C ATOM 263 C SER 75 10.152 27.612 -0.117 1.00 0.00 C ATOM 264 O SER 75 11.291 27.148 -0.106 1.00 0.00 O ATOM 265 N PHE 76 9.394 27.846 0.961 1.00 0.00 N ATOM 266 CA PHE 76 9.826 27.803 2.338 1.00 0.00 C ATOM 267 C PHE 76 8.853 26.969 3.181 1.00 0.00 C ATOM 268 O PHE 76 7.652 26.897 2.902 1.00 0.00 O ATOM 269 N VAL 77 9.395 26.293 4.182 1.00 0.00 N ATOM 270 CA VAL 77 8.564 25.658 5.208 1.00 0.00 C ATOM 271 C VAL 77 7.865 26.822 5.904 1.00 0.00 C ATOM 272 O VAL 77 8.447 27.853 6.098 1.00 0.00 O ATOM 273 N THR 78 6.579 26.682 6.150 1.00 0.00 N ATOM 274 CA THR 78 5.809 27.609 6.969 1.00 0.00 C ATOM 275 C THR 78 6.535 27.985 8.269 1.00 0.00 C ATOM 276 O THR 78 7.434 27.285 8.734 1.00 0.00 O ATOM 277 N SER 79 6.139 29.124 8.823 1.00 0.00 N ATOM 278 CA SER 79 6.495 29.502 10.177 1.00 0.00 C ATOM 279 C SER 79 5.529 28.901 11.161 1.00 0.00 C ATOM 280 O SER 79 5.829 28.818 12.345 1.00 0.00 O ATOM 281 N ASP 80 4.359 28.481 10.660 1.00 0.00 N ATOM 282 CA ASP 80 3.295 27.889 11.483 1.00 0.00 C ATOM 283 C ASP 80 3.510 26.369 11.608 1.00 0.00 C ATOM 284 O ASP 80 2.648 25.543 11.241 1.00 0.00 O ATOM 285 N LYS 81 4.658 26.033 12.156 1.00 0.00 N ATOM 286 CA LYS 81 5.176 24.686 12.195 1.00 0.00 C ATOM 287 C LYS 81 4.583 23.841 13.380 1.00 0.00 C ATOM 288 O LYS 81 4.378 22.617 13.280 1.00 0.00 O ATOM 289 N ALA 82 4.244 24.495 14.484 1.00 0.00 N ATOM 290 CA ALA 82 3.575 23.821 15.591 1.00 0.00 C ATOM 291 C ALA 82 2.224 23.275 15.132 1.00 0.00 C ATOM 292 O ALA 82 1.808 22.212 15.567 1.00 0.00 O ATOM 293 N LEU 83 1.536 23.993 14.243 1.00 0.00 N ATOM 294 CA LEU 83 0.263 23.502 13.727 1.00 0.00 C ATOM 295 C LEU 83 0.428 22.240 12.864 1.00 0.00 C ATOM 296 O LEU 83 -0.433 21.346 12.896 1.00 0.00 O ATOM 297 N PHE 84 1.544 22.142 12.139 1.00 0.00 N ATOM 298 CA PHE 84 1.851 20.953 11.319 1.00 0.00 C ATOM 299 C PHE 84 2.122 19.692 12.186 1.00 0.00 C ATOM 300 O PHE 84 1.700 18.590 11.846 1.00 0.00 O END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 300 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 25.74 94.6 148 93.7 158 ARMSMC SECONDARY STRUCTURE . . 9.12 100.0 86 100.0 86 ARMSMC SURFACE . . . . . . . . 30.56 92.0 100 90.9 110 ARMSMC BURIED . . . . . . . . 9.85 100.0 48 100.0 48 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 68 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 63 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 39 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 47 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 21 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 53 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 45 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 30 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 39 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 14 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 24 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 21 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 16 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 19 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 5 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 12 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 12 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 7 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 12 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 1.20 (Number of atoms: 75) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 1.20 75 93.8 80 CRMSCA CRN = ALL/NP . . . . . 0.0160 CRMSCA SECONDARY STRUCTURE . . 0.50 43 100.0 43 CRMSCA SURFACE . . . . . . . . 1.42 51 91.1 56 CRMSCA BURIED . . . . . . . . 0.46 24 100.0 24 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 1.14 300 76.1 394 CRMSMC SECONDARY STRUCTURE . . 0.51 172 80.8 213 CRMSMC SURFACE . . . . . . . . 1.34 204 73.9 276 CRMSMC BURIED . . . . . . . . 0.48 96 81.4 118 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 0.00 0 0.0 320 CRMSSC RELIABLE SIDE CHAINS . 0.00 0 0.0 286 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 184 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 224 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 96 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 1.14 300 46.9 640 CRMSALL SECONDARY STRUCTURE . . 0.51 172 48.3 356 CRMSALL SURFACE . . . . . . . . 1.34 204 45.5 448 CRMSALL BURIED . . . . . . . . 0.48 96 50.0 192 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.741 1.000 0.500 75 93.8 80 ERRCA SECONDARY STRUCTURE . . 0.453 1.000 0.500 43 100.0 43 ERRCA SURFACE . . . . . . . . 0.888 1.000 0.500 51 91.1 56 ERRCA BURIED . . . . . . . . 0.427 1.000 0.500 24 100.0 24 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.731 1.000 0.500 300 76.1 394 ERRMC SECONDARY STRUCTURE . . 0.459 1.000 0.500 172 80.8 213 ERRMC SURFACE . . . . . . . . 0.868 1.000 0.500 204 73.9 276 ERRMC BURIED . . . . . . . . 0.442 1.000 0.500 96 81.4 118 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.000 0.000 0.000 0 0.0 320 ERRSC RELIABLE SIDE CHAINS . 0.000 0.000 0.000 0 0.0 286 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 184 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 224 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 96 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.731 1.000 0.500 300 46.9 640 ERRALL SECONDARY STRUCTURE . . 0.459 1.000 0.500 172 48.3 356 ERRALL SURFACE . . . . . . . . 0.868 1.000 0.500 204 45.5 448 ERRALL BURIED . . . . . . . . 0.442 1.000 0.500 96 50.0 192 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 64 71 72 74 75 75 80 DISTCA CA (P) 80.00 88.75 90.00 92.50 93.75 80 DISTCA CA (RMS) 0.51 0.66 0.70 0.92 1.20 DISTCA ALL (N) 256 281 290 298 300 300 640 DISTALL ALL (P) 40.00 43.91 45.31 46.56 46.88 640 DISTALL ALL (RMS) 0.51 0.63 0.75 0.96 1.14 DISTALL END of the results output